EMLSAP00000003718, EMLSAP00000003718 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000003718
Unique NameEMLSAP00000003718
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length2121
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002126CadherinPRINTSPR00205CADHERINcoord: 328..341
score: 39.41
coord: 309..328
score: 35.41
coord: 167..186
score: 33.02
coord: 634..651
score: 45.31
coord: 226..255
score: 34.65
coord: 294..306
score: 30.13
coord: 490..516
score: 28.58
IPR002126CadherinSMARTSM00112CAcoord: 1137..1216
e-value: 1.4E-10
score: 51.1
coord: 1452..1515
e-value: 0.09
score: 14.5
coord: 1928..2005
e-value: 5.7E-15
score: 65.7
coord: 1725..1804
e-value: 2.3E-14
score: 63.7
coord: 248..328
e-value: 1.1E-21
score: 88.1
coord: 1034..1116
e-value: 6.9E-11
score: 52.2
coord: 930..1010
e-value: 6.2E-8
score: 42.4
coord: 143..224
e-value: 6.8E-23
score: 92.1
coord: 457..540
e-value: 7.5E-22
score: 88.6
coord: 1519..1596
e-value: 2.2E-10
score: 50.5
coord: 1247..1330
e-value: 4.2E-14
score: 62.8
coord: 1620..1701
e-value: 1.0E-6
score: 38.3
coord: 729..806
e-value: 0.0098
score: 24.3
coord: 352..431
e-value: 6.1E-17
score: 72.3
coord: 815..903
e-value: 0.2
score: 10.9
coord: 564..650
e-value: 2.0E-23
score: 93.9
coord: 1354..1429
e-value: 1.2
score: 2.9
IPR002126CadherinGENE3D2.60.40.60coord: 807..901
e-value: 5.0E-7
score: 29.5
IPR002126CadherinPFAMPF00028Cadherincoord: 1123..1194
e-value: 5.3E-8
score: 32.8
coord: 127..217
e-value: 4.6E-20
score: 71.5
coord: 1708..1781
e-value: 7.3E-9
score: 35.6
coord: 910..1002
e-value: 5.9E-7
score: 29.5
coord: 335..424
e-value: 4.5E-14
score: 52.3
coord: 231..321
e-value: 9.8E-17
score: 60.8
coord: 441..532
e-value: 2.8E-19
score: 69.0
coord: 1020..1107
e-value: 5.0E-16
score: 58.6
coord: 1606..1680
e-value: 6.0E-10
score: 39.1
coord: 1241..1320
e-value: 1.4E-10
score: 41.1
coord: 1509..1591
e-value: 6.3E-15
score: 55.0
coord: 548..643
e-value: 3.6E-16
score: 59.0
coord: 1911..1989
e-value: 3.5E-12
score: 46.3
IPR002126CadherinGENE3D2.60.40.60coord: 902..1008
e-value: 3.2E-17
score: 62.4
coord: 1597..1699
e-value: 8.8E-17
score: 61.0
coord: 1513..1596
e-value: 4.8E-16
score: 58.6
coord: 327..429
e-value: 6.9E-24
score: 84.0
coord: 538..654
e-value: 1.6E-27
score: 95.7
coord: 430..537
e-value: 5.9E-27
score: 93.9
coord: 113..223
e-value: 1.5E-26
score: 92.6
coord: 1700..1803
e-value: 3.7E-22
score: 78.4
coord: 1009..1107
e-value: 2.3E-24
score: 85.5
coord: 224..326
e-value: 3.2E-30
score: 104.4
coord: 1115..1214
e-value: 2.5E-14
score: 53.1
coord: 705..806
e-value: 5.0E-7
score: 29.5
coord: 1215..1330
e-value: 2.9E-21
score: 75.5
coord: 2004..2085
e-value: 2.8E-11
score: 43.2
coord: 1906..2003
e-value: 4.4E-19
score: 68.4
IPR002126CadherinGENE3D2.60.40.60coord: 1431..1510
e-value: 1.7E-8
score: 34.4
coord: 1331..1418
e-value: 1.9E-11
score: 43.9
IPR002126CadherinGENE3D2.60.40.60coord: 1804..1884
e-value: 8.7E-8
score: 32.0
IPR002126CadherinPROSITEPS50268CADHERIN_2coord: 122..226
score: 25.611
IPR002126CadherinPROSITEPS50268CADHERIN_2coord: 1599..1703
score: 16.754
IPR002126CadherinPROSITEPS50268CADHERIN_2coord: 331..435
score: 23.857
IPR002126CadherinPROSITEPS50268CADHERIN_2coord: 1516..1598
score: 16.228
IPR002126CadherinPROSITEPS50268CADHERIN_2coord: 227..330
score: 27.167
IPR002126CadherinPROSITEPS50268CADHERIN_2coord: 1432..1507
score: 8.708
IPR002126CadherinPROSITEPS50268CADHERIN_2coord: 543..652
score: 23.945
IPR002126CadherinPROSITEPS50268CADHERIN_2coord: 1704..1806
score: 20.152
IPR002126CadherinPROSITEPS50268CADHERIN_2coord: 812..905
score: 9.541
IPR002126CadherinPROSITEPS50268CADHERIN_2coord: 906..1012
score: 19.911
IPR002126CadherinPROSITEPS50268CADHERIN_2coord: 1013..1118
score: 18.267
IPR002126CadherinPROSITEPS50268CADHERIN_2coord: 1907..2007
score: 21.796
IPR002126CadherinPROSITEPS50268CADHERIN_2coord: 436..542
score: 24.098
IPR002126CadherinPROSITEPS50268CADHERIN_2coord: 1119..1218
score: 18.376
IPR002126CadherinPROSITEPS50268CADHERIN_2coord: 706..808
score: 12.457
IPR002126CadherinPROSITEPS50268CADHERIN_2coord: 1333..1431
score: 9.761
IPR002126CadherinPROSITEPS50268CADHERIN_2coord: 1219..1332
score: 19.231
NoneNo IPR availablePANTHERPTHR24026FAMILY NOT NAMEDcoord: 17..2082
NoneNo IPR availablePANTHERPTHR24026:SF14SUBFAMILY NOT NAMEDcoord: 17..2082
IPR020894Cadherin conserved sitePROSITEPS00232CADHERIN_1coord: 1206..1216
IPR020894Cadherin conserved sitePROSITEPS00232CADHERIN_1coord: 1000..1010
IPR020894Cadherin conserved sitePROSITEPS00232CADHERIN_1coord: 1995..2005
IPR020894Cadherin conserved sitePROSITEPS00232CADHERIN_1coord: 214..224
IPR020894Cadherin conserved sitePROSITEPS00232CADHERIN_1coord: 640..650
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 318..430
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 1905..2007
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 801..887
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 1212..1332
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 1696..1796
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 1320..1420
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 2000..2083
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 421..557
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 125..218
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 899..1012
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 1431..1509
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 1592..1703
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 1006..1107
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 1514..1592
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 220..322
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 1794..1908
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 723..819
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 1114..1218
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 530..659

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000003718 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000003718EMLSAT00000003718-699565Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000003718 ID=EMLSAP00000003718|Name=EMLSAP00000003718|organism=Lepeophtheirus salmonis|type=polypeptide|length=2121bp
MHGTLSTLCDLRFQSISNREINITASDGQHFSDVMSVKISLLKDSSLLTL
RRKLNQISSNSNKSLLLSCKDADIPRMLSNIIALEDVNNMEASKVDGNPI
VTDFRIDSIKMEVNIHPPVIINNYPSNITVKEATPIGTKLFQVQANDRDL
GFNGLLLYVISSGDYGSNFRIDTYCGDLYVDGKLDRESISLYELTITVFD
QGLPQKSSLITLYINVEDNNDNPPIFFKSSYSYLIPENVKVGSIIASVNA
KDIDEGLNGRVQYSIKSKTNDFLINSDTGIIKVNSILDREKIEVYDIIIA
AKDSNPINPLISFTIVRIKILDINDEQPIFTTANYFAKVPEDIPIGTVIG
TVNAYDPDLYDGGKVMYRFEEATSKFYVGPESGVIKLTDKLNFETKPIYN
ICIIGFDRGYPSLTSKTYFLIEVQDINENYNSPFFDSFFVSATIKENETP
GTFVFQVQAKDADFPHTINSQITYSIRNGSGLGIFSIDSKTGSIYTCTSL
DRETKKDYWITIYAQDQGLVPLYTSLDIYILILNVNDNVPYSNNFSTVVN
IQENSRPYTKLLTIEAFDDDAEDDYSKFQIISFYIIGEDPYSLFQINSTS
GVITTTRRILDREAQKEHILQIMISDSGSPPLNSTVIVIINVTDVNDNKP
QFLEKFYNLKILPPVLSFTYIRDKHFDSKAIGNKSFRYMSPTLGQSNTEL
YSSLFNKESWKFDVTKDNIGQIRIPLFRAIAFDLDGDSDIIYSVKSSSFS
EIFTIDQHNGVIYATEILNPVEKFDLIVRAQDKDGKYGLAWASLQIFDTN
LNKNEPIFIEPISPVQVLESDSIGRLLTVILVQGNNLNFFYITSGDDKKY
FYVTVDKGSVILAKQLNYSKQKSFNLTITVWNGYDVLDTYLSIEVLENNE
NGIQFEKDEYNVSVSENADIGXTVLTALDINIVSSSRRPIFSLYYTKDPS
SRNKFIVNPVNGAVILKNTLNREVIEYHYLVVSVKDQINPSKMDFTKIRI
FVMDHNDNSPKFMVASLTTKLLENIEIGGFVAQVIAVDNDVGLNGQVLYT
IESGNVGNSFIIDSNIGIIRVSKKIDLTVQGEYMLNVRATDQGEFKHSST
VQVHILIITPDNYISPIRKMSGYSVELNENEPIGTYVLQIKAESSYPLKY
DILPGYENHHLKFSVQPSTGILITSSALDYEDQTFYHIVVSVEDIFGFCT
NVTMDIYIVDLNDNIPYFLFSEYYGFISETASVHSLILTEDGKPLQIRAQ
DHDSGINSFIKFDIMEDIYKDVFSVESNTGVVRSLINFDHEFIADYTFNV
ILSDCGNPSLSSEVYASIKIHIIDENDTPPIFLQSTYISQLSLPLYSGVK
VIQIQALDRDGDSELEYKISENNSNFIIDSKSGNIFVRSTMGLDNLASKY
DFKATVSDGKYNNSCSIIVHFKKSVSSGLAFGKTSYNGTVIENTTRPDVV
LILTVLGTSLNENIIFKILGGHKYFSIGRTSGTIKTTGAPFDREVKDKYE
FIVEASSGEKRKNPRITHVSAVDNDSGSNGVVYYQLTKGNGDMFQVNRSN
GNIFLRKYVEMQDDEYFLTVAAYDGGNPPLSSDVLVVIKVLNEVMPLFEE
QLYRKTIPENLRAFTPILSVNAITNSLYNESRIAYIIESGNEDELFEIDF
DTGAVMIEKDYLDYETKAHYXIXVXAIDTYHGHFANAIILLDIENINDCI
PMFDNSSYFIEVEESISVGTSLITVSAFDADNYELSYYIHDNVTYEYLFI
NASSGEVTLKKLLDYELQTEHKFILSVRDKDDLITLTSDVEFFVKIININ
DNAPFFEEEEYFMTYCGSRAHRGQFIGMVRAVDIDGDVPLKYSIAGDTTH
QIVSIDNVSGMVFISKLRQLNSSTGTINVTVTDGVYSNYAIIWILQYWSN
YETLSFLRITYNLEVDEDIPEGTLITTITASEKNRVVNLRYSILSDIHKK
IFRIDSQTGELYTLKKFDRELVALYEVSIMCSDTSGRNGFTTLKLALRDI
NDNPPKFELSEYKFNIHLNASVGYVIWFIRTYDLDINSSIEYSIHEINES
LEVTFLFGINNDGKLFLKNRLMDQEIRTYNFLLTMQMEKQILVLLRSIVD
QEMKMVSLELLKKALWRYQNF
back to top
Add to Basket