EMLSAP00000011010, EMLSAP00000011010 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000011010
Unique NameEMLSAP00000011010
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length860
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028TPRcoord: 726..759
e-value: 23.0
score: 11.8
coord: 621..654
e-value: 3.6E-6
score: 36.5
coord: 692..725
e-value: 0.021
score: 24.0
coord: 470..503
e-value: 1.2E-4
score: 31.4
coord: 504..537
e-value: 0.17
score: 21.0
coord: 760..794
e-value: 4.3
score: 16.3
coord: 587..620
e-value: 0.16
score: 21.0
IPR019734Tetratricopeptide repeatPFAMPF13174TPR_6coord: 728..759
e-value: 0.53
score: 10.7
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 692..725
score: 8.555
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 761..794
score: 5.34
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 621..654
score: 12.951
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 726..759
score: 5.989
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 470..503
score: 9.942
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 504..537
score: 8.88
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 587..620
score: 8.408
IPR013105Tetratricopeptide TPR2PFAMPF07719TPR_2coord: 762..794
e-value: 0.0036
score: 16.9
IPR011990Tetratricopeptide-like helicalGENE3D1.25.40.10coord: 677..804
e-value: 3.4E-23
score: 81.2
coord: 443..669
e-value: 1.3E-42
score: 145.0
NoneNo IPR availablePFAMPF13424TPR_12coord: 469..534
e-value: 5.3E-9
score: 35.7
NoneNo IPR availablePFAMPF13231PMT_2coord: 116..271
e-value: 1.3E-5
score: 25.0
NoneNo IPR availablePFAMPF13414TPR_11coord: 605..652
e-value: 3.1E-9
score: 36.2
NoneNo IPR availablePANTHERPTHR23083:SF1SMILE PROTEINcoord: 5..804
NoneNo IPR availablePANTHERPTHR23083TETRATRICOPEPTIDE REPEAT PROTEIN, TPRcoord: 5..804
NoneNo IPR availableSUPERFAMILY48452TPR-likecoord: 681..805
NoneNo IPR availableSUPERFAMILY48452TPR-likecoord: 444..709
NoneNo IPR availableTMHMMTMhelixcoord: 232..249
NoneNo IPR availableTMHMMTMhelixcoord: 377..399
NoneNo IPR availableTMHMMTMhelixcoord: 256..278
NoneNo IPR availableTMHMMTMhelixcoord: 210..227
NoneNo IPR availableTMHMMTMhelixcoord: 175..197
NoneNo IPR availableTMHMMTMhelixcoord: 47..69
NoneNo IPR availableTMHMMTMhelixcoord: 133..155
NoneNo IPR availableTMHMMTMhelixcoord: 342..364
IPR001440Tetratricopeptide TPR1PFAMPF00515TPR_1coord: 693..721
e-value: 0.0011
score: 18.3
IPR013618Domain of unknown function DUF1736PFAMPF08409DUF1736coord: 278..352
e-value: 7.4E-25
score: 86.2
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 436..794
score: 57.363

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000011010 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000011010EMLSAT00000011010-706857Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000011010 ID=EMLSAP00000011010|Name=EMLSAP00000011010|organism=Lepeophtheirus salmonis|type=polypeptide|length=860bp
MKPPGSSTNTERLFSSPLTLVTVYIPWLSDCRLEREPWGWADTMKWPYFL
LWALTALCYWNGLFCDLVFDDVSAVRDNKDLRPSTPITNIFFNDFWGTPM
SKEHSHKSYRPITVLTFRLNYLIHGVAPLGYHFVNVLLHGIVCCLYYKLC
HVFVNRKTSFISSILFSVHPVHTEAVTGVVGRAELLSSIFFILSLLLFTN
SSNSRQSKTSVLFSSTLFLVFVSLAVFSKEQGITVLGVAFLLEVYDFITS
KKKKAYFWSRICLLISAGAVLLFLRFKVMGSSLPVFTTFDNPASYEGSTI
RRLTWSYLLALNSWILLCPDWLCCDWTMGSVPLVPGFSDIRNLSTCLFFI
VGGAMALLILRGLLKSSREQRSLFAALCLIGLPFLPASNLFFPVGFVVAE
RVLYIPSMGFCLLIGLGYQSLLSDKNKIILKVLLISTVIVHIIKCNIRNK
DWRNEYDIFKSGLKVMPTNAKLWNNVGHALEAQEDYHEALKYFKIASEVQ
TDDIGAYINVGRTFNNLKNYKLAEEYYLKAKALLPQAKKGQRYMAXIAPQ
HLSVFLNLGNLISKDPNRLEEADRLYRQAISMRSDYVQAYINRGDILIKM
NRTFEAQEVYEKALLYENSNPDLFYNLGVVFIERGLHQKALMYFDKALSV
DPNHIQSLMNSAVLMQELGIPSHRPIAIKRLHRVLEFTPNSERVYFNLAM
LAMDEENHQDAEKWFKKAINLKIDFRSALFNLALLLNEQKRSIEAVPFLK
FLLQYHPNHIKGLILLGDIYTNQLRILDEAEDCYKRILQIDPDHIQGRHN
LCVVXXKVVWTRRKNVFKKLYPELQMSNILLGICTLSKNEENSYHKAQQR
LNPMKVENIS
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