EMLSAP00000009033, EMLSAP00000009033 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000009033
Unique NameEMLSAP00000009033
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length990
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase, superfamily 1/2, ATP-binding domainSMARTSM00487DEXDccoord: 143..326
e-value: 1.7E-29
score: 114.0
IPR014001Helicase, superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 155..315
score: 21.217
IPR001650Helicase, C-terminalSMARTSM00490HELICccoord: 377..479
e-value: 6.6E-14
score: 62.2
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 393..479
e-value: 1.0E-10
score: 41.2
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 350..519
score: 16.713
IPR007502Helicase-associated domainSMARTSM00847HA2coord: 539..629
e-value: 9.4E-17
score: 71.7
IPR007502Helicase-associated domainPFAMPF04408HA2coord: 540..629
e-value: 1.8E-15
score: 56.6
NoneNo IPR availableGENE3D3.40.50.300coord: 145..299
e-value: 1.7E-45
score: 154.0
NoneNo IPR availableGENE3D3.40.50.300coord: 347..497
e-value: 1.1E-13
score: 50.4
NoneNo IPR availablePANTHERPTHR18934ATP-DEPENDENT RNA HELICASEcoord: 61..914
NoneNo IPR availablePANTHERPTHR18934:SF68SUBFAMILY NOT NAMEDcoord: 61..914
IPR011545DNA/RNA helicase, DEAD/DEAH box type, N-terminalPFAMPF00270DEADcoord: 152..298
e-value: 5.3E-8
score: 32.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 147..683

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000009033 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000009033EMLSAT00000009033-704880Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000009033 ID=EMLSAP00000009033|Name=EMLSAP00000009033|organism=Lepeophtheirus salmonis|type=polypeptide|length=990bp
MTYKRRKSSDIRRERGSSRIFDFEKCRSKLCKIFFTERDLISRGSQDYDD
FWKFLRSYQCFQEKKRREGKGMEDADPRSGISFDLQPSDPKDLLNRIPYQ
DPDDYNILTESMIKEFQYIVSLYVDFLQREKLKKLKKLKESQSNLPISGY
RNEIIQSLVQKQVVIIAGDTGCGKSTQVPQFLLEAGYEKIACTQPRRLAC
IALANRVAYETLHQFGTEVGYQIRFEKKRTDKTRILFITEGLLLRQVLTD
PKLGSYNVVILDEVHERHLSGDFLLGIVKCLLRARDDLKVILMSATINID
LFLKYFALEEAPIIQVPGRLYPIELRYFPIPDVEQGDGLNPAPYIRILRL
IDQKYSKDDRGDVLIFLSGHKEIRIITDATKSYSEKSGGKWIVLPLHSSL
SLADQDKVFNYAPQGARKCIISTNIAETSITIEGVRFVVDSGKVKEMHYD
PYCKMRRLKEFWICNASAEQRKGRAGRTGPGVCFRLYSEKEKEALAKFSV
PEIQRVHLDSLVLQMISMGLPNARKFPFIEPPHPESLENAIITLKEQDAM
NEDETLTVLGSMLSNLPVDVTIGKMLIMGTLFYQVESVLSLAGALSIQSP
FTNDAYQNQECVAARKNLDSDHGDPITLLNSYREWLTVKSRNTENSRRWC
KTRGLEEQRFYELTKLRNQFKDILKDAGLVKPFNVLHPNSYFSNNPEFIS
VDGLDIVSVPGFPSKYSVSAKHQILIYMSLLETTKSYIMNPLRMPALPTL
LLFSKTMDTDKYISRIVFDSWIELRFPNPLMSQNQVVISFILRDSWNKLL
KSKLESDRNDKHFQDDLKSDGFILGDDLVDFIHHSEMNFSIRRLLPGDIK
VLYRPNNYEKVPESLVNPFVGEPKINSQKGGIQLNDVLTYDCIESLNDNI
AELTSNPSCVYCDETSYSHTLERMEHYRVCWKNNASKRKEGINRSNVEGG
ESSSNNKNGYFCDDCSKLLHLXSTGILRHKQKHRQEKEKT
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