EMLSAP00000010910, EMLSAP00000010910 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000010910
Unique NameEMLSAP00000010910
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length889
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006600HTH CenpB-type DNA-binding domainSMARTSM00674CENPBcoord: 810..882
e-value: 1.6E-10
score: 51.0
coord: 702..763
e-value: 0.43
score: 12.1
coord: 575..636
e-value: 0.08
score: 19.4
IPR006600HTH CenpB-type DNA-binding domainPFAMPF03221HTH_Tnp_Tc5coord: 579..620
e-value: 5.2E-6
score: 26.0
coord: 815..878
e-value: 3.4E-11
score: 42.6
coord: 706..749
e-value: 5.1E-6
score: 26.1
IPR006600HTH CenpB-type DNA-binding domainPROSITEPS51253HTH_CENPBcoord: 804..882
score: 12.32
IPR000210BTB/POZ-likeSMARTSM00225BTBcoord: 30..125
e-value: 2.0E-16
score: 70.6
IPR000210BTB/POZ-likePROSITEPS50097BTBcoord: 30..95
score: 18.1
IPR011333BTB/POZ foldGENE3D3.30.710.10coord: 2..116
e-value: 4.3E-26
score: 90.7
IPR011333BTB/POZ foldSUPERFAMILY54695POZ domaincoord: 6..115
IPR013069BTB/POZPFAMPF00651BTBcoord: 20..118
e-value: 5.3E-18
score: 64.9
IPR009057Homeodomain-likeGENE3D1.10.10.60coord: 577..630
e-value: 6.8E-9
score: 35.2
coord: 704..744
e-value: 7.3E-7
score: 28.7
coord: 812..877
e-value: 6.6E-13
score: 48.1
IPR009057Homeodomain-likeGENE3D1.10.10.60coord: 759..800
e-value: 3.0E-9
score: 35.9
coord: 513..556
e-value: 1.8E-12
score: 46.2
coord: 640..683
e-value: 4.1E-11
score: 41.8
IPR009057Homeodomain-likeSUPERFAMILY46689Homeodomain-likecoord: 809..877
IPR009057Homeodomain-likeSUPERFAMILY46689Homeodomain-likecoord: 698..743
IPR009057Homeodomain-likeSUPERFAMILY46689Homeodomain-likecoord: 754..803
IPR009057Homeodomain-likeSUPERFAMILY46689Homeodomain-likecoord: 572..619
IPR009057Homeodomain-likeSUPERFAMILY46689Homeodomain-likecoord: 508..556
IPR009057Homeodomain-likeSUPERFAMILY46689Homeodomain-likecoord: 633..683
IPR007889DNA binding HTH domain, Psq-typePFAMPF04218CENP-B_Ncoord: 754..801
e-value: 1.8E-7
score: 30.3
coord: 508..556
e-value: 1.5E-9
score: 37.0
coord: 635..683
e-value: 1.5E-7
score: 30.5
IPR007889DNA binding HTH domain, Psq-typePROSITEPS50960HTH_PSQcoord: 630..681
score: 11.619
IPR007889DNA binding HTH domain, Psq-typePROSITEPS50960HTH_PSQcoord: 749..800
score: 13.392
IPR007889DNA binding HTH domain, Psq-typePROSITEPS50960HTH_PSQcoord: 503..554
score: 15.119
NoneNo IPR availablePANTHERPTHR23110:SF23BTB PROTEIN-RELATEDcoord: 5..147
NoneNo IPR availablePANTHERPTHR23110BTB DOMAIN TRANSCRIPTION FACTORcoord: 5..147

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000010910 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000010910EMLSAT00000010910-706757Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000010910 ID=EMLSAP00000010910|Name=EMLSAP00000010910|organism=Lepeophtheirus salmonis|type=polypeptide|length=889bp
MDDHFTLQWNDYQNHLMNAFTSLRNDKDFVXLTLSCEGRKISSHKMLLSA
CSPYFRGLLKDNPCPHPVIILRQTSYEDLVAIIHFVYNGEVSLHQSRVKS
FIKTAKSLKIRGLCEASEFGEEEEESVPSHEDQPQRKKVKLEDEEDEFGK
DWTFDYGGXAGDIPDESSTPNAVIAEVEREEFIDVNQSLSKRSRSYQRRF
LTKWMKIPEFAEWLMPYXKDPGRALCSICDKTVPAKIFDIRCHGNSKRHA
KMAQSLLTKPDVTVLGEDTAVVLDTDDHKTITIHHHDSVTVAEDEEEIRR
ALVATTSNTGXLEASEIEPDGGVSVDDHTSPIHIVPIEGEIQETSHDSKK
DEPGAIRVCKIVPQTKRYAQKFRDKWLNDPEFEPWLSRHESDPEKAVCTV
CRKTLNAKLYDLKHHSRSMRHRRNSIMEQGSGGLTEDTPDEERIYQTEEI
IIKTTTSNDNVGINDDIQGSIGGGDSETINSKDVTLTHETSTVEITTALR
SGSGTVHKRRAISIETKMDIIKRKEQGERTCQIAQDYGIAKSTISTILKN
GESIKKLSAIPSMMGAFYDTRRSRSGKMHEMERILNMWIEDQNSSNQIVN
GPIIQEKAREIWVDIGGPDDDESKTFVASRPTSQKRRAISLETKLDILKR
KDRGDRSTDIANAYGFGTSTVCTILKNRDQILKLSSIPCMMGSFYDTTRT
RGGKMHEMERILNTWILEQNEMNSVLNGPVIQEKAREIWVDIGGLDEEDG
TKYRRRVISLETKLDILKRKEDGERICELAREYGLAKTTISSIIRNSEAI
KLSSFGPNKAKKMREMELILSSWIKEQNEAKEILSGPAIQDMAREIWADI
EGPDNEDGSKAFVASDGWFKRFRQRFNLLPESVKXEEKL
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