EMLSAP00000005702, EMLSAP00000005702 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000005702
Unique NameEMLSAP00000005702
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length1626
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490HELICccoord: 445..542
e-value: 8.7E-10
score: 48.5
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 485..541
e-value: 2.1E-13
score: 49.8
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 410..587
score: 13.248
IPR003100Argonaute/Dicer protein, PAZ domainSMARTSM00949PAZcoord: 895..1044
e-value: 2.9E-5
score: 27.8
IPR003100Argonaute/Dicer protein, PAZ domainPFAMPF02170PAZcoord: 910..1041
e-value: 1.8E-13
score: 49.8
IPR003100Argonaute/Dicer protein, PAZ domainPROSITEPS50821PAZcoord: 918..990
score: 12.265
IPR000999Ribonuclease III domainSMARTSM00535RIBOccoord: 1377..1547
e-value: 1.2E-34
score: 131.1
coord: 1086..1313
e-value: 1.4E-5
score: 34.5
IPR000999Ribonuclease III domainGENE3D1.10.1520.10coord: 1088..1164
e-value: 2.5E-21
score: 75.2
coord: 1256..1301
e-value: 2.5E-21
score: 75.2
IPR000999Ribonuclease III domainGENE3D1.10.1520.10coord: 1362..1455
e-value: 3.3E-41
score: 139.6
coord: 1496..1540
e-value: 3.3E-41
score: 139.6
IPR000999Ribonuclease III domainPFAMPF00636Ribonuclease_3coord: 1398..1525
e-value: 6.7E-20
score: 71.5
coord: 1104..1292
e-value: 6.4E-14
score: 52.2
IPR000999Ribonuclease III domainPROSITEPS00517RNASE_3_1coord: 1398..1406
IPR000999Ribonuclease III domainPROSITEPS50142RNASE_3_2coord: 1362..1525
score: 34.873
IPR000999Ribonuclease III domainPROSITEPS50142RNASE_3_2coord: 1088..1155
score: 14.486
IPR000999Ribonuclease III domainSUPERFAMILY69065RNase III domain-likecoord: 1505..1541
coord: 1361..1455
IPR000999Ribonuclease III domainSUPERFAMILY69065RNase III domain-likecoord: 1088..1161
coord: 1272..1301
IPR014001Helicase, superfamily 1/2, ATP-binding domainSMARTSM00487DEXDccoord: 50..249
e-value: 9.1E-20
score: 81.7
IPR014001Helicase, superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 61..240
score: 18.928
NoneNo IPR availableGENE3D3.40.50.300coord: 407..570
e-value: 5.2E-21
score: 74.3
NoneNo IPR availableGENE3D3.40.50.300coord: 53..221
e-value: 2.1E-33
score: 114.7
NoneNo IPR availablePANTHERPTHR14950:SF3DICER-1coord: 52..1626
NoneNo IPR availablePANTHERPTHR14950HELICASE-RELATEDcoord: 52..1626
IPR011545DNA/RNA helicase, DEAD/DEAH box type, N-terminalPFAMPF00270DEADcoord: 58..222
e-value: 2.4E-17
score: 62.8
IPR005034Dicer dimerisation domainPFAMPF03368Dicer_dimercoord: 621..721
e-value: 6.7E-20
score: 70.5
IPR005034Dicer dimerisation domainPROSITEPS51327DICER_DSRBFcoord: 621..725
score: 27.084
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 99..255
coord: 410..554

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000005702 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000005702EMLSAT00000005702-701549Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000005702 ID=EMLSAP00000005702|Name=EMLSAP00000005702|organism=Lepeophtheirus salmonis|type=polypeptide|length=1626bp
SAHSSRDSSPNYDKTTSPIHEYILPHHCKKLSCSFHSSYNYTLVRLLFTI
RMEPRNYQLELFDIAKDQNSIVYLGTGSGKTFIAIMMIKEFYGGXKNEEK
KIVMVVPSLPLAHQQSRVIDEQCKFARVGKIVGEDGVDLWDSSKWNEVIN
SLDIIVXIHQVLLDSLSHSFLTLSNISLLIFDECHHTFKDNPYNMIMKEH
YLTLKSTHPHKVPHILGLSASVVISQCDDELKFLREKKILEANLDSKIIT
TMDLDNYLRFVTQPHECLKQYHAPSLGTDISNIVDDGLIKIENEFENHII
FLKQEMRDSKDKISLLTTRAKSKKKLFNRTLNDISMLYNTLGMFAARIYV
YTMLQDTFPEIKLRCDEKYQFKLLQIVYDTFKSVEGIFQRKWNDFVGSDL
QKMYYFMSSKLKKLLEIFTEFVTDSQFSMQSFTAVVFVKRRESCKIIYEV
LKEILRLDSRFSFISPAYIIGQSMVELNPGSNEMKKMQDTITNFRSGRYN
LIVSTSVLEEGMDIKKCNLVIRFDEIDTYRSYVQSKGRARAKPSMYVIMC
STTDLPTMDMKLSSFRKIEQMSITECHTLPFELQKLNDFHEENEDNEEEE
DPYFVNPNDKTNSAMISPATSISLLHQYINSITTDKFTTLAPYWEYSRTT
SKPHNILLSVLEEPKYVCQVTLPHKTPLNFPVKGALRASRKKAKRSAALQ
ACTMLHQLGELDDKLIPKKKRIHEELEELDDGLDDDEDHAKPGTKRFRRY
YAQKKPLLSSSPILCASKVFIYTIDMHLVSITKHNPKRYSLYYPQETERK
LGLCLISPLSDIVMSNKITLYSRSGIVEVNILLANSHISGSTLVEKCGGL
NTLQKYTKLIYSDVLQVVTPWMEELTEKELLECRDPLIVPLLNGEIDKDF
ILKTISGQPYNDGDMTERVVSLLHKPDPQRYFVEEVIPELTPLSLINENT
TFVEYYSQKYGMKITDKSQPLIRLSNADAERFAYSEVVIEEKDNKLTKLG
NLDFYRTRWLAIPELVLAHSVPSSFWKDLKLLPYILERINQIQNSMTLLK
ELCSFEKGEPCSNKDLSFDFLTDLNSDAQTLSFNHFELFKSLTLTNAGEE
FDLERNEILGDAFLKIMTSIYLYFAINSKDEGYLSLYRSRIVGNRNLLRV
GEMIGDLQLGGVLNAVKLQPKLNWQVPFYNNLKSLEEEIVKMNRDFRKTV
LTSNEKFKSHNFLDGMNNSDLSRLKEILCCDNPNTSIFYNDIVNKLSEAR
GNTNYSESKAQLSSLRVFVPVNDKSIADALESIIGVYLLHYGCKATLRMM
ATKMGISLFPNVKVENNICGHSKLKVSQSLNWFVPPTNAIQDFGKKVVNH
EILNRLLLKLQYKTIEKIIGYEFKEKTFLLQAFTHSSFSSNKITDSYERL
EFLGDAILDYLVTSYIFIEFPTYGPGKVTDARSAVVNNVTLAILTIKSEL
YCHLLHSEPLILSRIDSMIANMEFDESNMNEFDFFKLKMSLLSETECPIL
EEVDVPKVLGDICESVLGAVFLDSGFDLKIVWNVFKRLCPNLDQIVALKP
KNYVTKLYELFPERISFGPSKKVGNKIEKTVSLRMKDDKVYKARGIGPKG
KIAKISACKCLIRGLVKIKELPSDVI
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