nuclear receptor nhr-48, maker-scaffold120_size336265-snap-gene-1.12 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000005090 (supercontig:LSalAtl2s:LSalAtl2s269:306853:308464:-1 gene:EMLSAG00000005090 transcript:EMLSAT00000005090 description:"augustus_masked-LSalAtl2s269-processed-gene-3.0") HSP 1 Score: 102.064 bits (253), Expect = 2.904e-23 Identity = 41/83 (49.40%), Postives = 57/83 (68.67%), Query Frame = 0 Query: 283 KLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKR 365 +LC VCGD+A GY++NAL CE CK FFRR+ KN ++ C ++ CE+ + RR CQ CRLKKC+ GM+ E ++ + QKR Sbjct: 171 ELCLVCGDRASGYHYNALACEGCKGFFRRSITKNSNYTCKWNGDCEIDMYMRRKCQACRLKKCYATGMRAECVVPERTCIQKR 253
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000012651 (supercontig:LSalAtl2s:LSalAtl2s959:3535:5114:-1 gene:EMLSAG00000012651 transcript:EMLSAT00000012651 description:"maker-LSalAtl2s959-snap-gene-0.24") HSP 1 Score: 85.5001 bits (210), Expect = 5.192e-18 Identity = 42/104 (40.38%), Postives = 62/104 (59.62%), Query Frame = 0 Query: 284 LCAVCGDKALGY-NFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHDGPGSHENS 386 +C VCGDKA + ++ + C SC+AFFRR+ K+ + C C +T+ TR+ CQ CR KKC + GMK W+LS+EEK + + I+ R K G + N+ Sbjct: 90 VCNVCGDKAPDHIHYGGIACFSCRAFFRRSVPKHTTYFCSTDQACMITITTRKNCQFCRYKKCLESGMKPSWVLSEEEKSSRNL-IKYVRKNKTTCGKNVNNNN 192
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000008902 (supercontig:LSalAtl2s:LSalAtl2s554:572309:581835:1 gene:EMLSAG00000008902 transcript:EMLSAT00000008902 description:"maker-LSalAtl2s554-snap-gene-5.6") HSP 1 Score: 84.7297 bits (208), Expect = 1.122e-17 Identity = 38/96 (39.58%), Postives = 52/96 (54.17%), Query Frame = 0 Query: 266 GGKADNDSNDASDKSLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEK 361 G +D D+ D + +LC VCGDK GY++ LTCESCK FF+R K + C C + R+ C CR +KC D+GMK E + D + Sbjct: 168 GVVGQSDQPDSKD-GMEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVADRSCVIDKTQRKRCPYCRFQKCLDVGMKLEAVRHDRMR 262
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000004451 (supercontig:LSalAtl2s:LSalAtl2s231:945915:949068:1 gene:EMLSAG00000004451 transcript:EMLSAT00000004451 description:"snap_masked-LSalAtl2s231-processed-gene-9.18") HSP 1 Score: 82.0333 bits (201), Expect = 7.848e-17 Identity = 34/77 (44.16%), Postives = 47/77 (61.04%), Query Frame = 0 Query: 285 CAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEK 361 C VCGDK G+++ +CESCK FF+R K++ C ++C VT+ TR+ C CR KC +IGMK E I D + Sbjct: 155 CPVCGDKISGFHYGIFSCESCKGFFKRTVQNKKNYVCLRGSQCPVTISTRKKCPACRFDKCLNIGMKLEAIREDRTR 231
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000008071 (supercontig:LSalAtl2s:LSalAtl2s47:304551:317770:1 gene:EMLSAG00000008071 transcript:EMLSAT00000008071 description:"snap_masked-LSalAtl2s47-processed-gene-3.10") HSP 1 Score: 81.6481 bits (200), Expect = 1.018e-16 Identity = 37/90 (41.11%), Postives = 54/90 (60.00%), Query Frame = 0 Query: 283 KLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDE---EKQQKRMKIE 369 + C VCGD A G+++ +CE+CKAFF+R N ++ P SN+CE+ R+ CQ CR +KC +GM KE + D +Q+ R IE Sbjct: 269 RTCLVCGDIASGFHYGVSSCEACKAFFKRTIQGNIEYTXPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIE 358
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000009941 (supercontig:LSalAtl2s:LSalAtl2s649:484085:485655:-1 gene:EMLSAG00000009941 transcript:EMLSAT00000009941 description:"maker-LSalAtl2s649-snap-gene-4.11") HSP 1 Score: 80.1073 bits (196), Expect = 1.631e-16 Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 0 Query: 285 CAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWI 355 C VCGDK+ G ++ TCE CK+FF+R+ +N ++C S C V R CQ CRLKKCF +GM++E + Sbjct: 83 CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYQCRGSKNCPVDQHHRNQCQHCRLKKCFKMGMRREAV 153
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000000733 (supercontig:LSalAtl2s:LSalAtl2s1117:84476:96586:1 gene:EMLSAG00000000733 transcript:EMLSAT00000000733 description:"maker-LSalAtl2s1117-snap-gene-1.23") HSP 1 Score: 80.8777 bits (198), Expect = 2.718e-16 Identity = 34/87 (39.08%), Postives = 53/87 (60.92%), Query Frame = 0 Query: 269 ADNDSNDASDKSLVKL--CAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKE 353 +DSN++ + +++ C VCGDK+ G ++ +TCE CK FFRR+ +++CP C V V R CQ CRL+KC +GM ++ Sbjct: 29 GGSDSNNSVHNAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRD 115
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000012486 (supercontig:LSalAtl2s:LSalAtl2s91:348479:353390:-1 gene:EMLSAG00000012486 transcript:EMLSAT00000012486 description:"maker-LSalAtl2s91-snap-gene-4.8") HSP 1 Score: 77.7962 bits (190), Expect = 2.458e-15 Identity = 31/70 (44.29%), Postives = 46/70 (65.71%), Query Frame = 0 Query: 282 VKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMK 351 ++ C VCGD+A G ++ A++CE CK FF+R+ K ++C + CEVT R CQ CRL+KC +GM+ Sbjct: 217 IEACVVCGDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMR 286
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000009969 (supercontig:LSalAtl2s:LSalAtl2s651:302705:304416:-1 gene:EMLSAG00000009969 transcript:EMLSAT00000009969 description:"maker-LSalAtl2s651-augustus-gene-2.5") HSP 1 Score: 77.0258 bits (188), Expect = 3.313e-15 Identity = 33/72 (45.83%), Postives = 44/72 (61.11%), Query Frame = 0 Query: 284 LCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWI 355 LC VCGDK+ G ++ TCE CK+FF+R ++ F+C C V R CQ CR KKC ++GMKKE + Sbjct: 74 LCVVCGDKSSGKHYGQFTCEGCKSFFKRCVRRSLTFQCRSKKSCPVDQHHRNQCQHCRFKKCLNMGMKKEAV 145
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000008543 (supercontig:LSalAtl2s:LSalAtl2s527:163002:172818:1 gene:EMLSAG00000008543 transcript:EMLSAT00000008543 description:"maker-LSalAtl2s527-augustus-gene-1.53") HSP 1 Score: 77.411 bits (189), Expect = 4.000e-15 Identity = 32/89 (35.96%), Postives = 47/89 (52.81%), Query Frame = 0 Query: 262 VETSGGKADNDSNDASDKSLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGM 350 + SGG DN+ N +S +C +C D+A G ++ +TCE CK FF+R + + C +CE+ R CQ CR +KC GM Sbjct: 261 IHQSGGPGDNN-NPSSQPQQSLVCMICEDRATGLHYGIITCEGCKGFFKRTVQNKRIYTCVADGECEINKAQRNRCQYCRFQKCLQKGM 348
BLAST of nuclear receptor nhr-48 vs. SwissProt
Match: gi|6093861|sp|O54915.1|NR1I2_MOUSE (RecName: Full=Nuclear receptor subfamily 1 group I member 2; AltName: Full=Orphan nuclear receptor PXR; AltName: Full=Pregnane X receptor) HSP 1 Score: 109.383 bits (272), Expect = 1.720e-24 Identity = 49/95 (51.58%), Postives = 65/95 (68.42%), Query Frame = 0 Query: 282 VKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPF-SNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKK 375 +++C VCGDKA GY+FN +TCE CK FFRR +N +CPF CE+T TRR CQ CRL+KC + GMKKE I+SD +Q+R I+ + +K Sbjct: 35 LQICRVCGDKANGYHFNVMTCEGCKGFFRRAMKRNVRLRCPFRKGTCEITRKTRRQCQACRLRKCLESGMKKEMIMSDAAVEQRRALIKRKKREK 129
BLAST of nuclear receptor nhr-48 vs. SwissProt
Match: gi|49066046|sp|Q14994.2|NR1I3_HUMAN (RecName: Full=Nuclear receptor subfamily 1 group I member 3; AltName: Full=Constitutive activator of retinoid response; Short=Constitutive active response; AltName: Full=Constitutive androstane receptor; Short=CAR; AltName: Full=Orphan nuclear receptor MB67) HSP 1 Score: 107.842 bits (268), Expect = 2.027e-24 Identity = 50/100 (50.00%), Postives = 65/100 (65.00%), Query Frame = 0 Query: 276 ASDKSLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKK 375 AS + ++ C VCGD+A GY+FNALTCE CK FFRR K+ CPF+ CEV+ RR C CRL+KC D GM+K+ ILS E +R K + RA++ Sbjct: 2 ASREDELRNCVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCPACRLQKCLDAGMRKDMILSAEALALRRAKQAQRRAQQ 101
BLAST of nuclear receptor nhr-48 vs. SwissProt
Match: gi|146325014|sp|A2T7D9.1|NR1I3_PANTR (RecName: Full=Nuclear receptor subfamily 1 group I member 3; AltName: Full=Constitutive androstane receptor; Short=CAR) HSP 1 Score: 107.457 bits (267), Expect = 2.242e-24 Identity = 50/100 (50.00%), Postives = 65/100 (65.00%), Query Frame = 0 Query: 276 ASDKSLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKK 375 AS + ++ C VCGD+A GY+FNALTCE CK FFRR K+ CPF+ CEV+ RR C CRL+KC D GM+K+ ILS E +R K + RA++ Sbjct: 2 ASREDELRNCVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCPACRLQKCLDAGMRKDMILSAEALALRRAKQAQRRAQQ 101
BLAST of nuclear receptor nhr-48 vs. SwissProt
Match: gi|135713|sp|P18117.1|THBA_XENLA (RecName: Full=Thyroid hormone receptor beta-A; Short=TRbetaA; Short=xTR; AltName: Full=Nuclear receptor subfamily 1 group A member 2-A) HSP 1 Score: 107.457 bits (267), Expect = 3.951e-24 Identity = 48/98 (48.98%), Postives = 62/98 (63.27%), Query Frame = 0 Query: 283 KLCAVCGDKALGYNFNALTCESCKAFFRRNALKNK--DFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHD 378 +LC VCGDKA GY++ +TCE CK FFRR KN + C + KC + VTR CQ+CR KKC +GM + +L D ++ KR IEENR K+R D Sbjct: 17 ELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDNKRLAKRKLIEENREKRRKD 114
BLAST of nuclear receptor nhr-48 vs. SwissProt
Match: gi|1729929|sp|Q02965.2|THB_LITCT (RecName: Full=Thyroid hormone receptor beta; AltName: Full=Nuclear receptor subfamily 1 group A member 2) HSP 1 Score: 107.071 bits (266), Expect = 4.778e-24 Identity = 48/98 (48.98%), Postives = 62/98 (63.27%), Query Frame = 0 Query: 283 KLCAVCGDKALGYNFNALTCESCKAFFRRNALKNK--DFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHD 378 +LC VCGDKA GY++ +TCE CK FFRR KN + C + KC + VTR CQ+CR KKC +GM + +L D ++ KR IEENR K+R D Sbjct: 17 ELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDSKRLAKRKLIEENREKRRKD 114
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|1247043244|gb|PCG77848.1| (hypothetical protein B5V51_6160, partial [Heliothis virescens]) HSP 1 Score: 171.785 bits (434), Expect = 1.395e-44 Identity = 80/128 (62.50%), Postives = 97/128 (75.78%), Query Frame = 0 Query: 280 SLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHDGPGSHENSLESPGPDLSTGSQPPPLVFTI 407 SL K+C VCGDKALGYNFNA++CESCKAFFRRNAL +K+FKCPF+N C +TVVTRRFCQKCRL+KC IGM KE+I+S+E+K +KR KIEENRA+KR P S ++ D S PL T+ Sbjct: 21 SLQKICLVCGDKALGYNFNAISCESCKAFFRRNALASKEFKCPFTNNCVITVVTRRFCQKCRLEKCLSIGMVKEFIMSEEDKAEKRRKIEENRARKRQRDPDDAVTSSKNVKRDDEGDSGLIPLQDTV 148
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|347971484|ref|XP_313130.5| (AGAP004224-PA [Anopheles gambiae str. PEST] >gi|333468689|gb|EAA08573.6| AGAP004224-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 177.948 bits (450), Expect = 3.857e-44 Identity = 77/122 (63.11%), Postives = 97/122 (79.51%), Query Frame = 0 Query: 265 SGGKADNDSNDASDKSLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHDGPGSHENS 386 +G D D+ A++ ++ K+C+VCGDKALGYNFNA+TCESCKAFFRRNAL K F CPF+ C++T+VTRRFCQKCRL+KCF IGMKKE+I+S+E+K KR KIE+NRAKKR + E S Sbjct: 16 NGTMPDGDAAMAANGAISKICSVCGDKALGYNFNAVTCESCKAFFRRNALSTKGFTCPFNENCDITIVTRRFCQKCRLEKCFRIGMKKEYIMSEEDKVLKRKKIEQNRAKKRQSNGSASEGS 137
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|909572319|ref|XP_013141779.1| (PREDICTED: nuclear hormone receptor family member nhr-8 [Papilio polytes]) HSP 1 Score: 172.555 bits (436), Expect = 4.321e-44 Identity = 75/98 (76.53%), Postives = 86/98 (87.76%), Query Frame = 0 Query: 280 SLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRH 377 +L K+C VCGDKALGYNFNA++CESCKAFFRRNAL K+FKCPFSN CE+ VVTRRFCQKCRL+KC IGM KE+I+SDE+K +KR KIEENRAKKR Sbjct: 24 NLQKICLVCGDKALGYNFNAISCESCKAFFRRNALATKEFKCPFSNNCEINVVTRRFCQKCRLEKCLAIGMVKEFIMSDEDKAEKRRKIEENRAKKRQ 121
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|913326435|ref|XP_013194625.1| (PREDICTED: nuclear hormone receptor family member nhr-8-like [Amyelois transitella]) HSP 1 Score: 174.096 bits (440), Expect = 4.930e-44 Identity = 100/240 (41.67%), Postives = 134/240 (55.83%), Query Frame = 0 Query: 280 SLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHDGPGSHENSLESP-----GPDLSTGSQPPPLVFTINNDSSSLERPQARVLPSSRTPTLEDGEPLAKSPRLLDPEASSSQSSPPQFTLIKHELTTSNSPPQNPTLAPLPEALYVQPNLMAFEVQETQIDPSRTGFPSNEPETP 514 +L K+C VCGD+ALGYNFNA++CESCKAFFRRNAL +K+FKCPF+N C++TVVTRRFCQKCRL+KCF IGM KE+I+S+E+K +KR KIEENRA+KR ++++ S D S PP I DS++ PSS + +LD + SS SPP + + + P + P+ E + +L + ET E ETP Sbjct: 24 NLQKICLVCGDRALGYNFNAISCESCKAFFRRNALTSKEFKCPFTNNCDITVVTRRFCQKCRLEKCFSIGMVKEFIMSEEDKAEKRRKIEENRARKRQFCDKESDDNVTSSKNFKRDDDTQVASVPPVPDSVIQYDSTTCS-------PSSTVQS------------MLDADMDSSIHSPPLY----YAPIQNTEIPYTMKVYPIDEKTVISRSLYEHRMMETYRTYDMDSNMYMESETP 240
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|1000211149|gb|KXJ80985.1| (hypothetical protein RP20_CCG022281 [Aedes albopictus]) HSP 1 Score: 177.563 bits (449), Expect = 5.908e-44 Identity = 80/116 (68.97%), Postives = 93/116 (80.17%), Query Frame = 0 Query: 282 VKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHDGPGSHENSLESPGPDLSTG 397 VK+C+VCGDKALGYNFNA+TCESCKAFFRRNAL K F CPFS CE+TVVTRRFCQKCRL KCF IGMKKE+I+S+E+K +KR KIEENR K+ ++G GS N PG + G Sbjct: 221 VKICSVCGDKALGYNFNAMTCESCKAFFRRNALSTKGFTCPFSESCEITVVTRRFCQKCRLDKCFQIGMKKEYIMSEEDKARKRKKIEENRNKRVNNGTGS-SNRANFPGGAMGGG 335
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|768414533|ref|XP_011547775.1| (PREDICTED: nuclear hormone receptor HR96-like [Plutella xylostella]) HSP 1 Score: 172.555 bits (436), Expect = 6.899e-44 Identity = 74/98 (75.51%), Postives = 88/98 (89.80%), Query Frame = 0 Query: 280 SLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRH 377 +L K+C VCGDKALGYNFNA++CESCKAFFRRNAL +K+FKCPF+N C++TVVTRRFCQKCRL KC IGM KE+I+S+E+K +KR KIEENRAKKRH Sbjct: 25 NLQKICLVCGDKALGYNFNAISCESCKAFFRRNALASKEFKCPFTNNCDITVVTRRFCQKCRLVKCLSIGMVKEFIMSEEDKAEKRKKIEENRAKKRH 122
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|914563900|gb|KOB69542.1| (Nuclear receptor HR96 variant 1, partial [Operophtera brumata]) HSP 1 Score: 167.162 bits (422), Expect = 8.978e-44 Identity = 71/98 (72.45%), Postives = 85/98 (86.73%), Query Frame = 0 Query: 280 SLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRH 377 +L K C VCGDKALGYNFNA++CESCKAFFRRNAL +K+ KCPF+N C +TVVTRRFCQKCRL+KC +GM KE+I+SDE+K +KR KIEENRA+KR Sbjct: 21 NLQKTCLVCGDKALGYNFNAISCESCKAFFRRNALTSKELKCPFTNNCVITVVTRRFCQKCRLEKCLSVGMVKEFIMSDEDKAEKRRKIEENRARKRQ 118
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|936684344|ref|XP_014220137.1| (uncharacterized protein LOC106648021 [Trichogramma pretiosum]) HSP 1 Score: 176.022 bits (445), Expect = 1.085e-43 Identity = 81/134 (60.45%), Postives = 102/134 (76.12%), Query Frame = 0 Query: 267 GKADNDSNDASDKSLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHDGPGSHENSLESPGPDLSTGSQP 400 G + S DA+ + K+C VCGDKALGYNFNA++CESCKAFFRRNALKNKDF+CPF+ C++T VTRRFCQKCRL KCF IGM+KE+I+S+E+K KR+KIEENRAKK +NS++ D ++ S P Sbjct: 9 GDDEQRSQDAATREANKICGVCGDKALGYNFNAVSCESCKAFFRRNALKNKDFRCPFTENCKITPVTRRFCQKCRLDKCFLIGMRKEYIMSEEDKVLKRLKIEENRAKKTPSKKHKGDNSIDESTFDDNSTSIP 142
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|1000762259|ref|XP_015604180.1| (PREDICTED: nuclear hormone receptor HR96 [Cephus cinctus]) HSP 1 Score: 175.252 bits (443), Expect = 1.695e-43 Identity = 73/94 (77.66%), Postives = 87/94 (92.55%), Query Frame = 0 Query: 283 KLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKR 376 K+C VCGDKALGYNFNA++CESCKAFFRRNALKNKDF+CPF+ C++TVVTRRFCQKCRL KCF+IGM+KE+I+S+E+K KR KIE+NRAKKR Sbjct: 12 KICGVCGDKALGYNFNAVSCESCKAFFRRNALKNKDFRCPFTENCDITVVTRRFCQKCRLDKCFNIGMRKEYIMSEEDKVLKRQKIEQNRAKKR 105
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|1199390240|ref|XP_021190051.1| (nuclear hormone receptor HR96 isoform X1 [Helicoverpa armigera] >gi|1199390242|ref|XP_021190053.1| nuclear hormone receptor HR96 isoform X2 [Helicoverpa armigera]) HSP 1 Score: 172.555 bits (436), Expect = 1.718e-43 Identity = 98/203 (48.28%), Postives = 125/203 (61.58%), Query Frame = 0 Query: 262 VETSGGKADNDSNDASD--KSLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHDGPGSHENSLESPGPD-------------------LSTGSQPPPLVFT-INND-SSSLERPQARVLPSS-RTPTLEDGEPLAKSP 440 ++ S K D+ S + SL K+C VCGDKALGYNFNA++CESCKAFFRRNAL +K+FKCPF+N C +TVVTRRFCQKCRL+KC IGM KE+I+S+E+K +KR KIEENRA+KR P S ++ D LST P V + ++ND +SL+ PQ PS+ TP E P+ P Sbjct: 1 MDNSSDKKDDTSAQKKEVLSSLQKICLVCGDKALGYNFNAISCESCKAFFRRNALASKEFKCPFTNNCVITVVTRRFCQKCRLEKCLSIGMVKEFIMSEEDKAEKRRKIEENRARKRQRDPDDAVTSSKNVKRDDEGDTGVIPLQDTVIQYDTLSTTCSPSSTVQSPLSNDLDASLQSPQYNYTPSAPVTPGTEQPYPMKIYP 203 The following BLAST results are available for this feature:
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 23
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BLAST of nuclear receptor nhr-48 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of nuclear receptor nhr-48 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold120_size336265:89608..102922- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold120_size336265-snap-gene-1.12 ID=maker-scaffold120_size336265-snap-gene-1.12|Name=nuclear receptor nhr-48|organism=Tigriopus kingsejongensis|type=gene|length=13315bp|location=Sequence derived from alignment at scaffold120_size336265:89608..102922- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'nuclear receptor nhr-48' has the following synonyms
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