longitudinals lacking isoform g, maker-scaffold170_size291898-snap-gene-1.57 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000002455 (supercontig:LSalAtl2s:LSalAtl2s1471:52173:56863:1 gene:EMLSAG00000002455 transcript:EMLSAT00000002455 description:"maker-LSalAtl2s1471-snap-gene-0.12") HSP 1 Score: 139.043 bits (349), Expect = 1.086e-34 Identity = 59/119 (49.58%), Postives = 86/119 (72.27%), Query Frame = 0 Query: 40 TGGPSGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 +G Q+Y L+WN+H ++SVF +L N + VDVTLA EG ++AHKMVLSACS YFQS+ TP +HPIV L+DV++ ++K +++FMY+G V V + +S ++K A+ L+IKGL E Sbjct: 2 SGNQQPQQYCLRWNNHQHNLLSVFEDLLNHEAFVDVTLAVEGLQLKAHKMVLSACSPYFQSMLYNTPDRHPIVFLRDVRYSEMKALLEFMYRGEVSVDQENLSSLLKVAEGLKIKGLAE 120
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000001548 (supercontig:LSalAtl2s:LSalAtl2s126:209647:210033:1 gene:EMLSAG00000001548 transcript:EMLSAT00000001548 description:"augustus_masked-LSalAtl2s126-processed-gene-2.5") HSP 1 Score: 126.331 bits (316), Expect = 2.832e-34 Identity = 59/117 (50.43%), Postives = 81/117 (69.23%), Query Frame = 0 Query: 42 GPSGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 G Q++ L+WND T MVS F +L + S DVTLA +G+ +AHKMVLSACS YF++L P +HPI+ILKDV F+ L I++FMY G V V+ D++ +KTA+ L++KGL E Sbjct: 4 GGDQQQFCLRWNDFQTNMVSSFKHLRDEKSFTDVTLACDGQTCKAHKMVLSACSPYFKALLEENPAKHPIIILKDVPFQHLTAILEFMYAGEVNVAQDQLPAFLKTAERLKVKGLAE 120
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000006827 (supercontig:LSalAtl2s:LSalAtl2s385:122699:145346:1 gene:EMLSAG00000006827 transcript:EMLSAT00000006827 description:"maker-LSalAtl2s385-augustus-gene-1.13") HSP 1 Score: 132.494 bits (332), Expect = 6.785e-33 Identity = 55/116 (47.41%), Postives = 84/116 (72.41%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEK 159 + +++ L+WN++ + +VS NL VDVTL+ EG+ I+AHK++LSACS YF+ +F TP HPI+ILKD Q+ DL+++V+++YQG +S + +S +KTAD LQIKGL E+ Sbjct: 2 TSEQFCLKWNNYQSNIVSALGNLKLDEDFVDVTLSCEGRTIKAHKVILSACSLYFRDVFRETPCNHPIIILKDTQYSDLESLVKYVYQGQXYISQENLSSFLKTADALQIKGLAEQ 117
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000009541 (supercontig:LSalAtl2s:LSalAtl2s613:57802:64681:-1 gene:EMLSAG00000009541 transcript:EMLSAT00000009541 description:"maker-LSalAtl2s613-snap-gene-0.15") HSP 1 Score: 129.413 bits (324), Expect = 2.246e-32 Identity = 54/113 (47.79%), Postives = 82/113 (72.57%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 Q+Y L+WN+H T ++ VF L S DV LAAEG+ ++ HK+VLSACS YF+ LFS+ ++ IVILKD +F+DL I++FMY+G + + +++S ++KTA+ L++KGL E Sbjct: 11 QQYCLKWNNHQTNLLKVFNRLLGSEQFTDVLLAAEGRTLRGHKVVLSACSSYFEQLFSSFNEKNQIVILKDTKFDDLAAIIEFMYKGEISIIQEQLSSLLKTAENLKVKGLAE 123
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000011119 (supercontig:LSalAtl2s:LSalAtl2s753:172698:206363:1 gene:EMLSAG00000011119 transcript:EMLSAT00000011119 description:"augustus_masked-LSalAtl2s753-processed-gene-1.0") HSP 1 Score: 118.627 bits (296), Expect = 7.438e-31 Identity = 52/118 (44.07%), Postives = 80/118 (67.80%), Query Frame = 0 Query: 45 GQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTE 162 G + L+W+ + +V+ F +L VDVTLA + AHK+VLSACS YF+ L + P HPI+IL+DV D++++++FMY G V++S D+I D +KTA+ LQI+GL E+F++ Sbjct: 40 GGKLRLKWDQYPQSLVNSFRDLKEEEDFVDVTLACNSQQFNAHKVVLSACSPYFRKLLKSNPCHHPIIILRDVVEIDIESLLKFMYNGEVQISEDRIKDFLKTAESLQIRGLAEQFSK 157
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000007481 (supercontig:LSalAtl2s:LSalAtl2s42:537429:544881:1 gene:EMLSAG00000007481 transcript:EMLSAT00000007481 description:"maker-LSalAtl2s42-augustus-gene-5.9") HSP 1 Score: 125.946 bits (315), Expect = 1.069e-30 Identity = 52/113 (46.02%), Postives = 81/113 (71.68%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 Q++ L+WN+H + ++SVF L SLVDVTL AEG+ ++AHK++LSACS YF+ +F A +HP++ +++V FE+LK +V++MY+G V + I+TA+ LQI+GL E Sbjct: 5 QQFCLKWNNHRSTILSVFDTLLEEESLVDVTLTAEGQFLRAHKVILSACSPYFRIMFRAANEKHPVIYMQNVDFENLKALVEYMYKGEANVPQHMLPSFIRTAESLQIRGLAE 117
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000004636 (supercontig:LSalAtl2s:LSalAtl2s241:1947:4259:-1 gene:EMLSAG00000004636 transcript:EMLSAT00000004636 description:"maker-LSalAtl2s241-snap-gene-0.4") HSP 1 Score: 115.161 bits (287), Expect = 3.459e-29 Identity = 50/112 (44.64%), Postives = 80/112 (71.43%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAE-GKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGL 156 Q+ L+W D+ + + +VF +L + VDVT++ E GK ++ HK+VLSACS YFQ+LF P QHPIVIL+DV++ +L I+++MY+G + V +S ++++A+ LQI+GL Sbjct: 30 QQLCLKWADYQSNLTNVFDSLLQQEAFVDVTISTEAGKSLKCHKVVLSACSAYFQNLFVENPCQHPIVILRDVEWRELCHIIEYMYKGQIHVGPGDLSPLLRSAESLQIRGL 141
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000005175 (supercontig:LSalAtl2s:LSalAtl2s273:353922:396706:-1 gene:EMLSAG00000005175 transcript:EMLSAT00000005175 description:"augustus_masked-LSalAtl2s273-processed-gene-4.4") HSP 1 Score: 118.242 bits (295), Expect = 6.533e-28 Identity = 47/63 (74.60%), Postives = 51/63 (80.95%), Query Frame = 0 Query: 682 FGHVPKGRDGPALGCNHCWNSTDGNGRILRRKTKYQCVECGVNLCIVPCFQQYHEARDRETSQ 744 FGH PK R+GPALGCN CWN+TD NGRILRRKTKY C EC NLCIVPCFQ YHEA ++E Q Sbjct: 559 FGHCPKAREGPALGCNFCWNTTDINGRILRRKTKYHCPECQANLCIVPCFQSYHEALEKEDRQ 621
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000003038 (supercontig:LSalAtl2s:LSalAtl2s1728:22097:26590:1 gene:EMLSAG00000003038 transcript:EMLSAT00000003038 description:"maker-LSalAtl2s1728-augustus-gene-0.10") HSP 1 Score: 111.694 bits (278), Expect = 4.756e-26 Identity = 47/111 (42.34%), Postives = 75/111 (67.57%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGL 156 Q Y+L+WN+H ++S F L + +LVD TL E ++AHK+VLSACS YFQ +F+ +HPI++LKD++ + + IV FMY+G V +++ +IK A+ L+++GL Sbjct: 4 QHYSLRWNNHQXHVLSAFDTLLQNEALVDCTLVCEDTSVRAHKVVLSACSPYFQKIFTDNVCKHPIIVLKDIKGWEAQCIVDFMYKGETSVPESQLTSLIKAAESLKVRGL 114
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000000011 (supercontig:LSalAtl2s:LSalAtl2s1003:80801:91923:-1 gene:EMLSAG00000000011 transcript:EMLSAT00000000011 description:"maker-LSalAtl2s1003-snap-gene-1.13") HSP 1 Score: 112.079 bits (279), Expect = 5.417e-26 Identity = 49/118 (41.53%), Postives = 78/118 (66.10%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHP-----IVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 ++Y L+W+ + T +++ F L S +L DVTL EG+ +AH++VL+ACS +F+SLFS P P VIL + +DL+ ++ FMY+G + D+I+ V+KTA++LQ+KGL E Sbjct: 34 EKYKLKWSKYETNILTAFHGLLESETLSDVTLFCEGQTFKAHRLVLAACSTHFESLFSHAPINAPTNNQFFVILDGTRADDLQILLHFMYRGEAYLHHDRINSVLKTAEVLQVKGLSE 151
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|29428068|sp|Q9W0K7.2|BAB1_DROME (RecName: Full=Protein bric-a-brac 1) HSP 1 Score: 146.362 bits (368), Expect = 6.952e-35 Identity = 72/173 (41.62%), Postives = 107/173 (61.85%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE--KFTEAANKIIEGSSRRLLSVPSQHSVNS-----RQYSTESL-----PEYFNRTSSFSP 206 Q++ L+WN++ T + ++F L + VDVTLA +G+ ++AHKMVLSACS YFQ+L + TP QHPIVI++DV + DLK IV+FMY+G + VS D+I +++ A+ML+++GL + A SS R+ S P + + S R+ E L PE RTS + P Sbjct: 100 QQFCLRWNNYQTNLTTIFDQLLQNECFVDVTLACDGRSMKAHKMVLSACSPYFQTLLAETPCQHPIVIMRDVNWSDLKAIVEFMYRGEINVSQDQIGPLLRIAEMLKVRGLADVTHMEAATAAAAAASSERMPSSPKESTSTSRTEHDREREAEELLAFMQPEKKLRTSDWDP 272
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|29428067|sp|Q9W0K4.2|BAB2_DROME (RecName: Full=Protein bric-a-brac 2) HSP 1 Score: 141.739 bits (356), Expect = 1.883e-33 Identity = 59/114 (51.75%), Postives = 85/114 (74.56%), Query Frame = 0 Query: 45 GQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 GQ++ L+WN++ + + +VF L S S VDVTL+ EG I+AHKMVLSACS YFQ+LF P QHPI+I++DV + DLK +V+FMY+G + V D+I+ ++K A+ L+I+GL E Sbjct: 195 GQQFCLRWNNYQSNLTNVFDELLQSESFVDVTLSCEGHSIKAHKMVLSACSPYFQALFYDNPCQHPIIIMRDVSWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAE 308
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|20455517|sp|P17789.2|TTKB_DROME (RecName: Full=Protein tramtrack, beta isoform; AltName: Full=Repressor protein fushi tarazu; AltName: Full=Tramtrack p69) HSP 1 Score: 138.272 bits (347), Expect = 8.482e-33 Identity = 57/113 (50.44%), Postives = 86/113 (76.11%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 QR+ L+WN+H + ++SVF L ++ + DVTLA EG+H++AHKMVLSACS YF +LF + P +HPIVILKDV + D+K+++ FMY+G V V ++++ ++ A+ L+IKGL E Sbjct: 6 QRFCLRWNNHQSNLLSVFDQLLHAETFTDVTLAVEGQHLKAHKMVLSACSPYFNTLFVSHPEKHPIVILKDVPYSDMKSLLDFMYRGEVSVDQERLTAFLRVAESLRIKGLTE 118
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|47117851|sp|P42282.3|TTKA_DROME (RecName: Full=Protein tramtrack, alpha isoform; AltName: Full=Repressor protein fushi tarazu; AltName: Full=Tramtrack p88) HSP 1 Score: 138.658 bits (348), Expect = 1.405e-32 Identity = 57/115 (49.57%), Postives = 87/115 (75.65%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 + QR+ L+WN+H + ++SVF L ++ + DVTLA EG+H++AHKMVLSACS YF +LF + P +HPIVILKDV + D+K+++ FMY+G V V ++++ ++ A+ L+IKGL E Sbjct: 4 ASQRFCLRWNNHQSNLLSVFDQLLHAETFTDVTLAVEGQHLKAHKMVLSACSPYFNTLFVSHPEKHPIVILKDVPYSDMKSLLDFMYRGEVSVDQERLTAFLRVAESLRIKGLTE 118
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|73621174|sp|Q7KRI2.1|LOLAL_DROME (RecName: Full=Longitudinals lacking protein-like; Short=Lola-like protein; AltName: Full=Protein Batman) HSP 1 Score: 125.176 bits (313), Expect = 1.794e-32 Identity = 59/115 (51.30%), Postives = 82/115 (71.30%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 S Q++ L+WND T MV+ F +L + S DVTLA EG+ +AHKMVLSACS YF++L P++HPI+ILKDV + L+ I++FMY G V VS +++ +KTAD L++KGL E Sbjct: 4 SDQQFFLKWNDFQTNMVTSFRHLRDEKSFTDVTLACEGQTCKAHKMVLSACSPYFKALLEENPSKHPIIILKDVSYIHLQAILEFMYAGEVNVSQEQLPAFLKTADRLKVKGLAE 118
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|73920870|sp|Q7KQZ4.1|LOLA3_DROME (RecName: Full=Longitudinals lacking protein, isoforms A/B/D/L) HSP 1 Score: 131.724 bits (330), Expect = 1.808e-30 Identity = 55/116 (47.41%), Postives = 86/116 (74.14%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFT 161 Q++ L+WN+H + ++SVF L + +LVD TLAAEGK ++AHK+VLSACS YF +L +HPI ILKDV++++L+ ++ +MY+G V +S D+++ ++K A+ LQIKGL + T Sbjct: 5 QQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQYDKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSDNRT 120
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|317373382|sp|P42283.2|LOLA1_DROME (RecName: Full=Longitudinals lacking protein, isoform G) HSP 1 Score: 132.109 bits (331), Expect = 2.100e-30 Identity = 55/116 (47.41%), Postives = 86/116 (74.14%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFT 161 Q++ L+WN+H + ++SVF L + +LVD TLAAEGK ++AHK+VLSACS YF +L +HPI ILKDV++++L+ ++ +MY+G V +S D+++ ++K A+ LQIKGL + T Sbjct: 5 QQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQYDKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSDNRT 120
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|73920873|sp|Q9V5M6.4|LOLA5_DROME (RecName: Full=Longitudinals lacking protein, isoforms J/P/Q/S/Z) HSP 1 Score: 131.339 bits (329), Expect = 4.104e-30 Identity = 55/116 (47.41%), Postives = 86/116 (74.14%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFT 161 Q++ L+WN+H + ++SVF L + +LVD TLAAEGK ++AHK+VLSACS YF +L +HPI ILKDV++++L+ ++ +MY+G V +S D+++ ++K A+ LQIKGL + T Sbjct: 5 QQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQYDKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSDNRT 120
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|73920872|sp|Q867Z4.1|LOLA4_DROME (RecName: Full=Longitudinals lacking protein, isoforms F/I/K/T) HSP 1 Score: 130.954 bits (328), Expect = 4.286e-30 Identity = 55/116 (47.41%), Postives = 86/116 (74.14%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFT 161 Q++ L+WN+H + ++SVF L + +LVD TLAAEGK ++AHK+VLSACS YF +L +HPI ILKDV++++L+ ++ +MY+G V +S D+++ ++K A+ LQIKGL + T Sbjct: 5 QQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQYDKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSDNRT 120
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|73920225|sp|P42284.2|LOLA2_DROME (RecName: Full=Longitudinals lacking protein, isoforms H/M/V) HSP 1 Score: 129.028 bits (323), Expect = 4.387e-30 Identity = 55/116 (47.41%), Postives = 86/116 (74.14%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFT 161 Q++ L+WN+H + ++SVF L + +LVD TLAAEGK ++AHK+VLSACS YF +L +HPI ILKDV++++L+ ++ +MY+G V +S D+++ ++K A+ LQIKGL + T Sbjct: 5 QQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQYDKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSDNRT 120
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|817199026|ref|XP_012275181.1| (protein bric-a-brac 1 isoform X1 [Orussus abietinus] >gi|817199028|ref|XP_012275182.1| protein bric-a-brac 1 isoform X1 [Orussus abietinus]) HSP 1 Score: 169.859 bits (429), Expect = 1.408e-41 Identity = 78/129 (60.47%), Postives = 98/129 (75.97%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIEGSS 172 S Q++ L+WN+H +SVF+NL N+ +LVDVTLAAEG+H+QAHK+VLSACS YFQSLF+ P QHPIVILKDV+F DLK +V FMY G V VS D++ +IKTA+ L+IKGL E T + K GSS Sbjct: 2 SMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNVSQDQLPSIIKTAESLKIKGLAEMHTASLTKWPSGSS 130 HSP 2 Score: 110.153 bits (274), Expect = 1.606e-21 Identity = 45/61 (73.77%), Postives = 50/61 (81.97%), Query Frame = 0 Query: 683 GHVPKGRDGPALGCNHCWNSTDGNGRILRRKTKYQCVECGVNLCIVPCFQQYHEARDRETS 743 GH P R GPALGCNHCWN+ DG+GRILRRKTKY C EC +NLCIVPCFQ++HE R RE S Sbjct: 437 GHCPVQRPGPALGCNHCWNTIDGHGRILRRKTKYHCPECQINLCIVPCFQEFHE-RQREVS 496
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|1183211945|ref|XP_020706345.1| (protein tramtrack, alpha isoform isoform X4 [Athalia rosae]) HSP 1 Score: 167.933 bits (424), Expect = 2.066e-41 Identity = 77/129 (59.69%), Postives = 97/129 (75.19%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIEGSS 172 S Q++ L+WN+H +SVF+NL N+ +LVDVTLAAEG+H+QAHK+VLSACS YFQSLF+ P QHP+VILKDV F DLK +V FMY G V VS D++ +IKTA+ L+IKGL E T + K GSS Sbjct: 2 SMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGQHLQAHKVVLSACSTYFQSLFTVNPCQHPVVILKDVMFSDLKIMVDFMYYGEVNVSQDQLPSIIKTAESLKIKGLAEMHTASVTKWPSGSS 130
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|952542800|gb|KRT86883.1| (BTB domain-containing protein, partial [Oryctes borbonicus]) HSP 1 Score: 163.31 bits (412), Expect = 2.438e-41 Identity = 72/113 (63.72%), Postives = 92/113 (81.42%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 Q+Y L+WN+H +SVF++L NS SLVDVTL+AEG+H+QAHK+VLSACS YFQSLF+ P QHPIVILKDV+F DLK +V FMY G V VS +++ ++KTA+ML+IKGL E Sbjct: 4 QQYCLKWNNHQPNFISVFSSLLNSESLVDVTLSAEGRHLQAHKLVLSACSSYFQSLFTINPCQHPIVILKDVKFTDLKVMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAE 116
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|817199030|ref|XP_012275183.1| (longitudinals lacking protein, isoforms H/M/V isoform X2 [Orussus abietinus]) HSP 1 Score: 168.703 bits (426), Expect = 2.520e-41 Identity = 78/130 (60.00%), Postives = 98/130 (75.38%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIEGSSR 173 S Q++ L+WN+H +SVF+NL N+ +LVDVTLAAEG+H+QAHK+VLSACS YFQSLF+ P QHPIVILKDV+F DLK +V FMY G V VS D++ +IKTA+ L+IKGL E T + K GSS Sbjct: 2 SMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNVSQDQLPSIIKTAESLKIKGLAEMHTASLTKWPSGSSE 131
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|170067501|ref|XP_001868505.1| (conserved hypothetical protein [Culex quinquefasciatus] >gi|167863629|gb|EDS27012.1| conserved hypothetical protein [Culex quinquefasciatus]) HSP 1 Score: 161.384 bits (407), Expect = 3.078e-41 Identity = 74/115 (64.35%), Postives = 94/115 (81.74%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 S Q+Y L+WN+H +SVF+ L ++ SLVDVTLAAEG+ +QAHK+VLSACS YFQSLF+A P QHPIVILKDVQ+ DLKT+V FMY G V VS++++ V+KTA+ML+IKGL E Sbjct: 2 SVQQYCLRWNNHQPNFISVFSTLLHNESLVDVTLAAEGRQLQAHKVVLSACSSYFQSLFTANPCQHPIVILKDVQYNDLKTMVDFMYYGEVNVSTEQLPQVLKTAEMLKIKGLAE 116
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|815900374|ref|XP_012236338.1| (protein tramtrack, alpha isoform isoform X1 [Bombus impatiens] >gi|815900380|ref|XP_012236341.1| protein tramtrack, alpha isoform isoform X1 [Bombus impatiens] >gi|1366073745|ref|XP_024220700.1| protein tramtrack, alpha isoform isoform X1 [Bombus impatiens]) HSP 1 Score: 169.088 bits (427), Expect = 3.088e-41 Identity = 77/129 (59.69%), Postives = 98/129 (75.97%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIEGSS 172 S Q++ L+WN+H +SVF+NL N+ +LVDVTLAAEG+H+QAHK+VLSACS YFQSLF+ P QHPIVILKDV+F DLK +V FMY G V +S D++ +IKTA+ L+IKGL E T + K GSS Sbjct: 2 SMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNISQDQLPSIIKTAESLKIKGLAEMHTASLTKWPSGSS 130 HSP 2 Score: 103.99 bits (258), Expect = 1.562e-19 Identity = 41/57 (71.93%), Postives = 43/57 (75.44%), Query Frame = 0 Query: 682 FGHVPKGRDGPALGCNHCWNSTDGNGRILRRKTKYQCVECGVNLCIVPCFQQYHEAR 738 FGH P R GPALGC HCWN+ D +GR LRRKTKY C EC NLCIVPCFQ YHE R Sbjct: 466 FGHCPVLRPGPALGCKHCWNTIDAHGRTLRRKTKYHCPECQANLCIVPCFQDYHEQR 522
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|815900382|ref|XP_012236342.1| (protein tramtrack, alpha isoform isoform X2 [Bombus impatiens]) HSP 1 Score: 169.088 bits (427), Expect = 3.189e-41 Identity = 77/129 (59.69%), Postives = 98/129 (75.97%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIEGSS 172 S Q++ L+WN+H +SVF+NL N+ +LVDVTLAAEG+H+QAHK+VLSACS YFQSLF+ P QHPIVILKDV+F DLK +V FMY G V +S D++ +IKTA+ L+IKGL E T + K GSS Sbjct: 2 SMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNISQDQLPSIIKTAESLKIKGLAEMHTASLTKWPSGSS 130 HSP 2 Score: 103.99 bits (258), Expect = 1.525e-19 Identity = 41/57 (71.93%), Postives = 43/57 (75.44%), Query Frame = 0 Query: 682 FGHVPKGRDGPALGCNHCWNSTDGNGRILRRKTKYQCVECGVNLCIVPCFQQYHEAR 738 FGH P R GPALGC HCWN+ D +GR LRRKTKY C EC NLCIVPCFQ YHE R Sbjct: 465 FGHCPVLRPGPALGCKHCWNTIDAHGRTLRRKTKYHCPECQANLCIVPCFQDYHEQR 521
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|808117995|ref|XP_012176335.1| (protein tramtrack, alpha isoform isoform X1 [Bombus terrestris] >gi|808117997|ref|XP_012176336.1| protein tramtrack, alpha isoform isoform X1 [Bombus terrestris]) HSP 1 Score: 169.088 bits (427), Expect = 3.368e-41 Identity = 77/129 (59.69%), Postives = 98/129 (75.97%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIEGSS 172 S Q++ L+WN+H +SVF+NL N+ +LVDVTLAAEG+H+QAHK+VLSACS YFQSLF+ P QHPIVILKDV+F DLK +V FMY G V +S D++ +IKTA+ L+IKGL E T + K GSS Sbjct: 2 SMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNISQDQLPSIIKTAESLKIKGLAEMHTASLTKWPSGSS 130 HSP 2 Score: 103.99 bits (258), Expect = 1.534e-19 Identity = 41/57 (71.93%), Postives = 43/57 (75.44%), Query Frame = 0 Query: 682 FGHVPKGRDGPALGCNHCWNSTDGNGRILRRKTKYQCVECGVNLCIVPCFQQYHEAR 738 FGH P R GPALGC HCWN+ D +GR LRRKTKY C EC NLCIVPCFQ YHE R Sbjct: 466 FGHCPVLRPGPALGCKHCWNTIDAHGRTLRRKTKYHCPECQANLCIVPCFQDYHEQR 522
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|808118001|ref|XP_012176338.1| (protein tramtrack, alpha isoform isoform X2 [Bombus terrestris]) HSP 1 Score: 169.088 bits (427), Expect = 3.379e-41 Identity = 77/129 (59.69%), Postives = 98/129 (75.97%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIEGSS 172 S Q++ L+WN+H +SVF+NL N+ +LVDVTLAAEG+H+QAHK+VLSACS YFQSLF+ P QHPIVILKDV+F DLK +V FMY G V +S D++ +IKTA+ L+IKGL E T + K GSS Sbjct: 2 SMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNISQDQLPSIIKTAESLKIKGLAEMHTASLTKWPSGSS 130 HSP 2 Score: 103.99 bits (258), Expect = 1.485e-19 Identity = 41/57 (71.93%), Postives = 43/57 (75.44%), Query Frame = 0 Query: 682 FGHVPKGRDGPALGCNHCWNSTDGNGRILRRKTKYQCVECGVNLCIVPCFQQYHEAR 738 FGH P R GPALGC HCWN+ D +GR LRRKTKY C EC NLCIVPCFQ YHE R Sbjct: 465 FGHCPVLRPGPALGCKHCWNTIDAHGRTLRRKTKYHCPECQANLCIVPCFQDYHEQR 521
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|817058763|ref|XP_012250860.1| (protein tramtrack, alpha isoform isoform X3 [Athalia rosae]) HSP 1 Score: 168.318 bits (425), Expect = 3.719e-41 Identity = 77/130 (59.23%), Postives = 97/130 (74.62%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIEGSSR 173 S Q++ L+WN+H +SVF+NL N+ +LVDVTLAAEG+H+QAHK+VLSACS YFQSLF+ P QHP+VILKDV F DLK +V FMY G V VS D++ +IKTA+ L+IKGL E T + K GSS Sbjct: 2 SMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGQHLQAHKVVLSACSTYFQSLFTVNPCQHPVVILKDVMFSDLKIMVDFMYYGEVNVSQDQLPSIIKTAESLKIKGLAEMHTASVTKWPSGSSE 131 The following BLAST results are available for this feature:
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of longitudinals lacking isoform g vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of longitudinals lacking isoform g vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold170_size291898:168722..175248- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold170_size291898-snap-gene-1.57 ID=maker-scaffold170_size291898-snap-gene-1.57|Name=longitudinals lacking isoform g|organism=Tigriopus kingsejongensis|type=gene|length=6527bp|location=Sequence derived from alignment at scaffold170_size291898:168722..175248- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'longitudinals lacking isoform g' has the following synonyms
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