longitudinals lacking isoform g, maker-scaffold170_size291898-snap-gene-1.57 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000002455 (supercontig:LSalAtl2s:LSalAtl2s1471:52173:56863:1 gene:EMLSAG00000002455 transcript:EMLSAT00000002455 description:"maker-LSalAtl2s1471-snap-gene-0.12") HSP 1 Score: 139.043 bits (349), Expect = 1.086e-34 Identity = 59/119 (49.58%), Postives = 86/119 (72.27%), Query Frame = 0 Query: 40 TGGPSGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 +G Q+Y L+WN+H ++SVF +L N + VDVTLA EG ++AHKMVLSACS YFQS+ TP +HPIV L+DV++ ++K +++FMY+G V V + +S ++K A+ L+IKGL E Sbjct: 2 SGNQQPQQYCLRWNNHQHNLLSVFEDLLNHEAFVDVTLAVEGLQLKAHKMVLSACSPYFQSMLYNTPDRHPIVFLRDVRYSEMKALLEFMYRGEVSVDQENLSSLLKVAEGLKIKGLAE 120
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000001548 (supercontig:LSalAtl2s:LSalAtl2s126:209647:210033:1 gene:EMLSAG00000001548 transcript:EMLSAT00000001548 description:"augustus_masked-LSalAtl2s126-processed-gene-2.5") HSP 1 Score: 126.331 bits (316), Expect = 2.832e-34 Identity = 59/117 (50.43%), Postives = 81/117 (69.23%), Query Frame = 0 Query: 42 GPSGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 G Q++ L+WND T MVS F +L + S DVTLA +G+ +AHKMVLSACS YF++L P +HPI+ILKDV F+ L I++FMY G V V+ D++ +KTA+ L++KGL E Sbjct: 4 GGDQQQFCLRWNDFQTNMVSSFKHLRDEKSFTDVTLACDGQTCKAHKMVLSACSPYFKALLEENPAKHPIIILKDVPFQHLTAILEFMYAGEVNVAQDQLPAFLKTAERLKVKGLAE 120
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000006827 (supercontig:LSalAtl2s:LSalAtl2s385:122699:145346:1 gene:EMLSAG00000006827 transcript:EMLSAT00000006827 description:"maker-LSalAtl2s385-augustus-gene-1.13") HSP 1 Score: 132.494 bits (332), Expect = 6.785e-33 Identity = 55/116 (47.41%), Postives = 84/116 (72.41%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEK 159 + +++ L+WN++ + +VS NL VDVTL+ EG+ I+AHK++LSACS YF+ +F TP HPI+ILKD Q+ DL+++V+++YQG +S + +S +KTAD LQIKGL E+ Sbjct: 2 TSEQFCLKWNNYQSNIVSALGNLKLDEDFVDVTLSCEGRTIKAHKVILSACSLYFRDVFRETPCNHPIIILKDTQYSDLESLVKYVYQGQXYISQENLSSFLKTADALQIKGLAEQ 117
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000009541 (supercontig:LSalAtl2s:LSalAtl2s613:57802:64681:-1 gene:EMLSAG00000009541 transcript:EMLSAT00000009541 description:"maker-LSalAtl2s613-snap-gene-0.15") HSP 1 Score: 129.413 bits (324), Expect = 2.246e-32 Identity = 54/113 (47.79%), Postives = 82/113 (72.57%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 Q+Y L+WN+H T ++ VF L S DV LAAEG+ ++ HK+VLSACS YF+ LFS+ ++ IVILKD +F+DL I++FMY+G + + +++S ++KTA+ L++KGL E Sbjct: 11 QQYCLKWNNHQTNLLKVFNRLLGSEQFTDVLLAAEGRTLRGHKVVLSACSSYFEQLFSSFNEKNQIVILKDTKFDDLAAIIEFMYKGEISIIQEQLSSLLKTAENLKVKGLAE 123
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000011119 (supercontig:LSalAtl2s:LSalAtl2s753:172698:206363:1 gene:EMLSAG00000011119 transcript:EMLSAT00000011119 description:"augustus_masked-LSalAtl2s753-processed-gene-1.0") HSP 1 Score: 118.627 bits (296), Expect = 7.438e-31 Identity = 52/118 (44.07%), Postives = 80/118 (67.80%), Query Frame = 0 Query: 45 GQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTE 162 G + L+W+ + +V+ F +L VDVTLA + AHK+VLSACS YF+ L + P HPI+IL+DV D++++++FMY G V++S D+I D +KTA+ LQI+GL E+F++ Sbjct: 40 GGKLRLKWDQYPQSLVNSFRDLKEEEDFVDVTLACNSQQFNAHKVVLSACSPYFRKLLKSNPCHHPIIILRDVVEIDIESLLKFMYNGEVQISEDRIKDFLKTAESLQIRGLAEQFSK 157
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000007481 (supercontig:LSalAtl2s:LSalAtl2s42:537429:544881:1 gene:EMLSAG00000007481 transcript:EMLSAT00000007481 description:"maker-LSalAtl2s42-augustus-gene-5.9") HSP 1 Score: 125.946 bits (315), Expect = 1.069e-30 Identity = 52/113 (46.02%), Postives = 81/113 (71.68%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 Q++ L+WN+H + ++SVF L SLVDVTL AEG+ ++AHK++LSACS YF+ +F A +HP++ +++V FE+LK +V++MY+G V + I+TA+ LQI+GL E Sbjct: 5 QQFCLKWNNHRSTILSVFDTLLEEESLVDVTLTAEGQFLRAHKVILSACSPYFRIMFRAANEKHPVIYMQNVDFENLKALVEYMYKGEANVPQHMLPSFIRTAESLQIRGLAE 117
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000004636 (supercontig:LSalAtl2s:LSalAtl2s241:1947:4259:-1 gene:EMLSAG00000004636 transcript:EMLSAT00000004636 description:"maker-LSalAtl2s241-snap-gene-0.4") HSP 1 Score: 115.161 bits (287), Expect = 3.459e-29 Identity = 50/112 (44.64%), Postives = 80/112 (71.43%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAE-GKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGL 156 Q+ L+W D+ + + +VF +L + VDVT++ E GK ++ HK+VLSACS YFQ+LF P QHPIVIL+DV++ +L I+++MY+G + V +S ++++A+ LQI+GL Sbjct: 30 QQLCLKWADYQSNLTNVFDSLLQQEAFVDVTISTEAGKSLKCHKVVLSACSAYFQNLFVENPCQHPIVILRDVEWRELCHIIEYMYKGQIHVGPGDLSPLLRSAESLQIRGL 141
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000005175 (supercontig:LSalAtl2s:LSalAtl2s273:353922:396706:-1 gene:EMLSAG00000005175 transcript:EMLSAT00000005175 description:"augustus_masked-LSalAtl2s273-processed-gene-4.4") HSP 1 Score: 118.242 bits (295), Expect = 6.533e-28 Identity = 47/63 (74.60%), Postives = 51/63 (80.95%), Query Frame = 0 Query: 682 FGHVPKGRDGPALGCNHCWNSTDGNGRILRRKTKYQCVECGVNLCIVPCFQQYHEARDRETSQ 744 FGH PK R+GPALGCN CWN+TD NGRILRRKTKY C EC NLCIVPCFQ YHEA ++E Q Sbjct: 559 FGHCPKAREGPALGCNFCWNTTDINGRILRRKTKYHCPECQANLCIVPCFQSYHEALEKEDRQ 621
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000003038 (supercontig:LSalAtl2s:LSalAtl2s1728:22097:26590:1 gene:EMLSAG00000003038 transcript:EMLSAT00000003038 description:"maker-LSalAtl2s1728-augustus-gene-0.10") HSP 1 Score: 111.694 bits (278), Expect = 4.756e-26 Identity = 47/111 (42.34%), Postives = 75/111 (67.57%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGL 156 Q Y+L+WN+H ++S F L + +LVD TL E ++AHK+VLSACS YFQ +F+ +HPI++LKD++ + + IV FMY+G V +++ +IK A+ L+++GL Sbjct: 4 QHYSLRWNNHQXHVLSAFDTLLQNEALVDCTLVCEDTSVRAHKVVLSACSPYFQKIFTDNVCKHPIIVLKDIKGWEAQCIVDFMYKGETSVPESQLTSLIKAAESLKVRGL 114
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000000011 (supercontig:LSalAtl2s:LSalAtl2s1003:80801:91923:-1 gene:EMLSAG00000000011 transcript:EMLSAT00000000011 description:"maker-LSalAtl2s1003-snap-gene-1.13") HSP 1 Score: 112.079 bits (279), Expect = 5.417e-26 Identity = 49/118 (41.53%), Postives = 78/118 (66.10%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHP-----IVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 ++Y L+W+ + T +++ F L S +L DVTL EG+ +AH++VL+ACS +F+SLFS P P VIL + +DL+ ++ FMY+G + D+I+ V+KTA++LQ+KGL E Sbjct: 34 EKYKLKWSKYETNILTAFHGLLESETLSDVTLFCEGQTFKAHRLVLAACSTHFESLFSHAPINAPTNNQFFVILDGTRADDLQILLHFMYRGEAYLHHDRINSVLKTAEVLQVKGLSE 151
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|82185952|sp|Q6NYM1.1|KLH21_DANRE (RecName: Full=Kelch-like protein 21) HSP 1 Score: 70.4774 bits (171), Expect = 2.767e-11 Identity = 37/106 (34.91%), Postives = 57/106 (53.77%), Query Frame = 0 Query: 55 HSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPI--VILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 H+ ++ L DVTL AEGK H+ VL+A S YF+++F+ T + + V+L +V E L +V F Y G V V+ D + ++KTAD+ Q + E Sbjct: 20 HAVNLLRGIHELRAERKFFDVTLCAEGKEFHCHRTVLAAASMYFRAMFAGTLRESVMDRVVLHEVSAELLGLLVDFCYTGRVTVTHDNVDLLLKTADLFQFPSVKE 125
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|62510938|sp|Q9N010.1|KBTB4_MACFA (RecName: Full=Kelch repeat and BTB domain-containing protein 4) HSP 1 Score: 70.0922 bits (170), Expect = 3.058e-11 Identity = 30/115 (26.09%), Postives = 73/115 (63.48%), Query Frame = 0 Query: 72 LVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQ--HPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIE-GSSRRLLSVPSQHS 183 DVT++ EG+ Q H++VLSA S +F+S+F++ + + +++L+DV + +V ++Y G+V++ ++++ ++ + +DM Q+ L E+ + + ++ G+ +++ + +HS Sbjct: 69 FADVTISVEGREFQLHRLVLSAQSCFFRSMFTSNLKEAHNRVIVLQDVSESVFQLLVDYIYHGTVKLRAEELQEIYEVSDMYQLTSLFEECSRFLARTVQVGNCLQVMWLADRHS 183
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|75054711|sp|Q5R4S6.1|KBTB4_PONAB (RecName: Full=Kelch repeat and BTB domain-containing protein 4) HSP 1 Score: 69.707 bits (169), Expect = 4.035e-11 Identity = 30/115 (26.09%), Postives = 73/115 (63.48%), Query Frame = 0 Query: 72 LVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQ--HPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIE-GSSRRLLSVPSQHS 183 DVT++ EG+ Q H++VLSA S +F+S+F++ + + +++L+DV + +V ++Y G+V++ ++++ ++ + +DM Q+ L E+ + + ++ G+ +++ + +HS Sbjct: 44 FADVTISVEGREFQLHRLVLSAQSCFFRSMFTSNLKEAHNRVIVLQDVSESVFQLLVDYIYHGTVKLRAEELQEIYEVSDMYQLTSLFEECSRFLARTVQVGNCLQVMWLADRHS 158
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|116242601|sp|Q9NVX7.3|KBTB4_HUMAN (RecName: Full=Kelch repeat and BTB domain-containing protein 4; AltName: Full=BTB and kelch domain-containing protein 4) HSP 1 Score: 69.707 bits (169), Expect = 4.214e-11 Identity = 30/115 (26.09%), Postives = 73/115 (63.48%), Query Frame = 0 Query: 72 LVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQ--HPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIE-GSSRRLLSVPSQHS 183 DVT++ EG+ Q H++VLSA S +F+S+F++ + + +++L+DV + +V ++Y G+V++ ++++ ++ + +DM Q+ L E+ + + ++ G+ +++ + +HS Sbjct: 44 FADVTISVEGREFQLHRLVLSAQSCFFRSMFTSNLKEAHNRVIVLQDVSESVFQLLVDYIYHGTVKLRAEELQEIYEVSDMYQLTSLFEECSRFLARTVQVGNCLQVMWLADRHS 158
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|81913123|sp|Q8BGY4.1|KLH26_MOUSE (RecName: Full=Kelch-like protein 26) HSP 1 Score: 69.3218 bits (168), Expect = 6.068e-11 Identity = 39/118 (33.05%), Postives = 60/118 (50.85%), Query Frame = 0 Query: 55 HSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSA--TPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQ---IKGLGEKFTEAANKI 167 HST ++ A L L+DV L + AHK+VL+ACSDYF+++F+ ++ L+ V L+ I+ F Y V + D + DV+ A LQ + L E F +AA + Sbjct: 36 HSTGLLQGLAALRAQGQLLDVVLTVNSEAFHAHKVVLAACSDYFRAMFTGGMREANQAVIQLQGVSARGLRHIIDFAYSAEVTLDLDCVQDVLGAAVFLQMLPVVELCEDFLKAAMSV 153
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|1325306524|ref|XP_023334874.1| (serine/arginine repetitive matrix protein 1-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 224.557 bits (571), Expect = 1.124e-60 Identity = 197/505 (39.01%), Postives = 261/505 (51.68%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIEGSSRRLLSVPSQHSVNSRQYSTESLPEYFNRTSS---FSPRQASTDSARQLSFESSVSPLVR--KHPTPPSSPPRHL-------RKKFRRLSGCGSSSDRGNSLEDDRSPAHPAQRTTSPPAIHLSPSRQSSSSTDPEANLAVGNHAKKKRELFSARSSRSGGSNKSSVSDYSRDQSFKQLESSGSSGQSHSISQSQEEALTTSSSLNVQTTSSLTVPGS-GRTLVRAQSAGDATSSLVHSDSKRSRFLLKRQDCIEKGIDLTTDTSTENESAAAQPTVKSSP-----------NSPLMGHSYPKAVSPMDVKSEPPLHLSAPSGPPLA--SGPPSTFAKQKPGPRLLSPPKSNMHPISPYAESCPPHLVPPPPPMSHKLP 524 Q ++L+WN+H +VSVF L+ + SLVDV+LAAEG+H+QAHK+VLSACSDYFQ+LF+A P QHPIVILKDV FEDL+ +V+FMY G V VSSDK+ V+KTAD LQIKGL EK E + + G+S RLL VP+ H RQ STESLPEY +R+ S F P +A + +R SF+S + R + +PP SP ++ RKKFR S S+S +DR SPS S S T+ + AKKKR +F ++ S GS S + + S +S K+ + GS S SIS S + L + +L VPG+ RTLVRA S S+ R R +LKRQ C E + T E ++ + TV + P +P +SP V P PS PL P ++ PGPRL PP + + P P ++P P PM LP Sbjct: 7 QYFSLRWNNHPVNLVSVFTGLYQAESLVDVSLAAEGRHLQAHKVVLSACSDYFQALFAANPCQHPIVILKDVSFEDLQIVVKFMYHGIVNVSSDKLPGVLKTADALQIKGL-EKNNEMLSPFL-GTS-RLLPVPTHH---GRQPSTESLPEYLHRSRSEGGFFPHRAHSAESRGYSFDSGPLEISRHKRLLSPPGSPAHNIPPGTSLARKKFRNRSEHESTST------EDRG----EGEVKEEVKEDKSPSLYSGSDTE--------HIAKKKRAMFQSQKCSSSGSRSSELHNSSEGRSDKENKRQGSLSSSQSISHSSDR-----EELEIHQKDTLQVPGAHCRTLVRAAST---------SELNRGR-ILKRQQCQESNEEGEGVTKIEPPTSPPRITVNTPPVKRPKSFSPSPIPSPPPEEHP--ISPAPVSPHPETS-RQPSIDPLCGLESVPLLYSSSGPGPRL--PPSNLLRPHLPSVR-----VIPEPEPMHELLP 462 HSP 2 Score: 117.087 bits (292), Expect = 1.481e-23 Identity = 51/78 (65.38%), Postives = 55/78 (70.51%), Query Frame = 0 Query: 668 LSLSSSLTTSIQPDFGHVPKGRDGPALGCNHCWNSTDGNGRILRRKTKYQCVECGVNLCIVPCFQQYHEARDRETSQN 745 LS SS FGH PK RDGPAL CN CWN+TDG+GRILRRKTKY C EC NLCIVPCFQQ+HEA + E N Sbjct: 506 LSSSSGRPVGSMEQFGHCPKARDGPALSCNFCWNTTDGSGRILRRKTKYHCPECQTNLCIVPCFQQFHEALESEPQNN 583
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|1325306518|ref|XP_023334873.1| (serine/arginine repetitive matrix protein 1-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 223.787 bits (569), Expect = 2.399e-60 Identity = 197/506 (38.93%), Postives = 261/506 (51.58%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIEGSSRRLLSVPSQHSVNSRQYSTESLPEYFNRTSS---FSPRQASTDSARQLSFESSVSPLVR--KHPTPPSSPPRHL--------RKKFRRLSGCGSSSDRGNSLEDDRSPAHPAQRTTSPPAIHLSPSRQSSSSTDPEANLAVGNHAKKKRELFSARSSRSGGSNKSSVSDYSRDQSFKQLESSGSSGQSHSISQSQEEALTTSSSLNVQTTSSLTVPGS-GRTLVRAQSAGDATSSLVHSDSKRSRFLLKRQDCIEKGIDLTTDTSTENESAAAQPTVKSSP-----------NSPLMGHSYPKAVSPMDVKSEPPLHLSAPSGPPLA--SGPPSTFAKQKPGPRLLSPPKSNMHPISPYAESCPPHLVPPPPPMSHKLP 524 Q ++L+WN+H +VSVF L+ + SLVDV+LAAEG+H+QAHK+VLSACSDYFQ+LF+A P QHPIVILKDV FEDL+ +V+FMY G V VSSDK+ V+KTAD LQIKGL EK E + + G+S RLL VP+ H RQ STESLPEY +R+ S F P +A + +R SF+S + R + +PP SP ++ RKKFR S S+S +DR SPS S S T+ + AKKKR +F ++ S GS S + + S +S K+ + GS S SIS S + L + +L VPG+ RTLVRA S S+ R R +LKRQ C E + T E ++ + TV + P +P +SP V P PS PL P ++ PGPRL PP + + P P ++P P PM LP Sbjct: 7 QYFSLRWNNHPVNLVSVFTGLYQAESLVDVSLAAEGRHLQAHKVVLSACSDYFQALFAANPCQHPIVILKDVSFEDLQIVVKFMYHGIVNVSSDKLPGVLKTADALQIKGL-EKNNEMLSPFL-GTS-RLLPVPTHH---GRQPSTESLPEYLHRSRSEGGFFPHRAHSAESRGYSFDSGPLEISRHKRLLSPPGSPAHNIPPGSTSLARKKFRNRSEHESTST------EDRG----EGEVKEEVKEDKSPSLYSGSDTE--------HIAKKKRAMFQSQKCSSSGSRSSELHNSSEGRSDKENKRQGSLSSSQSISHSSDR-----EELEIHQKDTLQVPGAHCRTLVRAAST---------SELNRGR-ILKRQQCQESNEEGEGVTKIEPPTSPPRITVNTPPVKRPKSFSPSPIPSPPPEEHP--ISPAPVSPHPETS-RQPSIDPLCGLESVPLLYSSSGPGPRL--PPSNLLRPHLPSVR-----VIPEPEPMHELLP 463 HSP 2 Score: 116.701 bits (291), Expect = 1.530e-23 Identity = 51/78 (65.38%), Postives = 55/78 (70.51%), Query Frame = 0 Query: 668 LSLSSSLTTSIQPDFGHVPKGRDGPALGCNHCWNSTDGNGRILRRKTKYQCVECGVNLCIVPCFQQYHEARDRETSQN 745 LS SS FGH PK RDGPAL CN CWN+TDG+GRILRRKTKY C EC NLCIVPCFQQ+HEA + E N Sbjct: 507 LSSSSGRPVGSMEQFGHCPKARDGPALSCNFCWNTTDGSGRILRRKTKYHCPECQTNLCIVPCFQQFHEALESEPQNN 584
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|1330915264|gb|PNF34036.1| (hypothetical protein B7P43_G03482, partial [Cryptotermes secundus] >gi|1330915265|gb|PNF34037.1| hypothetical protein B7P43_G03482, partial [Cryptotermes secundus]) HSP 1 Score: 167.548 bits (423), Expect = 1.814e-42 Identity = 74/115 (64.35%), Postives = 93/115 (80.87%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 S Q++ L+WN+H +SVF NL NS SLVDVTLAAEG+H+QAH++VLSACS YFQ+LFS P QHPIVILKDV++ DLKT+V FMY G V VS D++ ++KTA+ML+IKGL E Sbjct: 2 SIQQFCLRWNNHQPNFISVFTNLLNSESLVDVTLAAEGRHLQAHRVVLSACSTYFQTLFSVNPCQHPIVILKDVKYNDLKTMVDFMYYGEVNVSHDQLPAILKTAEMLKIKGLAE 116
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|1133423697|ref|XP_019867561.1| (PREDICTED: LOW QUALITY PROTEIN: longitudinals lacking protein, isoforms H/M/V-like [Aethina tumida]) HSP 1 Score: 172.555 bits (436), Expect = 2.215e-42 Identity = 75/113 (66.37%), Postives = 95/113 (84.07%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 Q+Y L+WN+H +SVF+NL NS SLVDVTLAAEGKH+QAHK+VLSACS YFQ+LF+ P QHPIVILKDV+F+DLK +V+FMY G V VS D+++ ++KTA+ML+IKGL E Sbjct: 4 QQYCLRWNNHQPNFISVFSNLLNSESLVDVTLAAEGKHLQAHKVVLSACSSYFQTLFTINPCQHPIVILKDVKFKDLKVMVEFMYYGEVNVSQDQLTHILKTAEMLKIKGLAE 116 HSP 2 Score: 97.8265 bits (242), Expect = 1.654e-17 Identity = 38/53 (71.70%), Postives = 42/53 (79.25%), Query Frame = 0 Query: 684 HVPKGRDGPALGCNHCWNSTDGNGRILRRKTKYQCVECGVNLCIVPCFQQYHE 736 H P R GPALGCN CWN+ D +GRILRRKTKY C EC +LCIVPCFQ+YHE Sbjct: 470 HCPVVRPGPALGCNFCWNTVDTHGRILRRKTKYHCPECQTSLCIVPCFQEYHE 522
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|998513574|ref|XP_015517423.1| (PREDICTED: longitudinals lacking protein, isoforms H/M/V isoform X2 [Neodiprion lecontei]) HSP 1 Score: 170.629 bits (431), Expect = 5.453e-42 Identity = 78/130 (60.00%), Postives = 98/130 (75.38%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIEGSSR 173 S Q++ L+WN+H +SVF+NL N+ +LVDVTLAAEG+H+QAHK+VLSACS YFQSLF+ P QHPIVILKDV+F DLK +V FMY G V VS D++ +IKTA+ L+IKGL E T + K GSS Sbjct: 2 SMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNVSQDQLPSIIKTAESLKIKGLAEMHTASVTKWPSGSSE 131
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|820865484|ref|XP_012349250.1| (PREDICTED: protein tramtrack, alpha isoform isoform X2 [Apis florea]) HSP 1 Score: 170.244 bits (430), Expect = 8.098e-42 Identity = 78/130 (60.00%), Postives = 98/130 (75.38%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIEGSSR 173 S Q++ L+WN+H +SVF+NL N+ +LVDVTLAAEG+H+QAHK+VLSACS YFQSLF+ P QHPIVILKDV+F DLK IV FMY G V +S D++S +IKTA+ L+IKGL E + K GSS Sbjct: 2 SMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIIVDFMYYGEVNISQDQLSSIIKTAESLKIKGLAEMHNASLTKWPSGSSE 131
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|817058765|ref|XP_012250861.1| (longitudinals lacking protein, isoforms H/M/V isoform X5 [Athalia rosae]) HSP 1 Score: 168.318 bits (425), Expect = 9.843e-42 Identity = 77/130 (59.23%), Postives = 97/130 (74.62%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIEGSSR 173 S Q++ L+WN+H +SVF+NL N+ +LVDVTLAAEG+H+QAHK+VLSACS YFQSLF+ P QHP+VILKDV F DLK +V FMY G V VS D++ +IKTA+ L+IKGL E T + K GSS Sbjct: 2 SMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGQHLQAHKVVLSACSTYFQSLFTVNPCQHPVVILKDVMFSDLKIMVDFMYYGEVNVSQDQLPSIIKTAESLKIKGLAEMHTASVTKWPSGSSE 131
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|1330915266|gb|PNF34038.1| (hypothetical protein B7P43_G03482, partial [Cryptotermes secundus]) HSP 1 Score: 167.162 bits (422), Expect = 1.141e-41 Identity = 74/115 (64.35%), Postives = 93/115 (80.87%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 S Q++ L+WN+H +SVF NL NS SLVDVTLAAEG+H+QAH++VLSACS YFQ+LFS P QHPIVILKDV++ DLKT+V FMY G V VS D++ ++KTA+ML+IKGL E Sbjct: 2 SIQQFCLRWNNHQPNFISVFTNLLNSESLVDVTLAAEGRHLQAHRVVLSACSTYFQTLFSVNPCQHPIVILKDVKYNDLKTMVDFMYYGEVNVSHDQLPAILKTAEMLKIKGLAE 116
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|998513570|ref|XP_015517421.1| (PREDICTED: longitudinals lacking protein, isoforms H/M/V isoform X1 [Neodiprion lecontei] >gi|998513572|ref|XP_015517422.1| PREDICTED: longitudinals lacking protein, isoforms H/M/V isoform X1 [Neodiprion lecontei]) HSP 1 Score: 170.629 bits (431), Expect = 1.152e-41 Identity = 78/129 (60.47%), Postives = 98/129 (75.97%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIEGSS 172 S Q++ L+WN+H +SVF+NL N+ +LVDVTLAAEG+H+QAHK+VLSACS YFQSLF+ P QHPIVILKDV+F DLK +V FMY G V VS D++ +IKTA+ L+IKGL E T + K GSS Sbjct: 2 SMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNVSQDQLPSIIKTAESLKIKGLAEMHTASVTKWPSGSS 130 HSP 2 Score: 107.457 bits (267), Expect = 1.262e-20 Identity = 44/62 (70.97%), Postives = 48/62 (77.42%), Query Frame = 0 Query: 682 FGHVPKGRDGPALGCNHCWNSTDGNGRILRRKTKYQCVECGVNLCIVPCFQQYHEARDRETS 743 GH P R GPALGCNHCWN+ D +GRILRRKTKY C EC NLCIVPCFQ++HE R RE S Sbjct: 477 LGHCPVQRPGPALGCNHCWNTIDAHGRILRRKTKYHCPECQTNLCIVPCFQEFHE-RQREVS 537
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|820865482|ref|XP_012349249.1| (PREDICTED: protein tramtrack, alpha isoform isoform X1 [Apis florea]) HSP 1 Score: 170.244 bits (430), Expect = 1.373e-41 Identity = 78/129 (60.47%), Postives = 98/129 (75.97%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIEGSS 172 S Q++ L+WN+H +SVF+NL N+ +LVDVTLAAEG+H+QAHK+VLSACS YFQSLF+ P QHPIVILKDV+F DLK IV FMY G V +S D++S +IKTA+ L+IKGL E + K GSS Sbjct: 2 SMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIIVDFMYYGEVNISQDQLSSIIKTAESLKIKGLAEMHNASLTKWPSGSS 130 HSP 2 Score: 99.7525 bits (247), Expect = 4.034e-18 Identity = 39/58 (67.24%), Postives = 43/58 (74.14%), Query Frame = 0 Query: 682 FGHVPKGRDGPALGCNHCWNSTDGNGRILRRKTKYQCVECGVNLCIVPCFQQYHEARD 739 GH P R GPAL CNHCWN+ D GR LRRKTKY C +C NLCIVPCFQ+YHE R+ Sbjct: 473 VGHCPVLRPGPALRCNHCWNTIDAQGRTLRRKTKYHCPQCQDNLCIVPCFQEYHERRE 530 The following BLAST results are available for this feature:
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
Pagesback to top
BLAST of longitudinals lacking isoform g vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of longitudinals lacking isoform g vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold170_size291898:168722..175248- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold170_size291898-snap-gene-1.57 ID=maker-scaffold170_size291898-snap-gene-1.57|Name=longitudinals lacking isoform g|organism=Tigriopus kingsejongensis|type=gene|length=6527bp|location=Sequence derived from alignment at scaffold170_size291898:168722..175248- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'longitudinals lacking isoform g' has the following synonyms
Add to Basket
|