EMLSAP00000008071, EMLSAP00000008071 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000008071
Unique NameEMLSAP00000008071
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length508
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001723Steroid hormone receptorPRINTSPR00398STRDHORMONERcoord: 332..342
score: 45.9
coord: 431..447
score: 44.6
coord: 410..431
score: 36.93
IPR001628Zinc finger, nuclear hormone receptor-typePRINTSPR00047STROIDFINGERcoord: 287..302
score: 57.2
coord: 320..328
score: 57.99
coord: 328..336
score: 57.94
coord: 271..287
score: 59.51
IPR001628Zinc finger, nuclear hormone receptor-typeSMARTSM00399ZnF_C4coord: 268..339
e-value: 3.1E-36
score: 136.4
IPR001628Zinc finger, nuclear hormone receptor-typePFAMPF00105zf-C4coord: 270..337
e-value: 2.7E-29
score: 101.0
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS00031NUCLEAR_REC_DBD_1coord: 271..297
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS51030NUCLEAR_REC_DBD_2coord: 268..343
score: 19.261
IPR008946Nuclear hormone receptor, ligand-bindingGENE3D1.10.565.10coord: 332..486
e-value: 4.6E-42
score: 143.7
IPR008946Nuclear hormone receptor, ligand-bindingSUPERFAMILY48508Nuclear receptor ligand-binding domaincoord: 342..489
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 268..331
e-value: 5.2E-29
score: 99.9
IPR000536Nuclear hormone receptor, ligand-binding, corePFAMPF00104Hormone_recepcoord: 399..488
e-value: 1.1E-16
score: 60.4
NoneNo IPR availablePANTHERPTHR24084FAMILY NOT NAMEDcoord: 30..488
NoneNo IPR availablePANTHERPTHR24084:SF0SUBFAMILY NOT NAMEDcoord: 30..488
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 269..354

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000008071 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000008071EMLSAT00000008071-703918Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000008071 ID=EMLSAP00000008071|Name=EMLSAP00000008071|organism=Lepeophtheirus salmonis|type=polypeptide|length=508bp
MSRIIVMKIGQFGELWKIFDKVSPNGVSIEDNNSENNNNLSKNLLLDSTD
LSLHKSSPGGSSGGGKLLXQLLDTDPESSSERVHKGNKIGIALKNKILSS
SVGEDVLNSPPSPLDSLKGKNVCSPSTSVSTSFNRNDTSNNNXTITSSSE
EQDSIYLLNIIKDEAAPSYEDNEILYSLSNSSTMTLLQNNEMEIADSCEV
NANSPTTSMKDSDVHSSRDPLNXQLNVTTTTNIASYAPPGSPDHHLCSST
SETNLFSRDIIKEEEGQRRTCLVCGDIASGFHYGVSSCEACKAFFKRTIQ
GNIEYTXPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGR
QKYRRMIESSPYIQPPPKKTLEDNKLLQVLRHCEPEAFLVNMDMTLPNYK
IRTISTLSDFYNRELIGTIEWAKQIPGFSNLTINDQMKLLQSSWSEILVL
SLVYRSLPYNGKISLTNNFSLDESQARLCGLSEFFFQVWKPKYQCTKYTP
STAKYQAG
back to top
Add to Basket