EMLSAP00000010048, EMLSAP00000010048 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000010048
Unique NameEMLSAP00000010048
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length779
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 103..124
NoneNo IPR availableGENE3D1.20.1560.10coord: 9..222
e-value: 3.5E-29
score: 101.3
coord: 617..744
e-value: 7.5E-15
score: 54.2
NoneNo IPR availableGENE3D3.40.50.300coord: 245..474
e-value: 1.0E-82
score: 276.5
NoneNo IPR availablePANTHERPTHR24221:SF24SUBFAMILY NOT NAMEDcoord: 11..514
NoneNo IPR availablePANTHERPTHR24221FAMILY NOT NAMEDcoord: 11..514
NoneNo IPR availableTMHMMTMhelixcoord: 26..48
NoneNo IPR availableTMHMMTMhelixcoord: 622..644
NoneNo IPR availableTMHMMTMhelixcoord: 52..69
NoneNo IPR availableTMHMMTMhelixcoord: 129..151
NoneNo IPR availableTMHMMTMhelixcoord: 665..687
NoneNo IPR availableTMHMMTMhelixcoord: 732..754
IPR003593AAA+ ATPase domainSMARTSM00382AAAcoord: 272..467
e-value: 3.7E-20
score: 83.0
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 263..412
e-value: 1.9E-33
score: 115.5
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 245..482
score: 24.517
IPR001140ABC transporter, transmembrane domainPFAMPF00664ABC_membranecoord: 623..744
e-value: 1.7E-17
score: 63.6
coord: 3..160
e-value: 4.1E-45
score: 154.2
IPR017871ABC transporter, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 385..399
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 624..746
score: 17.322
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 1..205
score: 29.631
IPR011527ABC transporter type 1, transmembrane domainSUPERFAMILY90123ABC transporter transmembrane regioncoord: 10..222
IPR011527ABC transporter type 1, transmembrane domainSUPERFAMILY90123ABC transporter transmembrane regioncoord: 613..752
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 238..484

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000010048 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000010048EMLSAT00000010048-705895Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000010048 ID=EMLSAP00000010048|Name=EMLSAP00000010048|organism=Lepeophtheirus salmonis|type=polypeptide|length=779bp
MKLGTLLQRSLSMDLNKLQEGIGEKIGLFIFFITIFISSLITAFIHGWEL
TLVILSAMPILMIAVGIIAKSQTALTVKESNAYSKAGSVAEEAFSSIKTV
MSFQGQNTEIQRYKENLSEAQKTGILRGLLTGIGGGLMWFIIYSSYAIAF
WYGVKLILDDRESCIASPTDCQIRYGPSNLLIVFFSVLMGAMNIGQASPY
VEAFAIARGAASSVFQIIQSTPAIKSDYDHLQRQQDKAPPFTGRITFKNV
HFEYPSRPTVKVLSGLSFEASPGKTLALVGPSGCGKSTVIQLIQRFYDPS
FGVVSIDGEDITTLDPHWLRSHIGIVGQEPVLFEYSIKENITMGLQGEIS
EKMIDDTCKAANAYDFIQRLPKKYDTIVGEKGALLSGGQKQRIAIARALI
RNPSILLLDEASSALDSQSEFIVQSALDKARKGRTTIIVAHRLSTIRSAD
AILVMKDGYRVDYGTHESLKSNKTGLYCSLVNAQDCQVDQDEGLPLFNPE
LNYEEEDEVYDLEQVENEMNSMTYGSISGGSSWNRRHHFVRPTLERRHST
GSGYSEDSLKIEDALDVAGSAIGIARVGSRKIRRTSTNFTDNEYLEAEEM
KSVNSNVGFFTVLRENSKEWLYIFMGCIASVVMGASMPVYAHLFGEVLGV
LSKSIEEARVNSITYSMYFLLVGIIVGFSMFMQIFMFSLSGELLTTKLRI
KAFTAMLNQEVGWYDESVNSTGALCSRLSADASAVQGVINYLSFFIHLLY
ILIGNRKSFGHNNSSNTHNTHVYICCIIF
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