EMLSAP00000006689, EMLSAP00000006689 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000006689
Unique NameEMLSAP00000006689
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length214
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020479Homeodomain, metazoaPRINTSPR00024HOMEOBOXcoord: 196..206
score: 47.28
coord: 206..214
score: 71.64
coord: 181..192
score: 35.55
IPR001356Homeobox domainSMARTSM00389HOXcoord: 159..214
e-value: 4.3E-14
score: 62.8
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 160..214
e-value: 5.5E-20
score: 70.6
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 157..214
score: 19.046
IPR009057Homeodomain-likeGENE3D1.10.10.60coord: 150..214
e-value: 6.4E-24
score: 83.4
IPR009057Homeodomain-likeSUPERFAMILY46689Homeodomain-likecoord: 144..214
NoneNo IPR availablePANTHERPTHR24326:SF2SUBFAMILY NOT NAMEDcoord: 140..214
NoneNo IPR availablePANTHERPTHR24326FAMILY NOT NAMEDcoord: 140..214

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000006689 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000006689EMLSAT00000006689-702536Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000006689 ID=EMLSAP00000006689|Name=EMLSAP00000006689|organism=Lepeophtheirus salmonis|type=polypeptide|length=214bp
MQESRSVENDGGRNVRIKGLSVDSTHSSSKALPFSISSILNEKTSSPXPT
TTYIPPREQVYSEGEDDESDIRVDDDEDDEEEEEEEEEGTDRSLGFGRSQ
NSEXSNWLYRSSAFQQHFPGYMSLPPSLLGAKLGAGGGNPLMPQRRIGHP
YQNRTPPKRKKPRTSFSRLQICELEKRFHKQKYLASTERANLAKGLKMTD
AQVKTWFQNRRTKW
back to top
Add to Basket