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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR001030 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha | PRINTS | PR00415 | ACONITASE | coord: 308..321 score: 52.19 coord: 232..247 score: 49.11 coord: 218..231 score: 50.58 coord: 294..307 score: 48.83 coord: 516..529 score: 48.98 coord: 189..197 score: 45.12 coord: 389..403 score: 34.69 coord: 454..465 score: 59.35 coord: 165..178 score: 40.67 |
IPR001030 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha | PFAM | PF00330 | Aconitase | coord: 72..586 e-value: 4.1E-114 score: 381.5 |
IPR001030 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha | SUPERFAMILY | 53732 | Aconitase iron-sulfur domain | coord: 157..652 coord: 14..125 |
IPR006249 | Aconitase/iron regulatory protein 2 | TIGRFAM | TIGR01341 | TIGR01341 | coord: 159..904 e-value: 3.6E-285 score: 945.9 |
IPR015928 | Aconitase/3-isopropylmalate dehydratase, swivel | GENE3D | 3.20.19.10 | | coord: 663..902 e-value: 1.7E-52 score: 177.6 |
IPR015928 | Aconitase/3-isopropylmalate dehydratase, swivel | SUPERFAMILY | 52016 | LeuD/IlvD-like | coord: 658..904 |
IPR000573 | Aconitase A/isopropylmalate dehydratase small subunit, swivel | PFAM | PF00694 | Aconitase_C | coord: 714..840 e-value: 3.3E-30 score: 104.7 |
IPR015932 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 | GENE3D | 3.40.1060.10 | | coord: 265..384 e-value: 9.8E-32 score: 108.7 |
IPR015931 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 | GENE3D | 3.30.499.10 | | coord: 442..598 e-value: 1.4E-51 score: 173.9 coord: 385..410 e-value: 1.4E-51 score: 173.9 |
IPR015931 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 | GENE3D | 3.30.499.10 | | coord: 164..264 e-value: 1.1E-56 score: 191.1 coord: 33..127 e-value: 1.1E-56 score: 191.1 |
IPR015934 | Aconitase/Iron regulatory protein 2/2-methylisocitrate dehydratase | PANTHER | PTHR11670:SF1 | ACONITASE | coord: 13..911 |
IPR015937 | Aconitase/isopropylmalate dehydratase | PANTHER | PTHR11670 | ACONITASE | coord: 13..911 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000007801 ID=EMLSAP00000007801|Name=EMLSAP00000007801|organism=Lepeophtheirus salmonis|type=polypeptide|length=915bp MKEGPSSGTMEDEDLLKDFQVGERSYKYYDVTQIQGYEELPYSLRVLLEC AVRKRSETQGQVWKDVYERILRRVLLQDFTGVPALIDLAAIRESVSKSGG CPDVVDSLCPADLVVDHCVQVDYNQIKQQLSSPPDPSPKTPVLGDDICPF HQKMSYWADALRSNQTSEFERNKERFIFLKWVNSAFKNITVIPPGTGVMH QVNLEYLARVVTCQGGVLFPDSVVGTDTHTTMINGLGVLGWGVGTLDAQA VMFGHPVTLSFPRVVGIRIKGVISDYSTSTDLVLMITKKLRQAGVQGAFV EFFGPSLKELSVADRATISNMCPEYGALVGFFPIDEITIQYLAQSGRDKS HIETVEKYMKTVKMFRSSDENENIRFASIIEIDLSDIIPCVSGPKRTKDK VSINEIAADFKSALHLKEGPKGYGLSQGQGHVAFSVNIDGEYFTVGHGTV LLAAISSCTNTSNPSVMLGAGLLAKKAVECGLSVPKVVKTSLAPGSGVVT SYLQESGVMPYLYMLGFEIVGYGCSTCSYNSGPNLPDSIVQAIKQGNLVC CGLLSGNRNFEGRLDPDIRANYLASPLMVIAYAIAGRIDINLDREPLGFN SHTGEAIFLKNIWPSRQEIQEIERKLVIPGIYRQVYSKVSVGNKHWDSLS VPNSVDKFPWSSDSTYIKCPEYIKEIGSNARNWKNMRCLLKLGDNITSDH ISPAGSITRSSPAAEYLSSLGLAPREYNSYGARRGNYHVMVRGTFSNMRL QNHLLNKVGPYTLHLPSEVTTTIFEASERYKNDGVSLFAIGGKNFGRGTS RDWATRGPFLLGVRAILAVSFDPTYRSNLVKTGILPLQITSISYESLKGT ECLSIDIRDNITPKCLIDVVVGKAERSFKAVVRVDNDYETDVFHAGGVIA QIVSKTKDKTTCETA back to top
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