EMLSAP00000004637, EMLSAP00000004637 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000004637
Unique NameEMLSAP00000004637
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length2460
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1286..1307
NoneNo IPR availableCOILSCoilCoilcoord: 2074..2095
NoneNo IPR availablePFAMPF13909zf-H2C2_5coord: 754..773
e-value: 0.026
score: 14.6
NoneNo IPR availablePANTHERPTHR24208FAMILY NOT NAMEDcoord: 2..2392
NoneNo IPR availablePANTHERPTHR24208:SF39SUBFAMILY NOT NAMEDcoord: 2..2392
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 426..465
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 507..555
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 1035..1059
coord: 1105..1130
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 2356..2396
IPR001356Homeobox domainSMARTSM00389HOXcoord: 1805..1867
e-value: 2.0E-20
score: 83.9
coord: 2081..2143
e-value: 2.7E-17
score: 73.4
coord: 1587..1649
e-value: 1.7E-12
score: 57.5
coord: 2279..2341
e-value: 3.2E-14
score: 63.2
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 2280..2336
e-value: 4.9E-15
score: 54.7
coord: 1588..1644
e-value: 2.9E-9
score: 36.2
coord: 1806..1862
e-value: 3.3E-17
score: 61.7
coord: 2082..2138
e-value: 5.2E-17
score: 61.0
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 2079..2139
score: 16.941
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 2277..2337
score: 15.062
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 1803..1863
score: 17.329
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 1585..1645
score: 12.908
IPR003604Zinc finger, U1-typeSMARTSM00451ZnF_U1coord: 805..839
e-value: 4.1
score: 7.3
coord: 520..554
e-value: 6.8
score: 5.6
coord: 2359..2391
e-value: 7.2
score: 5.4
coord: 694..728
e-value: 0.7
score: 13.4
coord: 1034..1068
e-value: 0.25
score: 17.0
coord: 432..466
e-value: 0.85
score: 12.8
coord: 1107..1141
e-value: 7.5
score: 5.2
IPR015880Zinc finger, C2H2-likeSMARTSM00355ZnF_C2H2coord: 1037..1061
e-value: 0.27
score: 20.3
coord: 753..777
e-value: 0.99
score: 18.4
coord: 2154..2179
e-value: 27.0
score: 9.4
coord: 523..547
e-value: 0.075
score: 22.2
coord: 1921..1943
e-value: 0.026
score: 23.7
coord: 2360..2384
e-value: 36.0
score: 8.3
coord: 380..403
e-value: 0.0065
score: 25.7
coord: 1342..1365
e-value: 0.062
score: 22.4
coord: 142..165
e-value: 77.0
score: 5.4
coord: 808..832
e-value: 2.4
score: 17.1
coord: 697..721
e-value: 2.1
score: 17.3
coord: 1110..1134
e-value: 1.2
score: 18.1
coord: 435..459
e-value: 3.1E-4
score: 30.1
coord: 935..958
e-value: 13.0
score: 12.3
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3D3.30.160.60coord: 433..461
e-value: 4.1E-6
score: 25.6
coord: 1035..1063
e-value: 3.2E-4
score: 19.6
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3D3.30.160.60coord: 1108..1130
e-value: 7.0E-5
score: 22.1
IPR009057Homeodomain-likeGENE3D1.10.10.60coord: 1791..1857
e-value: 1.2E-19
score: 69.5
coord: 2267..2331
e-value: 4.9E-19
score: 67.5
coord: 1580..1637
e-value: 4.9E-14
score: 51.5
IPR009057Homeodomain-likeGENE3D1.10.10.60coord: 2060..2138
e-value: 3.3E-17
score: 62.0
IPR009057Homeodomain-likeSUPERFAMILY46689Homeodomain-likecoord: 1586..1657
IPR009057Homeodomain-likeSUPERFAMILY46689Homeodomain-likecoord: 2075..2138
IPR009057Homeodomain-likeSUPERFAMILY46689Homeodomain-likecoord: 1784..1863
IPR009057Homeodomain-likeSUPERFAMILY46689Homeodomain-likecoord: 2268..2336
IPR007087Zinc finger, C2H2PFAMPF00096zf-C2H2coord: 381..403
e-value: 0.0072
score: 16.4
coord: 435..459
e-value: 0.013
score: 15.6
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 2362..2384
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 144..165
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 1039..1061
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 1344..1365
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 1923..1943
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 1112..1134
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 382..403
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 1037..1066
score: 9.993
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 1921..1948
score: 10.18
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 1342..1365
score: 9.037
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 435..464
score: 8.85
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 1110..1139
score: 9.785
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 2114..2137
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 1620..1643

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000004637 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000004637EMLSAT00000004637-700484Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000004637 ID=EMLSAP00000004637|Name=EMLSAP00000004637|organism=Lepeophtheirus salmonis|type=polypeptide|length=2460bp
MLSAEEEHDEPMITDENEDVAKFDGKIVYNPDGSAYILEDDNLDILLPKH
DGSIIDRSGASPVDEYLPIANAFYVSKGDGNTNLYNALVKNASTDGSNAP
VVHSYRVYSARGGVDLKTRGCALSSSSKVPLSLLSVPIKPILMCFICKLS
FGCSKSFMNHGVSDHDILLTEEERSILDSKHSSAIIQTSGKNKEALVSFL
EPVNPDKSSSSGAISSPNSSSSFSKVPPPSLCNDSDPNGPASSYMRPPSV
KSHSEVDNFSSAASQLGARRTPDSERSCSGATPNEMAAAMMAXAAAAXRK
XPXGXISPAMTVPSSLSSPSPIAFPTNANMLQGTTIGACPDHVNGRPTGI
ECPKCDLILNASRMPGGIAWNTSRNSCKTLKCPKCNWHYKYQETLEIHMK
EKHPDNETTCIYCITGQQHPRLARGETYTCGYKPYRCEVCNYSTTTKGNL
SIHMQSDKHLNNMQELQNGGGSVPPSSSSAGGPLENNNSSSPNSPKVNPP
LSSPSIAVSSPQNTISSVPKPNWRCDICNYETNVARNLRIHMTSEKHTQN
VLALQQNAKNISALTHQMSNPVGGPTDPKQQLLQGFGLLAAAXASSNPDA
SAMADLAYXQALLTQLIQQQQSMGLLPNDHHVQDVMMNNEAVLPPKPEVD
PNPRYLFTCCVCNDFGSDSLEPLSAHLSSDRTKSRENEVSLVIAGNYLCQ
LCNYKTNLKANFQLHCKTDKHLQRLNHVNHIKEGGPGNEWKLRFLSNVNP
VELRCNACDFFTNSPHKLQVHVASQQHQISSXLFAHLQKSEERLNSSFGK
EGGEDLNYECLLCQFSAKGKHLLLNHVRSMKHLQMEQIHQLQKRAEGNLS
QTDIGDIFRVSDDRGSSNKLKSHHHHQHHQQQGAEELTTSSTSSVSNHHH
THNNSDHKTEKRTRNNSNNHNNNNNTKSSPTTSPSSCPLCSEKXTGQDSL
EDHASAVHSVNAEGIARLQSLINGSHWLNNENKQVKESSEEENMEVDEES
KGSHNDEGPSSSSPFQDHSNCSPSSPSDKYQDPSRPFKCDICRESFTQKN
ILLVHYNSVSHLNQLKKSSTSDTQQPLSIPTPEKSPSKGSALEALLGNIK
KDTDDEVKPYKCNICKVAYTQGSTLDIHIRSVLHQTKASKLQELILSGQI
DLSKPLIEQPDPQQIQDQHKKMLTDMLSPKSLNSTGSSNPQSSPNVRSSS
PINQSSPQSSPLATSLSQKNASSPEEHHHESANPDAIANFVKNFMPGGDG
KAVAAALSSIPDAKKASSPVLKNLLSNFGFDFMMQFNDIQQKKARIEEEE
ESEETTMSRLSPKKSSSSVEEEDKKFMTNEQNRSLDSEAFRYPCPICKKG
FLSSWSLKSHTDEAHKDIITQELLEKYIDKLRSEQNHLDEEMPVETAPKE
HSSISREDXSPQSPSVRXSXPHATPQQPPNLLEMQEVIQRAMMQQMNPMM
MQMAQLQGLNPLAAMNLYPPLIPPGLLPGSQNMHGGMLDPKVLALMAXGS
NKSPEELKNLNPHAAFMQMLAQQQQQQQQTASSLAGNNKMPQIPPMEPFS
FPPTPPDAHHLPKQSASLSNQSQQPAPVTTPSQETGGKRARTRISDDQLK
ILRSHFDINNSPAEETLNLMSSQTGLPLKVIKHWFRNTLFKERQKNKDSP
YNFSNPPSTKLNLEEYEKSGETKITPLKPEEQGEYIQNELKKEVEPEVTK
NEAKIARASSPESNISDSNHSKTDIPSDSNGSSNLTLSRLLAAGGSPLPP
NLLPNFPAFPTNPAAMPNYLSNLANRMSQEMNNSVPRPHSPQQSCGGSQT
NSSGKRANRTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLGLSPRVIV
VWFQNARQKARKIYENQPAGNECSPVAXNTSSSSVSGAVGATVAXXSNNN
ADSXSEQNNAGRFTRTPGLNYQCKKCLLVFQRYYELIRHQKQHCYKEEDA
KRSAQAQKAAGVAAAQYVGQYNSNNSEDSNHSNDRSVHSPLVNEEDLVRQ
YVGNNPFLSGAFQQQSQHQQQSQALNQQQTSNHHSGHDEEIDEDMENESD
ENSLCSTPSSSKRKLSDDGTELDAEELQNREKRLRTTITQEQLDFLYQKY
QSESNPSRKSLEQIAGQVGLRKRVVQVWFQNTRARERKGLYIKPELNHDE
NFLMKCPMCPNVSPFKSRLSWESHIGTYHPDLMENDDVVVPDSIASLIPN
SASAYNLQSSMRKYYEDTMKRFMNDMQENNKEQGVGVAVGGGAVGALDLT
SSDMETLSDHILDEDRDPNGDSSSQYGGNKRFRTQMTGLQIKMMKAIFEN
YKTPSMSECHGLGKEIGLQKRVVQVWFQNARAKEKRAKLQYSQSNGGIEP
PQESVPPVPDECHICSYKYGSHXSVQDHIFSKSHLDKLRTALEAGLYEPE
SPGQIITGGVVAAGGNTNVSSGGNTPLGGGGGEPLQMLQINNRDLLDMTS
RSNNRMMMQV
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