EMLSAP00000011127, EMLSAP00000011127 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000011127
Unique NameEMLSAP00000011127
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length1736
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 742..770
NoneNo IPR availablePANTHERPTHR11785:SF75AMINO ACIDS TRANSPORTER 2coord: 1446..1734
NoneNo IPR availableTMHMMTMhelixcoord: 1477..1499
NoneNo IPR availableTMHMMTMhelixcoord: 1663..1685
NoneNo IPR availableTMHMMTMhelixcoord: 1698..1720
NoneNo IPR availableTMHMMTMhelixcoord: 1551..1573
NoneNo IPR availableTMHMMTMhelixcoord: 1506..1528
NoneNo IPR availableTMHMMTMhelixcoord: 1621..1643
IPR001680WD40 repeatSMARTSM00320WD40coord: 533..572
e-value: 4.5E-4
score: 29.5
coord: 54..91
e-value: 0.0064
score: 25.7
coord: 1317..1357
e-value: 7.6E-4
score: 28.8
coord: 437..482
e-value: 4.4E-4
score: 29.6
coord: 4..48
e-value: 0.35
score: 19.9
coord: 298..346
e-value: 100.0
score: 4.3
coord: 485..530
e-value: 130.0
score: 3.6
IPR001680WD40 repeatPFAMPF00400WD40coord: 543..571
e-value: 2.7E-4
score: 20.5
coord: 20..48
e-value: 0.013
score: 15.2
coord: 1321..1356
e-value: 0.0011
score: 18.7
coord: 58..91
e-value: 0.029
score: 14.1
coord: 441..482
e-value: 1.6E-4
score: 21.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 23..50
score: 9.071
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 444..491
score: 10.107
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 61..100
score: 9.807
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 540..581
score: 10.909
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1324..1361
score: 9.272
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 20..337
e-value: 5.1E-24
score: 84.0
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 1296..1357
e-value: 5.4E-41
score: 139.8
coord: 338..595
e-value: 5.4E-41
score: 139.8
IPR002293Amino acid/polyamine transporter IPFAMPF13520AA_permease_2coord: 1471..1732
e-value: 1.2E-45
score: 155.7
IPR002293Amino acid/polyamine transporter IPANTHERPTHR11785AMINO ACID TRANSPORTERcoord: 1446..1734
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 35..49
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 469..483
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 333..347
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1324..1366
score: 8.571
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 16..100
score: 14.055
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 444..581
score: 18.299
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 21..349
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 331..348
coord: 376..587
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 1298..1390

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000011127 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000011127EMLSAT00000011127-706974Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000011127 ID=EMLSAP00000011127|Name=EMLSAP00000011127|organism=Lepeophtheirus salmonis|type=polypeptide|length=1736bp
MTSTSSLVVPLIMWGRSPPSHCISSITVLHENKTLATGGQDGEIILWDMD
HNWNLTPRHLLVGHSSGIRCLTKTGQYLVSASENGELNLWDPVDGSCIES
KKYPHLVHSWVQSYRSPANNRVKLFSCGLYEEIVAFDSTSLEVLFQLSSR
VNPDWISSFHVLRPPNRKDDVVLALTTSGTVKVWTLTGNEESSEQSVLEN
ESKQIRCVNSVRLSCCAYNMRTVLIVCSKYWNIYDAGDFTCLLTMHCRKG
ERWSGGEFVSGDRVCIWSDDGKAYIYKLPTNCIVESKDFHNKSKESSKSV
LLHKLEAKEKALHCPPAFDFFKIVRKDKSLKFLLSGDCDGCVSIWNISDI
SGSDENTKGLLPIKTTSLEEKWKGLSECPLGILGQLGNDAPEITSTIFLP
MQCRLVCGRDDGSIVMVPATQTIMLHLLSGRHQKYSNWPHQQMLIGHSGR
VNCLLYPNNDHPRYDVSYLVSGSVDFSVCLWDIYTGTLLHTFSSHGGEVM
SLYVPPPXCSPRIQXCXCSXASDNSVTLLSLKERRCVMLASRHLYPVTTI
KWRPFDDFLIVGCSDGTTYVWQMETGHLDRVVHGHSGDEILAACDENAPT
INIGESVGANPALHFFRGLRHRNLAAMKIATQTGMSQIQQGQRGNAHAAI
QEKNRSYPLIVNGFRTNPKNFESHILFFDVEALIVQLLSEEYQTMTPGTM
ETQGFTNQKDYDRIWALTKPASPDTVKKISGFLNKRKLTGFMSKVKEGAE
KAKGELEHAKREIEKRAGALDESGLXIKNEEDSENGVIRPSSLHLEINLT
LEIGQLLLSLLHAWGLDKDLDKVATSKLGLLRPKVPVSFGILSKGGGVMS
LSLPTYHLGDTSVKDNAYNTQFFTSMGHWELSHTLTTNHLLSVISITNTL
ISVSNASFIPEQERKRKLVRQATHGAMELPAGEDSSVFSHQQEQIQQGWX
LLSTLHCFLIPEKLKTSISFKKPLVELLAIRWQDRCLQVRLAAQELLVAE
LKNMGLEGRKKLVEVWGLYLPKYGDPPFQPSTTPTTNGQENNVLEEDDED
FYEDEKDDAAVEARRNQTTSVILLGVIGALFDIDGSKNSEHALGSNMIRL
TAKALMYLVLCPKGDGNFGSNKAGGSTSALRRAAIDLIARGFCLWEPHLE
VSKVLLSLLEMCSEADWWVPSTKYGLPLTPSGDSCRTSRHALMQIAKARP
GAFVTSIAREISRFNNLAANSQSLNVNLNQHVLTRSKAEILHLIEVLIET
NKQDLIDLLVNVTDIALHCIDGNHLKNKCMGDIFPPISYFPQISHCMQTR
RLAVGTKTGSLVMYXLXASKLQSIPAHSGSIIAVSFSPDGKNLATFSDSD
NKLHFWQTSTGMFGLGNAQTRCTKSYNVNPSSKSSQWTPNHMPKLFICYL
YLNTFTNEVPSGILSLKKEINSLKNSLLRQGCIKMTIRNETVRVPGEDNH
FLAQEEPQNEEQEGTHLKRELGLLDGASIIIGIIVGSGIFVSPKGVLLYA
GSTGLALVVWLISGLICMIGALCYTELGTMIPKSGGDYAYINESFGSYPA
FLYLWSSLLVIMPAGSAVTALTFASYILQPFWPVCDPPEEAIKLIATAII
CLLTAINCHDXKSAXRVQDIFXATKVIALIVIIIAGFVWLGLGHVDNLRP
SKVFVNSQFSPGYLALSFYSGLFSYAGWNYLNFVTEELKEPNKNLPRAIY
VSIPLVTIIYLLTNIAYFAVLLPDEILASNAVAVXS
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