EMLSAP00000010890, EMLSAP00000010890 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000010890
Unique NameEMLSAP00000010890
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length302
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001452Src homology-3 domainPRINTSPR00452SH3DOMAINcoord: 264..273
score: 30.62
coord: 233..243
score: 46.48
coord: 247..262
score: 36.43
coord: 275..287
score: 40.23
IPR001452Src homology-3 domainSMARTSM00326SH3coord: 233..288
e-value: 7.9E-20
score: 81.9
IPR001452Src homology-3 domainPFAMPF00018SH3_1coord: 236..281
e-value: 4.7E-17
score: 61.0
IPR001452Src homology-3 domainPROSITEPS50002SH3coord: 230..289
score: 17.232
IPR001452Src homology-3 domainSUPERFAMILY50044SH3-domaincoord: 231..285
IPR018205VHS subgroupSMARTSM00288VHScoord: 12..143
e-value: 4.1E-43
score: 159.2
IPR008942ENTH/VHSGENE3D1.25.40.90coord: 10..146
e-value: 1.3E-43
score: 147.7
IPR008942ENTH/VHSSUPERFAMILY48464ENTH/VHS domaincoord: 12..146
NoneNo IPR availableGENE3D2.30.30.40coord: 233..285
e-value: 1.9E-20
score: 71.7
NoneNo IPR availablePANTHERPTHR13856VHS DOMAIN CONTAINING PROTEIN FAMILYcoord: 1..289
NoneNo IPR availablePANTHERPTHR13856:SF65SUBFAMILY NOT NAMEDcoord: 1..289
IPR002014VHSPFAMPF00790VHScoord: 9..143
e-value: 1.5E-35
score: 121.7
IPR002014VHSPROSITEPS50179VHScoord: 19..147
score: 38.859
IPR003903Ubiquitin interacting motifPROSITEPS50330UIMcoord: 170..189
score: 8.927

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000010890 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000010890EMLSAT00000010890-706737Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000010890 ID=EMLSAP00000010890|Name=EMLSAP00000010890|organism=Lepeophtheirus salmonis|type=polypeptide|length=302bp
MLGSLFGSSSLFDTEVERVTDEKNKREDWGLIMDLCDRVKATPNGSKECL
KSMSKRLNHPDPHVVMQCITLLDACVNNCGKSFMLEVASRDFENEFRKIL
SKSQPKVQNRLWCVLRKWAEGDFKKESQFSLIPSLYNSLKQEGVDFSGGE
DVRKKQALSNPNPNAVFSQEEEDDIAKAIQLSLVEGGGSSKSLSNNNNSG
AKGSTSLYPSTTDENLNIGSKEALVVKTSSSKLKARALYDFEAVDDNELT
FKAGEIVLILDNSDTNWWKGSNYRGEGLFPSNFVTTDLDDSVGEEKRRCS
MQ
back to top
Add to Basket