EMLSAP00000004029, EMLSAP00000004029 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000004029
Unique NameEMLSAP00000004029
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length393
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360RRMcoord: 267..340
e-value: 0.059
score: 17.5
coord: 183..253
e-value: 0.07
score: 16.9
coord: 82..155
e-value: 4.7E-11
score: 52.7
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 184..237
e-value: 3.1E-6
score: 26.5
coord: 83..148
e-value: 1.6E-10
score: 40.3
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 81..159
score: 15.221
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 266..344
score: 8.979
IPR012677Nucleotide-binding, alpha-beta plaitGENE3D3.30.70.330coord: 281..341
e-value: 1.1E-6
score: 28.4
IPR012677Nucleotide-binding, alpha-beta plaitGENE3D3.30.70.330coord: 159..231
e-value: 2.5E-6
score: 26.9
coord: 59..158
e-value: 3.1E-18
score: 65.4
NoneNo IPR availablePANTHERPTHR24011:SF130SUBFAMILY NOT NAMEDcoord: 31..228
NoneNo IPR availablePANTHERPTHR24011FAMILY NOT NAMEDcoord: 31..228
NoneNo IPR availableSUPERFAMILY54928RNA-binding domain, RBDcoord: 80..232
NoneNo IPR availableSUPERFAMILY54928RNA-binding domain, RBDcoord: 281..345

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000004029 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000004029EMLSAT00000004029-699876Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000004029 ID=EMLSAP00000004029|Name=EMLSAP00000004029|organism=Lepeophtheirus salmonis|type=polypeptide|length=393bp
MSEAAEDPREEENFDDLYESSAGNEKGELKRGYPLECDHSLLSLDEQVEL
KKIKSMPESLTQLKPLPEEESKSGKSHENASKIYVGGXPANLSEGPLGEY
FSVFGEIQDLVLVRDYATRISKGYAFIXFREEAYALNALKAPSHNLENCH
SMRVSPATSKSDPDSKKVSLPPTEDIILPDQKRIYIGPLFENISNEDIRL
ELKSYGNVKAITRHPKTTHHQGYCAIEFTESISLRRIFGQKISLGNISRI
KVTCSRFIIELLLSPNVVFFHEAYLKCEHIHLEKYFTQFGKVFRTMQFYD
SYKTRFKSFGFVDYVDSAAVDRTMENRSQLIYPGQFVRVTKYLPAHLLLN
MSAIGDKDAQSVLRSLEPIIPESGIWGEGASKFNLTHKKECII
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