BLAST of abc transporter permease vs. L. salmonis genes
Match: EMLSAG00000003104 (supercontig:LSalAtl2s:LSalAtl2s174:364234:370462:-1 gene:EMLSAG00000003104 transcript:EMLSAT00000003104 description:"maker-LSalAtl2s174-augustus-gene-3.18")

HSP 1 Score: 135.961 bits (341), Expect = 1.138e-32
Identity = 85/301 (28.24%), Postives = 166/301 (55.15%), Query Frame = 0

Query:  338 LTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELD-VKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEGKFAKKYKGSAILGIAMLP 637
            LT+G++         L++PL  LG +    ++ ++ +Q +  ++            TE++ + +++  + +  ++ F Y+  ++ I + +SF + +GK I ++G  GSGK+TLV  L    +    S+ +G+ ++   +   LRR +  V QD  LF+ T+  NI++G  +   +   V +V +L+++ N +  +  G  T VGE+G+ LSGG+KQR++IARA L+ + +II D   S++D  TE  I++ L      ++ ++++HR++ + + DEI VL+ GK  ++     +L    LP
Sbjct:  295 LTVGDLIMVNGLLFQLSLPLNFLGSVYREIRQSLIDMQVMFQLMATPSKITSSKGATEINFINNMEDASITFDDVKFGYN-IDKNIANGLSFSVESGKTIAIVGESGSGKSTLVRLLYRFYEPQLGSIKIGNYNINEVTLDSLRRQISIVPQDCVLFNDTIFHNIKYG--NLNCSDEDVYKVAKLAEIDNAIRSWPQGYLTQVGERGLKLSGGEKQRVAIARAALKDSPIIIFDEATSSLDSITETMIMKALKRVTSGKTAIIIAHRLSTVVHADEIFVLSNGKVIERGTHEELLNTLTLP 592          

HSP 2 Score: 80.4925 bits (197), Expect = 1.487e-15
Identity = 38/77 (49.35%), Postives = 55/77 (71.43%), Query Frame = 0

Query:  959 GIELAVAQGGQLMMLDEATSSVDSITEDLIQKAMQRLFKEKTVIAIAHRLSTVRHSDTILVLEKGEIVEQGSHQPLV 1035
             I  A  +   +++ DEATSS+DSITE +I KA++R+   KT I IAHRLSTV H+D I VL  G+++E+G+H+ L+
Sbjct:  510 AIARAALKDSPIIIFDEATSSLDSITETMIMKALKRVTSGKTAIIIAHRLSTVVHADEIFVLSNGKVIERGTHEELL 586          

HSP 3 Score: 59.3066 bits (142), Expect = 5.740e-9
Identity = 46/157 (29.30%), Postives = 81/157 (51.59%), Query Frame = 0

Query:  805 GITSITIAIMIWYGSEQVIEGALTLGVLIAFINTLEKVFVPIRDFTSQIASIQSSFAAFDHIEELFVEPTEEEGRNLLPSNKVEQQLKNFV------SLEFKNVSFRYKDDSPYVLKSVSFMLEKGHQIALVGSTGSGKSTILRLISKTYQDYEGSI 955
             I S+ ++ ++   ++ +  GALT+G LI     L ++ +P+    S    I+ S      + +L   P++      + S+K   ++ NF+      S+ F +V F Y  D   +   +SF +E G  IA+VG +GSGKST++RL+ + Y+   GSI
Sbjct:  273 AIFSVALSAIMMMAAKDISNGALTVGDLIMVNGLLFQLSLPLNFLGSVYREIRQSLIDMQVMFQLMATPSK------ITSSKGATEI-NFINNMEDASITFDDVKFGYNIDKN-IANGLSFSVESGKTIAIVGESGSGKSTLVRLLYRFYEPQLGSI 421          

BLAST of abc transporter permease vs. L. salmonis genes
Match: EMLSAG00000007660 (supercontig:LSalAtl2s:LSalAtl2s445:12562:17493:1 gene:EMLSAG00000007660 transcript:EMLSAT00000007660 description:"maker-LSalAtl2s445-augustus-gene-0.18")

HSP 1 Score: 128.257 bits (321), Expect = 1.365e-30
Identity = 90/313 (28.75%), Postives = 165/313 (52.72%), Query Frame = 0

Query:  317 ANDLMKIIILGL---GGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELDVKSLKGKTFSIRNLSFRY-SGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDV-PERSVFLGDRDVTSFSRSDLR-RYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEGKFAK 623
            +N  +  I+LG    GGY++    L  G++ +FL     +   + Q+  +     +GM     +   +  KVP +      ++   S  G     +N++F Y +  E+ +L + S  IP  K + ++G  G GKTT+   L    D+    S+ +   ++     S LR   +  + Q+P LF+ +V +NIR+G  +     ++V E  + + + + V  F  G  T++GE+G+ +SGGQKQR++IARALL+   ++I+D   SA+D E+ER + E L    + ++ LV++HR++ ++  D I V+++G  A+
Sbjct:  343 SNFFLNSIVLGTITYGGYLMSDDNLNPGQLMSFLVSVQTIQRSITQVSLLFGHLVKGMASGSRIFEYIE-KVPLIPISGGVKIPYHSFFGDV-EFKNITFSYPTRPEQAVLKDFSLRIPPSKTVALVGTSGGGKTTIAALLERFYDINGGGSLEIDGINIRDLDPSWLRGSAIGYINQEPVLFATSVIENIRYGRPNA--TDNEVYEAAKAAHVDDFVRTFPDGYSTILGERGVTVSGGQKQRIAIARALLKNPPILILDEATSALDAESERIVQEALDKLSKGRTSLVIAHRLSTIKNADVIAVIDKGVMAE 651          

HSP 2 Score: 75.485 bits (184), Expect = 4.500e-14
Identity = 35/89 (39.33%), Postives = 63/89 (70.79%), Query Frame = 0

Query:  959 GIELAVAQGGQLMMLDEATSSVDSITEDLIQKAMQRLFKEKTVIAIAHRLSTVRHSDTILVLEKGEIVEQGSHQPLVAHNGIYAGLLKE 1047
             I  A+ +   +++LDEATS++D+ +E ++Q+A+ +L K +T + IAHRLST++++D I V++KG + E G+H  L    GIY+ L+++
Sbjct:  583 AIARALLKNPPILILDEATSALDAESERIVQEALDKLSKGRTSLVIAHRLSTIKNADVIAVIDKGVMAEIGTHAALKRKGGIYSRLIEQ 671          

HSP 3 Score: 68.1662 bits (165), Expect = 7.710e-12
Identity = 74/355 (20.85%), Postives = 143/355 (40.28%), Query Frame = 0

Query:  668 EYVFYMVIVLVVSYVVDTIYSYNLRKTGQYTITDMRSVLFARVLKLPRSYFDNTPIGVTLSRLTSDLETIGETFIQSVVGLVKDSINTIALLVMMFFIDWQLTLIVLVIMPPVMYLTVYVRNRLRALYKVTRSTLARGIT-------------------------------------SITIAIMIWYGSEQVIEGALTLGV-----------------LIAFINTLEKVFVPIRD----FTSQIASIQSSFAAFDHIEELFVEPTEEEGRNLLPSNKVEQQLKNFVSLEFKNVSFRYKD-DSPYVLKSVSFMLEKGHQIALVGSTGSGKSTILRLISKTYQ-DYEGSILLNGIEL 962
            E    M+       +    Y Y+L   G+     +R  LF  ++    ++FD    G  +SRL++D++    +F   +   ++ S      +V M+ I  Q+T  + VI+P V+    Y+ + LR L K  ++ +A+                                        ++ + I ++ G+      ++ LG                  L++F+ +++ +   I      F   +  + S    F++IE++ + P    G   +P +        F  +EFKN++F Y       VLK  S  +     +ALVG++G GK+TI  L+ + Y  +  GS+ ++GI +
Sbjct:  154 EPTLSMIKFYAAQSICTIAYIYSLACLGERMAASLRKDLFNSIICQDIAFFDEHKTGEIVSRLSADVQEFKSSFKLVISQGLRSSAQASGCIVSMYMISPQMTSAMGVIVPTVILGGTYIGSYLRVLSKKAQAQVAKATAVGEECISNIRTVRGFAMEDAEMELYSREVDKTRDFNEALGLGIGVFQGASNFFLNSIVLGTITYGGYLMSDDNLNPGQLMSFLVSVQTIQRSITQVSLLFGHLVKGMASGSRIFEYIEKVPLIPI--SGGVKIPYHSF------FGDVEFKNITFSYPTRPEQAVLKDFSLRIPPSKTVALVGTSGGGKTTIAALLERFYDINGGGSLEIDGINI 500          

BLAST of abc transporter permease vs. L. salmonis genes
Match: EMLSAG00000000090 (supercontig:LSalAtl2s:LSalAtl2s1014:9799:23913:-1 gene:EMLSAG00000000090 transcript:EMLSAT00000000090 description:"maker-LSalAtl2s1014-snap-gene-0.6")

HSP 1 Score: 129.028 bits (323), Expect = 1.388e-30
Identity = 171/755 (22.65%), Postives = 308/755 (40.79%), Query Frame = 0

Query:  353 LAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELDVKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILE---GLFTRLENQSVLVVSHRVNALEYMDEIIVLNEG-----------------KFAKKYKGS--------------------------------AILGIAMLPFSVITSLLFPWLIIQVIDV----------HLSQGDM-DGLLEYVF-------YMVIVLVVSYVVDTIY--------SYNLRKTGQYTITDMRSVLFARVLKLPRSYFDNTPIGVTLSRLTSDLE--------TIGETFIQSVVGLVKDSINTIALLVMMFFIDWQLTLIVLVIMPPVMYLTVYVR----NRLRALYKVTRSTLARGITSITIAIMIWYGSE--------------------QVIEGA-------LTLGVLIAFINTLEKVFVP-------------------IRD---FTSQIASIQSSFAAFDHIEELFVEPTEEEGRNLLPS--NKVEQQLKNFVS---LEFKNVSFRYKDDSPYVLKSVSFMLEKGHQIALVGSTGSGKSTILRLISKTYQDYEGSILLNGIELA 963
            + +P   L    +   +G+V I+ + + LN +  E+D  K  +          +SI+     YS ++  +L NI+F    G+   V+G +GSGK+ L+  L   L+   +   L ++D+              VTQ+ +L SAT+ DNI FG        SQ  +V+ L QL  D      GD T +   G  LSGGQ+QR+  ARA+ Q   + +MD+ LSA D   + +I     G    L+ ++ L+++++ + +  MD IIV+  G                 K + K +GS                                 +L +  +PF +    L  +LI Q  DV          +LS  ++ D    +++       Y+V+  ++ +     Y        S +L+ +  +       V+  +V   P ++F +TP G  ++R + D++        T+     Q+V  L    I  IA  +  FFI   L LI + ++   +  + +++     +L  + K    +   G T+I       YG E                    ++I  A       L  G  I  + T   VF P                   ++D   FT   A I+ +  + + I+E      ++    LLPS      ++ KN  S   ++F++ S +Y       +K+ +  +  G ++ +VG TGSGKS+++  +S   +  +G I ++G++++
Sbjct:    1 MRIPFRLLPSCISALSQGIVSIKRIDSYLNRE--EVDSVKSNDFSKSPRPEDGYSIQVQDCNYSIDKLKLLKNINFSTRVGELTAVVGKVGSGKSCLLAALCGELNQRGKGSSLINKDLV------------YVTQNIWLKSATIRDNITFGQ---PYNSSQYQKVVSLCQLGQDFKDMYRGDLTYLASNGSTLSGGQRQRIGFARAIYQNAQVYLMDDPLSACDSNLKAQIFHNTIGPKGFLQKKTRLLITNQSSLIPLMDRIIVIQNGTVEEKDSAEEVKSFEIAKKSTKKQGSFHEPPKDNYLHPALDNYDIIERRKIPFSLYKYYVLNLGTVPFIIA---LVGYLISQCFDVCSKLWLSRWTNLSSTNINDTNYRHIYNEDTRNMYIVVYGILGWCQSLAYFLSVLLINSRSLKASSHF-----HDVILRKVFGAPLNFFWSTPKGTIINRFSKDMDEADMFLPNTLKNFAYQAVKILGTLIIALIAFPITAFFIVCPLGLIFIEVVKSYLMASRFLKRTSATKLAMVLKHFGDSAVHGGTTIRC-----YGVESDYIDEHMSLIDEHQSVSLMEIISEAXLFLRLQLIAGTFIGILAT-ALVFFPSEGNSSSLSALSLTSSLTVLQDIFLFTRYAAFIEKAMVSIERIKECEDLIPQDPSSGLLPSIITNGSKRPKNHQSRYYIQFEDFSGKYSSLKNASIKNFTLNVRLGEKVGVVGRTGSGKSSLILALSGLLEVEKGKIFIDGVDMS 724          

HSP 2 Score: 86.2705 bits (212), Expect = 2.680e-17
Identity = 59/214 (27.57%), Postives = 109/214 (50.93%), Query Frame = 0

Query:  410 NLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEGKFAK 623
            + S +YS  +   + N + ++  G+K+GV+G  GSGK++L+  L+  L+V +  +F+   D++S +  ++R+  K +T D  LF  ++  N+     D       +  VL+ +Q+     +   G    + E G  +S             L  ++LIIMD   SA+  E+E +IL   F+R  + ++ V++HR+  L   D+I+VL  G  A+
Sbjct:  662 DFSGKYSSLKNASIKNFTLNVRLGEKVGVVGRTGSGKSSLILALSGLLEVEKGKIFIDGVDMSSGTARNIRK--KDIT-DAALFKGSIRYNL---DPDDRFTDEYIWSVLDEAQMKEFFVQLPGGLDFSLKENGSNIS-------------LAGSNLIIMDEAXSAMTLESEERILNTYFSRFSSSTIFVIAHRIQPLLACDKILVLENGTIAE 856          

BLAST of abc transporter permease vs. L. salmonis genes
Match: EMLSAG00000002221 (supercontig:LSalAtl2s:LSalAtl2s1420:21426:31801:1 gene:EMLSAG00000002221 transcript:EMLSAT00000002221 description:"maker-LSalAtl2s1420-augustus-gene-0.12")

HSP 1 Score: 124.405 bits (311), Expect = 6.733e-29
Identity = 119/482 (24.69%), Postives = 229/482 (47.51%), Query Frame = 0

Query:  156 EAA--LKSTLLQKLNRLPNSFHERFASGRLISIINNDLGGIRLLFGV---GFLQFFNALLA-----LSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKALHLEHMKRLQNLS-AQLMSY----LSGIDLIKSQQMSPWAKSETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAK--VPELDEDKLTELDVKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEGK 620
            EAA  L + +L+ + + P SF +    GR+++ +  DL  +  +  +   G++  F  +L+     +  TP++            IIP S+  + +    +R+       +KRL++ S + + S+    +SG   I++   S    SE+E       +     T    +    L+   +L+      L   +L R  L+ G +   ++Y++ +   L  L R+A+  +  +V ++ +Q    A+   P + ED  T+ D    +    S +N S RY      +L N+S DI  G+KIG++G  G+GK++    +   ++    ++ +   D+T      LR  +  + QDP LFS ++  N+       E  ++ + E +  S L   +   + G +  V E G  LS GQ+Q + +ARALL+ T ++I+D   +AVD ET+  I + + +  ++ +V+ ++HR+N +    +I+VL  G+
Sbjct: 1070 EAAQRLHNQMLESILKSPMSFFDTTPQGRILNRLGKDLDVLDSVMPMVLRGWISCFLGVLSSLIVVMVTTPVF------------IIPASLIIICYFF-IQRIYVATSRQLKRLESSSRSPIXSFFSETVSGAATIRAYGQSSTFISESESKVDDNQKANFPATVSNRWLAVRLEVVGNLIVFTAALLA--VLGRDSLSPGLVGLSVSYALAVTASLNWLVRMASEVETNIVAVERIQEYTKAEKEAPWIIED--TKPDEDWPRKGEISFKNYSTRYREGLDYVLKNVSLDIEGGEKIGIVGRTGAGKSSFTLSMFRIIEPVTGNIIIDGVDITKLGLHQLRSRITIIPQDPVLFSGSLRRNL---DPLDEYNETNIMEAISHSHLKPFIDSLKDGLEYHVSEGGENLSLGQRQLICLARALLRRTRVLILDEATAAVDLETDNLIQKTIRSEFKDSTVITIAHRLNTIMDYSKILVLKNGE 1531          

HSP 2 Score: 123.635 bits (309), Expect = 1.022e-28
Identity = 123/507 (24.26%), Postives = 240/507 (47.34%), Query Frame = 0

Query:  136 AMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLPNSFHERFASGRLISIINNDLGGIRLLFGVGFLQFFN----ALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGF--KRMKALHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWAKSETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMK------IIILGLGGYMLMRQELTLGEITAF--LTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELDVKSLKGKTFSIRNLSFRY-SGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTR----LENQSVLVVSHRVNALEYMDEIIVLNEGKFAK 623
            ++V+ +   ++Y +  G   + +L ST+ +K  R+P S  +  ++G ++++++ D   I     V  + + N    A   +++    +W+      L  ++ + I  + F  GF   R K L    MK        L   + GI ++K   +  W +S  + ++ +    R K  +I +  +  L   N  +       + ++    ++L   E  L    AF  LT   +L  PL  L  I        V I+ +   +N++  E+DE+ + +           ++     ++ S E++ IL ++S DI  G  + V+G +GSGK++L+            S  LG+ D  S     +R  +    Q  ++ + ++++NI F  S       +   ++E   L +D+     GD+T +GEKGI LSGGQKQR+S+ARA+   +D+ ++D+ LSAVD    + I + + +     L++++ ++V+H V  L + D+IIV+ +G+ ++
Sbjct:  371 SLVLSKFFYKMYVV--GMKIKTSLISTIYRKALRVPTSTKKNISTGEIVNLMSVDAQKI-----VDLMPYINTVWSAPFQITIAIYLLWQTLGPSVLAGVL-VMILLIPFN-GFIASRTKTLQTNQMKEKDERIKLLNEVVQGIKIVK---LYAWEQSFLDIISNV----RSKEVKI-LTHIGYLQAGNSFIWTCAPFLVSLVTFATFILSSPENVLDSEKAFVCLTLFNILRFPLSMLPMIIGSMVLAGVSIKRINKFMNSE--EIDEEAVEKKTAYPDDKFAINLEKACLKWESDEDKNILSDVSLDIEVGSLVAVVGTVGSGKSSLL------------SAILGEMDKVS-GLITVRGSIAYGAQQAWVLNTSLKNNILFNKS---YDGDKYTRIVEACALKSDLDMLPGGDETEIGEKGINLSGGQKQRVSLARAVYSGSDIYLLDDPLSAVDSHVGKHIYDNVISSSSGILKDKTRVMVTHGVTYLPFTDKIIVMKDGRVSE 842          

HSP 3 Score: 67.0106 bits (162), Expect = 2.689e-11
Identity = 43/122 (35.25%), Postives = 68/122 (55.74%), Query Frame = 0

Query:  936 GKSTILRLISKTYQDYEGSILLNGIELAVAQGGQ---------------------LMMLDEATSSVDSITEDLIQKAMQRLFKEKTVIAIAHRLSTVRHSDTILVLEKGEIVEQGSHQPLVA 1036
             ++ I+  IS ++       L +G+E  V++GG+                     +++LDEAT++VD  T++LIQK ++  FK+ TVI IAHRL+T+     ILVL+ GE VE G+   L+A
Sbjct: 1422 NETNIMEAISHSHLKPFIDSLKDGLEYHVSEGGENLSLGQRQLICLARALLRRTRVLILDEATAAVDLETDNLIQKTIRSEFKDSTVITIAHRLNTIMDYSKILVLKNGERVEYGTVAELLA 1543          

HSP 4 Score: 58.9214 bits (141), Expect = 7.797e-9
Identity = 31/109 (28.44%), Postives = 62/109 (56.88%), Query Frame = 0

Query:  854 ASIQSSFAAFDHIEELFVEPTEEEGRNLLPSNKVEQQLKNFVSLEFKNVSFRYKDDSPYVLKSVSFMLEKGHQIALVGSTGSGKSTILRLISKTYQDYEGSILLNGIEL 962
            + ++++  A + I+E      E+E   ++   K ++       + FKN S RY++   YVLK+VS  +E G +I +VG TG+GKS+    + +  +   G+I+++G+++
Sbjct: 1279 SEVETNIVAVERIQEY--TKAEKEAPWIIEDTKPDEDWPRKGEISFKNYSTRYREGLDYVLKNVSLDIEGGEKIGIVGRTGAGKSSFTLSMFRIIEPVTGNIIIDGVDI 1385          

BLAST of abc transporter permease vs. L. salmonis genes
Match: EMLSAG00000003611 (supercontig:LSalAtl2s:LSalAtl2s197:49356:53594:-1 gene:EMLSAG00000003611 transcript:EMLSAT00000003611 description:"augustus_masked-LSalAtl2s197-processed-gene-0.4")

HSP 1 Score: 119.398 bits (298), Expect = 2.186e-27
Identity = 78/282 (27.66%), Postives = 145/282 (51.42%), Query Frame = 0

Query:  341 GEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAKV-PELDEDKLTELDVKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVD--EVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEG 619
            G++   ++Y+++L   L  L R  +  +  +V ++ ++      +  E    K T  +  S +GK    +N S RY      +L  I+F I  G+++G++G  G+GK++L   L   ++     + +  +D+++    DLR  +  + Q+P LFS T+  N+     D E A S  D    L    L   +   + G    + E G+ LS GQ+Q + +ARALL+   ++I+D   +AVD+ET+ KI E +     + ++L ++HR+  +   D+I+VL++G
Sbjct: 1095 GKVGLVISYALILTQNLNWLXRQTSEIETNIVAVERLKEYAGLDIEKEWRLHKDTSYNWPS-QGKV-EFKNYSLRYKANSDLVLKKINFTIFGGERVGIVGRTGAGKSSLSVALFRIVEAANGQILIDGKDISTLGLHDLRESLTVIPQEPLLFSGTLRSNL-----DPENAFSDHDIWNTLGSVHLKEYIRDLKDGLNHSISEGGLNLSSGQRQLMCLARALLRSCKILILDEATAAVDWETDEKIQETIRCYFPSCTILTIAHRLKTIIDYDKILVLDKG 1369          

HSP 2 Score: 114.775 bits (286), Expect = 6.004e-26
Identity = 112/482 (23.24%), Postives = 229/482 (47.51%), Query Frame = 0

Query:  157 AALKSTLLQKLNRLPNSFHERFASGRLISIINNDLGGIRLLFGVGFLQF-FNALLALSLTPLYMWR------ISPELTLYSIIPISIAFVIFRVGFKRMKALHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWAKSETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVL--LAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDEDKLT----ELDVKSLKGKTFSIRNLSFRYSGEE-RTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTR----LENQSVLVVSHRVNALEYMDEIIVLNEGK 620
            A+L S + +K  +L NS  +  + G +++I++ D+  I  L  + FL   +++   + ++ ++M+       I     L   IP++     F       K   ++ MK   N +  L   L GI ++K     P   ++ E +  + +    K   +  F   +  +++    + +     ++++     L    AF+T S +  + MP+     +        V ++ +  +L +   EL +D +     +++ K  +G    IR+ +F++S E+    L NI+  I  G    ++G +GSGK++L+            S  LG+  V    +  ++  +  V Q+ ++ + ++++NI FG    E      ++VLE   L  D++    GD+T +GE+GI LSGGQ+QR+S+ARA+    D+ I DN LSA+D +  + +   +       +++++ L+V+H ++ L ++  I V+ +G+
Sbjct:  303 ASLTSLVYRKCLKLSNSSRKNKSVGEIVNIMSVDVSRIADL--MPFLTLLWSSPFQIVVSVIFMYNELGWAIIGGTGILLITIPVNAILSYFG------KKFQMKQMKAKDNRTKILNEVLGGIRILKLYAWEPSYINKIEGIRGVEIGILKKAAWLTSFMGFI--WSSTPFIVALASFATFVMVDDRNILTAEKAFVTQSYINKMKMPMAXFPFVIVXAISATVSLKRINQLLTSD--ELQKDAVERVPMKINQKIDQGDAIVIRDGNFKWSTEDSENTLSNINLRIKHGSLTAIVGTVGSGKSSLI------------SAILGEM-VKKSGKVRIKGQIAYVPQESWMQNTSLKNNILFGKPYDE---EWYNQVLEYCCLTYDLSLLPAGDETEIGERGINLSGGQRQRISLARAIYSDADVYIFDNPLSALDSQVGKSVFNNVLNNNTGIIKDKTRLLVTHGISYLPHVHHIAVMLKGE 756          

HSP 3 Score: 61.2326 bits (147), Expect = 1.304e-9
Identity = 30/72 (41.67%), Postives = 49/72 (68.06%), Query Frame = 0

Query:  963 AVAQGGQLMMLDEATSSVDSITEDLIQKAMQRLFKEKTVIAIAHRLSTVRHSDTILVLEKGEIVEQGSHQPL 1034
            A+ +  ++++LDEAT++VD  T++ IQ+ ++  F   T++ IAHRL T+   D ILVL+KG ++E GS   L
Sbjct: 1309 ALLRSCKILILDEATAAVDWETDEKIQETIRCYFPSCTILTIAHRLKTIIDYDKILVLDKGTVIEFGSPNEL 1380          

HSP 4 Score: 54.299 bits (129), Expect = 2.042e-7
Identity = 35/113 (30.97%), Postives = 63/113 (55.75%), Query Frame = 0

Query:  852 QIASIQSSFAAFDHIEELFVEPTEEEGR-NLLPSNKVEQQLKNFVSLEFKNVSFRYKDDSPYVLKSVSFMLEKGHQIALVGSTGSGKSTILRLISKTYQDYEGSILLNGIELA 963
            Q + I+++  A + ++E      E+E R +   S     Q K    +EFKN S RYK +S  VLK ++F +  G ++ +VG TG+GKS++   + +  +   G IL++G +++
Sbjct: 1117 QTSEIETNIVAVERLKEYAGLDIEKEWRLHKDTSYNWPSQGK----VEFKNYSLRYKANSDLVLKKINFTIFGGERVGIVGRTGAGKSSLSVALFRIVEAANGQILIDGKDIS 1225          

BLAST of abc transporter permease vs. L. salmonis genes
Match: EMLSAG00000010048 (supercontig:LSalAtl2s:LSalAtl2s662:116216:125875:1 gene:EMLSAG00000010048 transcript:EMLSAT00000010048 description:"snap_masked-LSalAtl2s662-processed-gene-1.13")

HSP 1 Score: 117.857 bits (294), Expect = 3.778e-27
Identity = 62/214 (28.97%), Postives = 120/214 (56.07%), Query Frame = 0

Query:  407 SIRNLSFRYSGEERT-ILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEG 619
            + +N+ F Y       +L  +SF+   GK + ++G  G GK+T++  +    D     V +   D+T+     LR ++  V Q+P LF  ++++NI  G    E+++  +D+  + +   + + R      T+VGEKG +LSGGQKQR++IARAL++   ++++D   SA+D ++E  +   L    + ++ ++V+HR++ +   D I+V+ +G
Sbjct:  246 TFKNVHFEYPSRPTVKVLSGLSFEASPGKTLALVGPSGCGKSTVIQLIQRFYDPSFGVVSIDGEDITTLDPHWLRSHIGIVGQEPVLFEYSIKENITMGLQG-EISEKMIDDTCKAANAYDFIQRLPKKYDTIVGEKGALLSGGQKQRIAIARALIRNPSILLLDEASSALDSQSEFIVQSALDKARKGRTTIIVAHRLSTIRSADAILVMKDG 458          

HSP 2 Score: 69.3218 bits (168), Expect = 4.405e-12
Identity = 37/102 (36.27%), Postives = 66/102 (64.71%), Query Frame = 0

Query:  952 EGSILLNG------IELAVAQGGQLMMLDEATSSVDSITEDLIQKAMQRLFKEKTVIAIAHRLSTVRHSDTILVLEKGEIVEQGSHQPLVAHN-GIYAGLLK 1046
            +G++L  G      I  A+ +   +++LDEA+S++DS +E ++Q A+ +  K +T I +AHRLST+R +D ILV++ G  V+ G+H+ L ++  G+Y  L+ 
Sbjct:  381 KGALLSGGQKQRIAIARALIRNPSILLLDEASSALDSQSEFIVQSALDKARKGRTTIIVAHRLSTIRSADAILVMKDGYRVDYGTHESLKSNKTGLYCSLVN 482          

BLAST of abc transporter permease vs. L. salmonis genes
Match: EMLSAG00000011700 (supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 gene:EMLSAG00000011700 transcript:EMLSAT00000011700 description:"maker-LSalAtl2s812-augustus-gene-0.6")

HSP 1 Score: 117.472 bits (293), Expect = 9.439e-27
Identity = 129/488 (26.43%), Postives = 230/488 (47.13%), Query Frame = 0

Query:  159 LKSTLLQKLNRLPNSFHERFASGRLISIINNDLGGIR-----LLFG--VGFLQFFNALLALSLT-PLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKALHLEHMKRLQNLS-----AQLMSYLSGIDLIKSQQMSPWAKSETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYM---------LMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILN--AKVP-ELDEDKLTELDVKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIR-FG-SSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEG 619
            L  TL Q + + P SF +    GR+++    D+  +       +FG   G   +   +  +S+  P++   I P L ++ +      FVI  V     + L     KRL +++     +     LSGI+ +++  +     SE E+          ++   Q    PV+  A+  + I I  +G ++         L R  +T G++   ++ S+ +   L  + R+ +  +  +V ++ ++   N  ++ P EL+ED L       LKG+  +I+NLS +Y  +   +L +I+  I  G KIG++G  GSGK+TL   L   L+V    + +   D+       LR  +  + QDP LFS T+  N+  FG   D EL +S     L+      D  + E G   ++ E G  +S GQ+Q + +ARALL+   ++IMD   +AVD ET++ I + +     + +VL ++HR+  +    +IIV++ G
Sbjct: 1505 LHGTLFQCIIKTPMSFFDTTPLGRILNRFGQDIEVLDTKMSFCIFGSMTGTFAYIATVTIISINVPIF---IIPTLAIFVVY-----FVILIVSLSSSRQL-----KRLSSVATSPIYSHFGETLSGINTVRAYSLEKAFYSEFER----------RLDEYQKRNFPVI-MADRWLGIRINLIGNFIIFASALFSVLSRDTITPGQLGLNVSSSLAITSILSWVIRMYSDLENNIVAVERIKEYSNKESEAPWELEED-LKLNSSWPLKGE-ITIKNLSLKYRKDLDWVLRDINVHISPGDKIGIVGRTGSGKSTLALALFRLLEVNSGQITIDGVDIKKMGLHTLRSKLTIIPQDPTLFSGTLRLNLDPFGLFKDMELIESLKHAYLQ------DFLK-EDGLDKVIAENGENISLGQRQLICLARALLRKNKVLIMDEATAAVDSETDKLIQKAIKDNFRDSTVLTIAHRLQTVLDYSKIIVIDSG 1959          

HSP 2 Score: 114.005 bits (284), Expect = 1.156e-25
Identity = 129/523 (24.67%), Postives = 245/523 (46.85%), Query Frame = 0

Query:  129 IVVGMSVAMVVVRILSRI-----------YALNPGRITEAALKSTLLQKLNRLPNSFHERFASGRLISIINNDLGGIRLLFGV------GFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKALHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWAKSETEKLNQLLLECRLKITRI--QVFFMPVLDYANDLMKIIILGLGGYMLMRQE---LTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELDVKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRS--DLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILE---GLFTRLENQSVLVVSHRVNALEYMDEIIVLNEGKFAKK 624
            I +G  +A+ V+   ++I           Y +  G   + ++ S + +K  R+ +S  +   SG ++++++ D+  I  L  +      G LQ   A+  L  T  Y   ++  L ++ +IPI+  F+  R     MK   ++ MK+      ++   L GI +IK   +  W  S ++ ++ +  E  +K+ ++  + F   +L  ++    I +     Y++   E   L   +I   ++   +L  PL  L  +        V ++ +   L ++  EL+E  L   +    +       +        E ++  +IS D+  G  I ++G +GSGK++L++ L            LG+   TS   +  ++   V    Q+ ++ + +V+DNI FG    +  K+  DEVL+   L +D+  F  GD T +GEKGI LSGGQKQR+S+ARA+   +D+  +D+ L+ VD    + + E   G    L  ++ ++V+H ++ L  +DEI  L +G+  +K
Sbjct:  863 IPLGQGIALSVILFGNKILGTFFIARYFFYMVTVGMKLKTSITSLIYRKALRI-HSTRDDTTSGEIVNLMSVDVQKIVDLMPLLNTIWSGPLQIIAAIYLLINTLGYS-ALAGVLVMFLLIPIN-GFIAVR-----MKNAQMKQMKKKDERVKKMNEILQGIKIIK---LYAWESSFSKLISSIRFE-EIKLLKLSSKYFGFMMLTISSTTFFISLFTFIVYVVSDPENHILDSEKIFVSISLFNILRFPLNMLTHVIGGIASASVSLKRINKFLASE--ELEEGILVRSNSHDHQAICIHPSSSFSWKGSSE-SLFKDISMDVNRGNLIAIIGPVGSGKSSLISAL------------LGEMLFTSKGTNPVEIHGSVAYTPQNAWMQNVSVKDNILFGR---KFNKNWYDEVLKACSLESDMEXFPSGDSTEIGEKGINLSGGQKQRISLARAVYSQSDIYFLDDPLAXVDSHVAKHLFEEVIGSNGLLRGKTRILVTHNLSFLHLVDEIYFLKDGEITEK 1355          

HSP 3 Score: 63.5438 bits (153), Expect = 3.291e-10
Identity = 31/74 (41.89%), Postives = 53/74 (71.62%), Query Frame = 0

Query:  963 AVAQGGQLMMLDEATSSVDSITEDLIQKAMQRLFKEKTVIAIAHRLSTVRHSDTILVLEKGEIVEQGSHQPLVA 1036
            A+ +  +++++DEAT++VDS T+ LIQKA++  F++ TV+ IAHRL TV     I+V++ G I+E  S + L++
Sbjct: 1899 ALLRKNKVLIMDEATAAVDSETDKLIQKAIKDNFRDSTVLTIAHRLQTVLDYSKIIVIDSGCIIEYDSPKNLLS 1972          

BLAST of abc transporter permease vs. L. salmonis genes
Match: EMLSAG00000000752 (supercontig:LSalAtl2s:LSalAtl2s111:55855:93761:1 gene:EMLSAG00000000752 transcript:EMLSAT00000000752 description:"maker-LSalAtl2s111-augustus-gene-1.10")

HSP 1 Score: 109.768 bits (273), Expect = 2.266e-24
Identity = 64/196 (32.65%), Postives = 111/196 (56.63%), Query Frame = 0

Query:  423 LDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTR-LENQSVLVVSHRVNALEYMDEIIVLN 617
            L NISF +  G+   ++G +G GK+T++  L            LG+  V S+   +++  +   +Q+ ++FS +V  NI  G     L   +  EV+ +  L +DV  +  GD T VGEKGI LSGGQK R+++AR +    D+ I+D+ LSAVD    +++ +    + L +++V++V+H++  L+  + II+LN
Sbjct:  734 LKNISFSVEIGELCAIIGPVGCGKSTIIQSL------------LGEFPV-SYGEINIKGRISYASQEAWIFSGSVRQNILMGKP---LIDKRYREVIRVCALEHDVREWPDGDYTFVGEKGISLSGGQKSRINLARCVYASADIYILDDPLSAVDPHVGQQLFDTCIQKFLSDKTVILVTHQLQFLKNANNIILLN 913          

HSP 2 Score: 92.4337 bits (228), Expect = 4.541e-19
Identity = 62/206 (30.10%), Postives = 106/206 (51.46%), Query Frame = 0

Query:  387 ELDEDKLTELDVK---SLKGK-TFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGL 588
            EL ++K  E D+K   S   K      N+S RYS  +  +L  ++F   + +KIG++G  G+GK+++++ L   L  PE  +F+   D+      D+R+ +  + QDP LF+ ++  N+       E    Q+   LE ++L + V    HG  ++V E G   S GQ+Q   +A A+L+   ++IMD   + VD  T+  I E +
Sbjct:   27 ELPKEKGLESDIKLDPSWPDKGVVEFSNVSMRYSQHQPNVLKGLNFKTNSFEKIGIIGRTGAGKSSIISAL-FRLAEPEGEIFIDGLDICKVGLLDIRKKISIIPQDPILFNGSIRKNL---DPFNEFTDVQIWNALEQAKLYDIVVDLGHGLDSVVLEFGSNFSVGQRQLFCLAXAILRRNKVLIMDEATANVDPFTDSLIQEAI 228          

HSP 3 Score: 87.0409 bits (214), Expect = 1.943e-17
Identity = 89/377 (23.61%), Postives = 166/377 (44.03%), Query Frame = 0

Query:  256 MKRLQNLS-----AQLMSYLSGIDLIKSQQMSPWAKSETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILG--LGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLG-RIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELDVK---SLKGK-TFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEGK 620
            +KRL+ ++     +QL S L G+  I+S ++      E + L  +          +  FF     +  DLM  +     +  ++   ++ T G++   LT S+ L   ++Q G R +   +  M  ++ V     A+  +L ++K  + D+K   S   K      N++ +Y G    +L  ++                                PE  +F+   ++   S  D+R+ +  + QDP LF  T+  N+       ELA   +   LE ++L+  V+  E G +T V E G   S GQ+Q   +ARA+L+   ++IMD   + VD  T+  I E + T  ++ +V  ++HR+  +   D I+V+++G+
Sbjct: 1222 VKRLEGITRSPVFSQLASSLDGLTTIRSMKIEEMLIEEFDYLQDIHTSSYYSFLVVNRFFA----FCGDLMLSLFTASMVSMFLFYNRDATGGDVGLSLTLSLALC-GMIQWGLRQSAEVENFMTSVERV-----AEYGDLPKEKGLKGDIKLDPSWPDKGVIEFSNVNLKYDGTTPYVLKGLT-------------------------------EPEGKIFIDGVNICRLSLQDVRKKISIIPQDPLLFKGTIRKNLDPFDEYGELA---IWHALEQAKLSVAVSELEGGLETEVSEGGNNFSVGQRQLFCLARAILRKNKVLIMDEATANVDPMTDSLIQEAIRTEFKDCTVFTIAHRLYTVMDSDRILVMSDGE 1554          

HSP 4 Score: 69.3218 bits (168), Expect = 5.646e-12
Identity = 59/196 (30.10%), Postives = 92/196 (46.94%), Query Frame = 0

Query:  897 LEFKNVSFRYKDDSPYVLKSVSFMLEKGHQIALVGSTGSGKS--TILRLISKTYQD---YEGSILLN------------------------------GIELAVAQGG---------------------QLMMLDEATSSVDSITEDLIQKAMQRLFKEKTVIAIAHRLSTVRHSDTILVLEKGEIVEQGSHQPLVA 1036
            +EF NV+ +Y   +PYVLK ++   E   +I + G      S   + + IS   QD   ++G+I  N                              G+E  V++GG                     +++++DEAT++VD +T+ LIQ+A++  FK+ TV  IAHRL TV  SD ILV+  GEI E G+   L++
Sbjct: 1374 IEFSNVNLKYDGTTPYVLKGLT---EPEGKIFIDGVNICRLSLQDVRKKISIIPQDPLLFKGTIRKNLDPFDEYGELAIWHALEQAKLSVAVSELEGGLETEVSEGGNNFSVGQRQLFCLARAILRKNKVLIMDEATANVDPMTDSLIQEAIRTEFKDCTVFTIAHRLYTVMDSDRILVMSDGEIKELGAPLDLLS 1566          

BLAST of abc transporter permease vs. L. salmonis genes
Match: EMLSAG00000000741 (supercontig:LSalAtl2s:LSalAtl2s111:116041:261433:1 gene:EMLSAG00000000741 transcript:EMLSAT00000000741 description:"maker-LSalAtl2s111-snap-gene-2.14")

HSP 1 Score: 108.227 bits (269), Expect = 6.043e-24
Identity = 71/235 (30.21%), Postives = 127/235 (54.04%), Query Frame = 0

Query:  386 PELDEDKLTELDVKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKT--VTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTR-LENQSVLVVSHRVNALEYMDEIIVLN 617
            PE+  ++   +++K++ GK           S E+   L N+SF +   +   ++G +GSGK+T++  L            LG+  V+S    D+  Y K    +Q+P++FS T+  NI  G+    +   +  +VL++  L +D+  +   D T VGEKG+ LSGGQK R+++AR++    D+ ++D+ LSAVD    R + E    + L  ++V++V+H++  L   + II+LN
Sbjct: 1191 PEVRPEESLRIEMKNVSGKW---------TSNEKDDDLRNVSFQVHKRELTAIIGPVGSGKSTILQAL------------LGEFPVSS---GDISIYGKISYASQEPWIFSGTIRQNILLGAP---MNHKRYLKVLKVCSLDHDLESWPDRDHTFVGEKGVALSGGQKARINLARSVYSEGDVYLLDDPLSAVDSHVGRYLYEECIKKYLSRKTVILVTHQIQYLREANNIILLN 1398          

HSP 2 Score: 107.457 bits (267), Expect = 1.005e-23
Identity = 68/214 (31.78%), Postives = 120/214 (56.07%), Query Frame = 0

Query:  408 IRNLSFRYSGEERTI-LDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKT--VTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTR-LENQSVLVVSHRVNALEYMDEIIVLN 617
            ++N+S +++  E+   L N+SF +   +   ++G +GSGK+T++  L            LG+  V+S    D+  Y K    +Q+P++FS T+  NI  G+S   +   +  +VL++  L +D+  +   D T VGEKG+ LSGGQK R+++AR++    D+ ++D+ LSAVD    R + E      L  ++V++V+H++  L     II+LN
Sbjct:  424 MKNVSGKWTSNEKDDDLRNVSFQVHKRELTAIIGPVGSGKSTILQAL------------LGEFPVSS---GDISIYGKISYASQEPWIFSGTIRQNILLGAS---MNHKRYLKVLKVCSLEHDLESWPDRDHTFVGEKGVALSGGQKARINLARSVYSEADVYLLDDPLSAVDSHVGRHLYEECIKNYLSRKTVILVTHQIQYLGDASNIILLN 619          

HSP 3 Score: 53.5286 bits (127), Expect = 3.018e-7
Identity = 78/320 (24.38%), Postives = 137/320 (42.81%), Query Frame = 0

Query:  736 TIGETFIQSVVGLVKDSINTIALLVMMFFIDWQLTLIVLVIMPPVMYLTVYVRNRLRALYKVTRSTLARG-ITSITIAIMIWYGSEQVIEGALTLGVLIAFINTLEKVFVPIR---DFTSQIASIQSSFAAFDHIEELFVEPTEEEGRNLLPSNKVEQQLKNFVSL--EFKNVSFRY----KDDSPYVLKSVSFMLEKGHQIALVGSTGSGKSTILRLISKTYQDYEGSILLNGIELAVAQGGQLMMLDEATSSVDSITEDLIQKA---MQRLFKEKTVIAIAHRLSTVRHSDTILVLEKGEIVEQGSHQPLVAHNGIYA 1042
            +IG++ +  +V L+ + +N   L V+     W         + P+ ++ V     + A Y V  S++  G I  + I + IW G +      L  G     I  + ++   I     F + I+    +  + D I+   +   EE G ++  S K E +++   SL  E KNVS ++    KDD    L++VSF + K    A++G  GSGKSTIL+ +   +    G I + G    ++   Q   +   T     I ++++  A    +R  K   V ++ H L +    D   V EKG  +  G    +     +Y+
Sbjct: 1050 SIGKSSVGQMVNLLSNDVNRYDLCVLFLHYLW---------VAPLQFILV----SMIAWYMVGISSMCGGAILLVFIPLQIWIGKQLSRLRILIAGKTDKRIRVMNEIIEGISLTLFFPNTISMTSEALVSTDRIQNFLL--LEEIG-DICSSMKHEPEVRPEESLRIEMKNVSGKWTSNEKDDD---LRNVSFQVHKRELTAIIGPVGSGKSTILQALLGEFPVSSGDISIYG---KISYASQEPWIFSGT-----IRQNILLGAPMNHKRYLKVLKVCSLDHDLESWPDRDHTFVGEKGVALSGGQKARINLARSVYS 1342          

BLAST of abc transporter permease vs. L. salmonis genes
Match: EMLSAG00000002016 (supercontig:LSalAtl2s:LSalAtl2s1361:43077:48755:-1 gene:EMLSAG00000002016 transcript:EMLSAT00000002016 description:"augustus_masked-LSalAtl2s1361-processed-gene-0.2")

HSP 1 Score: 107.071 bits (266), Expect = 1.575e-23
Identity = 76/275 (27.64%), Postives = 125/275 (45.45%), Query Frame = 0

Query:  362 RIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELD--------------VKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKIL-EGLFTRL--ENQSVLVVSHRVNALEYMDEIIVLNEG 619
            R+A    R  V I      LN      D+ K  + +               K L    F++ N +F +   E  +L +I+ +I  G    V+G  GSGKT L++ L   +D            +T   + ++   V  + Q P+L + T++DNI  G    E    +  +V+    L  D+    HGD T +GE+G++LSGGQ+QRL+IAR L   +    MD   S++D +    +  EG+   L    ++V + + R++ L   D I+ L +G
Sbjct:  670 RLAEFLNRAEVSIYKQNNKLNKHCTYFDDRKDDDEEEEEEEEESEIFIQRAKRLPETCFTVENGTFAWPKCETNVLQSINLEIKTGSLTIVIGPSGSGKTALISSLIEEMD-----------RITGSVKWNVPDTVALLGQRPWLLNTTIKDNILLGRPFKE---KRYKKVIAACDLQTDIDLLPHGDDTEIGERGVLLSGGQRQRLAIARCLYSKSYCTFMDAPFSSLDSKITSHVFEEGVLKILLKRRRTVFLTTERLDFLHRADHIVALKDG 930          

HSP 2 Score: 97.0561 bits (240), Expect = 1.766e-20
Identity = 62/220 (28.18%), Postives = 111/220 (50.45%), Query Frame = 0

Query:  422 ILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEGKFAKKYKGSAILGIAMLPFSVI 641
            I    S +IP  +K+G+ G  GSGK+TL+  +     V + S+ +   ++ +   S LR++V T+ QD  LFS T+  N+     + + +   +   L+ +     V  F  G  T V E G   S GQ+Q L+I +ALL+   ++I+D   SA+D   E  +   L    E+ +++ V+HR++ +   + ++V+ EG+  +      +L   M  FS +
Sbjct: 1666 IQQGFSLEIPYRQKVGICGRSGSGKSTLLMGIVRLSRVLQGSITINGININAIPLSRLRKFVITIPQDAVLFSGTIRSNL---DPENDFSDELIWSTLDKADCGKTVRNFPDGLDTCVTENGDNFSLGQRQELNIVKALLRRPRVVILDESTSALDPNREVALHNTLLEAFEDSTLISVAHRLSNIVEYERVLVMGEGRILEDGNPKELLKKPMGFFSAL 1882          

BLAST of abc transporter permease vs. SwissProt
Match: gi|6016539|sp|P77265.1|MDLA_ECOLI (RecName: Full=Multidrug resistance-like ATP-binding protein MdlA)

HSP 1 Score: 231.106 bits (588), Expect = 5.732e-64
Identity = 168/573 (29.32%), Postives = 299/573 (52.18%), Query Frame = 0

Query:   73 IAHYLRMNRTSYLLAVVFIFLVNWLQVEIPRYIQLAIDLIYDASSSGHQQLQTYVWIVVGMSVAMVV--VRILSRIYALNPGRITEAALKSTLLQKLNRLPNSFHERFASGRLISIINNDLGGIRLLFGVGFLQFFNAL-LALSLTPLYMWRISPELTLYSIIPISI-AFVIFRVGFKRMKALHLEHMKRLQ----NLSAQLMSYLSGIDLIKS-----QQMSPWAKS--ETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDE------DKLTELDVKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEGKFAKK 624
            ++ Y R     YL AV  + ++  LQ+  P+ + + +D + +   +  Q L   +WI   + +A+VV  +R + R+            L+    ++L+R    F+ R  +G L++   ND+  +    G G L   ++L +  ++  +   +IS +LTL+S++P+ + A +I R G     ALH E  K  Q    +L+ +    L+ I +IK+     +Q + +A    +T K N       +++ RI   F P +  A  +  ++ +G G +M+++  LTLG++T+F+ Y  L+  P++ L  +  I +RG      ++ +L A+ P +++      +   ELDV   +          F Y   +   L+N++F +  G+ +G+ G  GSGK+TL++ +  H DV E  +   D  +T       R  +  V+Q P+LFS TV +NI  G  +    + +++ V  L+ + +D+ R   G  T VGE+G+MLSGGQKQR+SIARALL   +++I+D+ LSAVD  TE +IL  L    + ++V++ +HR++AL    EIIV+  G  A++
Sbjct:    7 LSWYFRREWRRYLGAVALLVIIAMLQLVPPKVVGIVVDGVTEQHFTTGQIL---MWIATMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDYYRQLSRQHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIMMSTQISWQLTLFSLLPMPVMAIMIKRNG----DALH-ERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKN-------MRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVQGSLTLGQLTSFMMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAML-AEAPVVNDGSEPVPEGRGELDVNIHQ----------FTYPQTDHPALENVNFALKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGCPNA--TQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLVNAEILILDDALSAVDGRTEHQILHNLRQWGQGRTVIISAHRLSALTEASEIIVMQHGHIAQR 551          

HSP 2 Score: 80.1073 bits (196), Expect = 4.309e-14
Identity = 106/474 (22.36%), Postives = 191/474 (40.30%), Query Frame = 0

Query:  623 KKYKGSAILGIAMLPFSVITSLLFPWLIIQVIDVHLSQGDMDGLLEYVFYMVIVLVVSYVVDTIYSYNLRKTGQYTITDMRSVLFARVLKLPRSYFDNTPIGVTLSRLTSDLETIGETFIQSVVGLVKDSINTIALLVMMFF-IDWQLTLIVLVIMPPVMYLTVYVRNRLRALYKVTRSTL------------------------------------------------ARGITSITIAI------MIWYGSEQVIEGALTLGVLIAFINTLEKVFVPIRDFTSQIASIQSSFAAFDHIEELFVE-PTEEEGRNLLPSNKVEQQLKNFVSLEFKNVSFRYKDDSPYVLKSVSFMLEKGHQIALVGSTGSGKSTILRLISKTYQDYEGSILLNGIELAVAQGGQLMMLDEATSSVDSITE------DLIQKAMQRLFKEKTVIAIAH--RLSTVRHSDTILVLEKG---EIVEQG 1029
            ++Y G+  L + +    ++   +   ++  V + H + G    +L ++  MV++ VV Y++  ++   L         ++R   + ++ +    ++     G  ++R T+D++ +     + V+ LV   +   A+L+MM   I WQLTL  L+ MP +  +     + L   +K+ ++                                                  AR   +I IAI       I  GS  V++G+LTLG L +F+  L  +  P+         ++   AA+  I  +  E P   +G   +P  + E        L+     F Y       L++V+F L+ G  + + G TGSGKST+L LI + +   EG I  + I L   Q      LD   S +  +++      D +   +       T   I H  RL++V   D IL L +G   E+ E+G
Sbjct:   16 RRYLGAVALLVIIAMLQLVPPKVVGIVVDGVTEQHFTTGQ---ILMWIATMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDYYRQLSRQHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIMMSTQISWQLTLFSLLPMPVMAIMIKRNGDALHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVQGSLTLGQLTSFMMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVNDGSEPVPEGRGE--------LDVNIHQFTYPQTDHPALENVNFALKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQ------LDSWRSRLAVVSQTPFLFSDTVANNIALGCPNATQQEIEHVARLASVH--DDILRLPQGYDTEVGERG 470          

BLAST of abc transporter permease vs. SwissProt
Match: gi|226693608|sp|O31707.3|YKNU_BACSU (RecName: Full=Uncharacterized ABC transporter ATP-binding protein YknU)

HSP 1 Score: 224.557 bits (571), Expect = 9.727e-62
Identity = 151/563 (26.82%), Postives = 289/563 (51.33%), Query Frame = 0

Query:   68 EDYEFIAHYLRMNRTSYLLAVVFIFLVNWLQVEIPRYIQLAIDLIYDASSSGHQQLQTYVWIVVGMSVAMVVVRILSRIYALNPGRI----TEAALKSTLLQKLNRLPNSFHERFASGRLISIINNDLGGIRLLFGVGFLQF--FNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKALHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWAKSETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELDVKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEGKFAKK 624
            E ++ +  Y    R  ++ +++ + L+  + V  P  +Q+ ID I        +Q Q   W+ +G  +A++V++ ++  +    G +    +   L++ L +KL RL  S+++   +G L+S +  D+ G+R     G  +   F  L+A+SL+ ++ + +   L   +++P  +A  ++R   KR+        K    L+ ++   +SGI+ +KS     +  S   K N       L+ + I   + P++++  +   + +L  GGY++M+ +L  GE+ AF +    +  P+M LG +  ++ +     + +  IL  +  E   D    L  + L G     +N+S  Y  E+   L N+SF+  +GK IG+LG  GSGK+++   L          + +  + +T +S   LR  +  V Q+ +LFS+T+  NI +G  D  +    V E  + +Q  N +     G  T++GE+G+ LSGGQKQR++IARA+     ++I+D+  SAVD +TE  I   L   ++N++  +V+HR+++L++ DEI+V N+G+  ++
Sbjct:    2 ETFKRLKMYYWPYRKVFMWSLLAMLLMTAITVVYPIILQITIDEIVLG-----RQYQLAAWVSLGF-IAVMVLKGMATFFHQYLGDMFGIKSVYRLRNGLYEKLQRLSFSYYDNAKTGDLMSRLTADVEGLRFFLSYGLAELIRFGLLVAISLSVMFYYSVPLTLVTIAVLPF-LAVAVYRFD-KRVHPAFRGIRKSFAKLNTKVQENISGINTVKSLSREDFQISTFNKANAEYRAQYLQTSSIWSAYFPLMEFIGNTCIVALLSYGGYLVMQNQLNPGELVAFFSLVNYMMWPIMNLGFVINMFSQAKASGERLLDILEKE--EDITDHPHALHKQKLTGDV-HFKNVSLAYGKEQTNALCNVSFEANSGKVIGLLGPTGSGKSSVTQLLTRFYSPVGGMITIDHKPITDYSLKTLRSNIGVVLQESFLFSSTIRSNISYGRPDASM--EDVIEAAKRAQAHNFIMELPDGYDTMLGERGMGLSGGQKQRIAIARAICLNPSILILDDATSAVDMQTEHSIQLALKEVMKNRTTFIVAHRISSLKHADEILVFNKGRIRER 551          

HSP 2 Score: 75.485 bits (184), Expect = 1.043e-12
Identity = 84/381 (22.05%), Postives = 160/381 (41.99%), Query Frame = 0

Query:  633 IAMLPFSVITSLLFPWLIIQVIDVHLSQGDMDGLLEYV-FYMVIVLVVSYVVDTIYSYNLRKTGQYTITDMRSVLFARVLKLPRSYFDNTPIGVTLSRLTSDLETIGETFIQSVVGLVKDSINTIALLVMMFFIDWQLTLIVLVIMPPVMYLTVYVRNRLRALYKVTRSTLAR----------GITSI--------------------------------------------TIAIMIWYGSEQVIEGALTLGVLIAFINTLEKVFVPIRDFTSQIASIQSSFAAFDHIEELFVEPTEEEGRNLLPSNKVEQQLKNFVSLEFKNVSFRYKDDSPYVLKSVSFMLEKGHQIALVGSTGSGKSTILRLISKTYQDYEGSILLN 958
            +AML  + IT +++P +I+Q+    +  G    L  +V    + V+V+  +    + Y     G  ++  +R+ L+ ++ +L  SY+DN   G  +SRLT+D+E +       +  L++  +     L +MF+    LTL+ + ++P +         R+   ++  R + A+          GI ++                                             I  ++ YG   V++  L  G L+AF + +  +  PI +    I     + A+ + + ++     +EE     P    +Q+L     + FKNVS  Y  +    L +VSF    G  I L+G TGSGKS++ +L+++ Y    G I ++
Sbjct:   23 LAMLLMTAIT-VVYP-IILQITIDEIVLGRQYQLAAWVSLGFIAVMVLKGMATFFHQYLGDMFGIKSVYRLRNGLYEKLQRLSFSYYDNAKTGDLMSRLTADVEGLRFFLSYGLAELIRFGLLVAISLSVMFYYSVPLTLVTIAVLPFLAVAVYRFDKRVHPAFRGIRKSFAKLNTKVQENISGINTVKSLSREDFQISTFNKANAEYRAQYLQTSSIWSAYFPLMEFIGNTCIVALLSYGGYLVMQNQLNPGELVAFFSLVNYMMWPIMNLGFVINMFSQAKASGERLLDIL---EKEEDITDHPHALHKQKLTG--DVHFKNVSLAYGKEQTNALCNVSFEANSGKVIGLLGPTGSGKSSVTQLLTRFYSPVGGMITID 396          

HSP 3 Score: 73.9442 bits (180), Expect = 3.742e-12
Identity = 34/83 (40.96%), Postives = 53/83 (63.86%), Query Frame = 0

Query:  959 GIELAVAQGGQLMMLDEATSSVDSITEDLIQKAMQRLFKEKTVIAIAHRLSTVRHSDTILVLEKGEIVEQGSHQPLVAHNGIY 1041
             I  A+     +++LD+ATS+VD  TE  IQ A++ + K +T   +AHR+S+++H+D ILV  KG I E+G+H  L+   G Y
Sbjct:  482 AIARAICLNPSILILDDATSAVDMQTEHSIQLALKEVMKNRTTFIVAHRISSLKHADEILVFNKGRIRERGTHHELLEKGGYY 564          

BLAST of abc transporter permease vs. SwissProt
Match: gi|81815002|sp|O07550.1|YHEI_BACSU (RecName: Full=Probable multidrug resistance ABC transporter ATP-binding/permease protein YheI)

HSP 1 Score: 216.083 bits (549), Expect = 9.358e-59
Identity = 152/557 (27.29%), Postives = 281/557 (50.45%), Query Frame = 0

Query:   72 FIAHYLRMNRTSYLLAVVFIFLVNWLQVEIPRYIQLAIDLIYDASSSGHQQLQTYVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLPNSFHERFASGRLISIINNDLGGIRLLFGVGFLQFFNALLALSLTPLYM-WRISPELTLYSIIPISIAFVIFRVGFKRMKALHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWAKSETEKLNQL---LLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELDVKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEGKFAKK 624
            F A++LR     Y +A+V +  VN +++  P+ +  AID +  A +   + L  Y+ I   ++ A+ ++             + E  L++ L+  L  +   F+E+  +G L++   NDL  + L  G G L   ++ + +    L M + IS +LT  +IIP+ +  +   +   ++     E       L+ +++  +SG+ +I++        ++  + N++   + +  +K+  I   F P +        +I LG G +++ R ELTLGE+ +F  Y  ++  P+  +G +  + QRG   +  V   L+ +    D  +    D+K      FS  ++SF Y       L +ISF +  G+ +G+ G  GSGKTT++  L       E S+      +       LR ++  V QD  LFS TV++NI +G  D      +V + +  +    D+     G +T+VGEKG+ LSGGQKQR+SIARAL+   +++I+D+ LSAVD +TE  I++ +    + ++  +++HR++A+E+ D I+V++ G  A++
Sbjct:   12 FKAYWLR-----YTIAIVLLLAVNVIEMFPPKLLGNAIDDM-KAGAFTAEGLLFYIGIFFVLTAAVYIMSYFWMHQLFGGANLMEKILRTKLMGHLLTMSPPFYEKNRTGDLMARGTNDLQAVSLTTGFGILTLVDSTMFMMTIFLTMGFLISWKLTFAAIIPLPVMAIAISLYGSKIHERFTEAQNAFGALNDRVLESVSGVRVIRAYVQE---TNDVRRFNEMTADVYQKNMKVAFIDSLFEPTVKLLVGASYLIGLGYGAFLVFRNELTLGELVSFNVYLGMMIWPMFAIGELINVMQRGNASLDRVNETLSYETDVTDPKQ--PADLKEPGDIVFS--HVSFTYPSSTSDNLQDISFTVRKGQTVGIAGKTGSGKTTIIKQLLRQYPPGEGSITFSGVPIQQIPLDRLRGWIGYVPQDHLLFSRTVKENILYGKQDA--TDKEVQQAIAEAHFEKDLHMLPSGLETMVGEKGVALSGGQKQRISIARALMANPEILILDDSLSAVDAKTEAAIIKNIRENRKGKTTFILTHRLSAVEHADLILVMDGGVIAER 553          

HSP 2 Score: 69.707 bits (169), Expect = 7.843e-11
Identity = 35/82 (42.68%), Postives = 54/82 (65.85%), Query Frame = 0

Query:  960 IELAVAQGGQLMMLDEATSSVDSITEDLIQKAMQRLFKEKTVIAIAHRLSTVRHSDTILVLEKGEIVEQGSHQPLVAHNGIY 1041
            I  A+    ++++LD++ S+VD+ TE  I K ++   K KT   + HRLS V H+D ILV++ G I E+G+HQ L+A+NG Y
Sbjct:  485 IARALMANPEILILDDSLSAVDAKTEAAIIKNIRENRKGKTTFILTHRLSAVEHADLILVMDGGVIAERGTHQELLANNGWY 566          

HSP 3 Score: 67.0106 bits (162), Expect = 4.699e-10
Identity = 45/150 (30.00%), Postives = 72/150 (48.00%), Query Frame = 0

Query:  813 IMIWYGSEQVIEGALTLGVLIAFINTLEKVFVPIRDFTSQIASIQSSFAAFDHIEELFVEPTEEEGRNLLPSNKVEQQLKNFVSLEFKNVSFRYKDDSPYVLKSVSFMLEKGHQIALVGSTGSGKSTILRLISKTYQDYEGSILLNGIEL 962
            I + YG+  V    LTLG L++F   L  +  P+      I  +Q   A+ D + E     T+      +   K    LK    + F +VSF Y   +   L+ +SF + KG  + + G TGSGK+TI++ + + Y   EGSI  +G+ +
Sbjct:  259 IGLGYGAFLVFRNELTLGELVSFNVYLGMMIWPMFAIGELINVMQRGNASLDRVNETLSYETD------VTDPKQPADLKEPGDIVFSHVSFTYPSSTSDNLQDISFTVRKGQTVGIAGKTGSGKTTIIKQLLRQYPPGEGSITFSGVPI 402          

BLAST of abc transporter permease vs. SwissProt
Match: gi|7388395|sp|Q9WYC4.1|Y288_THEMA (RecName: Full=Uncharacterized ABC transporter ATP-binding protein TM_0288)

HSP 1 Score: 205.682 bits (522), Expect = 4.349e-55
Identity = 146/554 (26.35%), Postives = 285/554 (51.44%), Query Frame = 0

Query:   76 YLRMNRTSYLLAVVFIFLVNWLQVEIPRYIQLAIDLIYDASSSGHQQLQTYVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLPNSFHERFASGRLISIINNDLGGIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKALHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWAKSETEKLNQLLLECRLKITRIQVF---FMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELDVKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEGKFAKKYK 626
            YLR +  + ++  VF+ + + L V  P  I   ID+++         L  Y+ I+  +     ++  L     L   +     L+  L +KL R+P  F +R   G +IS + ND+  I  + G   +QFF+ ++ L+   + M+R++  L+L ++  + +  +I ++   + +    E+ + L  L+  +   +SG+ +IK   +    + E EK +++    R   T+ Q+F     P+++  N+L   +I G GG++ ++  +T+G I  F+ YS     PL +L     + Q  +   + +  IL+    E ++D    ++++ ++G+    +N+ F Y  +++ +L +I+F I  G+K+ ++G  GSGKTT+VN L    DV    + +   D+    RS LR  +  V QD  LFS TV++N+++G+        ++ E  +L+   + +     G +T++ + G  LS GQ+Q L+I RA L    ++I+D   S VD +TE+ I   ++  +E ++ ++++HR+N ++  D IIVL +G+  +  K
Sbjct:   31 YLRPHTFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRR--FDLLPRYMLILGTIYALTSLLFWLQGKIMLTLSQDVVFRLRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIK---LFTREEKEMEKFDRVNESLRKVGTKAQIFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDL---EEEKDDPDAVELREVRGE-IEFKNVWFSYD-KKKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGA--TDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGK 572          

HSP 2 Score: 106.686 bits (265), Expect = 1.658e-22
Identity = 89/396 (22.47%), Postives = 176/396 (44.44%), Query Frame = 0

Query:  621 FAKKYKGSAILGIAMLPFSVITSLLFPWLIIQVIDVHLSQGDMDGLLEYVFYMVIVLVVSYVVDTIYSYNLRKTGQYTITDMRSVLFARVLKLPRSYFDNTPIGVTLSRLTSDLETIGETFIQSVVGLVKDSINTIALLVMMFFIDWQLTLIVLVIMPPVMYLTVYVRNRLRALYKVTRSTLAR----------GITSITI--------------------------------------------AIMIWYGSEQVIEGALTLGVLIAFINTLEKVFVPIRDFTSQIASIQSSFAAFDHIEELFVEPTEEEGRNLLPSNKVEQQLKNFVSLEFKNVSFRYKDDSPYVLKSVSFMLEKGHQIALVGSTGSGKSTILRLISKTYQDYEGSILLNGIEL 962
            + + +  + I+    +  S I  +L P+LI + IDV       D L  Y+  +  +  ++ ++  +    +    Q  +  +R  LF ++ ++P  +FD TP G  +SR+ +D++ I      S++      +     ++MMF ++  L+L+ L I+P  + +T  V ++ R  +   +  L +          G+T I +                                            A++  +G    ++  +T+G +  FI    +   P+ + ++Q   IQ + A+ + I E+     E++  + +   +V  ++      EFKNV F Y    P VLK ++F ++ G ++ALVG TGSGK+TI+ L+ + Y    G IL++GI++
Sbjct:   31 YLRPHTFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRFDLLPRYMLILGTIYALTSLLFWLQGKIMLTLSQDVVFRLRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEKDDPDAVELREVRGEI------EFKNVWFSYDKKKP-VLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDI 419          

HSP 3 Score: 80.4925 bits (197), Expect = 3.050e-14
Identity = 42/90 (46.67%), Postives = 58/90 (64.44%), Query Frame = 0

Query:  952 EGSILLNGIELAVAQGGQLMMLDEATSSVDSITEDLIQKAMQRLFKEKTVIAIAHRLSTVRHSDTILVLEKGEIVEQGSHQPLVAHNGIY 1041
            +G   L  I  A     ++++LDEATS+VD+ TE  IQ AM +L + KT I IAHRL+T++++D I+VL  GEIVE G H  L+   G Y
Sbjct:  494 QGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELIQKRGFY 583          

BLAST of abc transporter permease vs. SwissProt
Match: gi|46396384|sp|Q87R16.1|MSBA_VIBPA (RecName: Full=Lipid A export ATP-binding/permease protein MsbA)

HSP 1 Score: 204.142 bits (518), Expect = 1.001e-54
Identity = 133/465 (28.60%), Postives = 245/465 (52.69%), Query Frame = 0

Query:  170 LPNSFHERFASGRLISIINNDLGGIRL---------------LFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKALHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWAKSETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELDVKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEG 619
            +P S+ ++  +G L+S I  D   +                 + G+  L F+N+           W++S  L L+++ P+ +A+ I  V  KR + +       + N++A     L G  ++ S       +   +K++  + +  +K+   Q    P++        + +L L     ++++LT G  T   +    L  PL  L  + + +QRGM   Q++  +++ + PE +E K T   V+  KG   S++++SF Y G E+  L+++SFDIP GK + ++G  GSGK+T+ N  N   DV   S+ L  RD+  +   +LR     V+Q+ +LF+ T+ +NI + + D +  +S ++   +L+     + + E+G  T++GE G  LSGGQ+QR++IARALL+   ++I+D   SA+D E+ER I   L    ++++VLV++HR++ +E  DEI+V+++G
Sbjct:  111 MPVSYFDKEKTGNLLSRITYDSEQVSAATSQALVSIVREGASIIGLLVLMFYNS-----------WQLS--LVLFAVAPV-VAWGIGVVS-KRFRKISKNMQTMMGNVTASAEQMLKGHKVVLSYGGQDIERQRFDKVSNQMRQQSMKLVTAQAAANPIIQMIASFAIVAVLYLASIDSIKEQLTPGTFTVVFSAMFGLMRPLKALTNVTSQFQRGMAASQTLFALIDLE-PEKNEGKYT---VERAKGDV-SVKDVSFTYVGSEKPALEHVSFDIPRGKTVALVGRSGSGKSTIANLFNRFYDVDSGSITLDGRDIRDYELKNLREQFALVSQNVHLFNDTIANNIAYATED-KYERSDIEHAAKLAHAMEFINKMENGLDTMIGENGASLSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKDKTVLVIAHRLSTIEKADEILVVDDG 554          

HSP 2 Score: 112.079 bits (279), Expect = 3.513e-24
Identity = 98/395 (24.81%), Postives = 164/395 (41.52%), Query Frame = 0

Query:  620 KFAKKYKGSAILGIAMLPFSVITSLLFPWLIIQVIDVHLSQGDMDGLLEYVFYMVIVLVVSYVVDTIYSYNLRKTGQYTITDMRSVLFARVLKLPRSYFDNTPIGVTLSRLTSDLETIGETFIQSVVGLVKDSINTIALLVMMFFIDWQLTLIVLVIMPPVMYLTVYVRNRLRALYK--------------------------------------------------VTRSTLARGI----TSITIAIMIWYGSEQVIEGALTLGVLIAFINTLEKVFVPIRDFTSQIASIQSSFAAFDHIEELF-VEPTEEEGRNLLPSNKVEQQLKNFVSLEFKNVSFRYKDDSPYVLKSVSFMLEKGHQIALVGSTGSGKSTILRLISKTYQDYEGSILLNG 959
            +F + YK   I+ +  L  + I+      L+  ++D      D D L      + +++ +      + +Y L       +  +R ++F   + +P SYFD    G  LSR+T D E +     Q++V +V++  + I LLV+MF+  WQL+L++  + P V +    V  R R + K                                                  VT    A  I     S  I  +++  S   I+  LT G      + +  +  P++  T+  +  Q   AA   +  L  +EP + EG+  +      ++ K  VS+  K+VSF Y       L+ VSF + +G  +ALVG +GSGKSTI  L ++ Y    GSI L+G
Sbjct:   18 QFIRLYKSGLIVAVIALVINAISDTYMISLLKPLLDEGFGNADSDFLRTLPLIIFVMMFIRGTSGFVSTYCLSWVSGNVVMLVRRMVFNHFMHMPVSYFDKEKTGNLLSRITYDSEQVSAATSQALVSIVREGASIIGLLVLMFYNSWQLSLVLFAVAPVVAWGIGVVSKRFRKISKNMQTMMGNVTASAEQMLKGHKVVLSYGGQDIERQRFDKVSNQMRQQSMKLVTAQAAANPIIQMIASFAIVAVLYLASIDSIKEQLTPGTFTVVFSAMFGLMRPLKALTNVTSQFQRGMAASQTLFALIDLEPEKNEGKYTV------ERAKGDVSV--KDVSFTYVGSEKPALEHVSFDIPRGKTVALVGRSGSGKSTIANLFNRFYDVDSGSITLDG 404          

HSP 3 Score: 83.9593 bits (206), Expect = 2.243e-15
Identity = 41/86 (47.67%), Postives = 61/86 (70.93%), Query Frame = 0

Query:  959 GIELAVAQGGQLMMLDEATSSVDSITEDLIQKAMQRLFKEKTVIAIAHRLSTVRHSDTILVLEKGEIVEQGSHQPLVAHNGIYAGL 1044
             I  A+ +   +++LDEATS++D+ +E  IQ A+  L K+KTV+ IAHRLST+  +D ILV++ G I+E+G+H  L+A NG YA L
Sbjct:  490 AIARALLRDAPVLILDEATSALDTESERAIQAALDELQKDKTVLVIAHRLSTIEKADEILVVDDGAIIERGNHADLIAKNGAYAQL 575          

BLAST of abc transporter permease vs. SwissProt
Match: gi|31340216|sp|Q89A97.1|MDLA_BUCBP (RecName: Full=Multidrug resistance-like ATP-binding protein MdlA)

HSP 1 Score: 202.601 bits (514), Expect = 3.215e-54
Identity = 137/481 (28.48%), Postives = 259/481 (53.85%), Query Frame = 0

Query:  141 RILSRIYALNPGRITEAALKSTLLQKLNRLPNSFHERFASGRLISIINNDLGGIRLLFGVGFLQFFNAL-LALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKALHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWAKSETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELDVKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQ-SVLVVSHRVNALEYMDEIIVLNEG 619
            R + R++           L+  +   L +  N F+ +  +G LI+ I ND+  +    G G L   ++L + +S+  + + +IS +LT+ S+IP+ I  +I +   K++ + + +      +L+      L+ I +IK+  +  +   +  K+     +  +KI +I   F P++     +  ++ + +G YM+   E++ GE+ +F+ Y  L+  P++    +  I +RG      +++++N     L   K    ++ ++ G    ++   F+YS   +TIL NI+F I  G+ +G+ G  GSGK+TL+  +   +++ +  +      +T F+  + R+ +  V Q  +LFS T+ +NI+ G      ++ ++++    S L ND+  F  G  T VGE+GIMLSGGQKQR+SIARALL  ++++I+DN LS+VD +TE  ILE L T  +N+ ++++ +HR+++L   D IIV+  G
Sbjct:   74 RYMWRLFLFGASYKLAIKLRIEIYNYLCQQKNDFYLKHKTGDLIARITNDVDKVVFAAGEGVLTLVDSLIMGVSVIIVMITQISWKLTIISLIPMPIMAIIIKRFGKKLYSSYHDAQTTFSHLNNYAQENLNNIHMIKAFGLENYYSKKFLKIAHKTRKKNIKIAKIDSKFNPIIHLFISISHLLAITIGSYMITYNEISTGELMSFILYLGLIIWPMLAFAWMFNIIERGSASWDRIKSMINN---NLFIHKKKYKNISNIPG-ILEVKINYFKYSKSNKTILKNINFKIRPGQILGICGPTGSGKSTLLKLIQRQIELYDGKISYHSIPITQFNIVEWRKKMSIVNQTTFLFSDTIANNIKLGKPYA--SQKEIEQATTFSDLHNDIMTFPQGYNTQVGERGIMLSGGQKQRISIARALLLKSEILILDNALSSVDNKTEINILENLKTWKKNKNTIIMCTHRLSSLINSDLIIVIENG 548          

HSP 2 Score: 61.6178 bits (148), Expect = 2.516e-8
Identity = 44/157 (28.03%), Postives = 76/157 (48.41%), Query Frame = 0

Query:  808 SITIAIMIWYGSEQVIEGALTLGVLIAFINTLEKVFVPIRDFTSQIASIQSSFAAFDHIEELFVEPTEEEGRNLLPSNKVEQQLKNFVS-LEFKNVSFRYKDDSPYVLKSVSFMLEKGHQIALVGSTGSGKSTILRLISKTYQDYEGSILLNGIELA 963
            SI+  + I  GS  +    ++ G L++FI  L  +  P+  F      I+   A++D I+ +          NL    K  + + N    LE K   F+Y   +  +LK+++F +  G  + + G TGSGKST+L+LI +  + Y+G I  + I + 
Sbjct:  253 SISHLLAITIGSYMITYNEISTGELMSFILYLGLIIWPMLAFAWMFNIIERGSASWDRIKSMI-------NNNLFIHKKKYKNISNIPGILEVKINYFKYSKSNKTILKNINFKIRPGQILGICGPTGSGKSTLLKLIQRQIELYDGKISYHSIPIT 402          

BLAST of abc transporter permease vs. SwissProt
Match: gi|81821097|sp|Q5P2S7.1|MSBA_AROAE (RecName: Full=Lipid A export ATP-binding/permease protein MsbA)

HSP 1 Score: 197.208 bits (500), Expect = 3.434e-52
Identity = 139/485 (28.66%), Postives = 256/485 (52.78%), Query Frame = 0

Query:  159 LKSTLLQKLNRLPNSFHERFASGRLISIIN----------NDLGGIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKALHLE-HMKRLQNLSAQLMSYLSGIDLIKSQQMSPWAKSETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELDVKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEGKFAKKYKGSAILG 632
            L+ TL   L RLPN++ ++ +SG LIS I            D   I +  G+  +  F  LL ++      WR++  L + +I+P+    V    G  R ++  ++  M  + +++++    + G  +++S     + +      ++     +LK+ +    + P L         ++L L   + +R E ++G++ A++T + LL  P+ QL  +++  QRG+ G +S+   L+ K PE+D  ++     + + G+   +R+LSFRY G +R +LD++SF +  G+ I ++G  GSGK+TL N +          + +   DV  ++  +LRR++  VTQ   LF+ TV +NI +G     L ++ V+   E       + R   G  TL+GE G+ LSGGQ+QRL+IARALL+   ++I+D   SA+D E+ER I   L   ++ ++ LV++HR++ +E  D I+V++ G+  ++   + +L 
Sbjct:  113 LRQTLFDSLLRLPNTYFDQHSSGHLISRITFNVTMVTGAATDAIKIVIREGLTVVFLFAYLLWMN------WRLT--LVMVAILPLISLMVRNASGKFRKQSRKIQVAMGDVTHVASET---IQGYRVVRSFGGEHYERERFRAASEDNTRKQLKMVKTSAVYTPTLQLVTYSAMAVVLFL--VLRLRGEASVGDLVAYITAAGLLPKPIRQLSEVSSTIQRGVAGAESIFEQLDDK-PEVDHGRIER---ERVSGR-IEVRDLSFRYPGSDREVLDSVSFTVEPGQMIALVGRSGSGKSTLANLIPRFYHHDRGQILIDGVDVEDYTLKNLRRHIALVTQQVTLFNDTVANNIAYGDL-AGLPRAAVEAAAEAGYAKEFIDRLPQGFDTLIGENGVTLSGGQRQRLAIARALLKNAPILILDEATSALDTESERHIQAALHRVMQARTTLVIAHRLSTIEQADVIMVMDHGRIVERGSHAELLA 578          

HSP 2 Score: 104.375 bits (259), Expect = 9.406e-22
Identity = 92/356 (25.84%), Postives = 165/356 (46.35%), Query Frame = 0

Query:  663 MDGL-LEYVFYMVIVLVVSY--VVDTIYSYNLRKTGQYTITDMRSVLFARVLKLPRSYFDNTPIGVTLSRLTSDLETIGETFIQSVVGLVKDSINTIALLVMMFFIDWQLTLIVLVIMPPVM----------------------------------YLTV-------YVRNRLRALYK-VTRSTLARGITSITIAI---MIWYGSEQVI-------EGALTLGVLIAFINTLEKVFVPIRDFTSQIASIQSSFAAFDHI-EELFVEPTEEEGRNLLPSNKVEQQLKNFVSLEFKNVSFRYKDDSPYVLKSVSFMLEKGHQIALVGSTGSGKSTILRLISKTYQDYEGSILLNGIEL 962
            +DG+ L +   ++IVL+ ++  +   + +Y L +     + D+R  LF  +L+LP +YFD    G  +SR+T ++  +      ++  ++++ +  + L   + +++W+LTL+++ I+P +                                   Y  V       Y R R RA  +  TR  L    TS        ++ Y +  V+        G  ++G L+A+I     +  PIR  +   ++IQ   A  + I E+L  +P  + GR  +   +V  ++      E +++SFRY      VL SVSF +E G  IALVG +GSGKST+  LI + Y    G IL++G+++
Sbjct:   71 LDGMELMHGVPLMIVLIAAWQGLGGYLGNYFLARVSLGLVHDLRQTLFDSLLRLPNTYFDQHSSGHLISRITFNVTMVTGAATDAIKIVIREGLTVVFLFAYLLWMNWRLTLVMVAILPLISLMVRNASGKFRKQSRKIQVAMGDVTHVASETIQGYRVVRSFGGEHYERERFRAASEDNTRKQLKMVKTSAVYTPTLQLVTYSAMAVVLFLVLRLRGEASVGDLVAYITAAGLLPKPIRQLSEVSSTIQRGVAGAESIFEQLDDKPEVDHGR--IERERVSGRI------EVRDLSFRYPGSDREVLDSVSFTVEPGQMIALVGRSGSGKSTLANLIPRFYHHDRGQILIDGVDV 418          

HSP 3 Score: 79.337 bits (194), Expect = 6.914e-14
Identity = 38/86 (44.19%), Postives = 59/86 (68.60%), Query Frame = 0

Query:  959 GIELAVAQGGQLMMLDEATSSVDSITEDLIQKAMQRLFKEKTVIAIAHRLSTVRHSDTILVLEKGEIVEQGSHQPLVAHNGIYAGL 1044
             I  A+ +   +++LDEATS++D+ +E  IQ A+ R+ + +T + IAHRLST+  +D I+V++ G IVE+GSH  L+A  G YA L
Sbjct:  501 AIARALLKNAPILILDEATSALDTESERHIQAALHRVMQARTTLVIAHRLSTIEQADVIMVMDHGRIVERGSHAELLAAGGHYARL 586          

BLAST of abc transporter permease vs. SwissProt
Match: gi|67468765|sp|Q7N6C6.1|MSBA_PHOLL (RecName: Full=Lipid A export ATP-binding/permease protein MsbA)

HSP 1 Score: 196.438 bits (498), Expect = 4.995e-52
Identity = 136/472 (28.81%), Postives = 250/472 (52.97%), Query Frame = 0

Query:  159 LKSTLLQKLNRLPNSFHERFASGRLISIINNDLGGIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKALHLEHMKRLQNLSAQLMSYLSGIDLIKSQQ---MSPWAKSETEKLNQLLLECR---LKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELDVKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEGKFAKK 624
            ++  L   +  +P SF ++ ++G L+S I  D   +        +       ++    + M+  S +L+L  I+   I  ++ RV  KR +++     K +QN   Q+ +  S   ++K  +   +      ETE+ N++    R   +K+        P++          +L    +  + + LT G+IT   +  + L  PL  L  +   +QRGM   Q++ +IL+ +  E D+ KL   ++K   G     RN++F Y  +E   L NIS  IPAGK + ++G  GSGK+T+ N L    DV E ++FL   D+  +  S LR  V  V+Q+ +LF+ TV +NI + +S+   ++ ++++  E++   + + + ++G  T++GE G++LSGGQ+QR++IARALL+ + ++I+D   SA+D E+ER I   L    +N++ LV++HR++ +E  DEI+V+ +G   ++
Sbjct:   99 MRRRLFSHMMGMPVSFFDQQSTGTLLSRITYDSEQVASSSSSALITVVREGASIIGLFVLMFYYSWQLSLILIVIAPIVSLVIRVVSKRFRSIS----KNMQNSMGQVTA--SAEQMLKGHKEVLIFGGQNVETERFNKVSNHMRQQGMKMVSASSISDPIIQLIASFALAFVLYAASFPDIMETLTAGKITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFSILDME-QEKDDGKL---ELKKANGD-IEFRNVTFCYPTKELPALQNISMYIPAGKIVALVGRSGSGKSTIANLLTRFYDVNEGNIFLDGHDLREYKLSSLRGQVALVSQNVHLFNDTVANNIAY-ASENRYSREEIEKAAEMAYAMDFIRKLDNGLDTMIGENGVLLSGGQRQRIAIARALLRDSPVLILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIENADEILVVEDGHIVER 558          

HSP 2 Score: 103.605 bits (257), Expect = 1.479e-21
Identity = 103/431 (23.90%), Postives = 193/431 (44.78%), Query Frame = 0

Query:  686 IYSYNLRKTGQYTITDMRSVLFARVLKLPRSYFDNTPIGVTLSRLTSDLETIGETFIQSVVGLVKDSINTIALLVMMFFIDWQLTLIVLVIMPPVMYLTVYV---------RNRLRALYKVTRST--LARG--------------------------------------------ITSITIAIMIWYGSEQVIEGALTLGVLIAFINTLEKVFVPIRDFTSQIASIQSSFAAFDHIEELF-VEPTEEEGRNLLPSNKVEQQLKNFVSLEFKNVSFRYKDDSPYVLKSVSFMLEKGHQIALVGSTGSGKSTILRLISKTYQDYEGSILLNGIELA----VAQGGQLMMLDEATSSV-DSITEDLIQKAMQRLFKEKTVIA--IAHRLSTVRHSDT---ILVLEKGEIVEQGSHQPLVAHNGIYAGLLKESIV 1050
            + SY +       +  MR  LF+ ++ +P S+FD    G  LSR+T D E +  +   +++ +V++  + I L V+MF+  WQL+LI++VI  P++ L + V         +N   ++ +VT S   + +G                                            I S  +A +++  S   I   LT G +    +++  +  P++  T+  A  Q   AA   +  +  +E  +++G       K+E +  N   +EF+NV+F Y       L+++S  +  G  +ALVG +GSGKSTI  L+++ Y   EG+I L+G +L      +  GQ+ ++ +      D++  ++   +  R  +E+   A  +A+ +  +R  D     ++ E G ++  G  Q +     I   LL++S V
Sbjct:   83 VSSYCISWVSGKVVMQMRRRLFSHMMGMPVSFFDQQSTGTLLSRITYDSEQVASSSSSALITVVREGASIIGLFVLMFYYSWQLSLILIVI-APIVSLVIRVVSKRFRSISKNMQNSMGQVTASAEQMLKGHKEVLIFGGQNVETERFNKVSNHMRQQGMKMVSASSISDPIIQLIASFALAFVLYAASFPDIMETLTAGKITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFSILDMEQEKDDG-------KLELKKANG-DIEFRNVTFCYPTKELPALQNISMYIPAGKIVALVGRSGSGKSTIANLLTRFYDVNEGNIFLDGHDLREYKLSSLRGQVALVSQNVHLFNDTVANNIAYASENRYSREEIEKAAEMAYAMDFIRKLDNGLDTMIGENGVLLSGGQRQRI----AIARALLRDSPV 500          

HSP 3 Score: 80.4925 bits (197), Expect = 3.065e-14
Identity = 43/100 (43.00%), Postives = 65/100 (65.00%), Query Frame = 0

Query:  952 EGSILLNG-------IELAVAQGGQLMMLDEATSSVDSITEDLIQKAMQRLFKEKTVIAIAHRLSTVRHSDTILVLEKGEIVEQGSHQPLVAHNGIYAGL 1044
            E  +LL+G       I  A+ +   +++LDEATS++D+ +E  IQ A+  L K +T + IAHRLST+ ++D ILV+E G IVE+G H  L+  NG+Y+ L
Sbjct:  475 ENGVLLSGGQRQRIAIARALLRDSPVLILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIENADEILVVEDGHIVERGDHLSLLERNGVYSQL 574          

BLAST of abc transporter permease vs. SwissProt
Match: gi|122064511|sp|Q4KJB2.1|MSBA_PSEF5 (RecName: Full=Lipid A export ATP-binding/permease protein MsbA)

HSP 1 Score: 196.438 bits (498), Expect = 7.708e-52
Identity = 144/485 (29.69%), Postives = 256/485 (52.78%), Query Frame = 0

Query:  159 LKSTLLQKLNRLPNSFHERFASGRLISIINNDL--------GGIRLLF--GVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKALHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWAKSETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELDVKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLAND-VTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEGKFAKKYKGSAILG 632
            L+  L   L  LPN + ++  SG LIS I  ++          I+++   G+  +  F +LL ++      WR++  L + +I+P+ IA V+ R   K+ +    +    + +++      + G  +++S     + +      +Q   + +L++TR    + P+L         +++ L   + +R + + GE+ A++T + LL  P+ QL  +++  Q+G+ G +S+   L+ + PE+D   +   +  S+ G    +RNLSF Y G ER +LD+ISF I  GK + ++G  GSGK+TL N +       +  + L   +V  F   +LRR++  VTQ   LFS TV +NI +G  D   A  +  E       A D + +   G  T VGE G++LSGGQ+QRL+IARALL+   L+I+D   SA+D E+ER I   L   ++ ++ LV++HR++ +E  D I+V+++G+  ++   + +L 
Sbjct:  114 LRVQLFNNLLTLPNRYFDKHNSGHLISRITFNVTMVTGAATDAIKVVIREGMTVIFLFGSLLWMN------WRLT--LVMIAILPL-IA-VMVRTASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGETYEQQRFLAASQGNTDKQLRMTRTGAIYTPLLQLVIYSAMAVLMFL--VLYLRGDASAGEMVAYITMAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDVE-PEVDRGTV---ERASINGH-LEVRNLSFTYPGTERQVLDDISFSIEPGKMVALVGRSGSGKSTLANLIPRFYHHDKGQILLDGTEVEDFRLLNLRRHIAQVTQHVTLFSDTVANNIAYG--DLAGAPREDIEKAAADAYAMDFIAQLPEGLDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDKVMKGRTTLVIAHRLSTIEKADLILVMDQGRIVERGSHAQLLA 579          

HSP 2 Score: 100.523 bits (249), Expect = 1.539e-20
Identity = 91/345 (26.38%), Postives = 157/345 (45.51%), Query Frame = 0

Query:  673 MVIVLVVSY--VVDTIYSYNLRKTGQYTITDMRSVLFARVLKLPRSYFDNTPIGVTLSRLTSDLETIGETFIQSVVGLVKDSINTIALLVMMFFIDWQLTLIVLVIMPPVMYLTVYVRNRLRAL---------------------YKVTRS------------TLARGIT------SITIAI------MIWYGSEQVI-------EGALTLGVLIAFINTLEKVFVPIRDFTSQIASIQSSFAAFDHI-EELFVEPTEEEGRNLLPSNKVEQQLKNFVSLEFKNVSFRYKDDSPYVLKSVSFMLEKGHQIALVGSTGSGKSTILRLISKTYQDYEGSILLNGIEL 962
            ++IVL+ ++  +   + +Y L K     + D+R  LF  +L LP  YFD    G  +SR+T ++  +      ++  ++++ +  I L   + +++W+LTL+++ I+P +  +      + R                       Y+V RS              ++G T      + T AI      ++ Y +  V+        G  + G ++A+I     +  PIR  +   ++IQ   A  + I E+L VEP  + G        VE+   N   LE +N+SF Y      VL  +SF +E G  +ALVG +GSGKST+  LI + Y   +G ILL+G E+
Sbjct:   83 LLIVLIAAWQGLGSYLGNYFLAKVSLGLVHDLRVQLFNNLLTLPNRYFDKHNSGHLISRITFNVTMVTGAATDAIKVVIREGMTVIFLFGSLLWMNWRLTLVMIAILPLIAVMVRTASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGETYEQQRFLAASQGNTDKQLRMTRTGAIYTPLLQLVIYSAMAVLMFLVLYLRGDASAGEMVAYITMAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDVEPEVDRG-------TVERASING-HLEVRNLSFTYPGTERQVLDDISFSIEPGKMVALVGRSGSGKSTLANLIPRFYHHDKGQILLDGTEV 419          

HSP 3 Score: 84.3445 bits (207), Expect = 2.292e-15
Identity = 44/100 (44.00%), Postives = 67/100 (67.00%), Query Frame = 0

Query:  952 EGSILLNG-------IELAVAQGGQLMMLDEATSSVDSITEDLIQKAMQRLFKEKTVIAIAHRLSTVRHSDTILVLEKGEIVEQGSHQPLVAHNGIYAGL 1044
            E  +LL+G       I  A+ +   L++LDEATS++D+ +E  IQ A+ ++ K +T + IAHRLST+  +D ILV+++G IVE+GSH  L+A NG Y+ L
Sbjct:  488 ENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDKVMKGRTTLVIAHRLSTIEKADLILVMDQGRIVERGSHAQLLAQNGYYSRL 587          

BLAST of abc transporter permease vs. SwissProt
Match: gi|46396484|sp|Q8ZGA9.1|MSBA_YERPE (RecName: Full=Lipid A export ATP-binding/permease protein MsbA >gi|67468750|sp|Q66CI3.1|MSBA_YERPS RecName: Full=Lipid A export ATP-binding/permease protein MsbA >gi|122064533|sp|Q1CA68.1|MSBA_YERPA RecName: Full=Lipid A export ATP-binding/permease protein MsbA >gi|122064534|sp|Q1CGH0.1|MSBA_YERPN RecName: Full=Lipid A export ATP-binding/permease protein MsbA)

HSP 1 Score: 195.667 bits (496), Expect = 8.699e-52
Identity = 134/472 (28.39%), Postives = 249/472 (52.75%), Query Frame = 0

Query:  159 LKSTLLQKLNRLPNSFHERFASGRLISIINNDLGGIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKALHLEHMKRLQNLSAQLMSYLSGIDLIKSQQ---MSPWAKSETEKLNQLLLECR---LKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELDVKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEGKFAKK 624
            ++  L   +  +P SF ++ ++G L+S I  D   +        +       ++    + M+  S +L+L  I+   I  +  R+  KR + +     K +QN   ++ +  S   ++K  +   +    K ETE+ + +    R   +K+        P++         ++L    +  + + LT G IT   +  + L  PL  L  + T +QRGM   Q++ +IL+ +  E DE KL   +V+  KG     R+++F Y G++   L++I+  + AGK + ++G  GSGK+T+ N L    DV E S+ L   D+  +    LR  V  V+Q+ +LF+ TV +NI +  ++ + ++++++E   ++   + + + EHG  T++GE GIMLSGGQ+QR++IARALL+   ++I+D   SA+D E+ER I   L    +N++ LV++HR++ +E  DEI+V+ +G+  ++
Sbjct:  100 IRRRLFSHMMGMPVSFFDQQSTGTLLSRITYDSEQVAASSSSALVTVVREGASIIGLFIMMFYYSWQLSLILIVIAPIVSISIRLVSKRFRNIS----KNMQNTMGEVTT--SAEQMLKGHKEVLIFGGQKVETERFDAVSNRMRQQGMKLVSASSISDPIIQLIASFALALVLYAASFPSVMETLTAGTITVVFSAMIALMRPLKSLTNVNTQFQRGMAACQTLFSILDME-QEKDEGKL---EVERAKGD-IEFRHVTFYYPGKDTPALNDINIHLEAGKTVALVGRSGSGKSTIANLLTRFYDVSEGSILLDGHDLRDYRLGALRNQVALVSQNVHLFNDTVANNIAYARNE-QYSRAEIEEAARMAYAMDFINKMEHGLDTVIGENGIMLSGGQRQRIAIARALLRNCPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVIEDGRIVER 559          

HSP 2 Score: 108.997 bits (271), Expect = 2.937e-23
Identity = 86/343 (25.07%), Postives = 157/343 (45.77%), Query Frame = 0

Query:  676 VLVVSYVVDTIYSYNLRKTGQYTITDMRSVLFARVLKLPRSYFDNTPIGVTLSRLTSDLETIGETFIQSVVGLVKDSINTIALLVMMFFIDWQLTLIVLVIMPPVMYLTV-------------------------------------------------YVRNRLR--ALYKVTRSTLA----RGITSITIAIMIWYGSEQVIEGALTLGVLIAFINTLEKVFVPIRDFTSQIASIQSSFAAFDHIEELF-VEPTEEEGRNLLPSNKVEQQLKNFVSLEFKNVSFRYKDDSPYVLKSVSFMLEKGHQIALVGSTGSGKSTILRLISKTYQDYEGSILLNGIEL 962
            ++VV  V   + SY +       +  +R  LF+ ++ +P S+FD    G  LSR+T D E +  +   ++V +V++  + I L +MMF+  WQL+LI++VI  P++ +++                                                  V NR+R   +  V+ S+++    + I S  +A++++  S   +   LT G +    + +  +  P++  T+     Q   AA   +  +  +E  ++EG+  +   K +        +EF++V+F Y       L  ++  LE G  +ALVG +GSGKSTI  L+++ Y   EGSILL+G +L
Sbjct:   74 LMVVRGVTGFVSSYCISWVSGKVVMHIRRRLFSHMMGMPVSFFDQQSTGTLLSRITYDSEQVAASSSSALVTVVREGASIIGLFIMMFYYSWQLSLILIVI-APIVSISIRLVSKRFRNISKNMQNTMGEVTTSAEQMLKGHKEVLIFGGQKVETERFDAVSNRMRQQGMKLVSASSISDPIIQLIASFALALVLYAASFPSVMETLTAGTITVVFSAMIALMRPLKSLTNVNTQFQRGMAACQTLFSILDMEQEKDEGKLEVERAKGD--------IEFRHVTFYYPGKDTPALNDINIHLEAGKTVALVGRSGSGKSTIANLLTRFYDVSEGSILLDGHDL 407          

HSP 3 Score: 77.7962 bits (190), Expect = 1.940e-13
Identity = 42/100 (42.00%), Postives = 63/100 (63.00%), Query Frame = 0

Query:  952 EGSILLNG-------IELAVAQGGQLMMLDEATSSVDSITEDLIQKAMQRLFKEKTVIAIAHRLSTVRHSDTILVLEKGEIVEQGSHQPLVAHNGIYAGL 1044
            E  I+L+G       I  A+ +   +++LDEATS++D+ +E  IQ A+  L K +T + IAHRLST+  +D I+V+E G IVE+G H  L+   G+YA L
Sbjct:  476 ENGIMLSGGQRQRIAIARALLRNCPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVIEDGRIVERGVHAELLVQQGVYAQL 575          

BLAST of abc transporter permease vs. nr
Match: gi|1330684989|ref|WP_102554114.1| (ABC transporter ATP-binding protein [Vibrio splendidus] >gi|1327072045|gb|PMM40113.1| ABC transporter permease [Vibrio splendidus])

HSP 1 Score: 1110.9 bits (2872), Expect = 0.000e+0
Identity = 546/561 (97.33%), Postives = 552/561 (98.40%), Query Frame = 0

Query:   71 EFIAHYLRMNRTSYLLAVVFIFLVNWLQVEIPRYIQLAIDLIYDASSSGHQQLQTYVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLPNSFHERFASGRLISIINNDLGGIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKALHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWAKSETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELDVKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEGKFAKKYKGSAIL 631
            +FIAHYLRMNRTSYLLAVVFIFLVNWLQVEIPRYIQLAIDLI DASSSGHQQLQTYVW+VVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLPNSFHERFASGRLISIINNDLGGIRLLFG+GFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKALHL+HMKRLQNLSAQLMSYLSGIDLIKSQQMSPWAKSETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELDVKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPE SVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEGK   K   + +L
Sbjct:    5 QFIAHYLRMNRTSYLLAVVFIFLVNWLQVEIPRYIQLAIDLIDDASSSGHQQLQTYVWMVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLPNSFHERFASGRLISIINNDLGGIRLLFGIGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKALHLDHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWAKSETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELDVKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPESSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEGKVIAKGDHNTLL 565          

BLAST of abc transporter permease vs. nr
Match: gi|515643198|ref|WP_017075798.1| (ABC transporter ATP-binding protein [Vibrio splendidus] >gi|1067290531|gb|OED69762.1| ABC transporter permease [Vibrio splendidus ZS-139])

HSP 1 Score: 1108.98 bits (2867), Expect = 0.000e+0
Identity = 547/561 (97.50%), Postives = 551/561 (98.22%), Query Frame = 0

Query:   71 EFIAHYLRMNRTSYLLAVVFIFLVNWLQVEIPRYIQLAIDLIYDASSSGHQQLQTYVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLPNSFHERFASGRLISIINNDLGGIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKALHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWAKSETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELDVKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEGKFAKKYKGSAIL 631
            +FIAHYLRMNRTSYLLAVVFIFLVNWLQVEIPRYIQLAIDLI DASSSGHQQLQTYVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLPNSFHE FASGRLISIINNDLGGIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKALHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWAKSETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELDVKSLKGKTFSIRNLSFRYSGEERTILD+ISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPE SVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEGK   K   + +L
Sbjct:    5 QFIAHYLRMNRTSYLLAVVFIFLVNWLQVEIPRYIQLAIDLIDDASSSGHQQLQTYVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLPNSFHECFASGRLISIINNDLGGIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKALHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWAKSETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELDVKSLKGKTFSIRNLSFRYSGEERTILDDISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPESSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEGKVIAKGDHTTLL 565          

BLAST of abc transporter permease vs. nr
Match: gi|1330589009|ref|WP_102491921.1| (ABC transporter ATP-binding protein [Vibrio splendidus] >gi|1327291213|gb|PMO53048.1| ABC transporter permease [Vibrio splendidus])

HSP 1 Score: 1078.93 bits (2789), Expect = 0.000e+0
Identity = 528/561 (94.12%), Postives = 544/561 (96.97%), Query Frame = 0

Query:   71 EFIAHYLRMNRTSYLLAVVFIFLVNWLQVEIPRYIQLAIDLIYDASSSGHQQLQTYVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLPNSFHERFASGRLISIINNDLGGIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKALHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWAKSETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELDVKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEGKFAKKYKGSAIL 631
            +FIAHYLRMNRTSYLLA+VFIFLVNWLQVEIPRYIQLAIDLI DASS+GHQQLQTYVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLP+SFHERFASGRLISIINNDL GIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMK LHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPW K+ETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQS QTILNAKVPELDEDKLTELDV+SLKGKTFS+RNLSF YSGEER ILD+ISFDIPAGKK+GVLGGIG+GKTTLVNCLNHHLDVPE SVFLG+RDVTSFSRSDLRRYVKTVTQDP+LFSATVEDNIRFGS DT+LAKSQVDEVLELSQLA+DVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLF RLENQSVLVVSHRVNALEYMDEIIVLNEGK   K   + +L
Sbjct:    5 QFIAHYLRMNRTSYLLAIVFIFLVNWLQVEIPRYIQLAIDLIDDASSTGHQQLQTYVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLPSSFHERFASGRLISIINNDLSGIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKTLHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWVKTETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSAQTILNAKVPELDEDKLTELDVESLKGKTFSVRNLSFSYSGEERVILDDISFDIPAGKKVGVLGGIGAGKTTLVNCLNHHLDVPESSVFLGERDVTSFSRSDLRRYVKTVTQDPFLFSATVEDNIRFGSLDTDLAKSQVDEVLELSQLASDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFKRLENQSVLVVSHRVNALEYMDEIIVLNEGKVIAKGDHATLL 565          

BLAST of abc transporter permease vs. nr
Match: gi|914659654|ref|WP_050650756.1| (MULTISPECIES: ABC transporter ATP-binding protein [Vibrio] >gi|858000939|emb|CDT73852.1| ABC transport system, Transmembrane and ATP-binding site (ABC-IM) [Vibrio sp. J2-31])

HSP 1 Score: 1078.93 bits (2789), Expect = 0.000e+0
Identity = 529/561 (94.30%), Postives = 544/561 (96.97%), Query Frame = 0

Query:   71 EFIAHYLRMNRTSYLLAVVFIFLVNWLQVEIPRYIQLAIDLIYDASSSGHQQLQTYVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLPNSFHERFASGRLISIINNDLGGIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKALHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWAKSETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELDVKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEGKFAKKYKGSAIL 631
            +FIAHYLRMNRTSYLLA+VFIFLVNWLQVEIPRYIQLAIDLI DASS+GHQQLQTYVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLP+SFHERFASGRLISIINNDL GIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMK LHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPW K+ETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQS QTILNAKVPELDEDKLTELDV+SLKGKTFS+RNLSF YSGEER ILD+ISFDIPAGKK+GVLGGIG+GKTTLVNCLNHHLDVPE SVFLG+RDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGS DTELAKSQVDEVLELSQLA+DVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLF RLENQSVLVVSHRVNALEYMDE+IVLNEGK   K   + +L
Sbjct:    5 QFIAHYLRMNRTSYLLAIVFIFLVNWLQVEIPRYIQLAIDLIDDASSTGHQQLQTYVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLPSSFHERFASGRLISIINNDLSGIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKTLHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWVKAETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSAQTILNAKVPELDEDKLTELDVESLKGKTFSVRNLSFSYSGEERVILDDISFDIPAGKKVGVLGGIGAGKTTLVNCLNHHLDVPEGSVFLGERDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSLDTELAKSQVDEVLELSQLASDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFKRLENQSVLVVSHRVNALEYMDEVIVLNEGKVIAKGDHATLL 565          

BLAST of abc transporter permease vs. nr
Match: gi|914654401|ref|WP_050645650.1| (ABC transporter ATP-binding protein [Vibrio sp. J2-6] >gi|857798112|emb|CDS98380.1| ABC transport system, Transmembrane and ATP-binding site (ABC-IM) [Vibrio sp. J2-6])

HSP 1 Score: 1078.93 bits (2789), Expect = 0.000e+0
Identity = 529/561 (94.30%), Postives = 544/561 (96.97%), Query Frame = 0

Query:   71 EFIAHYLRMNRTSYLLAVVFIFLVNWLQVEIPRYIQLAIDLIYDASSSGHQQLQTYVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLPNSFHERFASGRLISIINNDLGGIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKALHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWAKSETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELDVKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEGKFAKKYKGSAIL 631
            +FIAHYLRMNRTSYLLA+VFIFLVNWLQVEIPRYIQLAIDLI DASS+GHQQLQTYVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLP+SFHERFASGRLISIINNDL GIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMK LHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPW K+ETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQS QTILNAKVPELDEDKLTELDV+SLKGKTFS+RNLSF YSGEER ILD+ISFDIPAGKK+GVLGGIG+GKTTLVNCLNHHLDVPE SVFLG+RDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGS DT+LAKSQVDEVLELSQLA+DVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLF RLENQSVLVVSHRVNALEYMDEIIVLNEGK   K   + +L
Sbjct:    5 QFIAHYLRMNRTSYLLAIVFIFLVNWLQVEIPRYIQLAIDLIDDASSTGHQQLQTYVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLPSSFHERFASGRLISIINNDLSGIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKTLHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWVKAETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSAQTILNAKVPELDEDKLTELDVESLKGKTFSVRNLSFSYSGEERVILDDISFDIPAGKKVGVLGGIGAGKTTLVNCLNHHLDVPEGSVFLGERDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSLDTDLAKSQVDEVLELSQLASDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFKRLENQSVLVVSHRVNALEYMDEIIVLNEGKVIAKGDHATLL 565          

BLAST of abc transporter permease vs. nr
Match: gi|914652613|ref|WP_050644018.1| (ABC transporter ATP-binding protein [Vibrio sp. J2-12] >gi|857963397|emb|CDU04743.1| ABC transport system, Transmembrane and ATP-binding site (ABC-IM) [Vibrio sp. J2-12])

HSP 1 Score: 1078.54 bits (2788), Expect = 0.000e+0
Identity = 529/561 (94.30%), Postives = 544/561 (96.97%), Query Frame = 0

Query:   71 EFIAHYLRMNRTSYLLAVVFIFLVNWLQVEIPRYIQLAIDLIYDASSSGHQQLQTYVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLPNSFHERFASGRLISIINNDLGGIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKALHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWAKSETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELDVKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEGKFAKKYKGSAIL 631
            +FIAHYLRMNRTSYLLA+VFIFLVNWLQVEIPRYIQLAIDLI DASS+GHQQLQTYVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLP+SFHERFASGRLISIINNDL GIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMK LHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPW K+ETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQS QTILNAKVPELDEDKLTELDV+SLKGKTFS+RNLSF YSGEER ILD+ISFDIPAGKK+GVLGGIG+GKTTLVNCLNHHLDVP+ SVFLG+RDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGS DT+LAKSQVDEVLELSQLA+DVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLF RLENQSVLVVSHRVNALEYMDEIIVLNEGK   K   S +L
Sbjct:    5 QFIAHYLRMNRTSYLLAIVFIFLVNWLQVEIPRYIQLAIDLIDDASSTGHQQLQTYVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLPSSFHERFASGRLISIINNDLSGIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKTLHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWVKAETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSAQTILNAKVPELDEDKLTELDVESLKGKTFSVRNLSFSYSGEERVILDDISFDIPAGKKVGVLGGIGAGKTTLVNCLNHHLDVPKGSVFLGERDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSLDTDLAKSQVDEVLELSQLASDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFKRLENQSVLVVSHRVNALEYMDEIIVLNEGKVIAKGDHSTLL 565          

BLAST of abc transporter permease vs. nr
Match: gi|873906675|ref|WP_048612944.1| (MULTISPECIES: ABC transporter ATP-binding protein [Vibrio] >gi|857828306|emb|CDS99330.1| ABC transport system, Transmembrane and ATP-binding site (ABC-IM) [Vibrio sp. J2-1] >gi|857875243|emb|CDT49517.1| ABC transport system, Transmembrane and ATP-binding site (ABC-IM) [Vibrio sp. J2-26] >gi|857916528|emb|CDU09086.1| ABC transport system, Transmembrane and ATP-binding site (ABC-IM) [Vibrio sp. J2-8])

HSP 1 Score: 1078.16 bits (2787), Expect = 0.000e+0
Identity = 528/561 (94.12%), Postives = 544/561 (96.97%), Query Frame = 0

Query:   71 EFIAHYLRMNRTSYLLAVVFIFLVNWLQVEIPRYIQLAIDLIYDASSSGHQQLQTYVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLPNSFHERFASGRLISIINNDLGGIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKALHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWAKSETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELDVKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEGKFAKKYKGSAIL 631
            +FIAHYLRMNRTSYLLA+VFIFLVNWLQVEIPRYIQLAIDLI DASS+GHQQLQTYVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLP+SFHERFASGRLISIINNDL GIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMK LHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPW K+ETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQS QTILNAKVPELDEDKLTELDVKSLKGKTFS+RNLSF YSGEER ILD+ISFDIPAGKK+GVLGGIG+GKTTLVNCLNHHLDVPE SVFLG+RDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGS DT+LAKSQVDEVLELSQLA+DVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLF RL+NQSVLVVSHRVNALEYMDE+IVLNEGK   K   + +L
Sbjct:    5 QFIAHYLRMNRTSYLLAIVFIFLVNWLQVEIPRYIQLAIDLIDDASSTGHQQLQTYVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLPSSFHERFASGRLISIINNDLSGIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKTLHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWVKAETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSAQTILNAKVPELDEDKLTELDVKSLKGKTFSVRNLSFSYSGEERVILDDISFDIPAGKKVGVLGGIGAGKTTLVNCLNHHLDVPEGSVFLGERDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSLDTDLAKSQVDEVLELSQLASDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFKRLKNQSVLVVSHRVNALEYMDEVIVLNEGKVIAKGDHATLL 565          

BLAST of abc transporter permease vs. nr
Match: gi|1330592720|ref|WP_102495261.1| (ABC transporter ATP-binding protein [Vibrio splendidus] >gi|1326861662|gb|PMK36912.1| ABC transporter permease [Vibrio splendidus] >gi|1327240700|gb|PMO04065.1| ABC transporter permease [Vibrio splendidus])

HSP 1 Score: 1077.77 bits (2786), Expect = 0.000e+0
Identity = 527/561 (93.94%), Postives = 544/561 (96.97%), Query Frame = 0

Query:   71 EFIAHYLRMNRTSYLLAVVFIFLVNWLQVEIPRYIQLAIDLIYDASSSGHQQLQTYVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLPNSFHERFASGRLISIINNDLGGIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKALHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWAKSETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELDVKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEGKFAKKYKGSAIL 631
            +FIAHYLRMNRTSYLLA+VFIFLVNWLQVEIPRYIQLAIDLI DASS+GHQQLQ+YVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLP+SFHERFASGRLISIINNDL GIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMK LHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPW K+ETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQS QTILNAKVPELDEDKLTELDV+SLKGKTFS+RNLSF YSGEER ILD+ISFDIPAGKK+GVLGGIG+GKTTLVNCLNHHLDVPE SVFLG+RDVTSFSRSDLRRYVKTVTQDP+LFSATVEDNIRFGS DT+LAKSQVDEVLELSQLA+DVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLF RLENQSVLVVSHRVNALEYMDEIIVLNEGK   K   + +L
Sbjct:    5 QFIAHYLRMNRTSYLLAIVFIFLVNWLQVEIPRYIQLAIDLIDDASSTGHQQLQSYVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLPSSFHERFASGRLISIINNDLSGIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKTLHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWVKTETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSAQTILNAKVPELDEDKLTELDVESLKGKTFSVRNLSFSYSGEERVILDDISFDIPAGKKVGVLGGIGAGKTTLVNCLNHHLDVPESSVFLGERDVTSFSRSDLRRYVKTVTQDPFLFSATVEDNIRFGSLDTDLAKSQVDEVLELSQLASDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFKRLENQSVLVVSHRVNALEYMDEIIVLNEGKVIAKGDHATLL 565          

BLAST of abc transporter permease vs. nr
Match: gi|1140784735|ref|WP_076645217.1| (ABC transporter ATP-binding protein [Vibrio sp. 10N.222.47.A9] >gi|1135587138|gb|OMO33669.1| ABC transporter permease [Vibrio sp. 10N.222.47.A9])

HSP 1 Score: 1077.77 bits (2786), Expect = 0.000e+0
Identity = 526/561 (93.76%), Postives = 545/561 (97.15%), Query Frame = 0

Query:   71 EFIAHYLRMNRTSYLLAVVFIFLVNWLQVEIPRYIQLAIDLIYDASSSGHQQLQTYVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLPNSFHERFASGRLISIINNDLGGIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKALHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWAKSETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELDVKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEGKFAKKYKGSAIL 631
            +FIAHYLRMNRTSYLLA+VFIFLVNWLQVEIPRYIQLAIDLI DASS+GHQQLQ+YVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLP+SFHERFASGRLISIINNDL GIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKALHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPW K+ETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQS QTILNAKVPELDEDKLTELDV+SL+GKTFS+RNLSF YSGEER ILD+ISFDIPAGKK+GVLGGIG+GKTTLVNCLNHHLDVPE SVFLG+RD+TSFSRSDLRRYVKTVTQDP+LFSATVEDNIRFGS DT+LAKSQVDEVLELSQLA+DVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLF RLENQSVLVVSHRVNALEYMDEIIVLNEGK   K   + +L
Sbjct:    5 QFIAHYLRMNRTSYLLAIVFIFLVNWLQVEIPRYIQLAIDLIDDASSTGHQQLQSYVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLPSSFHERFASGRLISIINNDLSGIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKALHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWVKAETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSAQTILNAKVPELDEDKLTELDVESLRGKTFSVRNLSFSYSGEERVILDDISFDIPAGKKVGVLGGIGAGKTTLVNCLNHHLDVPESSVFLGERDITSFSRSDLRRYVKTVTQDPFLFSATVEDNIRFGSLDTDLAKSQVDEVLELSQLASDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFKRLENQSVLVVSHRVNALEYMDEIIVLNEGKVIAKGDHATLL 565          

BLAST of abc transporter permease vs. nr
Match: gi|914658038|ref|WP_050649223.1| (ABC transporter ATP-binding protein [Vibrio sp. J2-4] >gi|857885698|emb|CDT62809.1| ABC transport system, Transmembrane and ATP-binding site (ABC-IM) [Vibrio sp. J2-4])

HSP 1 Score: 1077.77 bits (2786), Expect = 0.000e+0
Identity = 528/561 (94.12%), Postives = 544/561 (96.97%), Query Frame = 0

Query:   71 EFIAHYLRMNRTSYLLAVVFIFLVNWLQVEIPRYIQLAIDLIYDASSSGHQQLQTYVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLPNSFHERFASGRLISIINNDLGGIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKALHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWAKSETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSVQTILNAKVPELDEDKLTELDVKSLKGKTFSIRNLSFRYSGEERTILDNISFDIPAGKKIGVLGGIGSGKTTLVNCLNHHLDVPERSVFLGDRDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSSDTELAKSQVDEVLELSQLANDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFTRLENQSVLVVSHRVNALEYMDEIIVLNEGKFAKKYKGSAIL 631
            +FIAHYLRMNRTSYLLA+VFIFLVNWLQVEIPRYIQLAIDLI DASS+GHQQLQTYVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLP+SFHERFASGRLISIINNDL GIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMK LHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPW K+ETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQS QTILNAKVPELDEDKLTELDV+SLKGKTFS+RNLSF YSGEER ILD+ISFDIPAGKK+GVLGGIG+GKTTLVNCLNHHLDVPE SVFLG+RDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGS DT+LAKSQVDEVLELSQLA+DVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLF RLENQSVLVVSHRVNALEYMDE+IVLNEGK   K   + +L
Sbjct:    5 QFIAHYLRMNRTSYLLAIVFIFLVNWLQVEIPRYIQLAIDLIDDASSTGHQQLQTYVWIVVGMSVAMVVVRILSRIYALNPGRITEAALKSTLLQKLNRLPSSFHERFASGRLISIINNDLSGIRLLFGVGFLQFFNALLALSLTPLYMWRISPELTLYSIIPISIAFVIFRVGFKRMKTLHLEHMKRLQNLSAQLMSYLSGIDLIKSQQMSPWVKAETEKLNQLLLECRLKITRIQVFFMPVLDYANDLMKIIILGLGGYMLMRQELTLGEITAFLTYSVLLAMPLMQLGRIATIYQRGMVGIQSAQTILNAKVPELDEDKLTELDVESLKGKTFSVRNLSFSYSGEERVILDDISFDIPAGKKVGVLGGIGAGKTTLVNCLNHHLDVPEGSVFLGERDVTSFSRSDLRRYVKTVTQDPYLFSATVEDNIRFGSLDTDLAKSQVDEVLELSQLASDVTRFEHGDQTLVGEKGIMLSGGQKQRLSIARALLQPTDLIIMDNVLSAVDYETERKILEGLFKRLENQSVLVVSHRVNALEYMDEVIVLNEGKVIAKGDHATLL 565