nuclear receptor nhr-48, maker-scaffold120_size336265-snap-gene-1.12 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000013004 (supercontig:LSalAtl2s:LSalAtl2s98:942409:953748:1 gene:EMLSAG00000013004 transcript:EMLSAT00000013004 description:"augustus_masked-LSalAtl2s98-processed-gene-9.1") HSP 1 Score: 76.2554 bits (186), Expect = 7.217e-15 Identity = 34/81 (41.98%), Postives = 44/81 (54.32%), Query Frame = 0 Query: 284 LCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQK 364 LCAVCGD A ++ TCE CK FF+R KN + C C V R CQ CR +KC +GM KE + +D K ++ Sbjct: 408 LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRR 488
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000007361 (supercontig:LSalAtl2s:LSalAtl2s418:374353:376789:1 gene:EMLSAG00000007361 transcript:EMLSAT00000007361 description:"maker-LSalAtl2s418-augustus-gene-3.13") HSP 1 Score: 74.7146 bits (182), Expect = 2.104e-14 Identity = 33/86 (38.37%), Postives = 50/86 (58.14%), Query Frame = 0 Query: 282 VKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMK 367 ++ CAVCGD+A G ++ A +C+ CK FFRR+ K + + C + C V R C+ CRLK C GMKK + ++ ++ R K Sbjct: 148 IQNCAVCGDRATGKHYGAASCDGCKGFFRRSVRKERVYGCRQNRACIVNKDKRNNCRYCRLKMCIKAGMKKSAVQNERDRISCRKK 233
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000009940 (supercontig:LSalAtl2s:LSalAtl2s649:353131:422335:-1 gene:EMLSAG00000009940 transcript:EMLSAT00000009940 description:"maker-LSalAtl2s649-augustus-gene-4.7") HSP 1 Score: 74.3294 bits (181), Expect = 2.979e-14 Identity = 31/71 (43.66%), Postives = 44/71 (61.97%), Query Frame = 0 Query: 285 CAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWI 355 C VCGDK+ G ++ TCE CK+FF+R+ + ++C S C + R CQ CRLKKC +GM+KE + Sbjct: 434 CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRALTYQCRGSRSCPIDQHHRNQCQHCRLKKCIKMGMRKEAV 504
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000001919 (supercontig:LSalAtl2s:LSalAtl2s132:616435:622808:1 gene:EMLSAG00000001919 transcript:EMLSAT00000001919 description:"augustus_masked-LSalAtl2s132-processed-gene-6.5") HSP 1 Score: 72.0182 bits (175), Expect = 1.080e-13 Identity = 28/72 (38.89%), Postives = 40/72 (55.56%), Query Frame = 0 Query: 284 LCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWI 355 C++CGD+A G ++ +CE CK FF+R K + C + C + R CQ CR KC D GMK+E + Sbjct: 90 FCSICGDRASGKHYGVYSCEGCKGFFKRTVRKELTYACRENRDCVIDKRQRNRCQYCRYMKCLDTGMKREAV 161
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000010267 (supercontig:LSalAtl2s:LSalAtl2s680:110406:112508:1 gene:EMLSAG00000010267 transcript:EMLSAT00000010267 description:"maker-LSalAtl2s680-augustus-gene-1.19") HSP 1 Score: 71.2478 bits (173), Expect = 2.154e-13 Identity = 51/166 (30.72%), Postives = 76/166 (45.78%), Query Frame = 0 Query: 255 HVDQEETVETSGGKADNDSNDA--SDKSLVKLCAVCGDKALGY-NFNALTCESCKAFFRRNALKN--KDFKCPFSNK-CEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHDGPGSHENSLESPGPDLS----TGSQPPPLVFTINND 410 + DQE E + DS+ ++L +LC +CG+ A + + C SC+AFFRR+ N K F C K C + + TR+ CQ CR +KC GM+ W+ D E++ K+ + N K P P + S +VFTINN+ Sbjct: 75 NADQENFNELNSTTLSEDSSQIIIGRQALPRLCQICGEVAGKHVYYGGQCCTSCRAFFRRSVQNNSYKQFICCSQTKDCIINLKTRKACQLCRFQKCVSAGMRVSWVFPDRERRSKKSAMTLNNNK--------------PPLPSFNDPEGLTSIEVSIVFTINNN 226
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000007741 (supercontig:LSalAtl2s:LSalAtl2s450:172104:174744:-1 gene:EMLSAG00000007741 transcript:EMLSAT00000007741 description:"maker-LSalAtl2s450-snap-gene-2.9") HSP 1 Score: 71.633 bits (174), Expect = 2.375e-13 Identity = 35/132 (26.52%), Postives = 67/132 (50.76%), Query Frame = 0 Query: 247 RRFKMDPLHVDQEETVETSGGKADNDSNDASDKSLVKL-CAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCP----FSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRA 373 ++F++ LH T +T N + + L+ + C VCGD++ G ++ +C+ C FF+R+ + + + C F +C + R C+ CRLKKCFD M K+ + + ++ +++ + N A Sbjct: 69 QKFRLFALHQRNLLTKKTHSKIVVNKTEMGTGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRQRIYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDCSMNKDAVQHERGPRKSKLQKDLNSA 200
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000011907 (supercontig:LSalAtl2s:LSalAtl2s83:639505:641027:-1 gene:EMLSAG00000011907 transcript:EMLSAT00000011907 description:"maker-LSalAtl2s83-augustus-gene-6.22") HSP 1 Score: 70.0922 bits (170), Expect = 4.782e-13 Identity = 45/136 (33.09%), Postives = 71/136 (52.21%), Query Frame = 0 Query: 279 KSLVKLCAVCGDKALGY-NFNALTCESCKAFFRRNALKNKDFK----CPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHDGPGSHENSLESPGPDLSTGSQPPPLVFTINN 409 ++L +LC +CG+ A + + C SC+AFFRR +++N +K C + C + + TR+ CQ CR +KC GM+ W+L D E++ K+ + N ++ P S + PG S VFTINN Sbjct: 100 EALPRLCQICGEVAGKHVYYGGQCCTSCRAFFRR-SVQNNSYKQFSCCSKTEDCIINLQTRKSCQLCRFQKCISAGMRASWVLPDGERRSKKSAMILN-----NNTPLLP--SFDDPG---GLTSLEVSFVFTINN 224
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000008261 (supercontig:LSalAtl2s:LSalAtl2s49:858199:860758:1 gene:EMLSAG00000008261 transcript:EMLSAT00000008261 description:"maker-LSalAtl2s49-augustus-gene-8.3") HSP 1 Score: 69.707 bits (169), Expect = 5.605e-13 Identity = 29/73 (39.73%), Postives = 43/73 (58.90%), Query Frame = 0 Query: 285 CAVCGDKALGY-NFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWIL 356 C +C D A + ++ A+ C SC+AFFRR + N ++ C C +T TR+ CQ CR KC + GMK W++ Sbjct: 63 CHICSDTANDHIHYGAIACXSCRAFFRRAVICNAEYHCSRDKTCFITKETRKHCQFCRFNKCLEAGMKNTWVM 135
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000012291 (supercontig:LSalAtl2s:LSalAtl2s898:43780:47597:-1 gene:EMLSAG00000012291 transcript:EMLSAT00000012291 description:"snap-LSalAtl2s898-processed-gene-0.60") HSP 1 Score: 63.929 bits (154), Expect = 2.026e-12 Identity = 28/55 (50.91%), Postives = 35/55 (63.64%), Query Frame = 0 Query: 73 PSSPDCSPLDYGIWGYVESKACRTPPKSVSDLKASVEEHWAAMDVDYVGKVCPAF 127 P SPD +PLDY +W +E KAC T ++ LK SV E WAAM+ Y+ VC AF Sbjct: 20 PQSPDLNPLDYSVWWQIEKKACATRHPNLDSLKVSVNEQWAAMEDHYIINVCKAF 74
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Match: EMLSAG00000005619 (supercontig:LSalAtl2s:LSalAtl2s301:354064:356113:1 gene:EMLSAG00000005619 transcript:EMLSAT00000005619 description:"maker-LSalAtl2s301-augustus-gene-3.7") HSP 1 Score: 65.855 bits (159), Expect = 9.852e-12 Identity = 31/79 (39.24%), Postives = 43/79 (54.43%), Query Frame = 0 Query: 275 DASDKSLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFK-CPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKK 352 +A D +LC VC + A G++F A TCE CK+FF R + C + +C V R C+ CRL+KC +GM K Sbjct: 47 EAMDPMQNQLCRVCEEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCVVDKKNRTACKACRLRKCIMVGMSK 125
BLAST of nuclear receptor nhr-48 vs. SwissProt
Match: gi|6093861|sp|O54915.1|NR1I2_MOUSE (RecName: Full=Nuclear receptor subfamily 1 group I member 2; AltName: Full=Orphan nuclear receptor PXR; AltName: Full=Pregnane X receptor) HSP 1 Score: 109.383 bits (272), Expect = 1.720e-24 Identity = 49/95 (51.58%), Postives = 65/95 (68.42%), Query Frame = 0 Query: 282 VKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPF-SNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKK 375 +++C VCGDKA GY+FN +TCE CK FFRR +N +CPF CE+T TRR CQ CRL+KC + GMKKE I+SD +Q+R I+ + +K Sbjct: 35 LQICRVCGDKANGYHFNVMTCEGCKGFFRRAMKRNVRLRCPFRKGTCEITRKTRRQCQACRLRKCLESGMKKEMIMSDAAVEQRRALIKRKKREK 129
BLAST of nuclear receptor nhr-48 vs. SwissProt
Match: gi|49066046|sp|Q14994.2|NR1I3_HUMAN (RecName: Full=Nuclear receptor subfamily 1 group I member 3; AltName: Full=Constitutive activator of retinoid response; Short=Constitutive active response; AltName: Full=Constitutive androstane receptor; Short=CAR; AltName: Full=Orphan nuclear receptor MB67) HSP 1 Score: 107.842 bits (268), Expect = 2.027e-24 Identity = 50/100 (50.00%), Postives = 65/100 (65.00%), Query Frame = 0 Query: 276 ASDKSLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKK 375 AS + ++ C VCGD+A GY+FNALTCE CK FFRR K+ CPF+ CEV+ RR C CRL+KC D GM+K+ ILS E +R K + RA++ Sbjct: 2 ASREDELRNCVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCPACRLQKCLDAGMRKDMILSAEALALRRAKQAQRRAQQ 101
BLAST of nuclear receptor nhr-48 vs. SwissProt
Match: gi|146325014|sp|A2T7D9.1|NR1I3_PANTR (RecName: Full=Nuclear receptor subfamily 1 group I member 3; AltName: Full=Constitutive androstane receptor; Short=CAR) HSP 1 Score: 107.457 bits (267), Expect = 2.242e-24 Identity = 50/100 (50.00%), Postives = 65/100 (65.00%), Query Frame = 0 Query: 276 ASDKSLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKK 375 AS + ++ C VCGD+A GY+FNALTCE CK FFRR K+ CPF+ CEV+ RR C CRL+KC D GM+K+ ILS E +R K + RA++ Sbjct: 2 ASREDELRNCVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCPACRLQKCLDAGMRKDMILSAEALALRRAKQAQRRAQQ 101
BLAST of nuclear receptor nhr-48 vs. SwissProt
Match: gi|135713|sp|P18117.1|THBA_XENLA (RecName: Full=Thyroid hormone receptor beta-A; Short=TRbetaA; Short=xTR; AltName: Full=Nuclear receptor subfamily 1 group A member 2-A) HSP 1 Score: 107.457 bits (267), Expect = 3.951e-24 Identity = 48/98 (48.98%), Postives = 62/98 (63.27%), Query Frame = 0 Query: 283 KLCAVCGDKALGYNFNALTCESCKAFFRRNALKNK--DFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHD 378 +LC VCGDKA GY++ +TCE CK FFRR KN + C + KC + VTR CQ+CR KKC +GM + +L D ++ KR IEENR K+R D Sbjct: 17 ELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDNKRLAKRKLIEENREKRRKD 114
BLAST of nuclear receptor nhr-48 vs. SwissProt
Match: gi|1729929|sp|Q02965.2|THB_LITCT (RecName: Full=Thyroid hormone receptor beta; AltName: Full=Nuclear receptor subfamily 1 group A member 2) HSP 1 Score: 107.071 bits (266), Expect = 4.778e-24 Identity = 48/98 (48.98%), Postives = 62/98 (63.27%), Query Frame = 0 Query: 283 KLCAVCGDKALGYNFNALTCESCKAFFRRNALKNK--DFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHD 378 +LC VCGDKA GY++ +TCE CK FFRR KN + C + KC + VTR CQ+CR KKC +GM + +L D ++ KR IEENR K+R D Sbjct: 17 ELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDSKRLAKRKLIEENREKRRKD 114
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|657600340|gb|AID52831.1| (hormone receptor 96 [Tigriopus japonicus]) HSP 1 Score: 276.174 bits (705), Expect = 1.459e-81 Identity = 163/292 (55.82%), Postives = 191/292 (65.41%), Query Frame = 0 Query: 251 MDPLHVDQEETVETSGGKADNDSNDASDKSLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHDGPG-SHENSLESPGPDLS------TGSQPPPLVFTINNDSSSLERPQARVLPSSRTPTLEDGEPLAKSPRLLDPEASSSQ-----------SSPPQFTLIKHELTTSNSPPQNPTLAPLPEAL-YVQPNLMAFEVQETQIDPSRTGFPSNEPETPGLDLTTLVP 523 MDP V +EETVET+ G+ D ++K L K CAVCGDKALGYNFNALTCESCKAFFRRNALKNK+FKCPFSNKCEVT+VTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKR KIE+NRAKKR D P S SL + L+ + F + DS LERPQARVLPSSR P+ +D +P K R PE ++S+ +S Q TLI+HELT SNSPPQ P+ +P Q N++ F VQ+ Q+ S+ P + P LT L P Sbjct: 1 MDPSIVCKEETVETTSGE-DGQKEGKTEKLLNKFCAVCGDKALGYNFNALTCESCKAFFRRNALKNKEFKCPFSNKCEVTLVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRQKIEQNRAKKRQDVPDLSPRTSLAAVASPLTLPHRDVVSPASTSISFPLGTDSIGLERPQARVLPSSRPPSEDDNQPRHKQMRYDIPEDNNSRLGVGDAYSPNDASSEQCTLIRHELTASNSPPQ-PSTTFIPTIQDRTQINMLNFVVQQPQLSSSK-DLPLDASVPPQNPLTRLSP 289
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|1316149246|ref|XP_023219759.1| (nuclear hormone receptor HR96-like isoform X1 [Centruroides sculpturatus] >gi|1316149248|ref|XP_023219760.1| nuclear hormone receptor HR96-like isoform X1 [Centruroides sculpturatus]) HSP 1 Score: 179.104 bits (453), Expect = 5.085e-46 Identity = 100/191 (52.36%), Postives = 126/191 (65.97%), Query Frame = 0 Query: 269 ADNDSNDASDKSLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHDGPGSHENSLESPGPDLSTGSQPPPLVFTINNDSSSLE---RPQARVLPSSRTPTLE---DGEPLAKSPRLLDPEASSSQSS 453 A+N+SN ++ KLC VCGDKA GYNFNA+TCESCKAFFRRNALK K+FKCPF C+V +VTRRFCQKCRLKKCFDIGMKKEWIL+DEEK+ KR KIEENR +KR P S + D+ S + N ++SSL +PQARV + P +E D + L S +++ S+++ Sbjct: 9 ANNNSNLEKSEA-NKLCGVCGDKAFGYNFNAITCESCKAFFRRNALKTKEFKCPFDENCKVNIVTRRFCQKCRLKKCFDIGMKKEWILTDEEKKIKRAKIEENR-QKRILNPDSKQ------LLDIELNSSN-----SCNLETSSLREVTKPQARV-TGIQQPFIESSVDSDYLNNSENIINDIIEKSENN 185
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|926638829|ref|XP_013785448.1| (nuclear hormone receptor HR96-like isoform X1 [Limulus polyphemus] >gi|1238881522|ref|XP_022253743.1| nuclear hormone receptor HR96-like isoform X1 [Limulus polyphemus] >gi|1238881524|ref|XP_022253744.1| nuclear hormone receptor HR96-like isoform X1 [Limulus polyphemus] >gi|1238881526|ref|XP_022253745.1| nuclear hormone receptor HR96-like isoform X1 [Limulus polyphemus] >gi|1238881528|ref|XP_022253746.1| nuclear hormone receptor HR96-like isoform X1 [Limulus polyphemus]) HSP 1 Score: 178.718 bits (452), Expect = 1.519e-45 Identity = 76/102 (74.51%), Postives = 88/102 (86.27%), Query Frame = 0 Query: 283 KLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHDGPGSHE 384 K+C VCGDKALGYNFNA+TCESCKAFFRRNA+K KDFKCPF+N C+V ++TRRFCQKCRLKKCF+IGMKKEWIL+DEEK+ K+ KIEENR K+ P E Sbjct: 15 KICGVCGDKALGYNFNAITCESCKAFFRRNAVKTKDFKCPFNNDCKVDIITRRFCQKCRLKKCFEIGMKKEWILTDEEKRMKKTKIEENRRKRYAPYPSKRE 116
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|1229694102|ref|XP_022129845.1| (nuclear hormone receptor HR96 [Pieris rapae]) HSP 1 Score: 177.948 bits (450), Expect = 1.787e-45 Identity = 81/119 (68.07%), Postives = 97/119 (81.51%), Query Frame = 0 Query: 263 ETSGGKADNDSNDASDKSLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHDGPG 381 ET+G K + SN L K+C +CGD+ALGYNFNA++CESCKAFFRRNAL NK+FKCPFS+ CE+TVVTRRFCQKCRL+KCF +GM KE+I+SDE+K +KR KIEENRAKKR G Sbjct: 11 ETTGQKKEVPSN------LRKVCLICGDRALGYNFNAISCESCKAFFRRNALTNKEFKCPFSDNCEITVVTRRFCQKCRLEKCFAVGMVKEFIMSDEDKAEKRRKIEENRAKKRQILEG 123
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|1344801560|ref|XP_023943266.1| (nuclear hormone receptor HR96 [Bicyclus anynana]) HSP 1 Score: 177.948 bits (450), Expect = 2.304e-45 Identity = 83/127 (65.35%), Postives = 98/127 (77.17%), Query Frame = 0 Query: 251 MDPLHVDQEETVETSGGKADNDSNDASDKSLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRH 377 MD D +T + +G K D + N L K+C VCGDKALGYNFNA++CESCKAFFRRNAL NK FKCPFSN C +TV+TRRFCQKCRL+KC IGM KE+I+S+E+K +KR KIEENRAKKRH Sbjct: 1 MDTTSEDNSKTDDGNGQKKDLNVN------LQKICLVCGDKALGYNFNAISCESCKAFFRRNALVNKQFKCPFSNNCTITVLTRRFCQKCRLEKCLSIGMVKEFIMSEEDKAEKRRKIEENRAKKRH 121
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|1121149237|ref|XP_019561575.1| (PREDICTED: nuclear hormone receptor HR96-like [Aedes albopictus]) HSP 1 Score: 179.489 bits (454), Expect = 6.565e-45 Identity = 80/116 (68.97%), Postives = 93/116 (80.17%), Query Frame = 0 Query: 282 VKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHDGPGSHENSLESPGPDLSTG 397 VK+C+VCGDKALGYNFNA+TCESCKAFFRRNAL K F CPFS CE+TVVTRRFCQKCRL KCF IGMKKE+I+S+E+K +KR KIEENR K+ ++G GS N PG + G Sbjct: 30 VKICSVCGDKALGYNFNAMTCESCKAFFRRNALSTKGFTCPFSESCEITVVTRRFCQKCRLDKCFQIGMKKEYIMSEEDKARKRKKIEENRNKRANNGTGS-SNRANFPGGAMGGG 144
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|1000201632|gb|KXJ74037.1| (hypothetical protein RP20_CCG014509 [Aedes albopictus]) HSP 1 Score: 179.104 bits (453), Expect = 7.166e-45 Identity = 80/116 (68.97%), Postives = 93/116 (80.17%), Query Frame = 0 Query: 282 VKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHDGPGSHENSLESPGPDLSTG 397 VK+C+VCGDKALGYNFNA+TCESCKAFFRRNAL K F CPFS CE+TVVTRRFCQKCRL KCF IGMKKE+I+S+E+K +KR KIEENR K+ ++G GS N PG + G Sbjct: 26 VKICSVCGDKALGYNFNAMTCESCKAFFRRNALSTKGFTCPFSESCEITVVTRRFCQKCRLDKCFQIGMKKEYIMSEEDKARKRKKIEENRNKRANNGTGS-SNRANFPGGAMGGG 140
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|1121112415|ref|XP_019545918.1| (PREDICTED: nuclear hormone receptor HR96 [Aedes albopictus]) HSP 1 Score: 179.104 bits (453), Expect = 8.530e-45 Identity = 80/116 (68.97%), Postives = 93/116 (80.17%), Query Frame = 0 Query: 282 VKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHDGPGSHENSLESPGPDLSTG 397 VK+C+VCGDKALGYNFNA+TCESCKAFFRRNAL K F CPFS CE+TVVTRRFCQKCRL KCF IGMKKE+I+S+E+K +KR KIEENR K+ ++G GS N PG + G Sbjct: 30 VKICSVCGDKALGYNFNAMTCESCKAFFRRNALSTKGFTCPFSESCEITVVTRRFCQKCRLDKCFQIGMKKEYIMSEEDKARKRKKIEENRNKRANNGTGS-SNRANFPGGAMGGG 144
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|1247043245|gb|PCG77849.1| (hypothetical protein B5V51_6160, partial [Heliothis virescens]) HSP 1 Score: 172.17 bits (435), Expect = 1.128e-44 Identity = 80/128 (62.50%), Postives = 97/128 (75.78%), Query Frame = 0 Query: 280 SLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKKRHDGPGSHENSLESPGPDLSTGSQPPPLVFTI 407 SL K+C VCGDKALGYNFNA++CESCKAFFRRNAL +K+FKCPF+N C +TVVTRRFCQKCRL+KC IGM KE+I+S+E+K +KR KIEENRA+KR P S ++ D S PL T+ Sbjct: 21 SLQKICLVCGDKALGYNFNAISCESCKAFFRRNALASKEFKCPFTNNCVITVVTRRFCQKCRLEKCLSIGMVKEFIMSEEDKAEKRRKIEENRARKRQRDPDDAVTSSKNVKRDDEGDSGLIPLQDTV 148
BLAST of nuclear receptor nhr-48 vs. nr
Match: gi|410591543|gb|AFV74663.1| (estradiol receptor-like protein 1, partial [Portunus trituberculatus]) HSP 1 Score: 166.777 bits (421), Expect = 1.181e-44 Identity = 70/100 (70.00%), Postives = 87/100 (87.00%), Query Frame = 0 Query: 276 ASDKSLVKLCAVCGDKALGYNFNALTCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGMKKEWILSDEEKQQKRMKIEENRAKK 375 +++ K C VCGD+ALGYNFNA+TCESCKAFFRRNALKNK+F+CPF +C V VTRRFCQKCRL+KC +IGMKKEWI+++EEK++K+ KIEENRA+K Sbjct: 2 GREETRAKKCGVCGDRALGYNFNAITCESCKAFFRRNALKNKEFRCPFQGQCRVDQVTRRFCQKCRLRKCLEIGMKKEWIMTEEEKRRKKQKIEENRARK 101 The following BLAST results are available for this feature:
BLAST of nuclear receptor nhr-48 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 23
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BLAST of nuclear receptor nhr-48 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of nuclear receptor nhr-48 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold120_size336265:89608..102922- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold120_size336265-snap-gene-1.12 ID=maker-scaffold120_size336265-snap-gene-1.12|Name=nuclear receptor nhr-48|organism=Tigriopus kingsejongensis|type=gene|length=13315bp|location=Sequence derived from alignment at scaffold120_size336265:89608..102922- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'nuclear receptor nhr-48' has the following synonyms
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