syntaxin-18 isoform x1, maker-scaffold156_size297567-snap-gene-0.20 (gene) Tigriopus kingsejongensis

Overview
Namesyntaxin-18 isoform x1
Unique Namemaker-scaffold156_size297567-snap-gene-0.20
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of syntaxin-18 isoform x1 vs. L. salmonis genes
Match: EMLSAG00000000943 (supercontig:LSalAtl2s:LSalAtl2s1166:162994:164031:1 gene:EMLSAG00000000943 transcript:EMLSAT00000000943 description:"snap_masked-LSalAtl2s1166-processed-gene-1.14")

HSP 1 Score: 132.109 bits (331), Expect = 1.331e-36
Identity = 97/323 (30.03%), Postives = 159/323 (49.23%), Query Frame = 0
Query:   41 LRRVSLRGGLEPLES---------------LARDIVANTTRLKEFLLDHRSDYVDVVRAAWSGQCGLTHQQKDHIDAGANRFIRTCQGLITKFQRDLDQSSALSGERRSHLAAVGQILAGYLKAVCRIYAQQQAIRVQRELEFQKLARLEIKARKSSESQPRDSRRLESDLLSRLGHSSSSSMDSSDEEATSESSPKRRKSEDIPLTASSNYPEEEEEVSEL-TPDEIQMFEQENAQLYQDFMQVKDSVHQIQNKVVKIAELQDVFTEKVLQQKGDIDLVHHHAVSTTENVKDANEELRKAIQNQASIRVYILFFLLMMSFSL 347
            L  +S R G+EPL+                 AR I+ +  ++  FL +                  L+ +++D I+ GA   +RT + LITK ++D+D +S +  + ++H          +L  V + + +Q+ IR++     ++++RL                               SS+ S D                 P    + Y E+EE + E  +PDEIQ+F++EN  +Y++  + +  V  I+NKVVKIAELQ++F+EK+L+QK DIDLV  +A++ +EN+KD NEELRKAIQN+ASIR  + +     +F L
Sbjct:   12 LSDISRRPGIEPLDKDRILKPRKPPHTFSVQARSILGDINKVDRFLKEE-------------NMSDLSSEERDEIENGALSLLRTTKLLITKLKKDVDNTSNIGSQVKTH----------FLGDVSKNFTKQKEIRLESMGMTREMSRLH----------------------------DGSSLFSPD-----------------PHNNETGYAEDEEYLEEELSPDEIQLFQKENXTMYEELRKTQTEVQSIENKVVKIAELQELFSEKILEQKDDIDLVSRNALAASENIKDGNEELRKAIQNKASIRNLLTYLNYNGTFKL 266          
BLAST of syntaxin-18 isoform x1 vs. SwissProt
Match: gi|82226253|sp|Q4VBI7.1|STX18_DANRE (RecName: Full=Syntaxin-18)

HSP 1 Score: 213.001 bits (541), Expect = 1.400e-65
Identity = 127/347 (36.60%), Postives = 201/347 (57.93%), Query Frame = 0
Query:    9 DRTTQFQAAVERLERADPLLGVA-SGGRDPQRILRRVSLRGGLEPLESLARDIVANTTRLKEFLLDHRSDYVDVVRAAWSGQCGLTHQQKDHIDAGANRFIRTCQGLITKFQRDLDQSSALSGERRSHLAAVGQILAGYLKAVCRIYAQQQAIRVQRELEFQKLARLEIKARKSSESQPRDSRRLESDLLSRLGHSSSSSMDSSDEEATSESSPKRRKSEDIPLTASSNYPEEEEEV-SELTPDEIQMFEQENAQLYQDFMQVKDSVHQIQNKVVKIAELQDVFTEKVLQQKGDIDLVHHHAVSTTENVKDANEELRKAIQNQASIRVYILFFLLMMSFSLLFLDWY 353
            D T  F+A+V+ ++  +  LG+  + GR+     +R   R   +     AR++++N ++LK+FLL HR DYV+      S    +T  ++D ID  A  F+RTC   I++ + ++D+   +S + + H AAV  ++  YLK VC++Y++Q+A+RV+R ++ ++L+RLE          P                          E+  +E      +  D P++  +    EE  V  +L+P+EIQMFEQEN +L  +   + D V QI+ KVV+I+ LQ++F+EKVLQQ+ +ID +H   V  TENVK+ NE++R+AI+N A  RV+ILFFL+M SFSLLFLDWY
Sbjct:    4 DITLLFKASVKTVKTRNKALGLMETTGREEPGAQKRPRPRQR-DSFSCKAREVISNISKLKDFLLQHRKDYVNAGSVMSSEVSRMTDSERDQIDQDAQIFMRTCAEAISQLRSEMDKKQ-VSMQVKDHRAAVLDLIDSYLKGVCKLYSEQRAVRVKRVVDKKRLSRLE----------P--------------------------EQINTEKRQSDGEENDKPVSDGNVDLWEENRVEDDLSPEEIQMFEQENQRLVGEMNSLLDEVRQIEGKVVEISRLQEIFSEKVLQQETEIDSIHQLVVGATENVKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWY 312          
BLAST of syntaxin-18 isoform x1 vs. SwissProt
Match: gi|17369347|sp|Q9P2W9.1|STX18_HUMAN (RecName: Full=Syntaxin-18; AltName: Full=Cell growth-inhibiting gene 9 protein)

HSP 1 Score: 209.92 bits (533), Expect = 4.427e-64
Identity = 121/303 (39.93%), Postives = 184/303 (60.73%), Query Frame = 0
Query:   55 SLARDIVANTTRLKEFLLDHRSDYVDVVRAAWSGQCGLTHQQKDHIDAGANRFIRTCQGLITKFQRDLDQSSALSGERRSHLAAVGQILAGYLKAVCRIYAQQQAIRVQRELEFQKLARLE----IKARKSSESQPRDSRRLESDLLSRLGHSSSSSMDSSDEEATSESSPKRRKSEDIPLTASSNYPEEEEEVSELTPDEIQMFEQENAQLYQDFMQVKDSVHQIQNKVVKIAELQDVFTEKVLQQKGDIDLVHHHAVSTTENVKDANEELRKAIQNQASIRVYILFFLLMMSFSLLFLDWY 353
            S AR+++++  +L++FLL+HR DY++      S    +T  ++D ID  A  F+RTC   I +  R        S + + H  AV   +  YLK VC++Y++Q+AIRV+R ++ ++L++LE     K R+S+ S+                 S S S DS +  AT E  P++  +E  P   +    + E+E   L+P+EIQMFEQEN +L  +   + D V QI+ +VV+I+ LQ++FTEKVLQQ+ +ID +H   V  TEN+K+ NE++R+AI+N A  RV+ILFFL+M SFSLLFLDWY
Sbjct:   51 SRAREVISHIGKLRDFLLEHRKDYINAYSHTMSEYGRMTDTERDQIDQDAQIFMRTCSEAIQQL-RTEAHKEIHSQQVKEHRTAVLDFIEDYLKRVCKLYSEQRAIRVKRVVDKKRLSKLEPEPNTKTRESTSSEKV---------------SQSPSKDSEENPATEER-PEKILAETQPELGTWGDGKGEDE---LSPEEIQMFEQENQRLIGEMNSLFDEVRQIEGRVVEISRLQEIFTEKVLQQEAEIDSIHQLVVGATENIKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWY 333          
BLAST of syntaxin-18 isoform x1 vs. SwissProt
Match: gi|67462025|sp|Q5REB4.1|STX18_PONAB (RecName: Full=Syntaxin-18)

HSP 1 Score: 209.92 bits (533), Expect = 4.571e-64
Identity = 121/303 (39.93%), Postives = 184/303 (60.73%), Query Frame = 0
Query:   55 SLARDIVANTTRLKEFLLDHRSDYVDVVRAAWSGQCGLTHQQKDHIDAGANRFIRTCQGLITKFQRDLDQSSALSGERRSHLAAVGQILAGYLKAVCRIYAQQQAIRVQRELEFQKLARLE----IKARKSSESQPRDSRRLESDLLSRLGHSSSSSMDSSDEEATSESSPKRRKSEDIPLTASSNYPEEEEEVSELTPDEIQMFEQENAQLYQDFMQVKDSVHQIQNKVVKIAELQDVFTEKVLQQKGDIDLVHHHAVSTTENVKDANEELRKAIQNQASIRVYILFFLLMMSFSLLFLDWY 353
            S AR+++++  +L++FLL+HR DY++      S    +T  ++D ID  A  F+RTC   I +  R        S + + H  AV   +  YLK VC++Y++Q+AIRV+R ++ ++L++LE     K R+S+ S+                 S S S DS +  AT E  P++  +E  P   +    + E+E   L+P+EIQMFEQEN +L  +   + D V QI+ +VV+I+ LQ++FTEKVLQQ+ +ID +H   V  TEN+K+ NE++R+AI+N A  RV+ILFFL+M SFSLLFLDWY
Sbjct:   51 SRAREVISHIGKLRDFLLEHRKDYINAYSHTMSEYGRMTDTERDQIDQDAQIFMRTCSEAIQQL-RTEAHKEIHSQQVKEHRTAVLDFIEDYLKRVCKLYSEQRAIRVKRVVDKKRLSKLEPEPNTKTRESTSSEKV---------------SRSPSKDSEENPATEER-PEKILAETQPELGTWGDGKGEDE---LSPEEIQMFEQENQRLIGEMNSLFDEVRQIEGRVVEISRLQEIFTEKVLQQEAEIDSIHQLVVGATENIKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWY 333          
BLAST of syntaxin-18 isoform x1 vs. SwissProt
Match: gi|67461733|sp|Q68FW4.1|STX18_RAT (RecName: Full=Syntaxin-18)

HSP 1 Score: 208.379 bits (529), Expect = 1.595e-63
Identity = 115/299 (38.46%), Postives = 185/299 (61.87%), Query Frame = 0
Query:   55 SLARDIVANTTRLKEFLLDHRSDYVDVVRAAWSGQCGLTHQQKDHIDAGANRFIRTCQGLITKFQRDLDQSSALSGERRSHLAAVGQILAGYLKAVCRIYAQQQAIRVQRELEFQKLARLEIKARKSSESQPRDSRRLESDLLSRLGHSSSSSMDSSDEEATSESSPKRRKSEDIPLTASSNYPEEEEEVSELTPDEIQMFEQENAQLYQDFMQVKDSVHQIQNKVVKIAELQDVFTEKVLQQKGDIDLVHHHAVSTTENVKDANEELRKAIQNQASIRVYILFFLLMMSFSLLFLDWY 353
            S AR+++++  +L++FLL+HR +Y++      S    +T  ++D ID  A  F+RTC+  I + + +       S + + H  AV   +  YLK VC++Y++Q+AIRV+R ++ ++L++LE         +P   R+  +        SS ++   S+E+  +E  P++  +E  P   +    + E+E   L+P+EIQMFEQEN +L  +   + D V QI+ KVV+I+ LQ++FTEKVLQQ+ +ID +H   V  TEN+K+ NE++R+AI+N A  RV+ILFFL+M SFSLLFLDWY
Sbjct:   51 SRAREVISHIGKLRDFLLEHRKEYINAYSHTMSEYGRMTDTERDQIDQDAQIFMRTCKDAIQQLRTEA-HKEIHSQQVKEHRTAVLDFVEDYLKRVCKLYSEQRAIRVKRVVDKKRLSKLE--------PEPHTKRKEPAS-----EKSSHNASQDSEEKPAAEDLPEKPLAESQPELGTWGDGKGEDE---LSPEEIQMFEQENQRLIGEMNSLFDEVRQIEGKVVEISRLQEIFTEKVLQQETEIDSIHQLVVGATENIKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWY 332          
BLAST of syntaxin-18 isoform x1 vs. SwissProt
Match: gi|93141319|sp|Q8VDS8.2|STX18_MOUSE (RecName: Full=Syntaxin-18)

HSP 1 Score: 204.527 bits (519), Expect = 4.541e-62
Identity = 116/299 (38.80%), Postives = 183/299 (61.20%), Query Frame = 0
Query:   55 SLARDIVANTTRLKEFLLDHRSDYVDVVRAAWSGQCGLTHQQKDHIDAGANRFIRTCQGLITKFQRDLDQSSALSGERRSHLAAVGQILAGYLKAVCRIYAQQQAIRVQRELEFQKLARLEIKARKSSESQPRDSRRLESDLLSRLGHSSSSSMDSSDEEATSESSPKRRKSEDIPLTASSNYPEEEEEVSELTPDEIQMFEQENAQLYQDFMQVKDSVHQIQNKVVKIAELQDVFTEKVLQQKGDIDLVHHHAVSTTENVKDANEELRKAIQNQASIRVYILFFLLMMSFSLLFLDWY 353
            S AR+++++  +L++FLL+HR +Y++      S    +T  ++D ID  A  FIRTC   I + + +       S + + H  AV   +  YLK VC++Y++Q+AIRV+R ++ ++L++LE         +P   R+   D  S     ++S    S+ +  +E  P++  +E  P   +    + E+E   L+P+EIQMFEQEN +L  +   + D V QI+ KVV+I+ LQ++FTEKVLQQ+ +ID +H   V  TEN+K+ NE++R+AI+N A  RV+ILFFL+M SFSLLFLDWY
Sbjct:   51 SRAREVISHIGKLRDFLLEHRKEYINAYSHTMSDYGRMTDTERDQIDQDAQIFIRTCSEAIHQLRTEA-HKEIHSQQVKEHRTAVLDFVDDYLKRVCKLYSEQRAIRVKRVVDKKRLSKLE--------PEPHTKRK---DSTSEKAPQNASQ--DSEGKPAAEELPEKPLAESQPELGTWGDGKGEDE---LSPEEIQMFEQENQRLIGEMNSLFDEVRQIEGKVVEISRLQEIFTEKVLQQETEIDSIHQLVVGATENIKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWY 332          
BLAST of syntaxin-18 isoform x1 vs. SwissProt
Match: gi|148887020|sp|P59277.2|SYP81_ARATH (RecName: Full=Syntaxin-81; Short=AtSYP81)

HSP 1 Score: 71.633 bits (174), Expect = 8.077e-13
Identity = 85/325 (26.15%), Postives = 131/325 (40.31%), Query Frame = 0
Query:   52 PLESLARDIVANTTRLKEFLLDHRSDYVDVVRAAWSGQCGLTHQQKDHIDAGANRFIRTCQG----LITKFQRDLDQSSALSG--------ERRSHLAAVGQILAGYLKAVCRIYAQQQAIRVQRELEFQKLARLEIKARKSSESQPRDSRRLESDLLSRLGHSSSSSMDSSDEEATSESSPKRRKSEDIPLTASSNYPEEEEEVSELTPDEI----------QMFEQENAQLYQDFMQVKDSVHQIQNKVVKIAELQDVFTEKVLQQKGDIDLVHHHAVSTTENVKDANEELRKAIQNQASIRVYILFFLLMMSFSLLFLDWYS 354
            P    A   + +   L+ F+L HR DYVD+ R         T Q+KD I+     FI+ C+     LI   + +   S    G        +  +H   V  IL+  L +V   + Q +A R Q                               D+++R               A     PKR   E  P+  +    E  E      PDEI          Q+ + E   L  +   + D   Q + K+V+++ L  +    VLQQ   I+ ++  AV  T+NV+  N+EL +AIQ  +S R ++L F  +++FS+LFLDWYS
Sbjct:   46 PFTKAAFKTLDSIKELELFMLKHRKDYVDLHRT--------TEQEKDSIEQEVAAFIKACKEQIDILINSIRNEEANSKGWLGLPADNFNADSIAHKHGVVLILSEKLHSVTAQFDQLRATRFQ-------------------------------DIINR---------------AMPRRKPKRVIKEATPINTTLGNSESIE------PDEIQAQPRRLQQQQLLDDETQALQVELSNLLDGARQTETKMVEMSALNHLMATHVLQQAQQIEFLYDQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFFFVLTFSVLFLDWYS 310          
BLAST of syntaxin-18 isoform x1 vs. nr
Match: gi|1316076039|ref|XP_005798007.2| (syntaxin-18 [Xiphophorus maculatus])

HSP 1 Score: 226.868 bits (577), Expect = 3.275e-68
Identity = 133/347 (38.33%), Postives = 206/347 (59.37%), Query Frame = 0
Query:    9 DRTTQFQAAVERLERADPLLGV-ASGGRDPQRILRRVSLRGGLEPLESL-ARDIVANTTRLKEFLLDHRSDYVDVVRAAWSGQCGLTHQQKDHIDAGANRFIRTCQGLITKFQRDLDQSSALSGERRSHLAAVGQILAGYLKAVCRIYAQQQAIRVQRELEFQKLARLEIKARKSSESQPRDSRRLESDLLSRLGHSSSSSMDSSDEEATSESSPKRRKSEDIPLTASSNYPEEEEEVSELTPDEIQMFEQENAQLYQDFMQVKDSVHQIQNKVVKIAELQDVFTEKVLQQKGDIDLVHHHAVSTTENVKDANEELRKAIQNQASIRVYILFFLLMMSFSLLFLDWY 353
            D T  F+A+V+ ++  +  +GV     +D   I ++   + G     SL A++++ N T+LK+FLL HR DYV       +    +T  ++D ID  A  F+RTC   I + + ++++  A S + + H  AV  ++  YLK VC++Y++Q+AIRV+R ++ ++L+RL           P    ++E  ++           + ++E+   E SP++  SE     +SSN  EE     EL+P+EIQMFEQEN +L  +   + D V QI+ KVV+I+ LQ++F EKVLQQ+ DID +H   V  TENVK+ NE++R+AI+N A  RV+ILFFL+M SFSLLFLDWY
Sbjct:   20 DITLLFKASVKTVKTRNKAIGVNVDSAKD--EIFKKSRPKSGF----SLRAKEVITNITKLKDFLLQHRKDYVSAGSLISTDLSRMTDSERDQIDQDAQTFMRTCSEAIKQLRSEVEKQ-ATSAQIKEHRVAVLDLIDMYLKGVCKLYSEQRAIRVKRMVDKKRLSRL----------APEHPGKVEKTVVE----------EPAEEKVVKEESPEKNTSE--VQDSSSNLWEEGRVEDELSPEEIQMFEQENLKLVSEMSNLVDEVRQIEGKVVEISRLQEIFAEKVLQQESDIDNIHQLVVGATENVKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWY 337          
BLAST of syntaxin-18 isoform x1 vs. nr
Match: gi|542153900|ref|XP_005485810.1| (PREDICTED: syntaxin-18 [Zonotrichia albicollis])

HSP 1 Score: 226.868 bits (577), Expect = 3.434e-68
Identity = 138/350 (39.43%), Postives = 213/350 (60.86%), Query Frame = 0
Query:    9 DRTTQFQAAVERLERADPLLGVASGGRDPQR--ILRRVSLRGGLEPLESLARDIVANTTRLKEFLLDHRSDYVDVVRAAWSGQCGLTHQQKDHIDAGANRFIRTCQGLITKFQRDLDQSSALSGERRSHLAAVGQILAGYLKAVCRIYAQQQAIRVQRELEFQKLARLEIKARKSSESQPRDSRRLESDLLSRLGHSSSSSMDSSDEEATSESSPKRRKSEDIPLTASSN---YPEEEEEVSELTPDEIQMFEQENAQLYQDFMQVKDSVHQIQNKVVKIAELQDVFTEKVLQQKGDIDLVHHHAVSTTENVKDANEELRKAIQNQASIRVYILFFLLMMSFSLLFLDWY 353
            D T  F+A+V+ ++  +  LGVA  G D  R  +L+R + R       S AR+++++  +LK+FLL HR DY++      S    +T  ++D ID  A  F+RTC   I + + +       S + + H  AV   +  YLK VC++Y++Q+AIRV+R ++ ++L++LE +    S+S P  + +           SS S+++ S+E+ ++E S  R    ++P  A SN   + +   E  EL+P+EIQMFEQEN +L  +   + D V QI+ KVV+I+ LQ++FTEKVLQQ+ DID +H   V  TEN+K+ NE++R+AI+N A  RV+ILFFL+M SFSLLFLDWY
Sbjct:    4 DITLLFKASVKTVKTRNKALGVAVAG-DSARDELLKRGTARSK-SDFTSRAREVISHIGKLKDFLLQHRKDYINAYSHVMSEYVRMTDTERDQIDQDAQVFMRTCADAIHQLRTEA-HKGVQSAQVKEHRTAVLDFIEDYLKRVCKLYSEQRAIRVKRVIDKKRLSKLEPEQSNVSKS-PLSAEK-----------SSQSALEDSEEKLSAEESKDR----NLP-NAQSNLGLWGDSRGE-DELSPEEIQMFEQENQRLVGEMNNLFDEVRQIEGKVVEISRLQEIFTEKVLQQETDIDNIHQLVVGATENIKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWY 332          
BLAST of syntaxin-18 isoform x1 vs. nr
Match: gi|62132943|gb|AAH92152.1| (Unknown (protein for IMAGE:6949850), partial [Xenopus laevis])

HSP 1 Score: 226.483 bits (576), Expect = 3.457e-68
Identity = 134/346 (38.73%), Postives = 207/346 (59.83%), Query Frame = 0
Query:    9 DRTTQFQAAVERLERADPLLGVASGGRDPQRILRRVSLRGGLEPLESLARDIVANTTRLKEFLLDHRSDYVDVVRAAWSGQCGLTHQQKDHIDAGANRFIRTCQGLITKFQRDLDQSSALSGERRSHLAAVGQILAGYLKAVCRIYAQQQAIRVQRELEFQKLARLEI-KARKSSESQPRDSRRLESDLLSRLGHSSSSSMDSSDEEATSESSPKRRKSEDIPLTASSNYPEEEEEVSELTPDEIQMFEQENAQLYQDFMQVKDSVHQIQNKVVKIAELQDVFTEKVLQQKGDIDLVHHHAVSTTENVKDANEELRKAIQNQASIRVYILFFLLMMSFSLLFLDWY 353
            D T  F+A+V+ ++  +  LGV+    D   +LR+   RG        AR+++ N  +LK+FLL+HR DY++      S    +T  ++D ID  A  F+RTC   I + + +  + S  S + + H  AV   +  YLK VC++Y++Q+AIRV+R ++ ++L+RLE  K  K+  S+  DS  L+          + +   S+D+E    ++P+R          +S+  ++     EL+P+EIQMFEQEN +L  +   + D V QI+ KVV+I+ LQ++FTEKVLQQ+ DID +H   V  TEN+K+ NE++R+AI+N A  RV+ILFFL+M SFSLLFLDWY
Sbjct:    3 DITLLFRASVKTVKTRNKALGVSLPETD---LLRKRLPRG---EFSGKAREVIINIGKLKDFLLEHRKDYINACSHVVSEYSCMTDTERDQIDQDAQIFMRTCSDAIQQLRTEAGKESH-SLQIKEHRNAVLDFIEDYLKRVCKLYSEQRAIRVKRTVDKKRLSRLEPEKINKTQSSRSEDSVPLKQ-------LDTGAEKKSADDENIDRTAPER--------NGTSSLWDDGRSEDELSPEEIQMFEQENQRLVSEMNSLFDEVRQIEGKVVEISRLQEIFTEKVLQQETDIDNIHELVVGATENIKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWY 326          
BLAST of syntaxin-18 isoform x1 vs. nr
Match: gi|1003775994|ref|XP_015718188.1| (PREDICTED: syntaxin-18 [Coturnix japonica])

HSP 1 Score: 226.483 bits (576), Expect = 3.795e-68
Identity = 137/352 (38.92%), Postives = 211/352 (59.94%), Query Frame = 0
Query:    9 DRTTQFQAAVERLERADPLLGVASGGRDPQRILRRVSLRGGLEPLESLARDIVANTTRLKEFLLDHRSDYVDVVRAAWSGQCGLTHQQKDHIDAGANRFIRTCQGLI----TKFQRDLDQSSALSGERRSHLAAVGQILAGYLKAVCRIYAQQQAIRVQRELEFQKLARLEIKARKSSESQPRDSRRLESDLLSRLGHSSSSSMDSSDEEATSESSPKRRKSEDIPLTASSN---YPEEEEEVSELTPDEIQMFEQENAQLYQDFMQVKDSVHQIQNKVVKIAELQDVFTEKVLQQKGDIDLVHHHAVSTTENVKDANEELRKAIQNQASIRVYILFFLLMMSFSLLFLDWY 353
            D T  F+A+V+ ++  +  LGVA+G      +L+R + R         AR++++N  +LK+FLL HR DY++      S    +T  ++D ID  A  F+RTC   I    T+  +D+      S + + H  AV   +  YLK VC++Y++Q+AIRV+R ++ ++L++LE +    S+S     +             S SS+D S+E+ ++E +  R    ++P  A SN   + + + E  EL+P+EIQMFEQEN +L  +   + D V QI+ KVV+I+ LQ++FTEKVLQQ+ DID +H   V  TEN+K+ NE++R+AI+N A  RV+ILFFL+M SFSLLFLDWY
Sbjct:    4 DITLLFKASVKTVKTRNKALGVAAGDSARDELLKRSAARSR-SDFTGRAREVISNIGKLKDFLLQHRKDYINAYSHIMSEYGRMTDTERDQIDQDAQIFMRTCADAIHQLRTEAHKDIQ-----SAQVKEHRTAVLDFIEDYLKRVCKLYSEQRAIRVKRVIDKKRLSKLEPEQSNVSKSALSPEK------------ISQSSLDESEEKLSAEENKDR----NLP-DAQSNLGLWGDGKGE-DELSPEEIQMFEQENQRLVGEMNNLFDEVRQIEGKVVEISRLQEIFTEKVLQQETDIDNIHQLVVGATENIKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFLDWY 331          
BLAST of syntaxin-18 isoform x1 vs. nr
Match: gi|1344803036|ref|XP_023944083.1| (syntaxin-18 [Bicyclus anynana])

HSP 1 Score: 226.098 bits (575), Expect = 4.231e-68
Identity = 131/350 (37.43%), Postives = 207/350 (59.14%), Query Frame = 0
Query:    9 DRTTQFQAAVERLERADPLLGVASGGRD-PQRILRRVSLRGGLEPLESLARDIVANTTRLKEFLLDHRSDYVDVVRAAWSGQCGLTHQQKDHIDAGANRFIRTCQGLITKFQRDLDQSSALSGERRSHLAAVGQILAGYLKAVCRIYAQQQAIRVQRELEFQKLARLEIKARKSSESQP--RDSRRLESDLLSRLGHSSSSSMDSSDEEATSESSPKRRKSEDIPLTASSNYPEEEEEVSELTPDEIQMFEQENAQLYQDFMQVKDSVHQIQNKVVKIAELQDVFTEKVLQQKGDIDLVHHHAVSTTENVKDANEELRKAIQNQASIRVYILFFLLMMSFSLLFLDWYSE 355
            D T  F+A ++ ++  +   G+ S   D  QRILR     G +    + ARDI +  T+L++FLL+HR  Y+         +  ++  ++D ID GA R I TC  L+ +F+ D ++   LS + R  + AV  ++  YLK+VC+I+++ +A+RV+R L+ +KL+RLE+   KS+   P  +++   E ++ +    ++ S +D S+ E    S                          EL+ +E+QMFE EN QL  +   + D V QI++KV+ IAELQ++FTEK+LQQ+ DID + +  V TTE +KDANE++++AIQ  A +RVY+LFFLL+MSF+LLFLDWY+E
Sbjct:    2 DITPLFKACIKTVKTRNKAFGIHSPTNDDKQRILRSKPKTGFM----ATARDITSQITKLRDFLLEHRERYLSFYNDVTGDE--MSEAERDQIDTGAQRIINTCCHLLKEFRND-NRKVPLSLQTRDFMDAVIDLIDSYLKSVCKIHSELKALRVKRALDIRKLSRLELPQTKSNIPNPFIQENAPKEENVGTEEVDNTKSKLDLSENEVAVLSDE-----------------------GELSAEELQMFESENVQLLNELNSMTDEVRQIESKVLHIAELQEIFTEKILQQEQDIDRIANTVVGTTETMKDANEQIKQAIQRNAGLRVYVLFFLLVMSFTLLFLDWYNE 321          
The following BLAST results are available for this feature:
BLAST of syntaxin-18 isoform x1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000009431.331e-3630.03supercontig:LSalAtl2s:LSalAtl2s1166:162994:164031:... [more]
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BLAST of syntaxin-18 isoform x1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
gi|82226253|sp|Q4VBI7.1|STX18_DANRE1.400e-6536.60RecName: Full=Syntaxin-18[more]
gi|17369347|sp|Q9P2W9.1|STX18_HUMAN4.427e-6439.93RecName: Full=Syntaxin-18; AltName: Full=Cell grow... [more]
gi|67462025|sp|Q5REB4.1|STX18_PONAB4.571e-6439.93RecName: Full=Syntaxin-18[more]
gi|67461733|sp|Q68FW4.1|STX18_RAT1.595e-6338.46RecName: Full=Syntaxin-18[more]
gi|93141319|sp|Q8VDS8.2|STX18_MOUSE4.541e-6238.80RecName: Full=Syntaxin-18[more]
gi|148887020|sp|P59277.2|SYP81_ARATH8.077e-1326.15RecName: Full=Syntaxin-81; Short=AtSYP81[more]
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BLAST of syntaxin-18 isoform x1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1316076039|ref|XP_005798007.2|3.275e-6838.33syntaxin-18 [Xiphophorus maculatus][more]
gi|542153900|ref|XP_005485810.1|3.434e-6839.43PREDICTED: syntaxin-18 [Zonotrichia albicollis][more]
gi|62132943|gb|AAH92152.1|3.457e-6838.73Unknown (protein for IMAGE:6949850), partial [Xeno... [more]
gi|1003775994|ref|XP_015718188.1|3.795e-6838.92PREDICTED: syntaxin-18 [Coturnix japonica][more]
gi|1344803036|ref|XP_023944083.1|4.231e-6837.43syntaxin-18 [Bicyclus anynana][more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold156_size297567supercontigscaffold156_size297567:74228..75768 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold156_size297567-snap-gene-0.20-mRNA-1maker-scaffold156_size297567-snap-gene-0.20-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold156_size297567:74228..75768+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold156_size297567-snap-gene-0.20 ID=maker-scaffold156_size297567-snap-gene-0.20|Name=syntaxin-18 isoform x1|organism=Tigriopus kingsejongensis|type=gene|length=1541bp|location=Sequence derived from alignment at scaffold156_size297567:74228..75768+ (Tigriopus kingsejongensis)
TCTCAATCGGTCACCTTCTTTGTTGACATGGACTTCTGCCTCGCTTCGGG CAAAGCGCTTTGGCTTCGTGGAGGACAAGAACTCAGGCGGACAAGATTCC CTCGACCCAAATTTCGGGACCGGATTCTTCACCCGTTGGAGCGGACTAGG TTGGCGCTGGCTCGCGGAGCATGCGGCACAAAGTCCGATGTCGGGATCGG ACCACCCAGTTCCAAGCGGCGGTGGAGCGGCTCGAGCGGGCCGATCCGCT CTTGGGCGTGGCCAGTGGCGGGCGTGACCCGCAGCGCATTCTGCGGCGTG TCAGTCTACGGGGTGGACTCGAGCCGCTCGAGTCGCTGGCCCGGGACATC GTGGCCAATACGACGCGGCTCAAGGAGTTCCTGCTGGATCACCGCTCAGA CTACGTGGACGTGGTGCGGGCCGCTTGGAGCGGCCAATGCGGATTAACCC ACCAGCAGAAGGACCACATTGATGCCGGTAGACTCAATGCCCCGGGAAGG ACCCGTAGCTGAGCTGAATGCCCGCCCTAACTCACTTTTTTTCAGGCGCC AACCGCTTCATCCGGACCTGCCAGGGCCTGATTACCAAGTTTCAGCGCGA CTTGGACCAATCCTCGGCCTTGAGCGGCGAACGTCGCTCCCATTTGGCGG CCGTGGGCCAGATCCTGGCGGGCTACTTGAAGGCCGTCTGCCGGATCTAC GCCCAGCAGCAAGCCATCCGGGTCCAGCGTGAGCTCGAGTTTCAGAAGCT CGCGCGCCTCGAGATTAAGGCCCGCAAAAGTGAGTCCGCCCACCGTCGGA CCTCTGGGTCGCTCCCATGTACGAGTGAATCTCCCATCGTCTAGCGGGAC TCGGGATGGAGTCAAACTCAGGATAGTCTGGAATTGTCCAATCCCATCGT AGTTTCGGCTCATCGTAGCCGAGGACAATAGCTCATGACCTAAACCTGGG CCAGCAGGGGACCGAAGATGTCCGTAGTGGCCAAAACGTACTAACGTGCT GTTTTTTTGTCCAGGTAGCGAAAGTCAGCCGAGGGACAGCCGGAGGCTGG AAAGCGACCTTTTGTCACGACTCGGCCATTCATCCTCGTCCTCGATGGAC AGCTCGGACGAAGAGGCAACTTCCGAGAGCTCCCCCAAGCGTCGAAAGTC GGAGGACATTCCCCTCACGGCGTCTAGTAATTACCCGGAGGAGGAGGAAG AGGTCAGCGAGCTCACTCCGGACGAAATTCAGATGTTTGAGCAAGAGAAT GCCCAACTTTACCAGGATTTCATGCAAGTCAAAGATAGTGTGCATCAGAT CCAGAACAAGGTGGTCAAAATTGCCGAACTGCAGGACGTGTTCACGGAGA AAGTTCTCCAGCAGAAGGGCGACATCGATCTGGTGCATCACCATGCCGTG TCGACGACGGAAAATGTGAAGGATGCCAACGAGGAGCTGCGCAAGGCCAT CCAGAACCAGGCCTCCATTCGGGTGTACATCCTCTTCTTCCTCCTCATGA TGTCCTTCTCGCTTTTATTCCTCGACTGGTACAGCGAATGA
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Synonyms
The feature 'syntaxin-18 isoform x1' has the following synonyms
Synonym
Tk07662
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