EMLSAP00000008639, EMLSAP00000008639 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000008639
Unique NameEMLSAP00000008639
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length469
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000033LDLR class B repeatSMARTSM00135LYcoord: 156..199
e-value: 2.9E-6
score: 36.8
coord: 53..112
e-value: 3.0E-5
score: 33.4
coord: 113..155
e-value: 3.9E-11
score: 53.0
coord: 10..52
e-value: 3.9E-5
score: 33.1
IPR000033LDLR class B repeatPFAMPF00058Ldl_recept_bcoord: 133..174
e-value: 7.5E-6
score: 26.0
coord: 91..129
e-value: 2.5E-15
score: 56.3
coord: 30..70
e-value: 2.2E-7
score: 30.9
IPR000033LDLR class B repeatPROSITEPS51120LDLRBcoord: 30..72
score: 13.985
IPR000033LDLR class B repeatPROSITEPS51120LDLRBcoord: 1..29
score: 4.819
IPR000033LDLR class B repeatPROSITEPS51120LDLRBcoord: 178..192
score: 4.448
IPR000033LDLR class B repeatPROSITEPS51120LDLRBcoord: 133..177
score: 12.105
IPR000033LDLR class B repeatPROSITEPS51120LDLRBcoord: 89..132
score: 15.331
IPR011042Six-bladed beta-propeller, TolB-likeGENE3D2.120.10.30coord: 5..221
e-value: 1.2E-74
score: 250.5
NoneNo IPR availableGENE3D2.10.25.10coord: 222..262
e-value: 5.7E-11
score: 41.7
NoneNo IPR availablePANTHERPTHR10529LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATEDcoord: 1..401
NoneNo IPR availablePANTHERPTHR10529:SF151SUBFAMILY NOT NAMEDcoord: 1..401
NoneNo IPR availableSUPERFAMILY63825YWTD domaincoord: 7..213
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 217..262
NoneNo IPR availableTMHMMTMhelixcoord: 74..93
NoneNo IPR availableTMHMMTMhelixcoord: 331..353

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000008639 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000008639EMLSAT00000008639-704486Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000008639 ID=EMLSAP00000008639|Name=EMLSAP00000008639|organism=Lepeophtheirus salmonis|type=polypeptide|length=469bp
APIDEGNKKEVVVDHNIVIADGLACDWXYNHIYWTDTGTNSINLAEFDGR
LISTIIVDDLEEPRSIALHPAKGYVLYIAILVYFTFIFSWMFWSDWGEDP
KIERAGMDGSHRETIISETLRWPNGITLDLVLDKLYWIDAKLNIVGSSDL
DGSNSRVVYYSKQNLKHPFSISIFEDWMYWTDWERKAIFRANKFNGKDKQ
VPMVIHVYHPYRQKDSINHCLPLNGRCSHVCVPAPQFTKDSAKTACVCPN
GLRLSHDNLNCVHDPNYVPHRDSRLFKLSEKSQFNDSFHLSKYFNHNEYY
LGPRSSLNETYKKSEKNSQVVSPLPNGNNETAGFXAGXAIGIGAGXILLL
FLVRIHNPFPLYSYQYDMYLQVLMAIYRCFWYKSLQSINFDNPVYRKASE
EGNGSRGGRNSSSPGAALLGMTIEREQSSFPQRNLTTLTLSSDISEATEI
QPLNSNDTHVCSSEEVINS
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