transcription factor hnf-4 homolog, maker-scaffold1013_size70870-snap-gene-0.16 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of transcription factor hnf-4 homolog vs. L. salmonis genes
Match: EMLSAG00000011907 (supercontig:LSalAtl2s:LSalAtl2s83:639505:641027:-1 gene:EMLSAG00000011907 transcript:EMLSAT00000011907 description:"maker-LSalAtl2s83-augustus-gene-6.22") HSP 1 Score: 72.0182 bits (175), Expect = 1.476e-13 Identity = 37/91 (40.66%), Postives = 48/91 (52.75%), Query Frame = 0 Query: 195 VLPMNCAICGDKATGKH--YGAASCDGCKGFFRRSVRK---KQAYICRFYRNCVVTKDKRNQCRFCRLRKCMKAGMKTDSVQHTRDRISSK 280 LP C ICG+ A GKH YG C C+ FFRRSV+ KQ C +C++ R C+ CR +KC+ AGM+ V +R S K Sbjct: 101 ALPRLCQICGEVA-GKHVYYGGQCCTSCRAFFRRSVQNNSYKQFSCCSKTEDCIINLQTRKSCQLCRFQKCISAGMRASWVLPDGERRSKK 190
BLAST of transcription factor hnf-4 homolog vs. L. salmonis genes
Match: EMLSAG00000005620 (supercontig:LSalAtl2s:LSalAtl2s301:514440:538934:1 gene:EMLSAG00000005620 transcript:EMLSAT00000005620 description:"maker-LSalAtl2s301-augustus-gene-5.4") HSP 1 Score: 65.4698 bits (158), Expect = 1.653e-12 Identity = 30/78 (38.46%), Postives = 44/78 (56.41%), Query Frame = 0 Query: 200 CAICGDKATGKHYGAASCDGCKGFFRRSVRKKQ---AYICRFYRNCVVTKDKRNQCRFCRLRKCMKAGMKTDSVQHTR 274 C +C + A G H+GA +C+GCK FF R+ K C+ +CV+ K R C+ CRLRKC++ GM ++ R Sbjct: 38 CRVCDEPAAGYHFGAFTCEGCKSFFGRTCGKSNLNSISECKNNYSCVIDKKNRTSCKACRLRKCLRVGMSKAGSRYGR 115
BLAST of transcription factor hnf-4 homolog vs. L. salmonis genes
Match: EMLSAG00000004174 (supercontig:LSalAtl2s:LSalAtl2s220:369739:371271:-1 gene:EMLSAG00000004174 transcript:EMLSAT00000004174 description:"augustus_masked-LSalAtl2s220-processed-gene-3.5") HSP 1 Score: 67.781 bits (164), Expect = 3.469e-12 Identity = 34/86 (39.53%), Postives = 43/86 (50.00%), Query Frame = 0 Query: 200 CAICGDKAT-GKHYGAASCDGCKGFFRRSVRKKQAYICRFYR-------NCVVTKDKRNQCRFCRLRKCMKAGMKTDSVQHTRDRI 277 C ICGD A HYGA +C C+ FF R+V K R R C++TK R C+FCR R C+ AGM V +R+ Sbjct: 137 CRICGDIAPPHNHYGAIACFSCRAFFGRTVHKGTQERFRCVRGNPDESGQCMITKATRTHCQFCRYRGCLSAGMXPSYVTTAEERL 222
BLAST of transcription factor hnf-4 homolog vs. L. salmonis genes
Match: EMLSAG00000003771 (supercontig:LSalAtl2s:LSalAtl2s2039:3647:12796:1 gene:EMLSAG00000003771 transcript:EMLSAT00000003771 description:"maker-LSalAtl2s2039-snap-gene-0.4") HSP 1 Score: 55.4546 bits (132), Expect = 2.571e-8 Identity = 23/55 (41.82%), Postives = 38/55 (69.09%), Query Frame = 0 Query: 221 KGFFRRSVRKKQAY-ICRFYRNCVVTKDKRNQCRFCRLRKCMKAGMKTDSVQHTR 274 +GFFRRS+++K Y C + C + + RN+C++CRL+KC+ +GM D+V+ R Sbjct: 17 QGFFRRSIQQKIQYRPCTKNQQCNIQRINRNRCQYCRLKKCIASGMSRDAVRFGR 71
BLAST of transcription factor hnf-4 homolog vs. L. salmonis genes
Match: EMLSAG00000007233 (supercontig:LSalAtl2s:LSalAtl2s405:178614:197434:1 gene:EMLSAG00000007233 transcript:EMLSAT00000007233 description:"maker-LSalAtl2s405-snap-gene-2.21") HSP 1 Score: 53.1434 bits (126), Expect = 1.041e-7 Identity = 24/48 (50.00%), Postives = 31/48 (64.58%), Query Frame = 0 Query: 242 CVVTKDKRNQCRFCRLRKCMKAGMKTDSVQHTRDRISSKRSTPESESS 289 CV+ K RNQC+ CRLRKC+ GM D+VQ+ R ++ PES SS Sbjct: 72 CVIDKAHRNQCQACRLRKCLHMGMNKDAVQNERQPRNTATLRPESFSS 119
BLAST of transcription factor hnf-4 homolog vs. SwissProt
Match: gi|148886627|sp|Q91766.2|HNF4A_XENLA (RecName: Full=Hepatocyte nuclear factor 4-alpha; Short=HNF-4-alpha; AltName: Full=Nuclear receptor subfamily 2 group A member 1) HSP 1 Score: 437.573 bits (1124), Expect = 7.033e-148 Identity = 219/364 (60.16%), Postives = 275/364 (75.55%), Query Frame = 0 Query: 176 STEVVTSLEATHSPEANGNVLPMNCAICGDKATGKHYGAASCDGCKGFFRRSVRKKQAYICRFYRNCVVTKDKRNQCRFCRLRKCMKAGMKTDSVQHTRDRISSKRSTPESESSNPSISGLSVTTLEKAELLSRHGQHGYDIQKDQLTNREIETKQLASIADIGDSMKQQLLILVEWAKHIPAFCDLSIDDQVALLRAHAGEHLLLGVTRRSLHLNDILLLGNDMIIPKDPQDWGNPWLNDTQDVVVRNIGLRVMNELVTPFRQLLMDDTEFACLKAIVFFDPYARGLTDVGKIERLRYQVQVNLEDYIADRQYDTRGRFGKILLTLPSLQSITWHMIEQISVAKNYGIAHIDNLLQEMLLGGA 539 ST VTSL A++S N CAICGD+ATGKHYGA+SCDGCKGFFRRSVRK Y CRF R CVV KDKRNQCR+CRL+KC +AGMK ++VQ+ RDRIS++RS+ E +SS PSI+ L +AE+LS+ + N +I K++A I D+ DSMKQQLL+LVEWAK+IPAFC+L +DDQVALLRAHAGEHLLLG T+RS+ DILLLGND +IP++ ++ V + +R+++ELV PF++L +DD E+ACLKAI+FFDP A+GL+D KI+R+RYQVQV+LEDYI DRQYD+RGRFG++LL LP+LQSITW MIEQI K +G+A IDNLLQEMLLGG+ Sbjct: 41 STSDVTSLSASNSIGINSL-----CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNERDRISTRRSSYE-DSSLPSIN-----VLIQAEVLSQQITSSVGV-----LNTDIRGKKIACIIDVCDSMKQQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMMFKDILLLGNDRLIPRN-----------CPELEVGRVAVRILDELVLPFQELQIDDNEYACLKAIIFFDPDAKGLSDPTKIKRMRYQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFVKLFGMAKIDNLLQEMLLGGS 377
BLAST of transcription factor hnf-4 homolog vs. SwissProt
Match: gi|148886625|sp|P49698.2|HNF4A_MOUSE (RecName: Full=Hepatocyte nuclear factor 4-alpha; Short=HNF-4-alpha; AltName: Full=Nuclear receptor subfamily 2 group A member 1; AltName: Full=Transcription factor 14; Short=TCF-14; AltName: Full=Transcription factor HNF-4) HSP 1 Score: 428.713 bits (1101), Expect = 3.411e-144 Identity = 224/399 (56.14%), Postives = 288/399 (72.18%), Query Frame = 0 Query: 156 IAGEDIMDSSSS-NPMDNHLASTEV-VTSLEATHSPEANGNVLPMN-------CAICGDKATGKHYGAASCDGCKGFFRRSVRKKQAYICRFYRNCVVTKDKRNQCRFCRLRKCMKAGMKTDSVQHTRDRISSKRSTPESESSNPSISGLSVTTLEKAELLSRHGQHGYDIQKDQLT------NREIETKQLASIADIGDSMKQQLLILVEWAKHIPAFCDLSIDDQVALLRAHAGEHLLLGVTRRSLHLNDILLLGNDMIIPKDPQDWGNPWLNDTQDVVVRNIGLRVMNELVTPFRQLLMDDTEFACLKAIVFFDPYARGLTDVGKIERLRYQVQVNLEDYIADRQYDTRGRFGKILLTLPSLQSITWHMIEQISVAKNYGIAHIDNLLQEMLLGGA 539 +AG D+ D S++ +P L V V ++ SP N+ N CAICGD+ATGKHYGA+SCDGCKGFFRRSVRK Y CRF R CVV KDKRNQCR+CRL+KC +AGMK ++VQ+ RDRIS++RS+ E +SS PSI+ L +AE+LS+ Q+T N +I K++A+I D+ +SMK+QLL+LVEWAK+IPAFC+L +DDQVALLRAHAGEHLLLG T+RS+ D+LLLGND I+P+ P L + + + +R+++ELV PF++L +DD E+ACLKAI+FFDP A+GL+D GKI+RLR QVQV+LEDYI DRQYD+RGRFG++LL LP+LQSITW MIEQI K +G+A IDNLLQEMLLGG+ Sbjct: 7 LAGMDMADYSAALDPAYTTLEFENVQVLTMGNDTSPSEGANLNSSNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNERDRISTRRSSYE-DSSLPSINALL-----QAEVLSQ-----------QITSPISGINGDIRAKKIANITDVCESMKEQLLVLVEWAKYIPAFCELLLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIVPRH-----CPELAE-----MSRVSIRILDELVLPFQELQIDDNEYACLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEMLLGGS 378
BLAST of transcription factor hnf-4 homolog vs. SwissProt
Match: gi|148886624|sp|P41235.3|HNF4A_HUMAN (RecName: Full=Hepatocyte nuclear factor 4-alpha; Short=HNF-4-alpha; AltName: Full=Nuclear receptor subfamily 2 group A member 1; AltName: Full=Transcription factor 14; Short=TCF-14; AltName: Full=Transcription factor HNF-4) HSP 1 Score: 427.172 bits (1097), Expect = 1.161e-143 Identity = 213/346 (61.56%), Postives = 267/346 (77.17%), Query Frame = 0 Query: 200 CAICGDKATGKHYGAASCDGCKGFFRRSVRKKQAYICRFYRNCVVTKDKRNQCRFCRLRKCMKAGMKTDSVQHTRDRISSKRSTPESESSNPSISGLSVTTLEKAELLSRHGQHGYDIQKDQLT------NREIETKQLASIADIGDSMKQQLLILVEWAKHIPAFCDLSIDDQVALLRAHAGEHLLLGVTRRSLHLNDILLLGNDMIIPKDPQDWGNPWLNDTQDVVVRNIGLRVMNELVTPFRQLLMDDTEFACLKAIVFFDPYARGLTDVGKIERLRYQVQVNLEDYIADRQYDTRGRFGKILLTLPSLQSITWHMIEQISVAKNYGIAHIDNLLQEMLLGGA 539 CAICGD+ATGKHYGA+SCDGCKGFFRRSVRK Y CRF R CVV KDKRNQCR+CRL+KC +AGMK ++VQ+ RDRIS++RS+ E +SS PSI+ L +AE+LSR Q+T N +I K++ASIAD+ +SMK+QLL+LVEWAK+IPAFC+L +DDQVALLRAHAGEHLLLG T+RS+ D+LLLGND I+P+ P L + + + +R+++ELV PF++L +DD E+A LKAI+FFDP A+GL+D GKI+RLR QVQV+LEDYI DRQYD+RGRFG++LL LP+LQSITW MIEQI K +G+A IDNLLQEMLLGG+ Sbjct: 60 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNERDRISTRRSSYE-DSSLPSINALL-----QAEVLSR-----------QITSPVSGINGDIRAKKIASIADVCESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIVPRH-----CPELAE-----MSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEMLLGGS 378
BLAST of transcription factor hnf-4 homolog vs. SwissProt
Match: gi|635377442|sp|P49866.3|HNF4_DROME (RecName: Full=Transcription factor HNF-4 homolog; Short=dHNF4; AltName: Full=Nuclear receptor subfamily 2 group A member 4) HSP 1 Score: 435.261 bits (1118), Expect = 1.177e-143 Identity = 220/391 (56.27%), Postives = 282/391 (72.12%), Query Frame = 0 Query: 197 PMNCAICGDKATGKHYGAASCDGCKGFFRRSVRKKQAYICRFYRNCVVTKDKRNQCRFCRLRKCMKAGMKTDSVQHTRDRISSKRSTPESESSNPSISGLSVTTLEKAELLSRHGQHGYDIQKDQLTNREIETKQLASIADIGDSMKQQLLILVEWAKHIPAFCDLSIDDQVALLRAHAGEHLLLGVTRRSLHLNDILLLGNDMIIPKDPQDWGNPWLNDTQDVVVRNIGLRVMNELVTPFRQLLMDDTEFACLKAIVFFDPYARGLTDVGKIERLRYQVQVNLEDYIADRQYDTRGRFGKILLTLPSLQSITWHMIEQISVAKNYGIAHIDNLLQEMLLGGAIYPQNGNGSTPSSPSATSMALSNSMSLTSSLMNLDTSSTYNPPLQSVA 587 P CAICGD+ATGKHYGA+SCDGCKGFFRRSVRK Y CRF RNCVV KDKRNQCR+CRLRKC KAGMK ++VQ+ RDRIS +R++ ++ +P +GLSV +L KAE SR + G ++ + N ++ KQ ASI D+ +SMKQQLL LVEWAK IPAF +L +DDQVALLRAHAGEHLLLG++RRS+HL D+LLL N+ +I + D P ++ D+ IG R+++ELVT + + +DDTEFAC+KA+VFFDP A+GL + +I+ LR+Q+ NLEDYI+DRQY++RGRFG+ILL LP LQSITW MIEQI AK +G+AHID+LLQEMLLGG + + P SP SN + N++ + N L S+A Sbjct: 139 PTVCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHQYTCRFARNCVVDKDKRNQCRYCRLRKCFKAGMKKEAVQNERDRISCRRTS--NDDPDPG-NGLSVISLVKAENESRQSKAGAAMEPN--INEDLSNKQFASINDVCESMKQQLLTLVEWAKQIPAFNELQLDDQVALLRAHAGEHLLLGLSRRSMHLKDVLLLSNNCVITRHCPD---PLVSPNLDI--SRIGARIIDELVTVMKDVGIDDTEFACIKALVFFDPNAKGLNEPHRIKSLRHQILNNLEDYISDRQYESRGRFGEILLILPVLQSITWQMIEQIQFAKIFGVAHIDSLLQEMLLGGEL----ADNPLPLSPPNQ----SNDYQSPTHTGNMEGGNQVNSSLDSLA 511
BLAST of transcription factor hnf-4 homolog vs. SwissProt
Match: gi|148886626|sp|P22449.3|HNF4A_RAT (RecName: Full=Hepatocyte nuclear factor 4-alpha; Short=HNF-4-alpha; AltName: Full=Nuclear receptor subfamily 2 group A member 1; AltName: Full=Transcription factor 14; Short=TCF-14; AltName: Full=Transcription factor HNF-4) HSP 1 Score: 426.017 bits (1094), Expect = 3.146e-143 Identity = 209/346 (60.40%), Postives = 265/346 (76.59%), Query Frame = 0 Query: 200 CAICGDKATGKHYGAASCDGCKGFFRRSVRKKQAYICRFYRNCVVTKDKRNQCRFCRLRKCMKAGMKTDSVQHTRDRISSKRSTPESESSNPSISGLSVTTLEKAELLSRHGQHGYDIQKDQLT------NREIETKQLASIADIGDSMKQQLLILVEWAKHIPAFCDLSIDDQVALLRAHAGEHLLLGVTRRSLHLNDILLLGNDMIIPKDPQDWGNPWLNDTQDVVVRNIGLRVMNELVTPFRQLLMDDTEFACLKAIVFFDPYARGLTDVGKIERLRYQVQVNLEDYIADRQYDTRGRFGKILLTLPSLQSITWHMIEQISVAKNYGIAHIDNLLQEMLLGGA 539 CAICGD+ATGKHYGA+SCDGCKGFFRRSVRK Y CRF R CVV KDKRNQCR+CRL+KC +AGMK ++VQ+ RDRIS++RS+ E +SS PSI+ L +AE+LS+ Q+T N +I K++A+I D+ +SMK+QLL+LVEWAK+IPAFC+L +DDQVALLRAHAGEHLLLG T+RS+ D+LLLGND I+P+ + + + +R+++ELV PF++L +DD E+ACLKAI+FFDP A+GL+D GKI+RLR QVQV+LEDYI DRQYD+RGRFG++LL LP+LQSITW MIEQI K +G+A IDNLLQEMLLGG+ Sbjct: 60 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNERDRISTRRSSYE-DSSLPSINALL-----QAEVLSQ-----------QITSPISGINGDIRAKKIANITDVCESMKEQLLVLVEWAKYIPAFCELLLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIVPRHCPELAE----------MSRVSIRILDELVLPFQELQIDDNEYACLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEMLLGGS 378
BLAST of transcription factor hnf-4 homolog vs. SwissProt
Match: gi|160110004|sp|Q14541.3|HNF4G_HUMAN (RecName: Full=Hepatocyte nuclear factor 4-gamma; Short=HNF-4-gamma; AltName: Full=Nuclear receptor subfamily 2 group A member 2) HSP 1 Score: 417.542 bits (1072), Expect = 7.598e-141 Identity = 206/343 (60.06%), Postives = 261/343 (76.09%), Query Frame = 0 Query: 200 CAICGDKATGKHYGAASCDGCKGFFRRSVRKKQAYICRFYRNCVVTKDKRNQCRFCRLRKCMKAGMKTDSVQHTRDRISSKRSTPESESSNPSISGLSVTTLEKAELLSRH---GQHGYDIQKDQLTNREIETKQLASIADIGDSMKQQLLILVEWAKHIPAFCDLSIDDQVALLRAHAGEHLLLGVTRRSLHLNDILLLGNDMIIPKDPQDWGNPWLNDTQDVVVRNIGLRVMNELVTPFRQLLMDDTEFACLKAIVFFDPYARGLTDVGKIERLRYQVQVNLEDYIADRQYDTRGRFGKILLTLPSLQSITWHMIEQISVAKNYGIAHIDNLLQEMLLGGA 539 CAICGD+ATGKHYGA+SCDGCKGFFRRS+RK Y CRF R CVV KDKRNQCR+CRLRKC +AGMK ++VQ+ RDRIS++RST + S+ PSI+ TL +AE+ SR G ++ +I K++ASI D+ +SMKQQLL+LVEWAK+IPAFC+L +DDQVALLRAHAGEHLLLG T+RS+ DILLLGN+ +I ++ + +V + + RV++ELV PF+++ +DD E+ACLKAIVFFDP A+GL+D KI+ +R+QVQ+ LEDYI DRQYD+RGRFG++LL LP+LQSITW MIEQI K +G+ IDNLLQEMLLGGA Sbjct: 12 CAICGDRATGKHYGASSCDGCKGFFRRSIRKSHVYSCRFSRQCVVDKDKRNQCRYCRLRKCFRAGMKKEAVQNERDRISTRRSTFDG-SNIPSIN-----TLAQAEVRSRQISVSSPG--------SSTDINVKKIASIGDVCESMKQQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMMYKDILLLGNNYVIHRN-----------SCEVEISRVANRVLDELVRPFQEIQIDDNEYACLKAIVFFDPDAKGLSDPVKIKNMRFQVQIGLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFVKLFGMVKIDNLLQEMLLGGA 329
BLAST of transcription factor hnf-4 homolog vs. SwissProt
Match: gi|10720045|sp|Q9WUU6.2|HNF4G_MOUSE (RecName: Full=Hepatocyte nuclear factor 4-gamma; Short=HNF-4-gamma; AltName: Full=Nuclear receptor subfamily 2 group A member 2) HSP 1 Score: 416.772 bits (1070), Expect = 1.425e-140 Identity = 203/340 (59.71%), Postives = 256/340 (75.29%), Query Frame = 0 Query: 200 CAICGDKATGKHYGAASCDGCKGFFRRSVRKKQAYICRFYRNCVVTKDKRNQCRFCRLRKCMKAGMKTDSVQHTRDRISSKRSTPESESSNPSISGLSVTTLEKAELLSRHGQHGYDIQKDQLTNREIETKQLASIADIGDSMKQQLLILVEWAKHIPAFCDLSIDDQVALLRAHAGEHLLLGVTRRSLHLNDILLLGNDMIIPKDPQDWGNPWLNDTQDVVVRNIGLRVMNELVTPFRQLLMDDTEFACLKAIVFFDPYARGLTDVGKIERLRYQVQVNLEDYIADRQYDTRGRFGKILLTLPSLQSITWHMIEQISVAKNYGIAHIDNLLQEMLLGGA 539 CAICGD+ATGKHYGA+SCDGCKGFFRRS+RK Y CRF R CVV KDKRNQCR+CRLRKC +AGMK ++VQ+ RDRIS++RST E S+ PSI+ L+ + ++ DI K++ASI+D+ +SMKQQLL+LVEWAK+IPAFC+L +DDQVALLRAHAGEHLLLG T+RS+ DILLLGN +I ++ + +V V + RV++ELV PF+++ +DD E+ACLKAIVFFDP A+GL+D KI+ +R+QVQ++LEDYI DRQYD+RGRFG++LL LP+LQSITW MIEQI K +G+ IDNLLQEMLLGGA Sbjct: 12 CAICGDRATGKHYGASSCDGCKGFFRRSIRKSHVYSCRFSRQCVVDKDKRNQCRYCRLRKCFRAGMKKEAVQNERDRISTRRSTYEG-SNIPSINTLAQAEVRSCQISVPSPSSSTDI----------NIKKIASISDVCESMKQQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMMYKDILLLGNHYVIHRN-----------SCEVEVSRVANRVLDELVRPFQEIQIDDNEYACLKAIVFFDPDAKGLSDPVKIKNMRFQVQISLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFVKLFGMVKIDNLLQEMLLGGA 329
BLAST of transcription factor hnf-4 homolog vs. SwissProt
Match: gi|6016234|sp|P79926.1|HNF4B_XENLA (RecName: Full=Hepatocyte nuclear factor 4-beta; Short=HNF-4-beta; AltName: Full=Nuclear receptor subfamily 2 group A member 3) HSP 1 Score: 418.313 bits (1074), Expect = 1.553e-140 Identity = 204/364 (56.04%), Postives = 261/364 (71.70%), Query Frame = 0 Query: 175 ASTEVVTSLEATHSPEANGNVLPMNCAICGDKATGKHYGAASCDGCKGFFRRSVRKKQAYICRFYRNCVVTKDKRNQCRFCRLRKCMKAGMKTDSVQHTRDRISSKRSTPESESSNPSISGLSVTTLEKAELLSRHGQHGYDIQKDQLTNREIETKQLASIADIGDSMKQQLLILVEWAKHIPAFCDLSIDDQVALLRAHAGEHLLLGVTRRSLHLNDILLLGNDMIIPKDPQDWGNPWLNDTQDVVVRNIGLRVMNELVTPFRQLLMDDTEFACLKAIVFFDPYARGLTDVGKIERLRYQVQVNLEDYIADRQYDTRGRFGKILLTLPSLQSITWHMIEQISVAKNYGIAHIDNLLQEMLLGG 538 ++TE++T T SP N + CAICGD+ATGKHYGA+SCDGCKGFFRRSVRK Y CRF R C+V KDKRNQCR+CRLRKC +AGMK ++VQ+ RDRIS +RS+ E S LS+ L +AE + H Y + + +I K++ASI+D+ +SMKQQLL+LVEWAK+IPAFC+L +DDQVALLRAHAG HLLLGV +RSL D LLLGND I+P ++ + + R+++ELV P R++ +DD E+ CLKAI+FFDP +GL+D K++ +R+QVQVNLEDYI DRQ+D+RGRF ILL LP LQSITW MIEQ+ AK +G+A ID+LLQE+LLGG Sbjct: 27 SNTEIITV--ETASPGLLNNGINSFCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHVYACRFSRQCIVDKDKRNQCRYCRLRKCFRAGMKKEAVQNERDRISMRRSSYEDNGS------LSINVLTQAEAMV----HQYS-PVSPVHSSDISMKKVASISDVCESMKQQLLLLVEWAKYIPAFCELPLDDQVALLRAHAGAHLLLGVAKRSLPYKDFLLLGNDFIMPMH-----------CPELEIARVPCRILDELVKPLREIQIDDNEYVCLKAIIFFDPDCKGLSDQTKVKNMRFQVQVNLEDYINDRQFDSRGRFSDILLLLPPLQSITWQMIEQVQFAKLFGVARIDSLLQELLLGG 366
BLAST of transcription factor hnf-4 homolog vs. SwissProt
Match: gi|30315986|sp|P91829.2|NHR69_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-69) HSP 1 Score: 250.751 bits (639), Expect = 1.602e-76 Identity = 144/381 (37.80%), Postives = 217/381 (56.96%), Query Frame = 0 Query: 200 CAICGDKATGKHYGAASCDGCKGFFRRSVRKKQAYICRFYRNCVVTKDKRNQCRFCRLRKCMKAGMKTDSVQHTRDRISSKRSTPESESSNPSISGLSVTTLEKAELLSRHGQHG----------YDIQKDQLTNREIETKQLASIADIGDSMKQQLLILVEWAKHIPAFCDLSIDDQVALLRAHAGEHLLLGVTRRSLHL--NDILLLGNDMIIPKDPQDWGNPWLNDTQDVVVRNIGLRVMNELVTPFRQLLMDDTEFACLKAIVFFDPYARGLTDVGKIERLRYQVQVNLEDYIADRQYDT------RGRFGKILLTLPSLQSITWHMIEQISVAKNYGIAHIDNLLQEMLLGGAIYPQNGNGSTPSSPSATSMALSN 562 C IC DK+TGKHYGA SCDGCKGFFRRS+RK+ Y CRF +NC VTK+KRN CR CRL+KC+KAGMK++++Q+ RD I ++ T +E + + L AE L + + YD K E + A++ DIG S+ QQL++ +EWAK +P F L+ DQ ALL+ A ++LGV RS+ L + + L ND ++PK+ + TQ + + R+++E+V P R+L MD E+ LKAI+FF+P R + D +E RY +L+ D+ + R GK+LL LPSLQ+I ++E + +A+ +G+ ++D+L++E++L N PS P +L++ Sbjct: 6 CHICNDKSTGKHYGAISCDGCKGFFRRSIRKRYHYQCRFEQNCDVTKNKRNACRACRLQKCVKAGMKSNAIQNERDAIGKRKKTTGAEKEDL------IDQLVAAETLCQQLRSSVIKNTSSLAPYDCGK---VKWNYEDARAATLDDIGKSIHQQLVLFIEWAKSLPQFSFLAQADQAALLKGGAASIIVLGVAYRSICLTVENTICLANDTLLPKE---------HATQVGDINCVVGRIIDEIVNPMRRLNMDLIEYVALKAILFFNPVVREINDQSPVENARYAFLRSLQRRCTDKALENMEDESMDCRSGKLLLLLPSLQAIAQQLVEDVQLARLFGLVNVDSLMEELIL---------NDMKPSDPQILQTSLAS 359
BLAST of transcription factor hnf-4 homolog vs. SwissProt
Match: gi|74902124|sp|Q5I7G2.1|RXR_LYMST (RecName: Full=Retinoic acid receptor RXR; AltName: Full=Retinoid X receptor; Short=LymRXR) HSP 1 Score: 251.521 bits (641), Expect = 4.602e-76 Identity = 138/337 (40.95%), Postives = 194/337 (57.57%), Query Frame = 0 Query: 200 CAICGDKATGKHYGAASCDGCKGFFRRSVRKKQAYICRFYRNCVVTKDKRNQCRFCRLRKCMKAGMKTDSVQHTRDRISSKRSTPESESSNPSISGLSVTTLEKAELLSRHGQHGY-DIQKDQLTNREIETKQLASIADIGDSMKQQLLILVEWAKHIPAFCDLSIDDQVALLRAHAGEHLLLGVTRRSLHLNDILLLGNDMIIPKDPQDWGNPWLNDTQDVVVRNIGLRVMNELVTPFRQLLMDDTEFACLKAIVFFDPYARGLTDVGKIERLRYQVQVNLEDYIADRQYDTRGRFGKILLTLPSLQSITWHMIEQISVAKNYGIAHIDNLLQEML 535 CAICGD+A+GKHYG SC+GCKGFF+R+VRK Y CR +NC++ K +RN+C++CR KC+ GMK ++VQ R R+ K E ES++ + + + V + +AEL Y D QKD +TN I + +QL LVEWAK IP F +L ++DQV LLRA E L+ G + RS+ D +LL + + + + V I RV+ ELV R++ MD TE CL+A+V F+P A+GLT V ++E+LR +V +LE+Y R + GRF K+LL LP+L+SI +E + K G ID L EML Sbjct: 117 CAICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRDDKNCMIDKRQRNRCQYCRYMKCLSMGMKREAVQEERQRVKEKGDG-EVESTSGANNDMPVEQILEAELAVDPKIDTYIDAQKDPVTN-------------ICQAADKQLFTLVEWAKRIPHFTELPLEDQVILLRAGWNELLIAGFSHRSIMAKDGILLATGLHVHR----------SSAHQAGVGTIFDRVLTELVAKMREMKMDKTELGCLRAVVLFNPDAKGLTAVQEVEQLREKVYASLEEYTKTRYPEEPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDQPIDTFLMEML 429
BLAST of transcription factor hnf-4 homolog vs. nr
Match: gi|657600366|gb|AID52844.1| (hepatocyte nuclear factor 4 [Tigriopus japonicus]) HSP 1 Score: 654.44 bits (1687), Expect = 0.000e+0 Identity = 339/498 (68.07%), Postives = 395/498 (79.32%), Query Frame = 0 Query: 109 MTELTQLGVIPMVKLDSMG---PMSTQTMTTTSQGTTFSVLTNMNLMPTIIAGEDIMDSSSSNPMDNHLASTEV------VTSLEATHSPEANGNV---LPMNCAICGDKATGKHYGAASCDGCKGFFRRSVRKKQAYICRFYRNCVVTKDKRNQCRFCRLRKCMKAGMKTDSVQHTRDRISSKRSTPESESSNPSISGLSVTTLEKAELLSRHGQHGYD-IQKDQLTNREIETKQLASIADIGDSMKQQLLILVEWAKHIPAFCDLSIDDQVALLRAHAGEHLLLGVTRRSLHLNDILLLGNDMIIPKDPQDWGNPWLNDTQDVVVRNIGLRVMNELVTPFRQLLMDDTEFACLKAIVFFDPYARGLTDVGKIERLRYQVQVNLEDYIADRQYDTRGRFGKILLTLPSLQSITWHMIEQISVAKNYGIAHIDNLLQEMLLGGAIYPQN-GNGSTPSSPSATSMALSNSMSLTSSLMNLDTSSTYNPPLQSVANLIQS 592 M+EL L I +K++ G P S+ T+TTT+ G T+SVLTN+NLMPT+I+ + PMD+ AS+ + + E S +ANG+ LP CAICGDKATGKHYGAASCDGCKGFFRRSVRK+Q Y CRF+RNC VTK KRNQCR+CRL KCMKAGMKTD+VQH RDRISSK+ +PE+E SN +I+GLSV TL+ AELLSR GQ GYD I KDQL +I KQLASI++IGDSMKQQLLILVEWAKHIP F LSIDDQVALLRAHAGEHLLLGVTRRS+HL DILLLGNDMIIPKDPQDWGNPWLN+TQD VVR+IG+RVMNELV PF+++ +D+TEFACLKAIVFFDPYARGLTDV KIE+LRYQVQVNLEDYIADRQYDTRGRFGKILLTLPSLQSITWHMIEQIS+AK YGI HIDNLLQEMLL G+IYPQ+ GN S + ++ +S T + + + + +Y PLQ + N+IQ+ Sbjct: 2 MSELLHLSPISTLKMEHAGLVMPTSSGTLTTTTHGGTYSVLTNVNLMPTVISEAHPHEDYLIQPMDHQSASSHLDLGNSPPLTAEDEDSNDANGSGTPGLPKYCAICGDKATGKHYGAASCDGCKGFFRRSVRKQQQYTCRFHRNCHVTKMKRNQCRYCRLSKCMKAGMKTDAVQHERDRISSKKRSPEAEISNQTIAGLSVKTLQTAELLSRQGQQGYDVIPKDQLAELDISNKQLASISNIGDSMKQQLLILVEWAKHIPVFSKLSIDDQVALLRAHAGEHLLLGVTRRSMHLKDILLLGNDMIIPKDPQDWGNPWLNETQDTVVRHIGIRVMNELVGPFKEIQIDETEFACLKAIVFFDPYARGLTDVEKIEKLRYQVQVNLEDYIADRQYDTRGRFGKILLTLPSLQSITWHMIEQISMAKTYGITHIDNLLQEMLLSGSIYPQDSGNTSNNNGSQSSPSTCPSSSQSTLNTIAMTSLESYG-PLQPITNIIQN 498
BLAST of transcription factor hnf-4 homolog vs. nr
Match: gi|1000723343|ref|XP_015610180.1| (PREDICTED: hepatocyte nuclear factor 4-gamma isoform X5 [Cephus cinctus] >gi|1000723346|ref|XP_015610181.1| PREDICTED: hepatocyte nuclear factor 4-gamma isoform X5 [Cephus cinctus]) HSP 1 Score: 486.878 bits (1252), Expect = 5.743e-165 Identity = 235/378 (62.17%), Postives = 295/378 (78.04%), Query Frame = 0 Query: 193 GNVLPMNCAICGDKATGKHYGAASCDGCKGFFRRSVRKKQAYICRFYRNCVVTKDKRNQCRFCRLRKCMKAGMKTDSVQHTRDRISSKRSTPESESSNPSISGLSVTTLEKAELLSRHGQHGYDIQKDQLTNREIETKQLASIADIGDSMKQQLLILVEWAKHIPAFCDLSIDDQVALLRAHAGEHLLLGVTRRSLHLNDILLLGNDMIIPKDPQDWGNPWLNDTQDVVVRNIGLRVMNELVTPFRQLLMDDTEFACLKAIVFFDPYARGLTDVGKIERLRYQVQVNLEDYIADRQYDTRGRFGKILLTLPSLQSITWHMIEQISVAKNYGIAHIDNLLQEMLLGGAIYPQNGNGSTPSSPSATSMALSNSMSLTSSL 570 VL +CAICGD+ATGKHYGAASCDGCKGFFRRSVRK Y CRF RNCVV KDKRNQCR+CRLRKC KAGMK ++VQ+ RDRIS +R + E + +N GLSV +L +AE+LSR +++ ++ TKQ+ASI D+ DSMKQQLLILVEWAK+IPAF +L++DDQVALLRAHAGEHLLLGV RRS+HL D+LLLGN+ II K P +QD+ + ++G+RVM+ELV P ++ +DDTEFACLKAIVFFDP A+GL++ G+I++LRYQ+Q+NLEDYI+DRQYD+RGRFG+ILLTLP+LQSI+W MIEQI A+ +G+AHIDNLLQEMLLGGA NG+ S +P+A +S++ S +S L Sbjct: 19 AGVLSQHCAICGDRATGKHYGAASCDGCKGFFRRSVRKNHLYTCRFSRNCVVDKDKRNQCRYCRLRKCFKAGMKKEAVQNERDRISCRRPSYEEQGNNGG--GLSVVSLLQAEMLSRKVGAALELRSPG-NEVDLSTKQIASINDVCDSMKQQLLILVEWAKYIPAFGELTLDDQVALLRAHAGEHLLLGVARRSMHLKDVLLLGNNCIITKTCPVISLPTEGRSQDLDISSVGVRVMDELVKPLNEIQIDDTEFACLKAIVFFDPNAKGLSEPGRIKQLRYQIQINLEDYISDRQYDSRGRFGEILLTLPALQSISWQMIEQIQFARLFGVAHIDNLLQEMLLGGATAEVNGSTSPVPAPNAPGSYVSSNGSPSSPL 393
BLAST of transcription factor hnf-4 homolog vs. nr
Match: gi|1000723348|ref|XP_015610182.1| (PREDICTED: hepatocyte nuclear factor 4-gamma isoform X6 [Cephus cinctus]) HSP 1 Score: 486.878 bits (1252), Expect = 1.021e-164 Identity = 235/378 (62.17%), Postives = 295/378 (78.04%), Query Frame = 0 Query: 193 GNVLPMNCAICGDKATGKHYGAASCDGCKGFFRRSVRKKQAYICRFYRNCVVTKDKRNQCRFCRLRKCMKAGMKTDSVQHTRDRISSKRSTPESESSNPSISGLSVTTLEKAELLSRHGQHGYDIQKDQLTNREIETKQLASIADIGDSMKQQLLILVEWAKHIPAFCDLSIDDQVALLRAHAGEHLLLGVTRRSLHLNDILLLGNDMIIPKDPQDWGNPWLNDTQDVVVRNIGLRVMNELVTPFRQLLMDDTEFACLKAIVFFDPYARGLTDVGKIERLRYQVQVNLEDYIADRQYDTRGRFGKILLTLPSLQSITWHMIEQISVAKNYGIAHIDNLLQEMLLGGAIYPQNGNGSTPSSPSATSMALSNSMSLTSSL 570 VL +CAICGD+ATGKHYGAASCDGCKGFFRRSVRK Y CRF RNCVV KDKRNQCR+CRLRKC KAGMK ++VQ+ RDRIS +R + E + +N GLSV +L +AE+LSR +++ ++ TKQ+ASI D+ DSMKQQLLILVEWAK+IPAF +L++DDQVALLRAHAGEHLLLGV RRS+HL D+LLLGN+ II K P +QD+ + ++G+RVM+ELV P ++ +DDTEFACLKAIVFFDP A+GL++ G+I++LRYQ+Q+NLEDYI+DRQYD+RGRFG+ILLTLP+LQSI+W MIEQI A+ +G+AHIDNLLQEMLLGGA NG+ S +P+A +S++ S +S L Sbjct: 36 AGVLSQHCAICGDRATGKHYGAASCDGCKGFFRRSVRKNHLYTCRFSRNCVVDKDKRNQCRYCRLRKCFKAGMKKEAVQNERDRISCRRPSYEEQGNNGG--GLSVVSLLQAEMLSRKVGAALELRSPG-NEVDLSTKQIASINDVCDSMKQQLLILVEWAKYIPAFGELTLDDQVALLRAHAGEHLLLGVARRSMHLKDVLLLGNNCIITKTCPVISLPTEGRSQDLDISSVGVRVMDELVKPLNEIQIDDTEFACLKAIVFFDPNAKGLSEPGRIKQLRYQIQINLEDYISDRQYDSRGRFGEILLTLPALQSISWQMIEQIQFARLFGVAHIDNLLQEMLLGGATAEVNGSTSPVPAPNAPGSYVSSNGSPSSPL 410
BLAST of transcription factor hnf-4 homolog vs. nr
Match: gi|1000723340|ref|XP_015610179.1| (PREDICTED: hepatocyte nuclear factor 4-gamma isoform X4 [Cephus cinctus]) HSP 1 Score: 486.493 bits (1251), Expect = 1.159e-164 Identity = 235/378 (62.17%), Postives = 295/378 (78.04%), Query Frame = 0 Query: 193 GNVLPMNCAICGDKATGKHYGAASCDGCKGFFRRSVRKKQAYICRFYRNCVVTKDKRNQCRFCRLRKCMKAGMKTDSVQHTRDRISSKRSTPESESSNPSISGLSVTTLEKAELLSRHGQHGYDIQKDQLTNREIETKQLASIADIGDSMKQQLLILVEWAKHIPAFCDLSIDDQVALLRAHAGEHLLLGVTRRSLHLNDILLLGNDMIIPKDPQDWGNPWLNDTQDVVVRNIGLRVMNELVTPFRQLLMDDTEFACLKAIVFFDPYARGLTDVGKIERLRYQVQVNLEDYIADRQYDTRGRFGKILLTLPSLQSITWHMIEQISVAKNYGIAHIDNLLQEMLLGGAIYPQNGNGSTPSSPSATSMALSNSMSLTSSL 570 VL +CAICGD+ATGKHYGAASCDGCKGFFRRSVRK Y CRF RNCVV KDKRNQCR+CRLRKC KAGMK ++VQ+ RDRIS +R + E + +N GLSV +L +AE+LSR +++ ++ TKQ+ASI D+ DSMKQQLLILVEWAK+IPAF +L++DDQVALLRAHAGEHLLLGV RRS+HL D+LLLGN+ II K P +QD+ + ++G+RVM+ELV P ++ +DDTEFACLKAIVFFDP A+GL++ G+I++LRYQ+Q+NLEDYI+DRQYD+RGRFG+ILLTLP+LQSI+W MIEQI A+ +G+AHIDNLLQEMLLGGA NG+ S +P+A +S++ S +S L Sbjct: 28 AGVLSQHCAICGDRATGKHYGAASCDGCKGFFRRSVRKNHLYTCRFSRNCVVDKDKRNQCRYCRLRKCFKAGMKKEAVQNERDRISCRRPSYEEQGNNGG--GLSVVSLLQAEMLSRKVGAALELRSPG-NEVDLSTKQIASINDVCDSMKQQLLILVEWAKYIPAFGELTLDDQVALLRAHAGEHLLLGVARRSMHLKDVLLLGNNCIITKTCPVISLPTEGRSQDLDISSVGVRVMDELVKPLNEIQIDDTEFACLKAIVFFDPNAKGLSEPGRIKQLRYQIQINLEDYISDRQYDSRGRFGEILLTLPALQSISWQMIEQIQFARLFGVAHIDNLLQEMLLGGATAEVNGSTSPVPAPNAPGSYVSSNGSPSSPL 402
BLAST of transcription factor hnf-4 homolog vs. nr
Match: gi|1000723338|ref|XP_015610178.1| (PREDICTED: hepatocyte nuclear factor 4-gamma isoform X3 [Cephus cinctus]) HSP 1 Score: 487.263 bits (1253), Expect = 1.322e-164 Identity = 235/378 (62.17%), Postives = 295/378 (78.04%), Query Frame = 0 Query: 193 GNVLPMNCAICGDKATGKHYGAASCDGCKGFFRRSVRKKQAYICRFYRNCVVTKDKRNQCRFCRLRKCMKAGMKTDSVQHTRDRISSKRSTPESESSNPSISGLSVTTLEKAELLSRHGQHGYDIQKDQLTNREIETKQLASIADIGDSMKQQLLILVEWAKHIPAFCDLSIDDQVALLRAHAGEHLLLGVTRRSLHLNDILLLGNDMIIPKDPQDWGNPWLNDTQDVVVRNIGLRVMNELVTPFRQLLMDDTEFACLKAIVFFDPYARGLTDVGKIERLRYQVQVNLEDYIADRQYDTRGRFGKILLTLPSLQSITWHMIEQISVAKNYGIAHIDNLLQEMLLGGAIYPQNGNGSTPSSPSATSMALSNSMSLTSSL 570 VL +CAICGD+ATGKHYGAASCDGCKGFFRRSVRK Y CRF RNCVV KDKRNQCR+CRLRKC KAGMK ++VQ+ RDRIS +R + E + +N GLSV +L +AE+LSR +++ ++ TKQ+ASI D+ DSMKQQLLILVEWAK+IPAF +L++DDQVALLRAHAGEHLLLGV RRS+HL D+LLLGN+ II K P +QD+ + ++G+RVM+ELV P ++ +DDTEFACLKAIVFFDP A+GL++ G+I++LRYQ+Q+NLEDYI+DRQYD+RGRFG+ILLTLP+LQSI+W MIEQI A+ +G+AHIDNLLQEMLLGGA NG+ S +P+A +S++ S +S L Sbjct: 48 AGVLSQHCAICGDRATGKHYGAASCDGCKGFFRRSVRKNHLYTCRFSRNCVVDKDKRNQCRYCRLRKCFKAGMKKEAVQNERDRISCRRPSYEEQGNNGG--GLSVVSLLQAEMLSRKVGAALELRSPG-NEVDLSTKQIASINDVCDSMKQQLLILVEWAKYIPAFGELTLDDQVALLRAHAGEHLLLGVARRSMHLKDVLLLGNNCIITKTCPVISLPTEGRSQDLDISSVGVRVMDELVKPLNEIQIDDTEFACLKAIVFFDPNAKGLSEPGRIKQLRYQIQINLEDYISDRQYDSRGRFGEILLTLPALQSISWQMIEQIQFARLFGVAHIDNLLQEMLLGGATAEVNGSTSPVPAPNAPGSYVSSNGSPSSPL 422
BLAST of transcription factor hnf-4 homolog vs. nr
Match: gi|1000723331|ref|XP_015610176.1| (PREDICTED: hepatocyte nuclear factor 4-gamma isoform X1 [Cephus cinctus]) HSP 1 Score: 487.263 bits (1253), Expect = 1.877e-164 Identity = 235/376 (62.50%), Postives = 295/376 (78.46%), Query Frame = 0 Query: 195 VLPMNCAICGDKATGKHYGAASCDGCKGFFRRSVRKKQAYICRFYRNCVVTKDKRNQCRFCRLRKCMKAGMKTDSVQHTRDRISSKRSTPESESSNPSISGLSVTTLEKAELLSRHGQHGYDIQKDQLTNREIETKQLASIADIGDSMKQQLLILVEWAKHIPAFCDLSIDDQVALLRAHAGEHLLLGVTRRSLHLNDILLLGNDMIIPKDPQDWGNPWLNDTQDVVVRNIGLRVMNELVTPFRQLLMDDTEFACLKAIVFFDPYARGLTDVGKIERLRYQVQVNLEDYIADRQYDTRGRFGKILLTLPSLQSITWHMIEQISVAKNYGIAHIDNLLQEMLLGGAIYPQNGNGSTPSSPSATSMALSNSMSLTSSL 570 VL +CAICGD+ATGKHYGAASCDGCKGFFRRSVRK Y CRF RNCVV KDKRNQCR+CRLRKC KAGMK ++VQ+ RDRIS +R + E + +N GLSV +L +AE+LSR +++ ++ TKQ+ASI D+ DSMKQQLLILVEWAK+IPAF +L++DDQVALLRAHAGEHLLLGV RRS+HL D+LLLGN+ II K P +QD+ + ++G+RVM+ELV P ++ +DDTEFACLKAIVFFDP A+GL++ G+I++LRYQ+Q+NLEDYI+DRQYD+RGRFG+ILLTLP+LQSI+W MIEQI A+ +G+AHIDNLLQEMLLGGA NG+ S +P+A +S++ S +S L Sbjct: 59 VLSQHCAICGDRATGKHYGAASCDGCKGFFRRSVRKNHLYTCRFSRNCVVDKDKRNQCRYCRLRKCFKAGMKKEAVQNERDRISCRRPSYEEQGNNGG--GLSVVSLLQAEMLSRKVGAALELRSPG-NEVDLSTKQIASINDVCDSMKQQLLILVEWAKYIPAFGELTLDDQVALLRAHAGEHLLLGVARRSMHLKDVLLLGNNCIITKTCPVISLPTEGRSQDLDISSVGVRVMDELVKPLNEIQIDDTEFACLKAIVFFDPNAKGLSEPGRIKQLRYQIQINLEDYISDRQYDSRGRFGEILLTLPALQSISWQMIEQIQFARLFGVAHIDNLLQEMLLGGATAEVNGSTSPVPAPNAPGSYVSSNGSPSSPL 431
BLAST of transcription factor hnf-4 homolog vs. nr
Match: gi|970880079|ref|XP_015109770.1| (PREDICTED: hepatocyte nuclear factor 4-gamma isoform X1 [Diachasma alloeum]) HSP 1 Score: 486.108 bits (1250), Expect = 5.742e-164 Identity = 239/384 (62.24%), Postives = 296/384 (77.08%), Query Frame = 0 Query: 195 VLPMNCAICGDKATGKHYGAASCDGCKGFFRRSVRKKQAYICRFYRNCVVTKDKRNQCRFCRLRKCMKAGMKTDSVQHTRDRISSKRSTPESESSNPSISGLSVTTLEKAELLSRHGQHGYDIQKDQLTNRE--IETKQLASIADIGDSMKQQLLILVEWAKHIPAFCDLSIDDQVALLRAHAGEHLLLGVTRRSLHLNDILLLGNDMIIPKDPQDWGNPWLNDTQDVVVRNIGLRVMNELVTPFRQLLMDDTEFACLKAIVFFDPYARGLTDVGKIERLRYQVQVNLEDYIADRQYDTRGRFGKILLTLPSLQSITWHMIEQISVAKNYGIAHIDNLLQEMLLGGAIYPQNGNGSTP-SSPSATSMALSNSMSLTSSLMNLDT 575 VL +CAICGD+ATGKHYGAASCDGCKGFFRRSVRK Y CRF RNCVV KDKRNQCR+CRLRKC KAGMK ++VQ+ RDRIS +R + E ++SN GLSV +L +AE+LSR ++Q+ + E + KQ+A+I D+ DSMKQQLLILVEWAK+IPAFC+LS+DDQVALLRAHAGEHLLLGV RRS+HLND+LLLGN+ II K P QD+ + +G+RVM+ELV P ++ +DDTEFACLKAIVFFDP A+GL++ +I+ LRYQ+Q+NLEDYI+DRQYD+RGRFG+ILLTLP+LQSI+W MIEQI + +G+AHID+LLQEMLLGGA NG G+TP P A +S++ S +S L +T Sbjct: 64 VLSQHCAICGDRATGKHYGAASCDGCKGFFRRSVRKNHLYTCRFSRNCVVDKDKRNQCRYCRLRKCFKAGMKKEAVQNERDRISCRRPSYEEQTSNGG--GLSVVSLLQAEMLSRQVVAALEVQQLGSPHNETDLSNKQIANINDVCDSMKQQLLILVEWAKYIPAFCELSLDDQVALLRAHAGEHLLLGVARRSMHLNDVLLLGNNCIITKSCPVISLPTEGRNQDLDISRVGIRVMDELVKPLNEVQIDDTEFACLKAIVFFDPNAKGLSEPARIKHLRYQIQINLEDYISDRQYDSRGRFGEILLTLPALQSISWQMIEQIQFVRLFGVAHIDSLLQEMLLGGASTDLNG-GTTPLPVPHAPESYVSSNESPSSPLTPANT 444
BLAST of transcription factor hnf-4 homolog vs. nr
Match: gi|970880087|ref|XP_015109802.1| (PREDICTED: hepatocyte nuclear factor 4-gamma isoform X5 [Diachasma alloeum]) HSP 1 Score: 484.567 bits (1246), Expect = 5.859e-164 Identity = 239/384 (62.24%), Postives = 296/384 (77.08%), Query Frame = 0 Query: 195 VLPMNCAICGDKATGKHYGAASCDGCKGFFRRSVRKKQAYICRFYRNCVVTKDKRNQCRFCRLRKCMKAGMKTDSVQHTRDRISSKRSTPESESSNPSISGLSVTTLEKAELLSRHGQHGYDIQKDQLTNRE--IETKQLASIADIGDSMKQQLLILVEWAKHIPAFCDLSIDDQVALLRAHAGEHLLLGVTRRSLHLNDILLLGNDMIIPKDPQDWGNPWLNDTQDVVVRNIGLRVMNELVTPFRQLLMDDTEFACLKAIVFFDPYARGLTDVGKIERLRYQVQVNLEDYIADRQYDTRGRFGKILLTLPSLQSITWHMIEQISVAKNYGIAHIDNLLQEMLLGGAIYPQNGNGSTP-SSPSATSMALSNSMSLTSSLMNLDT 575 VL +CAICGD+ATGKHYGAASCDGCKGFFRRSVRK Y CRF RNCVV KDKRNQCR+CRLRKC KAGMK ++VQ+ RDRIS +R + E ++SN GLSV +L +AE+LSR ++Q+ + E + KQ+A+I D+ DSMKQQLLILVEWAK+IPAFC+LS+DDQVALLRAHAGEHLLLGV RRS+HLND+LLLGN+ II K P QD+ + +G+RVM+ELV P ++ +DDTEFACLKAIVFFDP A+GL++ +I+ LRYQ+Q+NLEDYI+DRQYD+RGRFG+ILLTLP+LQSI+W MIEQI + +G+AHID+LLQEMLLGGA NG G+TP P A +S++ S +S L +T Sbjct: 22 VLSQHCAICGDRATGKHYGAASCDGCKGFFRRSVRKNHLYTCRFSRNCVVDKDKRNQCRYCRLRKCFKAGMKKEAVQNERDRISCRRPSYEEQTSNGG--GLSVVSLLQAEMLSRQVVAALEVQQLGSPHNETDLSNKQIANINDVCDSMKQQLLILVEWAKYIPAFCELSLDDQVALLRAHAGEHLLLGVARRSMHLNDVLLLGNNCIITKSCPVISLPTEGRNQDLDISRVGIRVMDELVKPLNEVQIDDTEFACLKAIVFFDPNAKGLSEPARIKHLRYQIQINLEDYISDRQYDSRGRFGEILLTLPALQSISWQMIEQIQFVRLFGVAHIDSLLQEMLLGGASTDLNG-GTTPLPVPHAPESYVSSNESPSSPLTPANT 402
BLAST of transcription factor hnf-4 homolog vs. nr
Match: gi|970880083|ref|XP_015109786.1| (PREDICTED: hepatocyte nuclear factor 4-gamma isoform X3 [Diachasma alloeum]) HSP 1 Score: 485.337 bits (1248), Expect = 8.008e-164 Identity = 239/384 (62.24%), Postives = 296/384 (77.08%), Query Frame = 0 Query: 195 VLPMNCAICGDKATGKHYGAASCDGCKGFFRRSVRKKQAYICRFYRNCVVTKDKRNQCRFCRLRKCMKAGMKTDSVQHTRDRISSKRSTPESESSNPSISGLSVTTLEKAELLSRHGQHGYDIQKDQLTNRE--IETKQLASIADIGDSMKQQLLILVEWAKHIPAFCDLSIDDQVALLRAHAGEHLLLGVTRRSLHLNDILLLGNDMIIPKDPQDWGNPWLNDTQDVVVRNIGLRVMNELVTPFRQLLMDDTEFACLKAIVFFDPYARGLTDVGKIERLRYQVQVNLEDYIADRQYDTRGRFGKILLTLPSLQSITWHMIEQISVAKNYGIAHIDNLLQEMLLGGAIYPQNGNGSTP-SSPSATSMALSNSMSLTSSLMNLDT 575 VL +CAICGD+ATGKHYGAASCDGCKGFFRRSVRK Y CRF RNCVV KDKRNQCR+CRLRKC KAGMK ++VQ+ RDRIS +R + E ++SN GLSV +L +AE+LSR ++Q+ + E + KQ+A+I D+ DSMKQQLLILVEWAK+IPAFC+LS+DDQVALLRAHAGEHLLLGV RRS+HLND+LLLGN+ II K P QD+ + +G+RVM+ELV P ++ +DDTEFACLKAIVFFDP A+GL++ +I+ LRYQ+Q+NLEDYI+DRQYD+RGRFG+ILLTLP+LQSI+W MIEQI + +G+AHID+LLQEMLLGGA NG G+TP P A +S++ S +S L +T Sbjct: 53 VLSQHCAICGDRATGKHYGAASCDGCKGFFRRSVRKNHLYTCRFSRNCVVDKDKRNQCRYCRLRKCFKAGMKKEAVQNERDRISCRRPSYEEQTSNGG--GLSVVSLLQAEMLSRQVVAALEVQQLGSPHNETDLSNKQIANINDVCDSMKQQLLILVEWAKYIPAFCELSLDDQVALLRAHAGEHLLLGVARRSMHLNDVLLLGNNCIITKSCPVISLPTEGRNQDLDISRVGIRVMDELVKPLNEVQIDDTEFACLKAIVFFDPNAKGLSEPARIKHLRYQIQINLEDYISDRQYDSRGRFGEILLTLPALQSISWQMIEQIQFVRLFGVAHIDSLLQEMLLGGASTDLNG-GTTPLPVPHAPESYVSSNESPSSPLTPANT 433
BLAST of transcription factor hnf-4 homolog vs. nr
Match: gi|970880085|ref|XP_015109794.1| (PREDICTED: hepatocyte nuclear factor 4-gamma isoform X4 [Diachasma alloeum]) HSP 1 Score: 484.567 bits (1246), Expect = 9.310e-164 Identity = 239/384 (62.24%), Postives = 296/384 (77.08%), Query Frame = 0 Query: 195 VLPMNCAICGDKATGKHYGAASCDGCKGFFRRSVRKKQAYICRFYRNCVVTKDKRNQCRFCRLRKCMKAGMKTDSVQHTRDRISSKRSTPESESSNPSISGLSVTTLEKAELLSRHGQHGYDIQKDQLTNRE--IETKQLASIADIGDSMKQQLLILVEWAKHIPAFCDLSIDDQVALLRAHAGEHLLLGVTRRSLHLNDILLLGNDMIIPKDPQDWGNPWLNDTQDVVVRNIGLRVMNELVTPFRQLLMDDTEFACLKAIVFFDPYARGLTDVGKIERLRYQVQVNLEDYIADRQYDTRGRFGKILLTLPSLQSITWHMIEQISVAKNYGIAHIDNLLQEMLLGGAIYPQNGNGSTP-SSPSATSMALSNSMSLTSSLMNLDT 575 VL +CAICGD+ATGKHYGAASCDGCKGFFRRSVRK Y CRF RNCVV KDKRNQCR+CRLRKC KAGMK ++VQ+ RDRIS +R + E ++SN GLSV +L +AE+LSR ++Q+ + E + KQ+A+I D+ DSMKQQLLILVEWAK+IPAFC+LS+DDQVALLRAHAGEHLLLGV RRS+HLND+LLLGN+ II K P QD+ + +G+RVM+ELV P ++ +DDTEFACLKAIVFFDP A+GL++ +I+ LRYQ+Q+NLEDYI+DRQYD+RGRFG+ILLTLP+LQSI+W MIEQI + +G+AHID+LLQEMLLGGA NG G+TP P A +S++ S +S L +T Sbjct: 38 VLSQHCAICGDRATGKHYGAASCDGCKGFFRRSVRKNHLYTCRFSRNCVVDKDKRNQCRYCRLRKCFKAGMKKEAVQNERDRISCRRPSYEEQTSNGG--GLSVVSLLQAEMLSRQVVAALEVQQLGSPHNETDLSNKQIANINDVCDSMKQQLLILVEWAKYIPAFCELSLDDQVALLRAHAGEHLLLGVARRSMHLNDVLLLGNNCIITKSCPVISLPTEGRNQDLDISRVGIRVMDELVKPLNEVQIDDTEFACLKAIVFFDPNAKGLSEPARIKHLRYQIQINLEDYISDRQYDSRGRFGEILLTLPALQSISWQMIEQIQFVRLFGVAHIDSLLQEMLLGGASTDLNG-GTTPLPVPHAPESYVSSNESPSSPLTPANT 418 The following BLAST results are available for this feature:
BLAST of transcription factor hnf-4 homolog vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of transcription factor hnf-4 homolog vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of transcription factor hnf-4 homolog vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1013_size70870:5764..14669- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1013_size70870-snap-gene-0.16 ID=maker-scaffold1013_size70870-snap-gene-0.16|Name=transcription factor hnf-4 homolog|organism=Tigriopus kingsejongensis|type=gene|length=8906bp|location=Sequence derived from alignment at scaffold1013_size70870:5764..14669- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'transcription factor hnf-4 homolog' has the following synonyms
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