EMLSAP00000011350, EMLSAP00000011350 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000011350
Unique NameEMLSAP00000011350
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length960
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000742Epidermal growth factor-like domainSMARTSM00181EGFcoord: 383..421
e-value: 0.26
score: 20.4
coord: 199..237
e-value: 20.0
score: 12.7
coord: 240..280
e-value: 21.0
score: 12.2
coord: 339..378
e-value: 0.24
score: 20.5
coord: 284..320
e-value: 0.49
score: 19.4
coord: 158..196
e-value: 0.0013
score: 28.0
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 281..319
score: 7.102
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 336..378
score: 6.636
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 155..196
score: 9.542
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 380..421
score: 8.029
IPR001881EGF-like calcium-binding domainSMARTSM00179EGF_CAcoord: 281..320
e-value: 3.2E-4
score: 30.0
coord: 336..378
e-value: 2.1E-5
score: 33.9
coord: 158..196
e-value: 0.026
score: 14.6
IPR001881EGF-like calcium-binding domainPFAMPF07645EGF_CAcoord: 281..314
e-value: 5.5E-6
score: 26.1
coord: 336..372
e-value: 3.5E-7
score: 29.9
NoneNo IPR availableGENE3D2.10.25.10coord: 336..370
e-value: 8.8E-8
score: 31.6
NoneNo IPR availableGENE3D4.10.1080.10coord: 422..546
e-value: 2.1E-23
score: 82.0
coord: 553..685
e-value: 5.5E-32
score: 109.8
NoneNo IPR availableGENE3D2.10.25.10coord: 158..233
e-value: 5.9E-4
score: 19.5
coord: 240..317
e-value: 2.3E-8
score: 33.6
NoneNo IPR availablePANTHERPTHR10199:SF72SUBFAMILY NOT NAMEDcoord: 247..935
NoneNo IPR availablePANTHERPTHR10199THROMBOSPONDINcoord: 247..935
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..28
score: 0.529
NoneNo IPR availableSUPERFAMILY103647TSP type-3 repeatcoord: 430..498
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 330..370
NoneNo IPR availableSUPERFAMILY103647TSP type-3 repeatcoord: 563..683
NoneNo IPR availableSUPERFAMILY103647TSP type-3 repeatcoord: 499..565
IPR013320Concanavalin A-like lectin/glucanase, subgroupGENE3D2.60.120.200coord: 689..900
e-value: 2.9E-107
score: 356.4
IPR003367Thrombospondin, type 3-like repeatPFAMPF02412TSP_3coord: 517..552
e-value: 9.6E-10
score: 37.6
coord: 455..490
e-value: 7.5E-14
score: 50.8
coord: 615..649
e-value: 5.1E-10
score: 38.5
coord: 650..683
e-value: 6.7E-13
score: 47.7
coord: 554..575
e-value: 0.022
score: 14.1
coord: 576..613
e-value: 9.8E-9
score: 34.4
IPR008859Thrombospondin, C-terminalPFAMPF05735TSP_Ccoord: 703..903
e-value: 7.1E-108
score: 358.6
IPR008859Thrombospondin, C-terminalPROSITEPS51236TSP_CTERcoord: 689..903
score: 104.858
IPR018097EGF-like calcium-binding, conserved sitePROSITEPS01187EGF_CAcoord: 336..362
IPR018097EGF-like calcium-binding, conserved sitePROSITEPS01187EGF_CAcoord: 281..306
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 407..420
IPR017897Thrombospondin, type 3 repeatPROSITEPS51234TSP3coord: 650..685
score: 14.548
IPR017897Thrombospondin, type 3 repeatPROSITEPS51234TSP3coord: 517..552
score: 17.571
IPR017897Thrombospondin, type 3 repeatPROSITEPS51234TSP3coord: 553..575
score: 11.782
IPR017897Thrombospondin, type 3 repeatPROSITEPS51234TSP3coord: 455..490
score: 19.067
IPR017897Thrombospondin, type 3 repeatPROSITEPS51234TSP3coord: 422..454
score: 9.495
IPR017897Thrombospondin, type 3 repeatPROSITEPS51234TSP3coord: 614..649
score: 16.446
IPR017897Thrombospondin, type 3 repeatPROSITEPS51234TSP3coord: 494..516
score: 10.31
IPR017897Thrombospondin, type 3 repeatPROSITEPS51234TSP3coord: 576..613
score: 15.649
IPR008985Concanavalin A-like lectin/glucanases superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 686..900

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000011350 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000011350EMLSAT00000011350-707197Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000011350 ID=EMLSAP00000011350|Name=EMLSAP00000011350|organism=Lepeophtheirus salmonis|type=polypeptide|length=960bp
MPVYLFIKMNSRCLLLNILFYCLNISQSRSSLIDDRSANRNFRKVLNRQT
FILALEGVWDRAHYSIKPNPLLSIEFGDVHKEFQIYLLEDSFTIEFVLRR
YTDTIWRKKVSIPELAYIKDDNRVENDQLLIIFEQNVETSSLRESILNCK
ACQVKKPECSDIPSPCFHGVKCRNTPDGPVCGECPIGFEGNGHFCERKIC
KTNPCYSGVTCYPKDNAPYFRCGPCPIGYRGNGITCYPSQCEKNPPPCYN
GVDCFNLDNLPYYKCGACPQGLTGNGTWCSDLDECDLADPCDVSVTCYNT
VPGFRCGPCPVGFSGSEGFIGVGLDFASRQRQVCYDVNECAKNNGYCVEN
SLCVNTEGSYYCGPCIRGFVGNQIEGCSNRPGVCPDGTVCDENADCIMPP
TASFYICKCKVGWAGDGKVCGPDRDLDAWPDIDISCSELKCRRDNCLDTP
NSGQEDSDQDGIGDACDEDADNDGIPNTPDNCPLVSNPDQADTEVDGDDK
RGDACDNCPYLPNINQEDTDEDGVGDSCDDDIDNDRVPNENDNCPMIVNS
DQIDSDDDGIGDACDNCPHIKNTDQQDSDEDTFGDICDNNNDADKDGIHD
DIDNCPMEPNSDQLDTDSDGIGDDCDRDADNDGIENEKDNCWIAANPDQK
DSDLDGRGDICDKDTDTDGTPDLFDNCPNNSKIYSTDFRTYQTVVLDPHG
DSQIDPNWVIYNKGAEIVQTMNSDPGLAVGFHRFGGVDFEGTFFVDTEID
DDYVGFIFSYQDNNQFYTVMWKKNTQTYWQXTPFRAVAEPGIQLKLVQSK
TGPGQMMRNAMWHTGNTENQVKLLWKDPRNVGWREKVAYRWLLLHRPKIG
LIRLRIFEGEKMVADSGNIFDDTLKGGRLGVFCFSQEMIIWSDLVYRCND
HVPEVIYNELPERIKTREGTTSRDYMQLLSLAKYFRGGVQSRIYSLFFIF
VMTSPLMEIL
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