EMLSAP00000006917, EMLSAP00000006917 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000006917
Unique NameEMLSAP00000006917
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length195
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001806Small GTPase superfamilyPRINTSPR00449RASTRNSFRMNGcoord: 7..28
score: 45.09
coord: 109..122
score: 48.15
coord: 30..46
score: 30.23
coord: 157..179
score: 32.23
coord: 47..69
score: 43.22
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 8..180
e-value: 1.1E-51
score: 174.3
IPR003578Small GTPase superfamily, Rho typeSMARTSM00174RHOcoord: 9..182
e-value: 1.3E-122
score: 423.3
IPR003578Small GTPase superfamily, Rho typePROSITEPS51420RHOcoord: 1..179
score: 26.422
IPR020849Small GTPase superfamily, Ras typeSMARTSM00173RAScoord: 4..182
e-value: 1.6E-14
score: 64.3
IPR003579Small GTPase superfamily, Rab typeSMARTSM00175RABcoord: 7..182
e-value: 1.2E-13
score: 60.7
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 6..160
e-value: 8.5E-36
score: 121.0
NoneNo IPR availableGENE3D3.40.50.300coord: 6..183
e-value: 2.5E-62
score: 209.0
NoneNo IPR availablePANTHERPTHR24072RHO FAMILY GTPASEcoord: 4..194
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 6..179

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000006917 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000006917EMLSAT00000006917-702764Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000006917 ID=EMLSAP00000006917|Name=EMLSAP00000006917|organism=Lepeophtheirus salmonis|type=polypeptide|length=195bp
MSSGRPIKCVVVGDGTVGKTCMLISYTTDSFPGEYVPTVFDNYSAPMVCD
GVPVSLGLWDTAGQEDXDRLRPLSYPQTDVFLITFSVVSPSSFENVTSKW
CPEIKHHCADAPILLVGTKIDLREDKETLQALADAGQAPIKREQGQKLCN
KIRAVKYLECSALTQRGLKQVFDEAVRSVLRPQPVRRRQKKCQIL
back to top
Add to Basket