116 kda u5 small nuclear ribonucleoprotein component, maker-scaffold178_size283195-snap-gene-0.10 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 116 kda u5 small nuclear ribonucleoprotein component vs. L. salmonis genes
Match: EMLSAG00000008753 (supercontig:LSalAtl2s:LSalAtl2s543:242325:249249:1 gene:EMLSAG00000008753 transcript:EMLSAT00000008753 description:"maker-LSalAtl2s543-augustus-gene-1.72") HSP 1 Score: 1492.25 bits (3862), Expect = 0.000e+0 Identity = 710/922 (77.01%), Postives = 810/922 (87.85%), Query Frame = 0
Query: 1 MDPDYYDEFGNYIGPDLESEESSEDEAEAGALGEAGGSEVVAGEDQLEDEDEAGVSSTAVVLHEDKKYYPTAMEVFGPEVETLVQEEDAQPLTEPIIAPVKRNKFQHVEQELPETSYDAEFLADLMDNPHLVRNVSLVGHLHHGKSSFVDCLMQETHPDLRTKEDKPLRYTDTLFTEQERGVTIKSMPVTLVLQDLR-SKSFLINLFDTPGHVNFSDETTASMRLSDGVVVFVDAAEGVMLNTERLVKHAIQEKLAITVCINKIDKLVLELKLPPIDAYFKLRHIVDEINGLLSLYSEEENPQKVSPILGNVCFASSQFGFCLTLRSFAQLYSETYGGSIDVSAFAKRLWGDMFFNPKTRKFAKKSPHASAQRSFVEFILEPLYKIFAQVVGDVDTCLPSLCEELGIRLTKEESKMNIRPLLKLICTRFFGDFNGFVEMLAHHVPSPAENAKNKVQHIYTGNLDTVRAEDMINCDQDGRLMVHTTKQYPNDDLTCFHVFGRIMSGTLHSGQEIRLLGENYTIYDEEDSRNMTVGRLWIYEGRYKIEVNRVPAGNWVLIEGIDQPIVKTSTITDLKGGDEDLYIFRPLKFNTQSVIKIAVEPVNPSELPKMLEGLRKVNKSYPLLNTKVEESGEHVVLGTGELYLDCVMHDLRKLYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVAINWNKKRLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLSSEVDKGLLGSVKDSIVQGFQWGTREGPLCEEPIRNGKFKILDAVIASEPIHRGGGQVIPTARRVAYSAFLMATPRLMEPYMFVEVQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDNT 921
MDPD YDEFGNY+GP+LESEES DE + V G D L+D++E +EDKKYYPT+ EV+GP+VET+V EEDAQPL+EPI+APVK++KFQ +EQ+LPETSY + +L ++M+ P VRNV+ VGHLHHGKSSF DCL+Q+THP RTK+DKP+RYTDTLFTEQERGV+IK+MP++LV Q +R KS+L+NL DTPGHVNFSDE TA+MRLSDGVVVFVDA+ GVMLNTERL KHA+QE+ A+T+CINKID+L+LELKLPP DAY+KLRHIV+EINGLLSLYS++ Q +SP+LGNVCFASSQ+ C TL+SFA+LY + Y +IDV+ FA+RLWGD++FN KTRKF+KK PH SAQRSFVEFILEP+YK+FAQ+VGDVD+CLP+L EELGI+L+KEE+++NIRPLL+LI +F GDFNGF EMLA H+PSP ENAK KV HIYTGNLD++RA+ M++CD +G LMVHTTKQYP DD TCFHVFGR+ SG L +G +IRLLGENYT++DEEDSR +TVGRLWIYE RYK+EV VPAG+WVLIEG+DQP+VKTSTIT + G +E++ IFRPLKFNTQS+IKIAVEPVNPSELPKML+GLRKVNKSYPLLNTKVEESGEHV+LGTGELYLDCVMHDLRKLYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENE V+I WNKK LGEFFQ +YDWDLLAARSIWAFGPDATGPNILVDDTL SEVDKGLLGSVKD IVQGFQWG REGPLCEEPIRN KFK LDAVIA+EPIHRGGGQ+IPTARR AYSAFLMATPRLMEPYMFVEV PADCVSAVYTVL RRGH TQDAPVPGSPLY KAFIPA+DSFGFETDLRTHTQGQAF LSVFHHWQIVPGDPLD +
Sbjct: 1 MDPDMYDEFGNYVGPELESEESESDEEDEEE---------VHGNDNLKDDEE----------NEDKKYYPTSAEVYGPDVETIVHEEDAQPLSEPIVAPVKKHKFQFIEQKLPETSYSSVYLQEMMEIPTRVRNVAFVGHLHHGKSSFADCLVQQTHPGFRTKDDKPIRYTDTLFTEQERGVSIKAMPLSLVCQGIRGQKSYLVNLLDTPGHVNFSDEVTAAMRLSDGVVVFVDASXGVMLNTERLXKHAVQEQCAVTICINKIDRLILELKLPPQDAYYKLRHIVEEINGLLSLYSDKNAEQVISPLLGNVCFASSQYSLCFTLKSFAKLYGDAYD-TIDVAEFARRLWGDIYFNAKTRKFSKKPPHGSAQRSFVEFILEPIYKLFAQIVGDVDSCLPALIEELGIKLSKEETRLNIRPLLRLINQKFLGDFNGFTEMLAEHIPSPEENAKVKVPHIYTGNLDSMRAKGMLDCDSEGSLMVHTTKQYPTDDTTCFHVFGRVFSGRLRAGMDIRLLGENYTMFDEEDSRILTVGRLWIYEARYKVEVLSVPAGSWVLIEGVDQPVVKTSTITAV-GSEEEICIFRPLKFNTQSIIKIAVEPVNPSELPKMLDGLRKVNKSYPLLNTKVEESGEHVILGTGELYLDCVMHDLRKLYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENERVSITWNKKTLGEFFQAQYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKGLLGSVKDPIVQGFQWGXREGPLCEEPIRNTKFKXLDAVIANEPIHRGGGQIIPTARRXAYSAFLMATPRLMEPYMFVEVLCPADCVSAVYTVLRNRRGHATQDAPVPGSPLYITKAFIPAVDSFGFETDLRTHTQGQAFALSVFHHWQIVPGDPLDKS 901
BLAST of 116 kda u5 small nuclear ribonucleoprotein component vs. L. salmonis genes
Match: EMLSAG00000007952 (supercontig:LSalAtl2s:LSalAtl2s46:418158:421914:1 gene:EMLSAG00000007952 transcript:EMLSAT00000007952 description:"augustus_masked-LSalAtl2s46-processed-gene-4.0") HSP 1 Score: 614.764 bits (1584), Expect = 0.000e+0 Identity = 328/877 (37.40%), Postives = 506/877 (57.70%), Query Frame = 0
Query: 125 LMDNPHLVRNVSLVGHLHHGKSSFVDCLMQETHPDLRTKEDKPLRYTDTLFTEQERGVTIKSMPVTLVLQ-------------DLRSKSFLINLFDTPGHVNFSDETTASMRLSDGVVV-----------------------------FVDAAEGVMLNTERLVKHAIQEKLAITVCINKIDKLVLELKLPPIDAYFKLRHIVDEINGLLSLYSEEENPQ---KVSPILGNVCFASSQFGFCLTLRSFAQLYSETYGGSIDVSAFAKRLWGDMFFNPKTRKFAKKSPHASAQRSFVEFILEPLYKIFAQVVG----DVDTCLPSLCEELGIRLTKEESKMNIRPLLKLICTRFFGDFNGFVEMLAHHVPSPAENAKNKVQHIYTGNLDTVRAEDMINCDQDGRLMVHTTKQYPNDDLTCFHVFGRIMSGTLHSGQEIRLLGENYTIYDEEDSRNMTVGRLWIYEGRYKIEVNRVPAGNWVLIEGIDQPIVKTSTITDLKGGDEDLYIFRPLKFNTQSVIKIAVEPVNPSELPKMLEGLRKVNKSYPLLNTKVEESGEHVVLGTGELYLDCVMHDLRKLYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVAINWNKKRLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLSSEVDKGLLGSVKDSIVQGFQWGTRE--GPLCEEPIRNGKFKILDAVIASEPIHRGGGQVIPTARRVAYSAFLMATPRLMEPYMFVEVQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDNTC---------PRRTQVREVVPHVDGVLDE 941
+MD H +RN+S++ H+ HGKS+ D L+ + K + R TDT EQER +TIKS +++ + + FLINL D+PGHV+FS E TA++R++DG + VD GV + TE +++ AI E++ + +NK+D+ +LEL+L + Y + +V+ +N +++ Y ++E P +V P G+V F S G+ +L+ FA +Y+ +G +DV K+ WG+ FFNPKT+K++K S +RSF ++L+P+YK+F ++ D D L L E+ +LT +E + +PL+K + + + M+ H+PSP K + + +Y G D M NCD +G LM++ +K P D F+ FGR+ SG + +G + R++G NYT +ED + R + GRY + VP GN + G+DQ +VKT TIT K + + + +KF+ V+++A EP PS+LPK++EGL++++KS P++ EESGEH++ G GEL L+ + DL + +++I +K +DPVVS+ ETV+ SS C +++PNK N++ M A P+ GL EDI+ V+ + K G + KY++D+ AR IW FGPD GPNIL+D T + L +KDS+V GFQW T+E G +C+E +R +F I D + ++ IHRGGGQ+IPTARRV Y+ L A+PRLMEP VE+Q P + V +Y VL RRRGHV +++ V G+P++ +KA++P +SFGF DLR++T GQAF VF HWQI+ GDPLD T +R ++E +P + LD+
Sbjct: 12 IMDKKHNIRNMSVIAHVDHGKSTLTDSLLSKAGIIASAKAGEA-RATDTRKDEQERCITIKSTAISMYFEMSAADMAFIKQEKEKGECGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVDCVSGVCVQTETVLRQAIAERIKPILFMNKMDRALLELQLDQEELYQTFQRVVENVNVIIATYCDDEGPMGVVRVDPTDGSVGFGSGLHGWAFSLKQFADMYALKFG--VDVDKLMKKFWGENFFNPKTKKWSK-SKAEDNKRSFCMYVLDPIYKVFDAIMNFKKEDTDKLLEKL--EIKSKLTYDELQQEGKPLMKAVMRNWLPAGDAMFLMIVVHLPSPVTAQKYRSEMLYEGPFDDAACVAMKNCDPNGPLMMYVSKMVPTSDKGRFYAFGRVFSGRIGTGMKCRIMGPNYTPGKKEDLYEKPIQRSILMMGRYIEAIEDVPCGNICGLVGVDQFLVKTGTITTFK----EAHNLKVMKFSVSPVVRVAXEPKXPSDLPKLVEGLKRLSKSDPMVQCFTEESGEHIIAGAGELXLEICLKDLEEDHAQIPLKKSDPVVSYRETVISESSQMCLSKSPNKHNRLFMRAVPMPDGLPEDIDRGDVSPKDDFKVRGRYLADKYEYDITEARKIWCFGPDTNGPNILMDCTKGVQ----YLNEIKDSVVAGFQWATKEXTGVMCDENLRGIRFNIYDVTLHTDAIHRGGGQIIPTARRVLYACILTASPRLMEPVYLVEIQCPENAVGGIYGVLNRRRGHVFEESQVVGTPMFHVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQIMQGDPLDGTSKAYTILQETKKRKGLKESLPDLSSYLDK 874
BLAST of 116 kda u5 small nuclear ribonucleoprotein component vs. L. salmonis genes
Match: EMLSAG00000008108 (supercontig:LSalAtl2s:LSalAtl2s482:182113:187772:1 gene:EMLSAG00000008108 transcript:EMLSAT00000008108 description:"maker-LSalAtl2s482-snap-gene-1.29") HSP 1 Score: 335.495 bits (859), Expect = 8.855e-101 Identity = 247/889 (27.78%), Postives = 424/889 (47.69%), Query Frame = 0
Query: 120 EFLADLMDNPHLVRNVSLVGHLHHGKSSFVDCLMQETHPDLRTKEDKPLRYTDTLFTEQERGVTIKSMPVTLVLQDLRSKSFLINLFDTPGHVNFSDETTASMRLSDGVVVFVDAAEGVMLNTERLVKHAIQEKLAITVCINKIDKLVLELKLPPIDAYFKLRHIVDEINGLLS-LYS-------------EEENPQKVSPILGNVCFASSQFGFCLTLRSFAQLYSETYGGSIDVSAFAKRLWGDMFFNPKTRKFAKKSPHASAQRSFVEFILEPLYKIFAQVVGDVDTCLPSLCEELGIRLTKEE-SKMNIRPLLKLICTRFFGDFNGFVEMLAHHVPSPAENAKNKVQHIYTGNLDTVRAEDMINCDQDGRLMVHTTKQYPNDDLTCFHVFGRIMSGTLHSGQEIRLLGENYTIYDEEDS-RNM-------TVGRLWIYEGRYKIEVNRVPAGNWVLIEGIDQPIVKTSTITDLKGGDEDLYIFRP----LKFNTQSVIKIAVEPVNPSELPKMLEGLRKVNKSYPLLNTKVEESGEHVVLGTGELYLDCVMHDLRKLYSEIDIKVADPVVSFCETVVETSSLKCF-----------------AETPNKKNKITMIAEPLEKGLAE--------------DIENEVVAINWNKKRLGEFFQTKYDWDLL------------AARSIWAFGPDATGPNILV--------------DDTLSSEVDKGLLGSVKDSIVQGFQWGTREGPLCEEPIRNGKFKILDAVIAS----EPIHRG--GGQVIPTARRVAYSAFLMATPRLMEPYMFVEVQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPL 918
E L DL P+ +RN+ ++ H+ HGK++ D L+ + + + LRY D+ EQ G+T+KS V+L ++ LINL D+PGHV+FS E ++RLSDG +V +D E V T ++K A E + + +NK+D+L+LE ++ P+DAY L I++ N ++ L+S +++ SP GNV FAS+ G+ + +FAQ+YS+ G S V ++ LWGD + N KT+K K + + + FV+ IL+ ++ I+ + D L + L +++ + + +I+ + + ++ ++ + H+PSP + +++++H+ + R D + +K+ +D L C S E +L + YDE+ + RN TV L++ GR ++ PAGN + I G++ I+K++T++ +F P + ++ ++++A+ P SEL K++ GL +N++ + + + GEH+++ GE++L+ + DLR+ Y+ IDI V++P+V+F ET+V+ + ETP+K++ I M A PL L + ++E+ V N +K+ L + D D L A IWAFGP T N+L D +S E L + S + GFQ + GPLC+EP+R F + + I S E G GQ+I T + SAF RLM ++ A+ + +Y VL +R G V ++ + GS +T+ A +P ++S F +R T G A VF HW+I+ DP
Sbjct: 7 EKLKDLQGQPNHIRNICILAHVDHGKTTLADSLLA-CNGIISLRLSGTLRYLDSRPDEQAXGITMKSSAVSLYHEN-----HLINLIDSPGHVDFSSEVCXAVRLSDGALVLIDVVESVQPQTRAVLKQAWVEGIKPILVLNKMDRLILETQMSPLDAYVHLTQIIEXANAIIGELFSASVLEGEEALLDDADDSGIYFSPDAGNVVFASAYHGWAFCINTFAQIYSKKLGFSDKV--LSQTLWGDFYMNTKTQKIMKGALSKAKKPLFVQLILDNIWNIYETISRKDDVKLEKILSSLSLKVHQRDLXSTDIKQRITAVMGQWLPLSKPVLDTVVSHLPSPLQLREDRIEHLMSS---PARPFDS---------LPEKSKRLKSDFLDC-------------SNGEKGVLLRGDSFYDEKSNLRNTPSSIMKATVSSLYLLLGRDLEGLDSAPAGNVIGIGGLEDFILKSATLSS--------NVFCPPFIEMSKSSAPILRVALXPAVSSELNKLVTGLHLLNQADANVQILITDKGEHLLITAGEVHLERCLKDLRETYAGIDINVSEPIVAFRETIVKAPEIDMVNEQIEAETEEKVNNVIDIETPDKQSLIKMRAIPLPSDLIKLLDKRTEFISKVLYNLEDGNVMSNLSKETLRTLQDFQKDLDNLFERDELCRVNNITASRIWAFGPKKTPTNLLFNFLPEYEQIPFSVWDRMISME---SLHKNYVSSFLNGFQLASSAGPLCDEPMRGVGFIVSEWSINSSKDMESSSYGPLSGQIISTVKEGCKSAFQAQPQRLMAGMYTCDIMVKAEXLGKMYAVLGKRHGKVVKEKMIEGSSTFTVTANLPVVESLNFCNVIRKQTSGLAMPQLVFSHWEIIDIDPF 851
BLAST of 116 kda u5 small nuclear ribonucleoprotein component vs. L. salmonis genes
Match: EMLSAG00000008145 (supercontig:LSalAtl2s:LSalAtl2s487:142410:144801:1 gene:EMLSAG00000008145 transcript:EMLSAT00000008145 description:"maker-LSalAtl2s487-augustus-gene-1.18") HSP 1 Score: 93.9745 bits (232), Expect = 6.901e-20 Identity = 49/136 (36.03%), Postives = 80/136 (58.82%), Query Frame = 0
Query: 129 PHLVRNVSLVGHLHHGKSSFVDCLMQETHPDLRTKEDKPLRYTDTLFTEQERGVTIKSMPVTLVLQDLRSKSFLINLFDTPGHVNFSDETTASMRLSDGVVVFVDAAEGVMLNTERLVKHAIQEKLAITVCINKID 264
P +RN+S++ H+ HGKS+ D +++ ++ ++K + D L E+ERG+T+K+ +++ + +LINL DTPGHV+F+ E T S++ GVV+ VDA +GV T A E AI +NK+D
Sbjct: 39 PDYIRNISIIAHVDHGKSTLADRILEYVGAIDKSVDNK--QVLDKLRVERERGITVKAQTASIIYSK-GNMEYLINLIDTPGHVDFASEVTRSLKACQGVVLLVDANQGVQAQTMSNFFAAFSEDKAIIPVLNKVD 171
BLAST of 116 kda u5 small nuclear ribonucleoprotein component vs. L. salmonis genes
Match: EMLSAG00000005476 (supercontig:LSalAtl2s:LSalAtl2s294:457338:461054:1 gene:EMLSAG00000005476 transcript:EMLSAT00000005476 description:"augustus_masked-LSalAtl2s294-processed-gene-4.3") HSP 1 Score: 68.9366 bits (167), Expect = 4.462e-12 Identity = 55/183 (30.05%), Postives = 91/183 (49.73%), Query Frame = 0
Query: 132 VRNVSLVGHLHHGKSSFVDCLMQETHPDLRTKE----DKPLRYTDTLFTEQERGVTIKSMPVTLVLQDLRSKSFLINLFDTPGHVNFSDETTASMRLSDGVVVFVDAAEGVMLNTERLVKHAIQEKLAITVCINKIDK-----------LVLELKLPPIDAYFKLRHIVDEINGLLSLYSEEE 299
+RNV + H+ GK++ + ++ + E D + Y D E+ERG+TI S +T + INL DTPGHV+F+ E S+R+ DG ++ +D + GV T + + A + L V INK+DK L L+L + P+ + + + D ++GL+ L S E+
Sbjct: 49 IRNVGIFAHIDAGKTTTTERMLYYSGFTPSVGEVHTGDTVMDYMDQ---ERERGITITSAAITFPWNKHQ-----INLIDTPGHVDFTLEVERSLRVLDGGILILDGSAGVQAQTVTVCRQAKRYYLPKIVFINKMDKRNANLNKSLDSLELKLGIQPLLTQYPI-YKEDILSGLVDLISMEK 222
BLAST of 116 kda u5 small nuclear ribonucleoprotein component vs. L. salmonis genes
Match: EMLSAG00000011687 (supercontig:LSalAtl2s:LSalAtl2s812:148775:152867:1 gene:EMLSAG00000011687 transcript:EMLSAT00000011687 description:"maker-LSalAtl2s812-augustus-gene-1.59") HSP 1 Score: 61.6178 bits (148), Expect = 7.492e-10 Identity = 39/139 (28.06%), Postives = 73/139 (52.52%), Query Frame = 0
Query: 132 VRNVSLVGHLHHGKSSFVDCLMQETHP-----DLRTKEDKPLRYTDTLFTEQERGVTIKSMPVTLVLQDLRSKSFLINLFDTPGHVNFSDETTASMRLSDGVVVFVDAAEGVMLNTERLVKHAIQEKLAITVCINKIDK 265
+RN+ + H+ GK++ + ++ T +++ K D D++ E+ RG+TI+S + R K + +N+ DTPGHV+F+ E S+R+ DG V+ + A GV T + + + ++ INK+D+
Sbjct: 20 MRNIGISAHIDSGKTTLTERILYYTGRIDCIHEVKGK-DGIGATMDSMELERARGITIQSAATFI-----RWKDYNVNIIDTPGHVDFTIEVERSLRVLDGAVLVLCAVGGVQSQTMTVNRQMKRYRVPSIAFINKLDR 152
BLAST of 116 kda u5 small nuclear ribonucleoprotein component vs. SwissProt
Match: gi|17380352|sp|P13060.4|EF2_DROME (RecName: Full=Elongation factor 2; Short=EF-2) HSP 1 Score: 634.024 bits (1634), Expect = 0.000e+0 Identity = 329/844 (38.98%), Postives = 509/844 (60.31%), Query Frame = 0
Query: 125 LMDNPHLVRNVSLVGHLHHGKSSFVDCLMQETHPDLRTKEDKPLRYTDTLFTEQERGVTIKSMPVTLVLQ----DL-----------RSKSFLINLFDTPGHVNFSDETTASMRLSDGVVVFVDAAEGVMLNTERLVKHAIQEKLAITVCINKIDKLVLELKLPPIDAYFKLRHIVDEINGLLSLYSEEENPQ---KVSPILGNVCFASSQFGFCLTLRSFAQLYSETYGGSIDVSAFAKRLWGDMFFNPKTRKFAKKSPHASAQRSFVEFILEPLYKIFAQVVGDVDTCLPSLCEELGIRLTKEESKMNIRPLLKLICTRFFGDFNGFVEMLAHHVPSPAENAKNKVQHIYTGNLDTVRAEDMINCDQDGRLMVHTTKQYPNDDLTCFHVFGRIMSGTLHSGQEIRLLGENYTIYDEEDSRNMTVGRLWIYEGRYKIEVNRVPAGNWVLIEGIDQPIVKTSTITDLKGGDEDLYIFRPLKFNTQSVIKIAVEPVNPSELPKMLEGLRKVNKSYPLLNTKVEESGEHVVLGTGELYLDCVMHDLRKLYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVAINWNKKRLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLSSEVDKGLLGSVKDSIVQGFQWGTREGPLCEEPIRNGKFKILDAVIASEPIHRGGGQVIPTARRVAYSAFLMATPRLMEPYMFVEVQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDNTCP---------RRTQVREVVPHVDGVLDE 941
LMD +RN+S++ H+ HGKS+ D L+ + K + R+TDT EQER +TIKS +++ + DL K FLINL D+PGHV+FS E TA++R++DG +V VD GV + TE +++ AI E++ + +NK+D+ +LEL+L + Y + IV+ +N +++ Y+++ P +V P G+V F S G+ TL+ F+++YSE + IDV RLWG+ FFN KT+K+ K+ A +RSF +IL+P+YK+F ++ + +L E++G+ L E+ + + LLK + + ++M+A H+PSP K +++ +Y G D A + +CD DG LM++ +K P D F+ FGR+ +G + +GQ+ R++G NYT +ED + R + GRY + VP+GN + G+DQ +VKT TIT K D + + +KF+ V+++AVEP NP++LPK++EGL+++ KS P++ +EESGEH++ G GEL+L+ + DL + ++ I +K +DPVVS+ ETV E S C +++PNK N++ M A P+ GL EDI+N V+ K + KYD+D+ AR IW FGPD TGPN ++D T S + L +KDS+V GFQW ++EG L +E +R +F I D + ++ IHRGGGQ+IPT RR Y+A + A PRLMEP E+Q P V +Y VL RRRGHV ++ V G+P++ +KA++P +SFGF DLR++T GQAF VF HWQ++PGDP + + +R ++E +P + LD+
Sbjct: 12 LMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGAKAGE-TRFTDTRKDEQERCITIKSTAISMYFEVEEKDLVFITHPDQREKECKGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPILFMNKMDRALLELQLDAEELYQTFQRIVENVNVIIATYNDDGGPMGEVRVDPSKGSVGFGSGLHGWAFTLKQFSEMYSEKF--KIDVVKLMNRLWGENFFNAKTKKWQKQK-EADNKRSFCMYILDPIYKVFDAIMNYKKEEIGTLLEKIGVTLKHEDKDKDGKALLKTVMRTWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIAVKSCDPDGPLMMYISKMVPTSDKGRFYAFGRVFAGKVATGQKCRIMGPNYTPGKKEDLYEKAIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFK----DAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRETVSEESDQMCLSKSPNKHNRLLMKALPMPDGLPEDIDNGDVSAKDEFKARARYLSEKYDYDVTEARKIWCFGPDGTGPNFILDCTKSVQ----YLNEIKDSVVAGFQWASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLPDLSQYLDK 843
BLAST of 116 kda u5 small nuclear ribonucleoprotein component vs. SwissProt
Match: gi|88909609|sp|Q3SYU2.3|EF2_BOVIN (RecName: Full=Elongation factor 2; Short=EF-2) HSP 1 Score: 633.639 bits (1633), Expect = 0.000e+0 Identity = 335/855 (39.18%), Postives = 505/855 (59.06%), Query Frame = 0
Query: 125 LMDNPHLVRNVSLVGHLHHGKSSFVDCLMQETHPDLRTKEDKPLRYTDTLFTEQERGVTIKSMPVTL-----------VLQDLRSKSFLINLFDTPGHVNFSDETTASMRLSDGVVVFVDAAEGVMLNTERLVKHAIQEKLAITVCINKIDKLVLELKLPPIDAYFKLRHIVDEINGLLSLYSE-EENPQK---VSPILGNVCFASSQFGFCLTLRSFAQLYSETYGG-----------SIDVSAFAKRLWGDMFFNPKTRKFAKKSPHASAQ---RSFVEFILEPLYKIFAQVVGDVDTCLPSLCEELGIRLTKEESKMNIRPLLKLICTRFFGDFNGFVEMLAHHVPSPAENAKNKVQHIYTGNLDTVRAEDMINCDQDGRLMVHTTKQYPNDDLTCFHVFGRIMSGTLHSGQEIRLLGENYTIYDEEDSRNMTVGRLWIYEGRYKIEVNRVPAGNWVLIEGIDQPIVKTSTITDLKGGDEDLYIFRPLKFNTQSVIKIAVEPVNPSELPKMLEGLRKVNKSYPLLNTKVEESGEHVVLGTGELYLDCVMHDLRKLYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVAINWNKKRLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLSSEVDKGLLGSVKDSIVQGFQWGTREGPLCEEPIRNGKFKILDAVIASEPIHRGGGQVIPTARRVAYSAFLMATPRLMEPYMFVEVQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDNTC---------PRRTQVREVVPHVDGVLDE 941
+MD +RN+S++ H+ HGKS+ D L+ + + + R+TDT EQER +TIKS ++L + Q FLINL D+PGHV+FS E TA++R++DG +V VD GV + TE +++ AI E++ + +NK+D+ +LEL+L P + Y + IV+ +N ++S Y E E P + P+LG V F S G+ TL+ FA++Y + + V K+LWGD +F+P T KF+K + + R+F + IL+P++K+F ++ L E+L I+L E+ +PLLK + R+ + ++M+ H+PSP K + + +Y G D A + +CD G LM++ +K P D F+ FGR+ SG + +G ++R++G NYT +ED + R + GRY + VP GN V + G+DQ +VKT TIT E + R +KF+ V+++AVE NP++LPK++EGL+++ KS P++ +EESGEH++ G GEL+L+ + DL + ++ I IK +DPVVS+ ETV E S++ C +++PNK N++ M A P GLAEDI+ V+ K+ + KY+WD+ AR IW FGPD TGPNIL D T + L +KDS+V GFQW T+EG LCEE +R +F + D + ++ IHRGGGQ+IPTARR Y++ L A PRLMEP VE+Q P V +Y VL R+RGHV ++ V G+P++ +KA++P +SFGF DLR++T GQAF VF HWQI+PGDP DNT +R ++E +P +D LD+
Sbjct: 12 IMDKKANIRNMSVIAHVDHGKSTLTDSLVCKAGI-IASARAGETRFTDTRKDEQERCITIKSTAISLFYELSENDLNFIKQSKDGSGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLMMNKMDRALLELQLEPEELYQTFQRIVENVNVIISTYGEGESGPMGNIMIDPVLGTVGFGSGLHGWAFTLKQFAEMYVAKFAAKGEGQLGPAERAKKVEDMMKKLWGDRYFDPATGKFSKSANSPDGKKLPRTFCQLILDPIFKVFDAIMNFKKEETAKLIEKLDIKLDSEDKDKEGKPLLKAVMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGLVSTGLKVRIMGPNYTPGKKEDLYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTITTF----EHAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQ----YLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEETQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNTSRPSQVVAETRKRKGLKEGIPALDNFLDK 857
BLAST of 116 kda u5 small nuclear ribonucleoprotein component vs. SwissProt
Match: gi|119172|sp|P13639.4|EF2_HUMAN (RecName: Full=Elongation factor 2; Short=EF-2 >gi|88909610|sp|Q5R8Z3.3|EF2_PONAB RecName: Full=Elongation factor 2; Short=EF-2) HSP 1 Score: 630.943 bits (1626), Expect = 0.000e+0 Identity = 333/855 (38.95%), Postives = 505/855 (59.06%), Query Frame = 0
Query: 125 LMDNPHLVRNVSLVGHLHHGKSSFVDCLMQETHPDLRTKEDKPLRYTDTLFTEQERGVTIKSMPVTL-----------VLQDLRSKSFLINLFDTPGHVNFSDETTASMRLSDGVVVFVDAAEGVMLNTERLVKHAIQEKLAITVCINKIDKLVLELKLPPIDAYFKLRHIVDEINGLLSLYSE-EENPQK---VSPILGNVCFASSQFGFCLTLRSFAQLYSETYGG-----------SIDVSAFAKRLWGDMFFNPKTRKFAKKSPHASAQ---RSFVEFILEPLYKIFAQVVGDVDTCLPSLCEELGIRLTKEESKMNIRPLLKLICTRFFGDFNGFVEMLAHHVPSPAENAKNKVQHIYTGNLDTVRAEDMINCDQDGRLMVHTTKQYPNDDLTCFHVFGRIMSGTLHSGQEIRLLGENYTIYDEEDSRNMTVGRLWIYEGRYKIEVNRVPAGNWVLIEGIDQPIVKTSTITDLKGGDEDLYIFRPLKFNTQSVIKIAVEPVNPSELPKMLEGLRKVNKSYPLLNTKVEESGEHVVLGTGELYLDCVMHDLRKLYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVAINWNKKRLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLSSEVDKGLLGSVKDSIVQGFQWGTREGPLCEEPIRNGKFKILDAVIASEPIHRGGGQVIPTARRVAYSAFLMATPRLMEPYMFVEVQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDNTC---------PRRTQVREVVPHVDGVLDE 941
+MD +RN+S++ H+ HGKS+ D L+ + + + R+TDT EQER +TIKS ++L + Q FLINL D+PGHV+FS E TA++R++DG +V VD GV + TE +++ AI E++ + +NK+D+ +LEL+L P + Y + IV+ +N ++S Y E E P + P+LG V F S G+ TL+ FA++Y + + V K+LWGD +F+P KF+K + + R+F + IL+P++K+F ++ L E+L I+L E+ +PLLK + R+ + ++M+ H+PSP K + + +Y G D A + +CD G LM++ +K P D F+ FGR+ SG + +G ++R++G NYT +ED + R + GRY + VP GN V + G+DQ +VKT TIT E + R +KF+ V+++AVE NP++LPK++EGL+++ KS P++ +EESGEH++ G GEL+L+ + DL + ++ I IK +DPVVS+ ETV E S++ C +++PNK N++ M A P GLAEDI+ V+ K+ + KY+WD+ AR IW FGPD TGPNIL D T + L +KDS+V GFQW T+EG LCEE +R +F + D + ++ IHRGGGQ+IPTARR Y++ L A PRLMEP VE+Q P V +Y VL R+RGHV +++ V G+P++ +KA++P +SFGF DLR++T GQAF VF HWQI+PGDP DN+ +R ++E +P +D LD+
Sbjct: 12 IMDKKANIRNMSVIAHVDHGKSTLTDSLVCKAGI-IASARAGETRFTDTRKDEQERCITIKSTAISLFYELSENDLNFIKQSKDGAGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLMMNKMDRALLELQLEPEELYQTFQRIVENVNVIISTYGEGESGPMGNIMIDPVLGTVGFGSGLHGWAFTLKQFAEMYVAKFAAKGEGQLGPAERAKKVEDMMKKLWGDRYFDPANGKFSKSATSPEGKKLPRTFCQLILDPIFKVFDAIMNFKKEETAKLIEKLDIKLDSEDKDKEGKPLLKAVMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGLVSTGLKVRIMGPNYTPGKKEDLYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTITTF----EHAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQ----YLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDK 857
BLAST of 116 kda u5 small nuclear ribonucleoprotein component vs. SwissProt
Match: gi|18202285|sp|P58252.2|EF2_MOUSE (RecName: Full=Elongation factor 2; Short=EF-2) HSP 1 Score: 630.943 bits (1626), Expect = 0.000e+0 Identity = 335/855 (39.18%), Postives = 506/855 (59.18%), Query Frame = 0
Query: 125 LMDNPHLVRNVSLVGHLHHGKSSFVDCLMQETHPDLRTKEDKPLRYTDTLFTEQERGVTIKSMPVTL-----------VLQDLRSKSFLINLFDTPGHVNFSDETTASMRLSDGVVVFVDAAEGVMLNTERLVKHAIQEKLAITVCINKIDKLVLELKLPPIDAYFKLRHIVDEINGLLSLYSE-EENPQK---VSPILGNVCFASSQFGFCLTLRSFAQLYSETYG--GSIDVSA---------FAKRLWGDMFFNPKTRKFAKKSPHASAQ---RSFVEFILEPLYKIFAQVVGDVDTCLPSLCEELGIRLTKEESKMNIRPLLKLICTRFFGDFNGFVEMLAHHVPSPAENAKNKVQHIYTGNLDTVRAEDMINCDQDGRLMVHTTKQYPNDDLTCFHVFGRIMSGTLHSGQEIRLLGENYTIYDEEDSRNMTVGRLWIYEGRYKIEVNRVPAGNWVLIEGIDQPIVKTSTITDLKGGDEDLYIFRPLKFNTQSVIKIAVEPVNPSELPKMLEGLRKVNKSYPLLNTKVEESGEHVVLGTGELYLDCVMHDLRKLYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVAINWNKKRLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLSSEVDKGLLGSVKDSIVQGFQWGTREGPLCEEPIRNGKFKILDAVIASEPIHRGGGQVIPTARRVAYSAFLMATPRLMEPYMFVEVQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDNTC---------PRRTQVREVVPHVDGVLDE 941
+MD +RN+S++ H+ HGKS+ D L+ + + + R+TDT EQER +TIKS ++L + Q FLINL D+PGHV+FS E TA++R++DG +V VD GV + TE +++ AI E++ + +NK+D+ +LEL+L P + Y + IV+ +N ++S Y E E P + P+LG V F S G+ TL+ FA++Y + G +SA K+LWGD +F+P KF+K + + R+F + IL+P++K+F ++ L E+L I+L E+ +PLLK + R+ + ++M+ H+PSP K + + +Y G D A + +CD G LM++ +K P D F+ FGR+ SG + +G ++R++G NYT +ED + R + GRY + VP GN V + G+DQ +VKT TIT E + R +KF+ V+++AVE NP++LPK++EGL+++ KS P++ +EESGEH++ G GEL+L+ + DL + ++ I IK +DPVVS+ ETV E S++ C +++PNK N++ M A P GLAEDI+ V+ K + KY+WD+ AR IW FGPD TGPNIL D T + L +KDS+V GFQW T+EG LCEE +R +F + D + ++ IHRGGGQ+IPTARR Y++ L A PRLMEP VE+Q P V +Y VL R+RGHV +++ V G+P++ +KA++P +SFGF DLR++T GQAF VF HWQI+PGDP DN+ +R ++E +P +D LD+
Sbjct: 12 IMDKKANIRNMSVIAHVDHGKSTLTDSLVCKAGI-IASARAGETRFTDTRKDEQERCITIKSTAISLFYELSENDLNFIKQSKDGSGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLMMNKMDRALLELQLEPEELYQTFQRIVENVNVIISTYGEGESGPMGNIMIDPVLGTVGFGSGLHGWAFTLKQFAEMYVAKFAAKGEGQLSAAERAKKVEDMMKKLWGDRYFDPANGKFSKSANSPDGKKLPRTFCQLILDPIFKVFDAIMNFRKEETAKLIEKLDIKLDSEDKDKEGKPLLKAVMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGVVSTGLKVRIMGPNYTPGKKEDLYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTITTF----EHAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQ----YLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDK 857
BLAST of 116 kda u5 small nuclear ribonucleoprotein component vs. SwissProt
Match: gi|119176|sp|P05197.4|EF2_RAT (RecName: Full=Elongation factor 2; Short=EF-2) HSP 1 Score: 630.558 bits (1625), Expect = 0.000e+0 Identity = 333/855 (38.95%), Postives = 504/855 (58.95%), Query Frame = 0
Query: 125 LMDNPHLVRNVSLVGHLHHGKSSFVDCLMQETHPDLRTKEDKPLRYTDTLFTEQERGVTIKSMPVTL-----------VLQDLRSKSFLINLFDTPGHVNFSDETTASMRLSDGVVVFVDAAEGVMLNTERLVKHAIQEKLAITVCINKIDKLVLELKLPPIDAYFKLRHIVDEINGLLSLYSE-EENPQK---VSPILGNVCFASSQFGFCLTLRSFAQLYSETYGG-----------SIDVSAFAKRLWGDMFFNPKTRKFAKKSPHASAQ---RSFVEFILEPLYKIFAQVVGDVDTCLPSLCEELGIRLTKEESKMNIRPLLKLICTRFFGDFNGFVEMLAHHVPSPAENAKNKVQHIYTGNLDTVRAEDMINCDQDGRLMVHTTKQYPNDDLTCFHVFGRIMSGTLHSGQEIRLLGENYTIYDEEDSRNMTVGRLWIYEGRYKIEVNRVPAGNWVLIEGIDQPIVKTSTITDLKGGDEDLYIFRPLKFNTQSVIKIAVEPVNPSELPKMLEGLRKVNKSYPLLNTKVEESGEHVVLGTGELYLDCVMHDLRKLYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVAINWNKKRLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLSSEVDKGLLGSVKDSIVQGFQWGTREGPLCEEPIRNGKFKILDAVIASEPIHRGGGQVIPTARRVAYSAFLMATPRLMEPYMFVEVQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDNTC---------PRRTQVREVVPHVDGVLDE 941
+MD +RN+S++ H+ HGKS+ D L+ + + + R+TDT EQER +TIKS ++L + Q FLINL D+PGHV+FS E TA++R++DG +V VD GV + TE +++ AI E++ + +NK+D+ +LEL+L P + Y + IV+ +N ++S Y E E P + P+LG V F S G+ TL+ FA++Y + + V K+LWGD +F+P KF+K + + R+F + IL+P++K+F ++ L E+L I+L E+ +PLLK + R+ + ++M+ H+PSP K + + +Y G D A + +CD G LM++ +K P D F+ FGR+ SG + +G ++R++G NYT +ED + R + GRY + VP GN V + G+DQ +VKT TIT E + R +KF+ V+++AVE NP++LPK++EGL+++ KS P++ +EESGEH++ G GEL+L+ + DL + ++ I IK +DPVVS+ ETV E S++ C +++PNK N++ M A P GLAEDI+ V+ K + KY+WD+ AR IW FGPD TGPNIL D T + L +KDS+V GFQW T+EG LCEE +R +F + D + ++ IHRGGGQ+IPTARR Y++ L A PRLMEP VE+Q P V +Y VL R+RGHV +++ V G+P++ +KA++P +SFGF DLR++T GQAF VF HWQI+PGDP DN+ +R ++E +P +D LD+
Sbjct: 12 IMDKKANIRNMSVIAHVDHGKSTLTDSLVCKAGI-IASARAGETRFTDTRKDEQERCITIKSTAISLFYELSENDLNFIKQSKDGSGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLMMNKMDRALLELQLEPEELYQTFQRIVENVNVIISTYGEGESGPMGNIMIDPVLGTVGFGSGLHGWAFTLKQFAEMYVAKFAAKGEGQLGAAERAKKVEDMMKKLWGDRYFDPANGKFSKSANSPDGKKLPRTFCQLILDPIFKVFDAIMNFRKEETAKLIEKLDIKLDSEDKDKEGKPLLKAVMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGVVSTGLKVRIMGPNYTPGKKEDLYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTITTF----EHAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQ----YLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDK 857
BLAST of 116 kda u5 small nuclear ribonucleoprotein component vs. SwissProt
Match: gi|3123205|sp|P29691.4|EF2_CAEEL (RecName: Full=Elongation factor 2; Short=EF-2) HSP 1 Score: 629.787 bits (1623), Expect = 0.000e+0 Identity = 330/854 (38.64%), Postives = 512/854 (59.95%), Query Frame = 0
Query: 125 LMDNPHLVRNVSLVGHLHHGKSSFVDCLMQETHPDLRTKEDKPLRYTDTLFTEQERGVTIKSMPVTLVLQ----DL-------------------RSKSFLINLFDTPGHVNFSDETTASMRLSDGVVVFVDAAEGVMLNTERLVKHAIQEKLAITVCINKIDKLVLELKLPPIDAYFKLRHIVDEINGLLSLYSEEENPQK---VSPILGNVCFASSQFGFCLTLRSFAQLYSETYGGSIDVSAFAKRLWGDMFFNPKTRKFAKKSPHASAQRSFVEFILEPLYKIFAQVVGDVDTCLPSLCEELGIRLTKEESKMNIRPLLKLICTRFFGDFNGFVEMLAHHVPSPAENAKNKVQHIYTGNLDTVRAEDMINCDQDGRLMVHTTKQYPNDDLTCFHVFGRIMSGTLHSGQEIRLLGENYTIYDEEDSRNMTVGRLWIYEGRYKIEVNRVPAGNWVLIEGIDQPIVKTSTITDLKGGDEDLYIFRPLKFNTQSVIKIAVEPVNPSELPKMLEGLRKVNKSYPLLNTKVEESGEHVVLGTGELYLDCVMHDLRKLYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVAINWNKKRLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLSSEVDKGL--LGSVKDSIVQGFQWGTREGPLCEEPIRNGKFKILDAVIASEPIHRGGGQVIPTARRVAYSAFLMATPRLMEPYMFVEVQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLD-NTCP--------RRTQVREVVPHVDGVLDE 941
LMD +RN+S++ H+ HGKS+ D L+ + +K + R+TDT EQER +TIKS ++L + DL + FLINL D+PGHV+FS E TA++R++DG +V VD GV + TE +++ AI E++ + +NK+D+ +LEL+L + + + IV+ IN +++ Y +++ P V P +GNV F S G+ TL+ FA++Y+ +G + V K LWGD FF+ KT+K++ S +R F +F+L+P++ +F V+ +L E+LGI+L +E + +PL+K+ ++ + ++M+A H+PSP K +++ +Y G D A + CD +G LM++ +K P D F+ FGR+ SG + +G + R+ G NY +ED T+ R + GR+ + +P+GN + G+DQ +VK TIT K D + R +KF+ V+++AVE NP++LPK++EGL+++ KS P++ EESGEH++ G GEL+L+ + DL + ++ I +K +DPVVS+ ETV S+ C +++PNK N++ A+P+ GLA+DIE V K + KY++D+ AR IW FGPD TGPN+L+D V KG+ L +KDS+V GFQW TREG L +E +R +F + D + ++ IHRGGGQ+IPTARRV Y++ L A PRL+EP VE+Q P V +Y VL RRRGHV +++ V G+P++ +KA++P +SFGF DLR++T GQAF VF HWQ++PGDPL+ T P +R ++E VP +D LD+
Sbjct: 12 LMDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGET-RFTDTRKDEQERCITIKSTAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLFMNKMDRALLELQLGAEELFQTFQRIVENINVIIATYGDDDGPMGPIMVDPSIGNVGFGSGLHGWAFTLKQFAEMYAGKFG--VQVDKLMKNLWGDRFFDLKTKKWSSTQTDES-KRGFCQFVLDPIFMVFDAVMNIKKDKTAALVEKLGIKLANDEKDLEGKPLMKVFMRKWLPAGDTMLQMIAFHLPSPVTAQKYRMEMLYEGPHDDEAAVAIKTCDPNGPLMMYISKMVPTSDKGRFYAFGRVFSGKVATGMKARIQGPNYVPGKKEDLYEKTIQRTILMMGRFIEPIEDIPSGNIAGLVGVDQYLVKGGTITTYK----DAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIFEESGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRETVQSESNQICLSKSPNKHNRLHCTAQPMPDGLADDIEGGTVNARDEFKARAKILAEKYEYDVTEARKIWCFGPDGTGPNLLMD------VTKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVPALDNYLDK 851
BLAST of 116 kda u5 small nuclear ribonucleoprotein component vs. SwissProt
Match: gi|298286925|sp|P09445.4|EF2_CRIGR (RecName: Full=Elongation factor 2; Short=EF-2) HSP 1 Score: 629.787 bits (1623), Expect = 0.000e+0 Identity = 333/855 (38.95%), Postives = 504/855 (58.95%), Query Frame = 0
Query: 125 LMDNPHLVRNVSLVGHLHHGKSSFVDCLMQETHPDLRTKEDKPLRYTDTLFTEQERGVTIKSMPVTL-----------VLQDLRSKSFLINLFDTPGHVNFSDETTASMRLSDGVVVFVDAAEGVMLNTERLVKHAIQEKLAITVCINKIDKLVLELKLPPIDAYFKLRHIVDEINGLLSLYSE-EENPQK---VSPILGNVCFASSQFGFCLTLRSFAQLYSETYGG-----------SIDVSAFAKRLWGDMFFNPKTRKFAKKSPHASAQ---RSFVEFILEPLYKIFAQVVGDVDTCLPSLCEELGIRLTKEESKMNIRPLLKLICTRFFGDFNGFVEMLAHHVPSPAENAKNKVQHIYTGNLDTVRAEDMINCDQDGRLMVHTTKQYPNDDLTCFHVFGRIMSGTLHSGQEIRLLGENYTIYDEEDSRNMTVGRLWIYEGRYKIEVNRVPAGNWVLIEGIDQPIVKTSTITDLKGGDEDLYIFRPLKFNTQSVIKIAVEPVNPSELPKMLEGLRKVNKSYPLLNTKVEESGEHVVLGTGELYLDCVMHDLRKLYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVAINWNKKRLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLSSEVDKGLLGSVKDSIVQGFQWGTREGPLCEEPIRNGKFKILDAVIASEPIHRGGGQVIPTARRVAYSAFLMATPRLMEPYMFVEVQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDNTC---------PRRTQVREVVPHVDGVLDE 941
+MD +RN+S++ H+ HGKS+ D L+ + + + R+TDT EQER +TIKS ++L + Q FLINL D+PGHV+FS E TA++R++DG +V VD GV + TE +++ AI E++ + +NK+D+ +LEL+L P + Y + IV+ +N ++S Y E E P + P+LG V F S G+ TL+ FA++Y + + V K+LWGD +F+P KF+K + + R+F + IL+P++K+F ++ L E+L I+L E+ +PLLK + R+ + ++M+ H+PSP K + + +Y G D A + +CD G LM++ +K P D F+ FGR+ SG + +G ++R++G NYT +ED + R + GRY + VP GN V + G+DQ +VKT TIT E + R +KF+ V+++AVE NP++LPK++EGL+++ KS P++ +EESGEH++ G GEL+L+ + DL + ++ I IK +DPVVS+ ETV E S++ C +++PNK N++ M A P GLAEDI+ V+ K + KY+WD+ AR IW FGPD TGPNIL D T + L +KDS+V GFQW T+EG LCEE +R +F + D + ++ IHRGGGQ+IPTARR Y++ L A PRLMEP VE+Q P V +Y VL R+RGHV +++ V G+P++ +KA++P +SFGF DLR++T GQAF VF HWQI+PGDP DN+ +R ++E +P +D LD+
Sbjct: 12 IMDKEANIRNMSVIAHVDHGKSTLTDSLVCKAGI-IASARAGETRFTDTRKDEQERCITIKSTAISLFYELSENDLNFIKQSKDGSGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLMMNKMDRALLELQLEPEELYQTFQRIVENVNVIISTYGEGESGPMGNIMIDPVLGTVGFGSGLHGWAFTLKQFAEMYVAKFAAKGEGQLGPAERAKKVEDMMKKLWGDRYFDPANGKFSKSANSPDGKKLPRTFCQLILDPIFKVFDPIMNFRKEETAKLIEKLDIKLDSEDKDKEGKPLLKAVMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGVVSTGLKVRIMGPNYTPGKKEDLYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTITTF----EHAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQ----YLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRGSQVVAETRKRKGLKEGIPALDNFLDK 857
BLAST of 116 kda u5 small nuclear ribonucleoprotein component vs. SwissProt
Match: gi|3122059|sp|Q23716.1|EF2_CRYPV (RecName: Full=Elongation factor 2; Short=EF-2) HSP 1 Score: 625.55 bits (1612), Expect = 0.000e+0 Identity = 322/841 (38.29%), Postives = 505/841 (60.05%), Query Frame = 0
Query: 116 SYDAEFLADLMDNPHLVRNVSLVGHLHHGKSSFVDCLMQETHPDLRTKEDKPLRYTDTLFTEQERGVTIKSMPVTLV----LQDLRSKS-FLINLFDTPGHVNFSDETTASMRLSDGVVVFVDAAEGVMLNTERLVKHAIQEKLAITVCINKIDKLVLELKLPPIDAYFKLRHIVDEINGLLSLYSEE-ENPQKVSPILGNVCFASSQFGFCLTLRSFAQLYSETYGGSIDVSAFAKRLWGDMFFNPKTRKFAKKSPHASAQRSFVEFILEPLYKIFAQVVGDVDTCLPSLCEELGIRLTKEESKMNIRPLLKLICTRFFGDFNGFVEMLAHHVPSPAENAKNKVQHIYTGNLDTVRAEDMINCDQDGRLMVHTTKQYPNDDLTCFHVFGRIMSGTLHSGQEIRLLGENYTIYDEEDSRNMTVGRLWIYEGRYKIEVNRVPAGNWVLIEGIDQPIVKTSTITDLKGGDEDLYIFRPLKFNTQSVIKIAVEPVNPSELPKMLEGLRKVNKSYPLLNTKVEESGEHVVLGTGELYLDCVMHDLRKLYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVAINWNKKRLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLSSEVDKGLLGSVKDSIVQGFQWGTREGPLCEEPIRNGKFKILDAVIASEPIHRGGGQVIPTARRVAYSAFLMATPRLMEPYMFVEVQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLD---------NTCPRRTQVREVVPHVDGVLDE 941
++ E + ++M PH +RN+S++ H+ HGKS+ D L+ + + +K R+TDT EQER +TIKS ++L L+D + + FLINL D+PGHV+FS E TA++R++DG +V VDA +GV + TE +++ A+ E++ + +NK+D+ +LEL+ D Y +++ +N ++S YS+E +V P G V F S G+ T+ FA++Y++ +G ++ S +RLWGD FFNP+T+KF K + ++R+F +FI+EP+ ++F+ ++ + LG+ L ++ + +PLLK + + + +EM+ H+PSPA K +V+++Y G D A+ + NCD D L + +K P D F+ FGR+ SGT+ +GQ++R+ G Y +ED + R + GRY ++ VPAGN V + GIDQ ++K+ TIT E + +K++ V+++AV P + ELPK++EGL+K++KS PL+ EE+GEH++ G GEL+++ + DL++ Y++I+I +DP+VS+ ETVV S+ C +++PNK N++ M AEPL GL +DIE V+ + K KY +D AA IW FGP+ TGPNI+VD T + L +KD FQW T+EG LCEE +R +F +LD + ++ IHRG GQ+ PT RRV Y+A L A+PRL+EP VE+ AP + V +Y L +RRGHV + P G+P IKA++P DSF F T LR T G+AF VF HW+++ GDPL+ RR ++E +P +D LD+
Sbjct: 3 NFTVEQIREIMGKPHNIRNMSVIAHVDHGKSTLTDSLVCKAGI-IASKAAGDARFTDTRADEQERCITIKSTGISLFFEHDLEDGKGRQPFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDAVDGVCIQTETVLRQALNERIRPVLHVNKVDRALLELQWEAEDIYQNFTRVIENVNVIISTYSDELMGDVQVFPEKGTVSFGSGLHGWAFTIEKFARIYAKKFG--VEKSKMMQRLWGDNFFNPETKKFTK-TQEPGSKRAFCQFIMEPICQLFSSIMNGDKAKYEKMLVNLGVELKGDDKALVDKPLLKKVMQLWLSAGDTLLEMIVTHLPSPAAAQKYRVENLYEGPQDDETAKGIRNCDPDAPLCMFVSKMVPTSDKGRFYAFGRVFSGTVATGQKVRIQGPRYVPGGKEDLNIKNIQRTVLMMGRYVEQIPDVPAGNTVGLVGIDQYLLKSGTITT----SETAHNIASMKYSVSPVVRVAVRPKDNKELPKLVEGLKKLSKSDPLVVCSKEETGEHIIAGCGELHVEICLQDLQQEYAQIEIVASDPIVSYRETVVNLSNQTCLSKSPNKHNRLYMTAEPLPDGLTDDIEEGKVSPRDDPKERSNLLHDKYGFDKNAAMKIWCFGPETTGPNIMVDVTTGIQ----YLTEIKDHCNSAFQWATKEGILCEEDMRGIRFNLLDVTLHADAIHRGAGQITPTCRRVMYAAALTASPRLLEPMFLVEISAPQEVVGGIYATLNQRRGHVFHEEPKSGTPQVEIKAYLPVADSFKFTTVLRAATSGKAFPQCVFDHWELINGDPLEKGSKTEELVKAIRRRKNIKEEIPALDNYLDK 831
BLAST of 116 kda u5 small nuclear ribonucleoprotein component vs. SwissProt
Match: gi|189045117|sp|Q96X45.3|EF2_NEUCR (RecName: Full=Elongation factor 2; Short=EF-2; AltName: Full=Colonial temperature-sensitive 3) HSP 1 Score: 619.772 bits (1597), Expect = 0.000e+0 Identity = 326/824 (39.56%), Postives = 494/824 (59.95%), Query Frame = 0
Query: 125 LMDNPHLVRNVSLVGHLHHGKSSFVDCLMQETHPDLRTKEDKPLRYTDTLFTEQERGVTIKSMPVTL-------------VLQDLRSKSFLINLFDTPGHVNFSDETTASMRLSDGVVVFVDAAEGVMLNTERLVKHAIQEKLAITVCINKIDKLVLELKLPPIDAYFKLRHIVDEINGLLSLYSEEE-NPQKVSPILGNVCFASSQFGFCLTLRSFAQLYSETYGGSIDVSAFAKRLWGDMFFNPKTRKFAKKSPHASAQ--RSFVEFILEPLYKIFAQVVGDVDTCLPSLCEELGIRLTKEESKMNIRPLLKLICTRFFGDFNGFVEMLAHHVPSPAENAKNKVQHIYTGNLDTVRAEDMINCDQDGRLMVHTTKQYPNDDLTCFHVFGRIMSGTLHSGQEIRLLGENYTIYDEEDSRNMTVGRLWIYEGRYKIEVNRVPAGNWVLIEGIDQPIVKTSTITDLKGGDEDLYIFRPLKFNTQSVIKIAVEPVNPSELPKMLEGLRKVNKSYPLLNTKVEESGEHVVLGTGELYLDCVMHDLRKLYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVAINWNKKRLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLSSEVDKGLLGSVKDSIVQGFQWGTREGPLCEEPIRNGKFKILDAVIASEPIHRGGGQVIPTARRVAYSAFLMATPRLMEPYMFVEVQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVP-GDPLDNTCPRRTQVREV 931
LMD P VRN+S++ H+ HGKS+ D L+ + + + + R TDT EQERG+TIKS ++L V Q K FLINL D+PGHV+FS E TA++R++DG +V VD EGV + TE +++ A+ E++ V INK+D+ +LEL++ D Y ++ +N ++S Y ++ +V P G V F S G+ T+R FA Y++ +G +D + +RLWGD +FNPKT+K+ K + + R+F +FIL+P++KIF+ V+ + +L E+L ++L ++ + + LLK + F + +EM+ H+PSP + + +Y G D A + CD G LM++ +K P D F+ FGR+ +GT+ SG ++R+ G NYT +ED + R + G ++ +PAGN V + GIDQ ++K+ T+T E + + +KF+ V++ +V+ N +LPK++EGL++++KS P + T ESGEHVV G GEL+L+ ++DL ++ + + ++DPVV + ETV SS+ +++PNK N++ M+AEPLE+ L IE + + K + WD+ AR IWAFGPD G N+LVD T + + L +KDS+V GFQW TREGP+ EEP+R+ +F ILD + ++ IHRGGGQ+IPTARRV Y+A L+A P L+EP VE+Q P + VY VL RRRGHV + PG+PL+TIKA++P ++SFGF DLR T GQAF SVF HW+ +P G PLD+T V+E+
Sbjct: 12 LMDKPTNVRNMSVIAHVDHGKSTLTDSLLAKAGI-ISSGKAGEARATDTRADEQERGITIKSTAISLYGTLPDEEDIKDIVGQKTDGKDFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTVEGVCVQTETVLRQALGERIKPVVVINKVDRALLELQVSKEDLYQSFSRTIESVNVIISTYFDKSLGDVQVYPDRGTVAFGSGLHGWAFTIRQFATRYAKKFG--VDRNKMMERLWGDNYFNPKTKKWTKNGTYEGKELERAFNQFILDPIFKIFSAVMNFKKDEVAALLEKLNLKLATDDREKEGKQLLKAVMKAFLPAADCLLEMMILHLPSPVTAQAYRAETLYEGPQDDEAAMAIKTCDPKGPLMLYVSKMVPTSDKGRFYAFGRVFAGTVRSGLKVRIQGPNYTPGKKEDLFIKAIQRTVLMMGGKVEPIDDMPAGNIVGLVGIDQFLLKSGTLTT----SETAHNMKVMKFSVSPVVQRSVQVKNAQDLPKLVEGLKRLSKSDPCVLTFSNESGEHVVAGAGELHLEICLNDLENDHAGVPLTISDPVVQYRETVAGKSSMTALSKSPNKHNRLYMVAEPLEEDLCLAIEAGKITPRDDFKARARILADDFGWDVTDARKIWAFGPDTNGANLLVDQTKAVQ----YLNEIKDSVVSGFQWATREGPIGEEPMRSIRFNILDVTLHADAIHRGGGQIIPTARRVLYAATLLAEPSLLEPVFLVEIQVPEQAMGGVYGVLTRRRGHVFGEEQRPGTPLFTIKAYLPVMESFGFNGDLRAATSGQAFPQSVFDHWERLPGGSPLDSTSKVGQIVQEM 824
BLAST of 116 kda u5 small nuclear ribonucleoprotein component vs. SwissProt
Match: gi|6015065|sp|O23755.1|EF2_BETVU (RecName: Full=Elongation factor 2; Short=EF-2) HSP 1 Score: 619.002 bits (1595), Expect = 0.000e+0 Identity = 321/829 (38.72%), Postives = 508/829 (61.28%), Query Frame = 0
Query: 117 YDAEFLADLMDNPHLVRNVSLVGHLHHGKSSFVDCLM-------QETHPDLRTKEDKPLRYTDTLFTEQERGVTIKSMPVTLVLQ-----------DLRSKSFLINLFDTPGHVNFSDETTASMRLSDGVVVFVDAAEGVMLNTERLVKHAIQEKLAITVCINKIDKLVLELKLPPIDAYFKLRHIVDEINGLLSLYSEEENPQ----KVSPILGNVCFASSQFGFCLTLRSFAQLYSETYGGSIDVSAFAKRLWGDMFFNPKTRKFA-KKSPHASAQRSFVEFILEPLYKIFAQVVGDVDTCLPSLCEELGIRLTKEESKMNIRPLLKLICTRFFGDFNGFVEMLAHHVPSPAENAKNKVQHIYTGNLDTVRAEDMINCDQDGRLMVHTTKQYPNDDLTCFHVFGRIMSGTLHSGQEIRLLGENYTIYDEEDSRNMTVGRLWIYEGRYKIEVNRVPAGNWVLIEGIDQPIVKTSTITDLKGGDEDLYIFRPLKFNTQSVIKIAVEPVNPSELPKMLEGLRKVNKSYPLLNTKVEESGEHVVLGTGELYLDCVMHDLRK-LYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVAINWNKKRLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLSSEVDKGL--LGSVKDSIVQGFQWGTREGPLCEEPIRNGKFKILDAVIASEPIHRGGGQVIPTARRVAYSAFLMATPRLMEPYMFVEVQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLD 919
+ A+ L +MD H +RN+S++ H+ HGKS+ D L+ QE D+R TDT E ERG+TIKS ++L Q + + +LINL D+PGHV+FS E TA++R++DG +V VD EGV + TE +++ A+ E++ + +NK+D+ LEL++ +AY + +++ N +++ Y E+P +V P G V F++ G+ TL +FA++Y+ +G +D S +RLWG+ FF+P T+K+ K S +AS +R FV+F EP+ +I A + D L + +LGI++ EE + RPL+K + + + +EM+ HH+PSPA + +V+++Y G +D V A + NCD +G LM++ +K P D F FGR+ +G + +G ++R++G NY +++D V R I+ G+ + V VP GN V + G+DQ I K +T+T+ K + D + R +KF+ V+++AV+ S+LPK++EGL+++ KS P++ +EESGEH++ G GEL+L+ + DL+ +I +DPVVSF ETV++ S +++PNK N++ M A P+E+GLAE I+ + + K + +Y WD A+ IW FGP+ TGPN++VD + KG+ L +KDS+V GFQW ++EG L EE +R F++ D V+ ++ IHRGGGQ+IPTARRV Y++ L A PRL+EP VE+QAP + + +Y+VL ++RGHV ++ PG+PLY IKA++P ++SFGF + LR T GQAF VF HW+++P DPL+
Sbjct: 4 FTADELRAIMDCKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRM--------TDTRADEAERGITIKSTGISLYYQMTDEALQSYKGERKGNDYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYTTFQKVIENANVIMATY---EDPLLGDVQVYPEKGTVAFSAGLHGWAFTLSNFAKMYASKFG--VDESKMMERLWGENFFDPATKKWTTKNSGNASCKRGFVQFCYEPIKQIIAACMNDQKDKLLAHVTKLGIQMKTEEKDLMGRPLMKRVMQTWLPASSALLEMMIHHLPSPATAQRYRVENLYEGPMDDVYATAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFAGKVSTGMKVRIMGPNYVPGEKKDLYVKNVQRTVIWMGKKQETVEDVPCGNTVALVGLDQYITKNATLTNEK--ESDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSIEESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLDRSVRTVMSKSPNKHNRLYMEARPMEEGLAEAIDEGRIGPRDDPKNRSKILAEEYGWDKDLAKKIWCFGPETTGPNMVVD------MCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHTDAIHRGGGQIIPTARRVFYASQLTAKPRLLEPVYLVEIQAPENALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRASTSGQAFPQCVFDHWEMMPSDPLE 811
BLAST of 116 kda u5 small nuclear ribonucleoprotein component vs. nr
Match: gi|1325267413|ref|XP_023341156.1| (116 kDa U5 small nuclear ribonucleoprotein component-like [Eurytemora affinis]) HSP 1 Score: 1574.68 bits (4076), Expect = 0.000e+0 Identity = 753/925 (81.41%), Postives = 842/925 (91.03%), Query Frame = 0
Query: 1 MDPDYYDEFGNYIGPDLESEESSEDEAEAGALGEAGGSEVVAGEDQLEDEDEAGVSSTAVVLHEDKKYYPTAMEVFGPEVETLVQEEDAQPLTEPIIAPVKRNKFQHVEQELPETSYDAEFLADLMDNPHLVRNVSLVGHLHHGKSSFVDCLMQETHPDLRTKEDKPLRYTDTLFTEQERGVTIKSMPVTLVLQDLRSKSFLINLFDTPGHVNFSDETTASMRLSDGVVVFVDAAEGVMLNTERLVKHAIQEKLAITVCINKIDKLVLELKLPPIDAYFKLRHIVDEINGLLSLYSEEENPQKVSPILGNVCFASSQFGFCLTLRSFAQLYSETYGGSIDVSAFAKRLWGDMFFNPKTRKFAKKSPHASAQRSFVEFILEPLYKIFAQVVGDVDTCLPSLCEELGIRLTKEESKMNIRPLLKLICTRFFGDFNGFVEMLAHHVPSPAENAKNKVQHIYTGNLDTVRAEDMINCDQDGRLMVHTTKQYPNDDLTCFHVFGRIMSGTLHSGQEIRLLGENYTIYDEEDSRNMTVGRLWIYEGRYKIEVNRVPAGNWVLIEGIDQPIVKTSTITDLKGGDEDLYIFRPLKFNTQSVIKIAVEPVNPSELPKMLEGLRKVNKSYPLLNTKVEESGEHVVLGTGELYLDCVMHDLRKLYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVAINWNKKRLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLSSEVDKGLLGSVKDSIVQGFQWGTREGPLCEEPIRNGKFKILDAVIASEPIHRGGGQVIPTARRVAYSAFLMATPRLMEPYMFVEVQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDNTCPRR 925
MDPD YDEFGNY+GPDLESEE S + E E + G+++ ++EDE S A+VLHEDKKYYPTA EVFGP VET+V EED QP+T+PII PVK+NKF+HVEQELP T+Y EFLADLMDN +L+RNV+LVGHLHHGK+SFVDCLMQ+THPDL++K+DKP+RYTDTLFTEQERGV+IK+MPV+LV QD+R KSFL+N+FDTPGHVNFSDE TASMRL+DGV VF+DAAEGVMLNTER++K A+QEKLA+TVCINKID+L+LELKLPP DAY+KLRHIV+E+NGL+SLYSE+E+ Q +SPI GNVCFASSQ+G C TL+SFA LY+ TYG +I+V+ FA+RLWGD++FN KTRKF+KK PH SAQRSFVEFILEPLYK+FA VVGDVDTCLP LC+ELG+RLTKEESKMNIRPLL+LIC+RF G+F GF +M H+PSP +NAK KV IY+G +T R EDM+ CDQDGRLMVHTTKQYP +D TCFHV GR+MSGTLHSGQEIRLLGENYT++DEEDSR++ VGRLWIYE RYKIEVNRVPAGNWVLIEGIDQ IVKTSTITDL+G +E+LYIFRPLKFNTQSVIKIAVEPVNPSELPKML+GLRKVNKSYPLL+T+VEESGEHV+LGTGELYLDCVMHDLRKLYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNK+TMIAEPLEKGL+EDIENEVV+I WNKKRLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTL SEVDKGLLGSVK+SIVQGFQWGTREGPLCEEPIRN KFKILDAVIA+EPIHRGGGQ+IPT+RRVAYSAFLMATPRLMEPY+FVEV APADCVSAVYTVLARRRGHVTQDAPVPGSPLY IKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLD + R
Sbjct: 1 MDPDLYDEFGNYVGPDLESEEDSSSDEEKDRDEEEA----MQGDEEQDEEDEPSAQSMAIVLHEDKKYYPTAGEVFGPGVETIVHEEDTQPITKPIIEPVKKNKFEHVEQELPRTTYQIEFLADLMDNSNLIRNVALVGHLHHGKTSFVDCLMQQTHPDLQSKDDKPVRYTDTLFTEQERGVSIKAMPVSLVCQDVRDKSFLLNVFDTPGHVNFSDEVTASMRLADGVCVFIDAAEGVMLNTERVIKQAVQEKLAVTVCINKIDRLMLELKLPPQDAYYKLRHIVEEVNGLISLYSEDESIQVLSPIQGNVCFASSQYGACFTLKSFAALYNSTYG-NINVNEFARRLWGDIYFNSKTRKFSKKPPHGSAQRSFVEFILEPLYKLFAHVVGDVDTCLPGLCQELGVRLTKEESKMNIRPLLRLICSRFLGNFTGFTDMCVEHIPSPLDNAKMKVDQIYSGTNETERYEDMVACDQDGRLMVHTTKQYPTEDTTCFHVLGRVMSGTLHSGQEIRLLGENYTVFDEEDSRSLRVGRLWIYEARYKIEVNRVPAGNWVLIEGIDQAIVKTSTITDLQG-NEELYIFRPLKFNTQSVIKIAVEPVNPSELPKMLDGLRKVNKSYPLLSTRVEESGEHVILGTGELYLDCVMHDLRKLYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKMTMIAEPLEKGLSEDIENEVVSITWNKKRLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKGLLGSVKESIVQGFQWGTREGPLCEEPIRNVKFKILDAVIANEPIHRGGGQIIPTSRRVAYSAFLMATPRLMEPYLFVEVSAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYIIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDKSITIR 919
BLAST of 116 kda u5 small nuclear ribonucleoprotein component vs. nr
Match: gi|1339039448|ref|XP_023701985.1| (116 kDa U5 small nuclear ribonucleoprotein component [Cryptotermes secundus] >gi|1339039450|ref|XP_023701993.1| 116 kDa U5 small nuclear ribonucleoprotein component [Cryptotermes secundus] >gi|1330935246|gb|PNF43616.1| 116 kDa U5 small nuclear ribonucleoprotein component [Cryptotermes secundus]) HSP 1 Score: 1531.15 bits (3963), Expect = 0.000e+0 Identity = 735/926 (79.37%), Postives = 829/926 (89.52%), Query Frame = 0
Query: 1 MDPDYYDEFGNYIGPDLESEES-----SEDEAEAGALGEAGGSEVVAGEDQLEDEDEAGVSSTAVVLHEDKKYYPTAMEVFGPEVETLVQEEDAQPLTEPIIAPVKRNKFQHVEQELPETSYDAEFLADLMDNPHLVRNVSLVGHLHHGKSSFVDCLMQETHPDLRTKEDKPLRYTDTLFTEQERGVTIKSMPVTLVLQDLRSKSFLINLFDTPGHVNFSDETTASMRLSDGVVVFVDAAEGVMLNTERLVKHAIQEKLAITVCINKIDKLVLELKLPPIDAYFKLRHIVDEINGLLSLYSEEENPQKVSPILGNVCFASSQFGFCLTLRSFAQLYSETYGGSIDVSAFAKRLWGDMFFNPKTRKFAKKSPHASAQRSFVEFILEPLYKIFAQVVGDVDTCLPSLCEELGIRLTKEESKMNIRPLLKLICTRFFGDFNGFVEMLAHHVPSPAENAKNKVQHIYTGNLDTVRAEDMINCDQDGRLMVHTTKQYPNDDLTCFHVFGRIMSGTLHSGQEIRLLGENYTIYDEEDSRNMTVGRLWIYEGRYKIEVNRVPAGNWVLIEGIDQPIVKTSTITDLKGGDEDLYIFRPLKFNTQSVIKIAVEPVNPSELPKMLEGLRKVNKSYPLLNTKVEESGEHVVLGTGELYLDCVMHDLRKLYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVAINWNKKRLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLSSEVDKGLLGSVKDSIVQGFQWGTREGPLCEEPIRNGKFKILDAVIASEPIHRGGGQVIPTARRVAYSAFLMATPRLMEPYMFVEVQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDNT 921
MD D YDEFGNYIGP+LES+E + E EA E G EDQ E+ D + AVVLHEDK+YYP A+EVFGPEVET+VQEED QPL +P++AP+K+ KFQ EQ+LPET Y+ EFLAD+MDNP+L+RNV+L+GHLHHGK++FVDCL+++THP R+ E++ LRYTDTLFTEQERGV IK++PVTLVL D+++KS+LIN+FDTPGHVNFSDE TA+ R+ DGVV+FVDAAEGVMLNTERL+KHA+QEKLAITVCINKID+L+LELKLPP DAY+KLRHIV+EINGLLSLYS++ENP+ VSPILGNVCFASSQ+ C TL+SFA +Y++TY G I+++ FA+RLWGD++FN KTRKF KKSPH SAQRSFVEFILEPLYKIFAQVVGDVDT LP++ +ELGI+LTKEE K+NIRPLL+LIC +F GDF+GFV+M H+PSP +NA+ KVQHIYTG LDTV AE M NCD DG LMV++TK YP +D T F V R+MSGTLH+GQE+++LGENYT+ DEEDSR +TVGRLWIYE RYK+EV+RVPAGNWVLIEGIDQPIVKTSTITDL D DLYIF+PLKFNTQSVIKIAVEPVNPSELPKML+GLRKVNKSYPLL T+VEESGEHVVLGTGELYLDCVMHDLRK+YSEIDIKVADPVV+FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVV I+WNKKRLGEFFQTKYDWDLLAARSIWAFGPD+TGPNILVDDTL SEVDKGLL SVKDSIVQGFQWGTREGPLCEEPIRN KFKILDAVIA EP+HRGGGQ+IPTARRVAYSAFLMATPRLMEPY+FVEVQAPADCVSAVYTVLA+RRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLD +
Sbjct: 1 MDADLYDEFGNYIGPELESDEEEEEGYGDREPEAQEYDEEGA------EDQGEEMD---ATPMAVVLHEDKRYYPAALEVFGPEVETIVQEEDNQPLDKPLVAPIKKKKFQLKEQDLPETVYNMEFLADMMDNPNLIRNVALIGHLHHGKTTFVDCLIRQTHPGFRSTEERNLRYTDTLFTEQERGVGIKAIPVTLVLPDVKNKSYLINVFDTPGHVNFSDEVTAAERICDGVVLFVDAAEGVMLNTERLLKHAVQEKLAITVCINKIDRLMLELKLPPQDAYYKLRHIVEEINGLLSLYSDDENPKIVSPILGNVCFASSQYAVCFTLKSFANIYAQTYDG-ININEFARRLWGDIYFNSKTRKFTKKSPHGSAQRSFVEFILEPLYKIFAQVVGDVDTTLPAVLDELGIKLTKEEMKINIRPLLRLICNKFLGDFSGFVDMCVQHIPSPVDNARPKVQHIYTGPLDTVLAEAMCNCDPDGHLMVYSTKMYPTEDCTFFQVLARVMSGTLHAGQEVKVLGENYTLADEEDSRILTVGRLWIYEARYKVEVSRVPAGNWVLIEGIDQPIVKTSTITDLTISD-DLYIFQPLKFNTQSVIKIAVEPVNPSELPKMLDGLRKVNKSYPLLATRVEESGEHVVLGTGELYLDCVMHDLRKMYSEIDIKVADPVVAFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQISWNKKRLGEFFQTKYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKGLLSSVKDSIVQGFQWGTREGPLCEEPIRNVKFKILDAVIALEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDKS 915
BLAST of 116 kda u5 small nuclear ribonucleoprotein component vs. nr
Match: gi|1228013840|ref|XP_021938883.1| (116 kDa U5 small nuclear ribonucleoprotein component [Zootermopsis nevadensis] >gi|1228013842|ref|XP_021938884.1| 116 kDa U5 small nuclear ribonucleoprotein component [Zootermopsis nevadensis] >gi|646696804|gb|KDR08844.1| 116 kDa U5 small nuclear ribonucleoprotein component [Zootermopsis nevadensis]) HSP 1 Score: 1523.84 bits (3944), Expect = 0.000e+0 Identity = 731/926 (78.94%), Postives = 828/926 (89.42%), Query Frame = 0
Query: 1 MDPDYYDEFGNYIGPDLESEES-----SEDEAEAGALGEAGGSEVVAGEDQLEDEDEAGVSSTAVVLHEDKKYYPTAMEVFGPEVETLVQEEDAQPLTEPIIAPVKRNKFQHVEQELPETSYDAEFLADLMDNPHLVRNVSLVGHLHHGKSSFVDCLMQETHPDLRTKEDKPLRYTDTLFTEQERGVTIKSMPVTLVLQDLRSKSFLINLFDTPGHVNFSDETTASMRLSDGVVVFVDAAEGVMLNTERLVKHAIQEKLAITVCINKIDKLVLELKLPPIDAYFKLRHIVDEINGLLSLYSEEENPQKVSPILGNVCFASSQFGFCLTLRSFAQLYSETYGGSIDVSAFAKRLWGDMFFNPKTRKFAKKSPHASAQRSFVEFILEPLYKIFAQVVGDVDTCLPSLCEELGIRLTKEESKMNIRPLLKLICTRFFGDFNGFVEMLAHHVPSPAENAKNKVQHIYTGNLDTVRAEDMINCDQDGRLMVHTTKQYPNDDLTCFHVFGRIMSGTLHSGQEIRLLGENYTIYDEEDSRNMTVGRLWIYEGRYKIEVNRVPAGNWVLIEGIDQPIVKTSTITDLKGGDEDLYIFRPLKFNTQSVIKIAVEPVNPSELPKMLEGLRKVNKSYPLLNTKVEESGEHVVLGTGELYLDCVMHDLRKLYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVAINWNKKRLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLSSEVDKGLLGSVKDSIVQGFQWGTREGPLCEEPIRNGKFKILDAVIASEPIHRGGGQVIPTARRVAYSAFLMATPRLMEPYMFVEVQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDNT 921
MD D YDEFGNYIGP+LES+E + E EA + G EDQ E+ D + AVVLHEDK+YYP A+EVFGPEVET+VQEED QPL +P++AP+K+ KFQ EQ+LPET Y+ EFLAD+MDNP+L+RNV+L+GHLHHGK++FVDCL+++THP R+ E++ LRYTDTLFTEQERGV IK++PVTLVL D+++KS+LIN+FDTPGHVNFSDE TA+ R+ DGVV+FVDAAEGVMLNTERL+KHA+QEKLAITVCINKID+L+LELKLPP DAY+KLRHIV+EINGLLSLYS+EENP+ VSPILGNVCFASSQ+ C TL+SFA +Y++TY G I+++ F++RLWGD++FN KTRKF KKSPH SAQRSFVEFILEPLYKIFAQVVGDVDT LP++ +ELGI+LTKEE K+NIRPLL+LIC +F GDF+GFV+M H+PSP +NA+ KVQHIYTG LDT AE M +C+ DG LMV++TK YP +D T F V R+MSGTLH+GQE+R+LGENYT+ DEEDSR +TVGRLWIYE RYK+EV+RVP+GNWVLIEGIDQPIVKTSTITDL DE LYIF+PLKFNTQSVIKIAVEPVNPSELPKML+GLRKVNKSYPLL T+VEESGEHVVLGTGELYLDCVMHDLRK+YSEIDIKVADPVV+FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVV I+WNKKRLGEFFQTKYDWDLLAARSIWAFGPD+TGPNILVDDTL SEVDKGLL SVKDSIVQGFQWGTREGPLCEEPIRN KFKILDAVIA EP+HRGGGQ+IPTARRVAYSAFLMATPRLMEPY+FVEVQAPADCVSAVYTVLA+RRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLD +
Sbjct: 1 MDADLYDEFGNYIGPELESDEEEEEGYGDREPEAQEYDDEGA------EDQGEEMD---TTPMAVVLHEDKRYYPAALEVFGPEVETIVQEEDNQPLDKPLVAPIKKKKFQLKEQDLPETVYNMEFLADMMDNPNLIRNVALIGHLHHGKTTFVDCLIRQTHPGFRSTEERNLRYTDTLFTEQERGVGIKAIPVTLVLPDVKNKSYLINVFDTPGHVNFSDEVTAAKRICDGVVLFVDAAEGVMLNTERLLKHAVQEKLAITVCINKIDRLMLELKLPPQDAYYKLRHIVEEINGLLSLYSDEENPKIVSPILGNVCFASSQYAVCFTLKSFANIYAQTYDG-ININEFSRRLWGDIYFNSKTRKFTKKSPHGSAQRSFVEFILEPLYKIFAQVVGDVDTTLPAVLDELGIKLTKEEMKINIRPLLRLICNKFLGDFSGFVDMCVQHIPSPVDNARLKVQHIYTGPLDTDLAEHMCSCNPDGHLMVYSTKMYPTEDCTFFQVLARVMSGTLHAGQEVRVLGENYTLADEEDSRILTVGRLWIYEARYKVEVSRVPSGNWVLIEGIDQPIVKTSTITDLNISDE-LYIFQPLKFNTQSVIKIAVEPVNPSELPKMLDGLRKVNKSYPLLATRVEESGEHVVLGTGELYLDCVMHDLRKMYSEIDIKVADPVVAFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQISWNKKRLGEFFQTKYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKGLLSSVKDSIVQGFQWGTREGPLCEEPIRNVKFKILDAVIAMEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDKS 915
BLAST of 116 kda u5 small nuclear ribonucleoprotein component vs. nr
Match: gi|242021990|ref|XP_002431425.1| (116 kDa U5 small nuclear ribonucleoprotein component, putative [Pediculus humanus corporis] >gi|212516706|gb|EEB18687.1| 116 kDa U5 small nuclear ribonucleoprotein component, putative [Pediculus humanus corporis]) HSP 1 Score: 1508.81 bits (3905), Expect = 0.000e+0 Identity = 722/922 (78.31%), Postives = 826/922 (89.59%), Query Frame = 0
Query: 1 MDPDYYDEFGNYIGPDLESEESSEDEAEAGALGEAGGSEVVAGEDQLEDEDEAGVSSTAVVLHEDKKYYPTAMEVFGPEVETLVQEEDAQPLTEPIIAPVKRNKFQHVEQE-LPETSYDAEFLADLMDNPHLVRNVSLVGHLHHGKSSFVDCLMQETHPDLRTKEDKPLRYTDTLFTEQERGVTIKSMPVTLVLQDLRSKSFLINLFDTPGHVNFSDETTASMRLSDGVVVFVDAAEGVMLNTERLVKHAIQEKLAITVCINKIDKLVLELKLPPIDAYFKLRHIVDEINGLLSLYSEEENPQKVSPILGNVCFASSQFGFCLTLRSFAQLYSETYGGSIDVSAFAKRLWGDMFFNPKTRKFAKKSPHASAQRSFVEFILEPLYKIFAQVVGDVDTCLPSLCEELGIRLTKEESKMNIRPLLKLICTRFFGDFNGFVEMLAHHVPSPAENAKNKVQHIYTGNLDTVRAEDMINCDQDGRLMVHTTKQYPNDDLTCFHVFGRIMSGTLHSGQEIRLLGENYTIYDEEDSRNMTVGRLWIYEGRYKIEVNRVPAGNWVLIEGIDQPIVKTSTITDLKGGDEDLYIFRPLKFNTQSVIKIAVEPVNPSELPKMLEGLRKVNKSYPLLNTKVEESGEHVVLGTGELYLDCVMHDLRKLYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVAINWNKKRLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLSSEVDKGLLGSVKDSIVQGFQWGTREGPLCEEPIRNGKFKILDAVIASEPIHRGGGQVIPTARRVAYSAFLMATPRLMEPYMFVEVQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDNT 921
MD D YDEFGNYIGPDLES++ +++ + + + ++ED D A +S VVLHEDK+YYP A+EV+GPEVET+VQEED QPLT P++APVKR KFQ +Q+ LP+T+YD EFLAD+MDN L+RNV+LVGHLHHGK++FVDCL+++THPD ++ E+K LRYTDTLF EQ RGV+ K+MPVTLVL D++SKS+L+N+FDTPGHVNF DE TA+MR+ DGVV+FVDAAEGV+LNTERL+KHA+QEK+AITVCINKID+L+LELKLPP DAY+KLRHIV+E+NGLLSLYS+ ENP VSP+LGNVCF+SSQ+ C TL+SFA +Y++TYGG I+++ FAKRLWGD++FN KTRKF+KK PH SAQRSFVEFILEPLYKIF QVVGDVDT LP + +ELGIRLTKEE K+NIRPLL+L+C+RF GDFNGFV+M +H+PSP NAKNKVQH+YTG +D+ A+DMINC +G LMVH+TK YP DD T F V GR+MSGTLH+ QE+R+LGENYT+ DEEDSR +TVGRLW+YE RYKIEVNRVPAGNWVLIEGIDQPIVKT+TITD+ D+DLYIFRPLKFNTQSVIKIAVEPVNPSELPKML+GLRKVNKSYPLL+T+VEESGEHVVLGTGELYLDCVMHDLR +YSEIDIKVADPVV+FCETVVETSSLKCFAETPN+KNKITMIAEPLEKGLAEDIENE+V I+WNKKRLGEFFQTKYDWDLLAARSIWAFGPD TGPNILVDDTL SEVDKGLL SVKDSIVQGFQWGTREGPLCEEPIRN KFKILDAVIASEP+HRGGGQ+IPTARRVAYSAFLMATPRLMEPY+FV+VQAPADCVSAVYTVLA+RRGHVTQDAPVPGSPLYTIKAFIPAIDS GFETDLRTHTQGQAFCLSVFHHWQIVPGDPLD +
Sbjct: 1 MDADLYDEFGNYIGPDLESDDEEDEDVTSREQEAQDYDDDGDDDREMEDADIAPMS---VVLHEDKRYYPNALEVYGPEVETIVQEEDNQPLTTPLVAPVKRKKFQVKQQQQLPKTTYDMEFLADMMDNAALIRNVALVGHLHHGKTTFVDCLIRQTHPDFQSTEEKNLRYTDTLFIEQARGVSTKAMPVTLVLPDVKSKSYLMNIFDTPGHVNFCDEATAAMRICDGVVIFVDAAEGVVLNTERLLKHAVQEKVAITVCINKIDRLILELKLPPNDAYYKLRHIVEEVNGLLSLYSDNENPHVVSPLLGNVCFSSSQYAVCFTLKSFANIYNQTYGG-ININEFAKRLWGDIYFNSKTRKFSKKPPHNSAQRSFVEFILEPLYKIFTQVVGDVDTTLPQVLDELGIRLTKEEMKINIRPLLRLVCSRFLGDFNGFVDMCVNHIPSPQSNAKNKVQHVYTGPIDSDLAQDMINCSAEGHLMVHSTKMYPTDDCTFFLVLGRVMSGTLHANQEVRVLGENYTLQDEEDSRILTVGRLWVYEARYKIEVNRVPAGNWVLIEGIDQPIVKTATITDI-NTDDDLYIFRPLKFNTQSVIKIAVEPVNPSELPKMLDGLRKVNKSYPLLSTRVEESGEHVVLGTGELYLDCVMHDLRNMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNRKNKITMIAEPLEKGLAEDIENEIVHISWNKKRLGEFFQTKYDWDLLAARSIWAFGPDITGPNILVDDTLPSEVDKGLLNSVKDSIVQGFQWGTREGPLCEEPIRNVKFKILDAVIASEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVQVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFIPAIDSLGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDKS 917
BLAST of 116 kda u5 small nuclear ribonucleoprotein component vs. nr
Match: gi|291225920|ref|XP_002732943.1| (PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein component-like [Saccoglossus kowalevskii]) HSP 1 Score: 1501.88 bits (3887), Expect = 0.000e+0 Identity = 712/926 (76.89%), Postives = 804/926 (86.83%), Query Frame = 0
Query: 1 MDPDYYDEFGNYIGPDLESEESSEDEAEAGALGEAGGSEVVAGEDQLEDEDEAGVSSTAVVLHEDKKYYPTAMEVFGPEVETLVQEEDAQPLTEPIIAPVKRNKFQHVEQELPETSYDAEFLADLMDNPHLVRNVSLVGHLHHGKSSFVDCLMQETHPDLRTKEDKPLRYTDTLFTEQERGVTIKSMPVTLVLQDLRSKSFLINLFDTPGHVNFSDETTASMRLSDGVVVFVDAAEGVMLNTERLVKHAIQEKLAITVCINKIDKLVLELKLPPIDAYFKLRHIVDEINGLLSLYSEEENPQKVSPILGNVCFASSQFGFCLTLRSFAQLYSETYGGSIDVSAFAKRLWGDMFFNPKTRKFAKKSPHASAQRSFVEFILEPLYKIFAQVVGDVDTCLPSLCEELGIRLTKEESKMNIRPLLKLICTRFFGDFNGFVEMLAHHVPSPAENAKNKVQHIYTGNLDTVRAEDMINCDQDGRLMVHTTKQYPNDDLTCFHVFGRIMSGTLHSGQEIRLLGENYTIYDEEDSRNMTVGRLWIYEGRYKIEVNRVPAGNWVLIEGIDQPIVKTSTITDLKGGDEDLYIFRPLKFNTQSVIKIAVEPVNPSELPKMLEGLRKVNKSYPLLNTKVEESGEHVVLGTGELYLDCVMHDLRKLYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVAINWNKKRLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLSSEVDKGLLGSVKDSIVQGFQWGTREGPLCEEPIRNGKFKILDAVIASEPIHRGGGQVIPTARRVAYSAFLMATPRLMEPYMFVEVQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDNTCPRRT 926
MD D YDEFGNYIGP+L S+ + E A ED +++ E V + A++LHEDKKYYPT+ E++GPEVET++QEED QPLTEPIIAPVK KF VEQELP T+YD+E+LADLMDN L+RNV+L GHLHHGK++FVDCL+++THP+LRTKEDK LRY DTLFTE ERGV+IK+ PVTLVLQD R KS+L+N+FDTPGHVNFSDE TA+ RLSDG ++FVDAAEGVMLNTERL+KHA+QE +A+ +CINKID+L+LELKLPP DAY+KLRHIVDE+N LLS YSE +N +VSP+LGNVCFASSQ+ FC TL SFA+LY TYGG ++ F+KRLWGD++F+ KTRKF KK PH+SAQRSFVEFILEPLYK+FAQVVGDVD+ LP + +ELGI+LTKEE KMNIRPL++L+C +FFGDF GFV+M HHV SP AKNK+ IYTG LDT A+ MI+CDQ+G LMVH TK Y +D FH FGRIMSGTLH+ ++R+LGENYT+ DEEDSR +GRLWI E RYKIEVNRVPAGNWVLIEGIDQPIVKT+TIT+ +G +E+ YIF+PLKFNT SVIKIAVEPVNPSELPKML+GLRKVNKSYPLL TKVEESGEHVVLGTGELYLDCVMHDLRK+YSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNK+TMIAEPLEKGLAEDIENEVV I WN+KRLGEFFQTKYDWDLLAARSIWAFGPD TGPNILVDDTL SEVDKGLL SVKDSI+QGFQWGTREGPLC+EPIRN KFKILDAVIA EP+HRGGGQ+IPTARRVAYSAFLMATPRLMEPY FVEVQAPADCVSAVYTVLARRRGHVTQDAP+PGSPLYTIKAF+P IDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLD + RT
Sbjct: 1 MDADLYDEFGNYIGPELASDSDDDAADHD-----DQRYEFEAAEDDIDEPMEHDVPTQAIILHEDKKYYPTSEEIYGPEVETIIQEEDTQPLTEPIIAPVKVKKFSLVEQELPVTTYDSEYLADLMDNAELIRNVTLAGHLHHGKTAFVDCLLEQTHPELRTKEDKRLRYCDTLFTEVERGVSIKATPVTLVLQDTREKSYLMNVFDTPGHVNFSDEATAAFRLSDGAIIFVDAAEGVMLNTERLIKHAVQEGIAVCICINKIDRLMLELKLPPTDAYYKLRHIVDEVNALLSTYSETDNEYQVSPLLGNVCFASSQYAFCFTLASFAKLYENTYGG-VNYLEFSKRLWGDIYFHSKTRKFTKKPPHSSAQRSFVEFILEPLYKLFAQVVGDVDSTLPGVLDELGIKLTKEELKMNIRPLMRLVCKKFFGDFTGFVDMCVHHVKSPVGYAKNKIDQIYTGPLDTDLADSMIDCDQEGPLMVHITKMYSTEDGVSFHAFGRIMSGTLHANSDVRVLGENYTLEDEEDSRICQIGRLWISEARYKIEVNRVPAGNWVLIEGIDQPIVKTATITEARG-NEEAYIFKPLKFNTSSVIKIAVEPVNPSELPKMLDGLRKVNKSYPLLTTKVEESGEHVVLGTGELYLDCVMHDLRKMYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKLTMIAEPLEKGLAEDIENEVVQITWNRKRLGEFFQTKYDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKGLLNSVKDSIIQGFQWGTREGPLCDEPIRNVKFKILDAVIAGEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFLPTIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDKSIVIRT 919
BLAST of 116 kda u5 small nuclear ribonucleoprotein component vs. nr
Match: gi|675373509|gb|KFM66411.1| (U5 small nuclear ribonucleoprotein component, partial [Stegodyphus mimosarum]) HSP 1 Score: 1496.87 bits (3874), Expect = 0.000e+0 Identity = 713/919 (77.58%), Postives = 794/919 (86.40%), Query Frame = 0
Query: 1 MDPDYYDEFGNYIGPDLESEESSEDEAEAGALGEAGGSEVVAGEDQLEDEDEAGVSSTAVVLHEDKKYYPTAMEVFGPEVETLVQEEDAQPLTEPIIAPVKRNKFQHVEQELPETSYDAEFLADLMDNPHLVRNVSLVGHLHHGKSSFVDCLMQETHPDLRTKEDKPLRYTDTLFTEQERGVTIKSMPVTLVLQDLRSKSFLINLFDTPGHVNFSDETTASMRLSDGVVVFVDAAEGVMLNTERLVKHAIQEKLAITVCINKIDKLVLELKLPPIDAYFKLRHIVDEINGLLSLYSEEENPQKVSPILGNVCFASSQFGFCLTLRSFAQLYSETYGGSIDVSAFAKRLWGDMFFNPKTRKFAKKSPHASAQRSFVEFILEPLYKIFAQVVGDVDTCLPSLCEELGIRLTKEESKMNIRPLLKLICTRFFGDFNGFVEMLAHHVPSPAENAKNKVQHIYTGNLDTVRAEDMINCDQDGRLMVHTTKQYPNDDLTCFHVFGRIMSGTLHSGQEIRLLGENYTIYDEEDSRNMTVGRLWIYEGRYKIEVNRVPAGNWVLIEGIDQPIVKTSTITDLKGGDEDLYIFRPLKFNTQSVIKIAVEPVNPSELPKMLEGLRKVNKSYPLLNTKVEESGEHVVLGTGELYLDCVMHDLRKLYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVAINWNKKRLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLSSEVDKGLLGSVKDSIVQGFQWGTREGPLCEEPIRNGKFKILDAVIASEPIHRGGGQVIPTARRVAYSAFLMATPRLMEPYMFVEVQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLD 919
MD D YDEFGNYIGP L+S+ E++ E D+ DEDEA +VLHEDKKYYP+A EV+GP+VET+VQEED Q LTEPIIAPVKR KF + EQ+LP T Y+ EFLADLMDN L+RNV+L+GHLHHGK+SFVDCL+++THPD++ +E LRYTDTL+TEQERGV+IK+ PVT VL DL+ KSFL+N+FDTPGHVNFSDE TA++RL DGV++FVDAAEGVMLNTERL+KHA+QEKLAI +CINKID+L+LELKLPP DAY+KLRHI++EINGLLS+YS+E+ VSP+LGNVCFASSQ+ C TLRSFA +Y++TYGG I V FAKRLWGD++FN KTRKF KK PH+S QRSFVEFILEPLYK+FAQVVGDVDT LP L +EL I+LTK E K+N+RPLL+LIC++F GDFNGFV+M HHVPSP+ NAK K+ HIYTG + A+ M CD +G LMVHTTKQY D T FHVFGR+MSGTLH+ Q++R+LGE YT DEEDSR +TVGRLWI E RYKIEVNRVPAGNWVLIEGIDQPIVKT+TI D E LYIFRPLKFNT SVIKIAVEPVNPSELPKML GLRKVNKSYPLL+TK+EESGEH++LGTGELYLDCVMHDLRK+YSEIDIKVADPVV FCETVVETSSLKCFAETPNKKNK+TMIAEPLEKGLAEDIENEVV INWN+KRLGEFFQ KYDWDLLAARSIWAFGPD TGPNILVDDTL SEVDK LL VKDSIVQGFQW TREGPLCEEPIRN KFKILDAVIA EPIHRGGGQ+IPTARRVAYSAFLMATPRLMEPY FVEVQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLD
Sbjct: 5 MDADLYDEFGNYIGPQLDSDSEEEEDNYDRQEPEEIEYIEEDAMDEGRDEDEA--PQMQIVLHEDKKYYPSAEEVYGPDVETIVQEEDTQALTEPIIAPVKRKKFAYAEQDLPNTKYNLEFLADLMDNTDLIRNVALIGHLHHGKTSFVDCLIEQTHPDMKAREGSNLRYTDTLYTEQERGVSIKATPVTFVLPDLKGKSFLMNVFDTPGHVNFSDEVTAAIRLCDGVILFVDAAEGVMLNTERLLKHAVQEKLAICICINKIDRLMLELKLPPQDAYYKLRHIIEEINGLLSVYSDEKENISVSPLLGNVCFASSQYSLCFTLRSFAHMYAQTYGG-ISVQDFAKRLWGDIYFNSKTRKFTKKPPHSSVQRSFVEFILEPLYKLFAQVVGDVDTTLPQLLDELAIKLTKTEMKLNVRPLLRLICSKFVGDFNGFVDMCVHHVPSPSANAKLKIGHIYTGPPGSDLADAMAECDPEGPLMVHTTKQYSTQDATSFHVFGRVMSGTLHANQDVRILGETYTSTDEEDSRILTVGRLWISEARYKIEVNRVPAGNWVLIEGIDQPIVKTATIVDTNETSE-LYIFRPLKFNTNSVIKIAVEPVNPSELPKMLGGLRKVNKSYPLLSTKIEESGEHIILGTGELYLDCVMHDLRKMYSEIDIKVADPVVCFCETVVETSSLKCFAETPNKKNKLTMIAEPLEKGLAEDIENEVVQINWNRKRLGEFFQNKYDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKSLLSMVKDSIVQGFQWATREGPLCEEPIRNVKFKILDAVIAGEPIHRGGGQIIPTARRVAYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLD 919
BLAST of 116 kda u5 small nuclear ribonucleoprotein component vs. nr
Match: gi|1080035039|ref|XP_018570689.1| (116 kDa U5 small nuclear ribonucleoprotein component [Anoplophora glabripennis]) HSP 1 Score: 1493.4 bits (3865), Expect = 0.000e+0 Identity = 710/921 (77.09%), Postives = 813/921 (88.27%), Query Frame = 0
Query: 1 MDPDYYDEFGNYIGPDLESEESSEDEAEAGALGEAGGSEVVAGEDQLEDEDEAGVSSTAVVLHEDKKYYPTAMEVFGPEVETLVQEEDAQPLTEPIIAPVKRNKFQHVEQELPETSYDAEFLADLMDNPHLVRNVSLVGHLHHGKSSFVDCLMQETHPDLRTKEDKPLRYTDTLFTEQERGVTIKSMPVTLVLQDLRSKSFLINLFDTPGHVNFSDETTASMRLSDGVVVFVDAAEGVMLNTERLVKHAIQEKLAITVCINKIDKLVLELKLPPIDAYFKLRHIVDEINGLLSLYSEEENPQKVSPILGNVCFASSQFGFCLTLRSFAQLYSETYGGSIDVSAFAKRLWGDMFFNPKTRKFAKKSPHASAQRSFVEFILEPLYKIFAQVVGDVDTCLPSLCEELGIRLTKEESKMNIRPLLKLICTRFFGDFNGFVEMLAHHVPSPAENAKNKVQHIYTGNLDTVRAEDMINCDQDGRLMVHTTKQYPNDDLTCFHVFGRIMSGTLHSGQEIRLLGENYTIYDEEDSRNMTVGRLWIYEGRYKIEVNRVPAGNWVLIEGIDQPIVKTSTITDLKGGDEDLYIFRPLKFNTQSVIKIAVEPVNPSELPKMLEGLRKVNKSYPLLNTKVEESGEHVVLGTGELYLDCVMHDLRKLYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVAINWNKKRLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLSSEVDKGLLGSVKDSIVQGFQWGTREGPLCEEPIRNGKFKILDAVIASEPIHRGGGQVIPTARRVAYSAFLMATPRLMEPYMFVEVQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDNT 921
MD D YDEFGNYIGP+L+S++ E+E E E + ++Q+EDE + A+VLHEDK+YYP+A++V+GP+VET+VQEEDAQPL P+I PVK+ KFQ EQELPET Y EFLAD+MDN L+RNV+LVGHLHHGK+SFVDCL+++THP + E+K LRYTDTLFTEQERG +IKS+PVTL+LQD+++KS+L+N+FDTPGHVNFSDE TA+MRL DGVV+FVDAAEGVMLNTERL+KHA+QE++ IT+CINKID+L+LELKLPP DAY+KLRHIV+EINGLL+LYS++ NP VSP+LGNVCFASSQ+G C TL+SFA +Y+ Y G ++V F+KRLWGD++FN KTRKF +K+PH SAQRSFVEFILEPLYKIFAQVVGDVD+ LP + +ELGI+LTK E ++NIRPLL+L+C +F GDFNGFV M H+ SP +NAK KV HIYTG + +DMINCDQ+G LMVH++K YP +D T F V GR+MSGTLH+G ++R+LGENYT+ DEEDSR +T+GRLWIYE RYK+E+NRVPAGNWVLIEGIDQ IVKT+TITDL D DLYIFRPLKFNTQS+IKIAVEPVNPSELPKML+GLRKVNKSYPLL TKVEESGEHVVLGTGELYLDCVMHDLRK+YSEIDIKVADPVV+FCETVVETSSLKCFAETPNKKNK+TMIAEPLEKGLAEDIENE V INWNKK+LGEFFQTKYDWDLLAARSIWAFGPD TGPNILVDDTL SEVDK LL SVKDSIVQGFQWGTREGPLCEEPIRN KFKILDAVIA+EP+HRGGGQ+IPTARRV YSAFLMATPRLMEPY+FVEVQAPADCVSAVYTVLA+RRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLD T
Sbjct: 1 MDTDLYDEFGNYIGPELDSDDDEEEEQEHHDEDEHQDYD----DEQMEDEPQP----MAIVLHEDKQYYPSALQVYGPDVETIVQEEDAQPLDVPLIEPVKKKKFQLKEQELPETVYSMEFLADMMDNTSLIRNVALVGHLHHGKTSFVDCLIRQTHPGYQDNEEKNLRYTDTLFTEQERGCSIKSIPVTLLLQDVKNKSYLMNIFDTPGHVNFSDEVTAAMRLCDGVVLFVDAAEGVMLNTERLLKHAVQEQMQITICINKIDRLILELKLPPQDAYYKLRHIVEEINGLLTLYSDDANPYIVSPVLGNVCFASSQYGVCFTLKSFANIYN-LYYGEVNVEEFSKRLWGDIYFNNKTRKFTRKAPHNSAQRSFVEFILEPLYKIFAQVVGDVDSTLPDVLDELGIKLTKNEMRLNIRPLLRLVCGKFLGDFNGFVNMCVEHIRSPLDNAKTKVDHIYTGPNTSKIYDDMINCDQEGLLMVHSSKMYPTEDCTFFQVLGRVMSGTLHAGTDVRILGENYTLQDEEDSRVLTIGRLWIYESRYKVELNRVPAGNWVLIEGIDQSIVKTATITDLTIHD-DLYIFRPLKFNTQSIIKIAVEPVNPSELPKMLDGLRKVNKSYPLLTTKVEESGEHVVLGTGELYLDCVMHDLRKMYSEIDIKVADPVVAFCETVVETSSLKCFAETPNKKNKLTMIAEPLEKGLAEDIENENVQINWNKKKLGEFFQTKYDWDLLAARSIWAFGPDNTGPNILVDDTLPSEVDKALLSSVKDSIVQGFQWGTREGPLCEEPIRNTKFKILDAVIANEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYLFVEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDKT 911
BLAST of 116 kda u5 small nuclear ribonucleoprotein component vs. nr
Match: gi|1009576814|ref|XP_015920056.1| (116 kDa U5 small nuclear ribonucleoprotein component-like [Parasteatoda tepidariorum]) HSP 1 Score: 1492.63 bits (3863), Expect = 0.000e+0 Identity = 711/935 (76.04%), Postives = 808/935 (86.42%), Query Frame = 0
Query: 1 MDPDYYDEFGNYIGPDLESEESSEDEAEAGALGEAGGSEVVAGEDQLEDEDEAGVSSTAVVLHEDKKYYPTAMEVFGPEVETLVQEEDAQPLTEPIIAPVKRNKFQHVEQELPETSYDAEFLADLMDNPHLVRNVSLVGHLHHGKSSFVDCLMQETHPDLRTKEDKPLRYTDTLFTEQERGVTIKSMPVTLVLQDLRSKSFLINLFDTPGHVNFSDETTASMRLSDGVVVFVDAAEGVMLNTERLVKHAIQEKLAITVCINKIDKLVLELKLPPIDAYFKLRHIVDEINGLLSLYSEEENPQKVSPILGNVCFASSQFGFCLTLRSFAQLYSETYGGSIDVSAFAKRLWGDMFFNPKTRKFAKKSPHASAQRSFVEFILEPLYKIFAQVVGDVDTCLPSLCEELGIRLTKEESKMNIRPLLKLICTRFFGDFNGFVEMLAHHVPSPAENAKNKVQHIYTGNLDTVRAEDMINCDQDGRLMVHTTKQYPNDDLTCFHVFGRIMSGTLHSGQEIRLLGENYTIYDEEDSRNMTVGRLWIYEGRYKIEVNRVPAGNWVLIEGIDQPIVKTSTITDLKGGDEDLYIFRPLKFNTQSVIKIAVEPVNPSELPKMLEGLRKVNKSYPLLNTKVEESGEHVVLGTGELYLDCVMHDLRKLYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVAINWNKKRLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLSSEVDKGLLGSVKDSIVQGFQWGTREGPLCEEPIRNGKFKILDAVIASEPIHRGGGQVIPTARRVAYSAFLMATPRLMEPYMFVEVQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDNTCPRRTQVREVVPHV 935
MD D YDEFGNYIGP L+++ E+E+ +A ++ D+DE + +VLHEDKKYYP+A EV+GP+VET+VQEED Q LTEPIIAPVKR KF +VEQ+LP T Y+ EFLADLMDN L+RNV++VGHLHHGK+SFVDCL+++THPDLR +E LRYTDTL+TEQERGV+IK+ PVT VL DL+ KS+L+N+FDTPGHVNFSDE TA+MRLSDGV++FVDAAEGVMLNTERL+KHA+QEKLAI +CINKID+L+LELKLPP DAY+KLRHIV+EINGLLS Y+++ P +VSP+LGNVCFASSQ+ C TLRSFA +Y++TYGG I V F+KRLWGD++FN KTRKF +K+PH++ QRSFVEFILEPLYK+FAQVVGDVD+ LP L +EL I+LTK E K+N+RPLL+LI ++F GDFNGFV+M HHVP+P+ +AK K++HIYTG T A+ M +CD +G LMVHTTKQY D T FHVFGR+ SGTL + Q++R+LGE YT DEEDSR +TVGRLWI E RYKIEVNRVPAGNWVLIEGIDQPIVKT+TI D+ E L+IFRPLKFNT SVIKIAVEPVNPSELPKML GLRKVNKSYPLL+TK+EESGEH++LGTGELYLDCVMHDLRK+YSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNK+TMIAEPLEKGLAEDIENEVV INWN+KRLGEFFQTKYDWDLLAARSIWAFGPD TGPNILVDDTL SEVDKGLL VKDSIVQGFQW TREGPLCEEPIRN KFKILDAVIA EPIHRGGGQ+IPTARRVAYSAFLMATPRLMEPY FVEVQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLD + R + PH+
Sbjct: 1 MDADLYDEFGNYIGPQLDTDSEEEEESYERQEPDAIDYNEDEAMEEGHDDDE--IPQMQIVLHEDKKYYPSAAEVYGPDVETIVQEEDTQALTEPIIAPVKRKKFSYVEQDLPITKYNLEFLADLMDNTDLIRNVAVVGHLHHGKTSFVDCLIEQTHPDLRAREGSNLRYTDTLYTEQERGVSIKATPVTFVLPDLKGKSYLMNVFDTPGHVNFSDEVTAAMRLSDGVIIFVDAAEGVMLNTERLLKHAVQEKLAICICINKIDRLMLELKLPPQDAYYKLRHIVEEINGLLSTYADDNEPIQVSPLLGNVCFASSQYSLCFTLRSFAHMYAQTYGG-ISVPDFSKRLWGDIYFNSKTRKFTRKAPHSTVQRSFVEFILEPLYKLFAQVVGDVDSSLPQLLDELSIKLTKSEMKLNVRPLLRLINSKFVGDFNGFVDMCVHHVPAPSASAKRKIEHIYTGPSGTELADVMADCDPEGPLMVHTTKQYSTQDATSFHVFGRVFSGTLQANQDVRILGETYTSTDEEDSRILTVGRLWISEARYKIEVNRVPAGNWVLIEGIDQPIVKTATIVDVSEAAE-LFIFRPLKFNTNSVIKIAVEPVNPSELPKMLGGLRKVNKSYPLLSTKIEESGEHIILGTGELYLDCVMHDLRKMYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKLTMIAEPLEKGLAEDIENEVVQINWNRKRLGEFFQTKYDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKGLLSMVKDSIVQGFQWATREGPLCEEPIRNVKFKILDAVIAGEPIHRGGGQIIPTARRVAYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDKSIVIRPLEPQPAPHL 931
BLAST of 116 kda u5 small nuclear ribonucleoprotein component vs. nr
Match: gi|1233205038|ref|XP_022201628.1| (116 kDa U5 small nuclear ribonucleoprotein component [Nilaparvata lugens]) HSP 1 Score: 1492.25 bits (3862), Expect = 0.000e+0 Identity = 717/933 (76.85%), Postives = 816/933 (87.46%), Query Frame = 0
Query: 1 MDPDYYDEFGNYIGPDLESEESS-----------EDEAEAGALGEAGGSEVVAGEDQLEDEDEAGVSSTAVVLHEDKKYYPTAMEVFGPEVETLVQEEDAQPLTEPIIAPVKRNKFQHVEQELPETSYDAEFLADLMDNPHLVRNVSLVGHLHHGKSSFVDCLMQETHPDL-RTKEDKPLRYTDTLFTEQERGVTIKSMPVTLVLQDLRSKSFLINLFDTPGHVNFSDETTASMRLSDGVVVFVDAAEGVMLNTERLVKHAIQEKLAITVCINKIDKLVLELKLPPIDAYFKLRHIVDEINGLLSLYSEEENPQKVSPILGNVCFASSQFGFCLTLRSFAQLYSETYGGSIDVSAFAKRLWGDMFFNPKTRKFAKKSPHASAQRSFVEFILEPLYKIFAQVVGDVDTCLPSLCEELGIRLTKEESKMNIRPLLKLICTRFFGDFNGFVEMLAHHVPSPAENAKNKVQHIYTGNLDTVRAEDMINCDQDGRLMVHTTKQYPNDDLTCFHVFGRIMSGTLHSGQEIRLLGENYTIYDEEDSRNMTVGRLWIYEGRYKIEVNRVPAGNWVLIEGIDQPIVKTSTITDLKGGDEDLYIFRPLKFNTQSVIKIAVEPVNPSELPKMLEGLRKVNKSYPLLNTKVEESGEHVVLGTGELYLDCVMHDLRKLYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVAINWNKKRLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLSSEVDKGLLGSVKDSIVQGFQWGTREGPLCEEPIRNGKFKILDAVIASEPIHRGGGQVIPTARRVAYSAFLMATPRLMEPYMFVEVQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDNT 921
MD D YDEFGNYIGP+LES+E +D + G +A V G D + G+++TAVVLHEDK+YYP A+EVFGP+VET+VQEEDAQPLT P++APVK+ +FQ EQ LP+T+Y+ E+LAD+MD P LVRNV+LVGHLHHGK++ DCL++ THP L E++ LRYTD+LFTEQERGV+IK+ P+TL+L D++ KS LIN+FDTPGHVNFSDE TA+MR+ DGVV+FVDAAEGVMLNTERL+KHA+QEKLAITVC+NKID+L+LELKLPP DAY+K+RHI+DEINGLLSLYS+EE + VSPILGNVCFAS Q+ C TLRSFA LY+ TY + ++ FA+RLWGD++FN KTR+F+KK H SAQRSFVEF+LEPLYK+FAQVVGDVD+ LP++ +ELG+RL+K+E+K+NIRPLL+L+C RF DF+GFV+M HH+PSP NA+ KV+HIYTG DT AEDMINCD DGRLMVH+TK YP DD T F V GR+MSGTLH+ QE+R+LGENYT+ DEEDSR +TVGRLWIYE RYKIEVNRVPAGNWVLIEGIDQPIVKTSTITDL +ED+YIFRPLKFNTQSVIKIAVEPVNPSELPKML+GLRKVNKSYPLL T+VEESGEHVVLGTGELYLDCVMHDLRK+YSEIDIKVADPVVSFCETVVETSSLKCFAETPNK+NKITMIAEPLEKGLAEDIEN+VV I+WNKKRLGEFFQTKYDWDLLAARSIWAFGPD GPNILVDDTL SEVDK LLGSVKDSIVQGFQWGTREGPLCEEPIRN KFKILDAVIA EP+HRGGGQ+IPTARRVAYSAFLMATPRLMEPY+FVE QAPADCVSAVYTVLA+RRGHVTQD PVPGSPLYTIKAFIPA+DSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLD +
Sbjct: 1 MDADLYDEFGNYIGPELESDEEEEEDVPDRDHDMQDYDDEGG-DDAMVMGGVGGMDDGGEGGGGGMATTAVVLHEDKRYYPAALEVFGPDVETIVQEEDAQPLTVPLVAPVKKTRFQINEQALPKTTYNVEYLADMMDTPDLVRNVALVGHLHHGKTTLADCLVRHTHPGLIDASEERNLRYTDSLFTEQERGVSIKATPLTLLLNDVKGKSHLINIFDTPGHVNFSDEVTAAMRMCDGVVIFVDAAEGVMLNTERLIKHAVQEKLAITVCVNKIDRLMLELKLPPQDAYYKIRHIIDEINGLLSLYSDEETTKFVSPILGNVCFASPQYAVCFTLRSFANLYANTYP-DVQINEFARRLWGDIYFNSKTRRFSKKPAHGSAQRSFVEFVLEPLYKLFAQVVGDVDSTLPAVLDELGVRLSKDEAKINIRPLLRLVCGRFLNDFSGFVDMCVHHIPSPVNNARTKVEHIYTGPTDTQLAEDMINCDPDGRLMVHSTKMYPTDDCTFFQVCGRVMSGTLHASQEVRVLGENYTLADEEDSRILTVGRLWIYEARYKIEVNRVPAGNWVLIEGIDQPIVKTSTITDLIT-NEDIYIFRPLKFNTQSVIKIAVEPVNPSELPKMLDGLRKVNKSYPLLGTRVEESGEHVVLGTGELYLDCVMHDLRKMYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKRNKITMIAEPLEKGLAEDIENQVVHISWNKKRLGEFFQTKYDWDLLAARSIWAFGPDTAGPNILVDDTLPSEVDKSLLGSVKDSIVQGFQWGTREGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQMIPTARRVAYSAFLMATPRLMEPYLFVETQAPADCVSAVYTVLAKRRGHVTQDTPVPGSPLYTIKAFIPAVDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDKS 930
BLAST of 116 kda u5 small nuclear ribonucleoprotein component vs. nr
Match: gi|1022772891|gb|KZS17043.1| (Uncharacterized protein APZ42_017118 [Daphnia magna]) HSP 1 Score: 1492.25 bits (3862), Expect = 0.000e+0 Identity = 708/930 (76.13%), Postives = 813/930 (87.42%), Query Frame = 0
Query: 1 MDPDYYDEFGNYIGPDLESEESSEDEAEAGALGEAGGSEVVAGEDQLEDEDEAGVSSTAVVLHEDKKYYPTAMEVFGPEVETLVQEEDAQPLTEPIIAPVKRNKFQHVEQELPETSYDAEFLADLMDNPHLVRNVSLVGHLHHGKSSFVDCLMQETHPDLRTK-----EDKPLRYTDTLFTEQERGVTIKSMPVTLVLQDLRSKSFLINLFDTPGHVNFSDETTASMRLSDGVVVFVDAAEGVMLNTERLVKHAIQEKLAITVCINKIDKLVLELKLPPIDAYFKLRHIVDEINGLLSLYSEEENPQKVSPILGNVCFASSQFGFCLTLRSFAQLYSETYGGSIDVSAFAKRLWGDMFFNPKTRKFAKKSPHASAQRSFVEFILEPLYKIFAQVVGDVDTCLPSLCEELGIRLTKEESKMNIRPLLKLICTRFFGDFNGFVEMLAHHVPSPAENAKNKVQHIYTGNLDTVRAEDMINCDQDGRLMVHTTKQYPNDDLTCFHVFGRIMSGTLHSGQEIRLLGENYTIYDEEDSRNMTVGRLWIYEGRYKIEVNRVPAGNWVLIEGIDQPIVKTSTITDLKGGDEDLYIFRPLKFNTQSVIKIAVEPVNPSELPKMLEGLRKVNKSYPLLNTKVEESGEHVVLGTGELYLDCVMHDLRKLYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVAINWNKKRLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLSSEVDKGLLGSVKDSIVQGFQWGTREGPLCEEPIRNGKFKILDAVIASEPIHRGGGQVIPTARRVAYSAFLMATPRLMEPYMFVEVQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDNTCPRR 925
MD D YDEFGNYIGP+LES+E + EA EA E+ ++ G A+VLHEDKKYYP+A+EV+GP VETLVQEEDAQPLTEPIIAPVKR KFQ EQELPET+Y+ EFLADLMD+ L+R+V+LVGHLHHGK+SF+DCL+ +THPDL+T E+KP+RYTDTLFTEQERGV+IK+ P+T+V+ DL KSFL+N+FDTPGHVNFSDE TA++RL DG+V+FVDA EGVMLNTER++KHA+QEK+AITVCINKID+L+LELKLPP DAY+KLR+I++EINGLL LYS+EENP+ VSP+LGNVCFAS+QF C TL+SFA+LYS+TYG I+ A+RLWGD++FN KTRKF KK PH+SAQRSF+EFILEPLYKIFAQVVGD+DT LP L +ELGIRLT EE ++N RPLL+L+C+R+ G F+GFV+M H+PSP A+ KV+HIYTG L+++ EDM+NCD +G+L+VHTTKQYP +D T F+V GR++SGTLH+ Q +RLLGENY++ DEEDSR +T+GRLWIYE RYKIEVNRV AG+WVLIEGID +VKTSTI DEDLYI RPLKFNTQS+IKIAVEPVNPSELPKML+GLRKVNKSYPLL+T+VEESGEHV+LGTGELYLDCVMHDLRK+YSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIEN VV INWNKK+L EFFQ KYDWDLLAARSIWAFGPD+TGPNILVDDTL SEV+K LL +VKDSIVQGFQWGTREGPLCEEPIRN KFKILDAVIA EP+HRGGGQ+IPT+RRVAYSAFLMATPRLMEPY+FVEVQAPADCVSAVY+VLARRRGHVTQDAPVPGSPLY IKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLD + R
Sbjct: 1 MDADLYDEFGNYIGPELESDEEENEGDEADRDDEAEDYGDNDSEEAMDQTVADGEPQMAIVLHEDKKYYPSALEVYGPGVETLVQEEDAQPLTEPIIAPVKRRKFQVAEQELPETTYNMEFLADLMDSAELIRSVALVGHLHHGKTSFMDCLLMQTHPDLQTGRPGSGEEKPVRYTDTLFTEQERGVSIKATPITVVMPDLNEKSFLLNMFDTPGHVNFSDEVTAALRLCDGIVLFVDAVEGVMLNTERILKHAVQEKMAITVCINKIDRLILELKLPPQDAYYKLRYIIEEINGLLGLYSDEENPKIVSPLLGNVCFASAQFSVCFTLKSFAKLYSDTYGSDINDHELARRLWGDIYFNSKTRKFTKKPPHSSAQRSFIEFILEPLYKIFAQVVGDLDTSLPQLLDELGIRLTVEEQRLNTRPLLRLVCSRYLGTFSGFVDMCVKHIPSPVVAARTKVEHIYTGPLESILGEDMVNCDPNGQLVVHTTKQYPTEDCTGFYVLGRVLSGTLHAHQNVRLLGENYSLSDEEDSRLLTIGRLWIYEARYKIEVNRVTAGSWVLIEGIDASVVKTSTIVQ-ASIDEDLYICRPLKFNTQSIIKIAVEPVNPSELPKMLDGLRKVNKSYPLLSTRVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVSFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENGVVQINWNKKKLSEFFQNKYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVNKSLLNTVKDSIVQGFQWGTREGPLCEEPIRNAKFKILDAVIADEPVHRGGGQIIPTSRRVAYSAFLMATPRLMEPYLFVEVQAPADCVSAVYSVLARRRGHVTQDAPVPGSPLYIIKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDKSIVLR 929 The following BLAST results are available for this feature:
BLAST of 116 kda u5 small nuclear ribonucleoprotein component vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 6
BLAST of 116 kda u5 small nuclear ribonucleoprotein component vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of 116 kda u5 small nuclear ribonucleoprotein component vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold178_size283195:9274..21203+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold178_size283195-snap-gene-0.10 ID=maker-scaffold178_size283195-snap-gene-0.10|Name=116 kda u5 small nuclear ribonucleoprotein component|organism=Tigriopus kingsejongensis|type=gene|length=11930bp|location=Sequence derived from alignment at scaffold178_size283195:9274..21203+ (Tigriopus kingsejongensis)back to top Synonyms
The feature '116 kda u5 small nuclear ribonucleoprotein component' has the following synonyms
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