broad-complex core protein partial, maker-scaffold202_size261857-snap-gene-1.21 (gene) Tigriopus kingsejongensis

Overview
Namebroad-complex core protein partial
Unique Namemaker-scaffold202_size261857-snap-gene-1.21
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of broad-complex core protein partial vs. L. salmonis genes
Match: EMLSAG00000009243 (supercontig:LSalAtl2s:LSalAtl2s588:73133:77912:1 gene:EMLSAG00000009243 transcript:EMLSAT00000009243 description:"maker-LSalAtl2s588-augustus-gene-0.13")

HSP 1 Score: 107.842 bits (268), Expect = 2.389e-26
Identity = 47/111 (42.34%), Postives = 72/111 (64.86%), Query Frame = 0 
Query:   26 EHFCLKWNNYQTNIVSALGNLKLDEDFVDVTLSCEGRQIKAHKVILSACSDYFKEVFKDNPCSHPVVILRDAAFADVEGLVRYVYRGEVDVQPERLQSFLKTAEVLRIKGL 136
            E  CL  N++++N+ S    L+ DEDF DVTL+C  + IKAHK+ILSA S +F+ + K  P +HP++ +R   F  +E ++ ++Y GEV ++P  L  FL  AE L++ GL
Sbjct:    5 EMICLHSNDFESNLKSGFSQLRNDEDFFDVTLTCGSKHIKAHKMILSAYSSFFRSLIKSVPHTHPLLYMRGINFNHLESILSFMYNGEVYIKPHELDQFLSIAEELKVNGL 115
[Close]
BLAST of broad-complex core protein partial vs. L. salmonis genes
Match: EMLSAG00000008772 (supercontig:LSalAtl2s:LSalAtl2s543:279105:281214:-1 gene:EMLSAG00000008772 transcript:EMLSAT00000008772 description:"augustus-LSalAtl2s543-processed-gene-1.15")

HSP 1 Score: 102.449 bits (254), Expect = 2.925e-25
Identity = 48/114 (42.11%), Postives = 70/114 (61.40%), Query Frame = 0 
Query:   26 EHFCLKWNNYQTNIVSALGNLKLDEDFVDVTLSCEGRQIKAHKVILSACSDYFKEVFKDNPC-SHPVVILRDAAFADVEGLVRYVYRGEVDVQPERLQSFLKTAEVLRIKGLAD 138
            E  CL+WN Y++N      +L+ +E+  DVTL    + IKAHKVILSACS  F+ +    P  +HP++ LR   F  +E L+ ++Y GEV V  E L+ F+  AE  +IKGL++
Sbjct:    5 EXLCLRWNEYESNFKQGFSDLRENEELFDVTLISGSKIIKAHKVILSACSPIFRSIIASAPIQTHPLIYLRGINFDHLELLLSFMYHGEVKVIQEELEDFISIAEEFQIKGLSN 118

HSP 2 Score: 67.781 bits (164), Expect = 4.356e-13
Identity = 34/75 (45.33%), Postives = 48/75 (64.00%), Query Frame = 0 
Query:   64 IKAHKVILSACSDYFKEVFKDNPC-SHPVVILRDAAFADVEGLVRYVYRGEVDVQPERLQSFLKTAEVLRIKGLA 137
            IKAHKVILSACS  F+ +    P  +HP++ LR   F  +E L+ ++  GEV V  E L+ F+  AE L+IKG++
Sbjct:  250 IKAHKVILSACSPIFRSIIASAPIHTHPLIYLRGINFDHLELLLSFMDHGEVKVIQEELEDFISIAEELQIKGIS 324
[Close]
BLAST of broad-complex core protein partial vs. L. salmonis genes
Match: EMLSAG00000008770 (supercontig:LSalAtl2s:LSalAtl2s543:274592:275849:1 gene:EMLSAG00000008770 transcript:EMLSAT00000008770 description:"augustus-LSalAtl2s543-processed-gene-1.2")

HSP 1 Score: 100.523 bits (249), Expect = 5.438e-25
Identity = 48/114 (42.11%), Postives = 69/114 (60.53%), Query Frame = 0 
Query:   26 EHFCLKWNNYQTNIVSALGNLKLDEDFVDVTLSCEGRQIKAHKVILSACSDYFKEVFKDNPC-SHPVVILRDAAFADVEGLVRYVYRGEVDVQPERLQSFLKTAEVLRIKGLAD 138
            E  CL+WN Y++N      +L+ +E+  DVTL    + IKAHKVILSACS  F+ +    P  +HP++ LR   F  +E L+ ++Y GEV V  E L  F+  AE  +IKGL++
Sbjct:    5 ERLCLRWNEYESNFKQGFSDLRENEELFDVTLISGSKIIKAHKVILSACSPIFRSIIASAPIQTHPLIYLRGINFDHLELLLSFMYHGEVKVIQEELDDFISIAEEFQIKGLSN 118
[Close]
BLAST of broad-complex core protein partial vs. L. salmonis genes
Match: EMLSAG00000010252 (supercontig:LSalAtl2s:LSalAtl2s67:813352:817116:1 gene:EMLSAG00000010252 transcript:EMLSAT00000010252 description:"maker-LSalAtl2s67-augustus-gene-8.26")

HSP 1 Score: 101.679 bits (252), Expect = 8.655e-25
Identity = 46/114 (40.35%), Postives = 73/114 (64.04%), Query Frame = 0 
Query:   26 EHFCLKWNNYQTNIVSALGNLKLDEDFVDVTL-SCEGRQIKAHKVILSACSDYFKEVFKDNPCSHPVVILRDAAFADVEGLVRYVYRGEVDVQPERLQSFLKTAEVLRIKGLAD 138
            + +CLKWNN+  N+   L  L+  E FVDVTL + + + IK HK++LSA S Y +++  +NP  HP ++L    + D++ L+ ++Y GEV V+ + L   L  A+VL+IKGL +
Sbjct:    9 QQYCLKWNNHNKNVSGFLERLRTLEQFVDVTLFTADQKSIKCHKILLSASSVYLEDILSNNPSDHPTIVLSQIYYNDLKLLIDFMYAGEVFVEQDCLVKLLDAAKVLKIKGLYE 122
[Close]
BLAST of broad-complex core protein partial vs. L. salmonis genes
Match: EMLSAG00000010530 (supercontig:LSalAtl2s:LSalAtl2s69:565:4142:-1 gene:EMLSAG00000010530 transcript:EMLSAT00000010530 description:"snap-LSalAtl2s69-processed-gene-0.8")

HSP 1 Score: 101.293 bits (251), Expect = 2.930e-24
Identity = 48/114 (42.11%), Postives = 69/114 (60.53%), Query Frame = 0 
Query:   26 EHFCLKWNNYQTNIVSALGNLKLDEDFVDVTLSCEGRQIKAHKVILSACSDYFKEVFKDNPC-SHPVVILRDAAFADVEGLVRYVYRGEVDVQPERLQSFLKTAEVLRIKGLAD 138
            E  CL+WN Y++N      +L+ +E+  DVTL    + IKAHKVILSACS  F+ +    P  +HP++ LR   F  +E L+ ++Y GEV V  E L  F+  AE  +IKGL++
Sbjct:    5 ERLCLRWNEYESNFKQGFSDLRQNEELFDVTLISGSKIIKAHKVILSACSPIFRSIIASAPIQTHPLIYLRGINFDHLELLLSFMYHGEVKVIQEELDDFISIAEEFQIKGLSN 118

HSP 2 Score: 81.2629 bits (199), Expect = 1.726e-17
Identity = 41/105 (39.05%), Postives = 63/105 (60.00%), Query Frame = 0 
Query:   35 YQTNIVSALGNLKLDEDFVDVTLSCEGRQIKAHKVILSACSDYFKEVFKDNPC-SHPVVILRDAAFADVEGLVRYVYRGEVDVQPERLQSFLKTAEVLRIKGLAD 138
            ++  +     +L+ +E+  DVTL    + IKAHKVILSACS  F+ +    P  +HP++ LR   F  +E L+ ++Y GEV V  E L+ F+  AE  +IKGL++
Sbjct:  279 HENRVHKRFSDLRENEELFDVTLISGSKIIKAHKVILSACSPIFRSIIASAPIQTHPLIYLRGINFDHLELLLSFMYHGEVKVIQEELEDFISIAEEFQIKGLSN 383
[Close]
BLAST of broad-complex core protein partial vs. SwissProt
Match: gi|13124701|sp|Q01295.2|BRC1_DROME (RecName: Full=Broad-complex core protein isoforms 1/2/3/4/5)

HSP 1 Score: 171.014 bits (432), Expect = 4.328e-47
Identity = 71/114 (62.28%), Postives = 90/114 (78.95%), Query Frame = 0 
Query:   26 EHFCLKWNNYQTNIVSALGNLKLDEDFVDVTLSCEGRQIKAHKVILSACSDYFKEVFKDNPCSHPVVILRDAAFADVEGLVRYVYRGEVDVQPERLQSFLKTAEVLRIKGLADQ 139
            +HFCL+WNNYQ++I SA  NL+ DE FVDVTL+CEGR IKAH+V+LSACS YF+E+ K  PC HPV++L+D  F D+  LV ++Y GEV+V  + LQSFLKTAEVLR+ GL  Q
Sbjct:    5 QHFCLRWNNYQSSITSAFENLRDDEAFVDVTLACEGRSIKAHRVVLSACSPYFRELLKSTPCKHPVILLQDVNFMDLHALVEFIYHGEVNVHQKSLQSFLKTAEVLRVSGLTQQ 118
[Close]
BLAST of broad-complex core protein partial vs. SwissProt
Match: gi|13123979|sp|Q24206.2|BRC4_DROME (RecName: Full=Broad-complex core protein isoform 6)

HSP 1 Score: 171.785 bits (434), Expect = 5.157e-47
Identity = 71/114 (62.28%), Postives = 90/114 (78.95%), Query Frame = 0 
Query:   26 EHFCLKWNNYQTNIVSALGNLKLDEDFVDVTLSCEGRQIKAHKVILSACSDYFKEVFKDNPCSHPVVILRDAAFADVEGLVRYVYRGEVDVQPERLQSFLKTAEVLRIKGLADQ 139
            +HFCL+WNNYQ++I SA  NL+ DE FVDVTL+CEGR IKAH+V+LSACS YF+E+ K  PC HPV++L+D  F D+  LV ++Y GEV+V  + LQSFLKTAEVLR+ GL  Q
Sbjct:    5 QHFCLRWNNYQSSITSAFENLRDDEAFVDVTLACEGRSIKAHRVVLSACSPYFRELLKSTPCKHPVILLQDVNFMDLHALVEFIYHGEVNVHQKSLQSFLKTAEVLRVSGLTQQ 118
[Close]
BLAST of broad-complex core protein partial vs. SwissProt
Match: gi|29428067|sp|Q9W0K4.2|BAB2_DROME (RecName: Full=Protein bric-a-brac 2)

HSP 1 Score: 151.754 bits (382), Expect = 5.039e-40
Identity = 59/114 (51.75%), Postives = 87/114 (76.32%), Query Frame = 0 
Query:   25 NEHFCLKWNNYQTNIVSALGNLKLDEDFVDVTLSCEGRQIKAHKVILSACSDYFKEVFKDNPCSHPVVILRDAAFADVEGLVRYVYRGEVDVQPERLQSFLKTAEVLRIKGLAD 138
             + FCL+WNNYQ+N+ +    L   E FVDVTLSCEG  IKAHK++LSACS YF+ +F DNPC HP++I+RD +++D++ LV ++Y+GE++V  +++   LK AE L+I+GLA+
Sbjct:  195 GQQFCLRWNNYQSNLTNVFDELLQSESFVDVTLSCEGHSIKAHKMVLSACSPYFQALFYDNPCQHPIIIMRDVSWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAE 308
[Close]
BLAST of broad-complex core protein partial vs. SwissProt
Match: gi|73621174|sp|Q7KRI2.1|LOLAL_DROME (RecName: Full=Longitudinals lacking protein-like; Short=Lola-like protein; AltName: Full=Protein Batman)

HSP 1 Score: 135.961 bits (341), Expect = 8.162e-39
Identity = 57/123 (46.34%), Postives = 93/123 (75.61%), Query Frame = 0 
Query:   25 NEHFCLKWNNYQTNIVSALGNLKLDEDFVDVTLSCEGRQIKAHKVILSACSDYFKEVFKDNPCSHPVVILRDAAFADVEGLVRYVYRGEVDVQPERLQSFLKTAEVLRIKGLADQNLSSSNEG 147
            ++ F LKWN++QTN+V++  +L+ ++ F DVTL+CEG+  KAHK++LSACS YFK + ++NP  HP++IL+D ++  ++ ++ ++Y GEV+V  E+L +FLKTA+ L++KGLA+   S   EG
Sbjct:    5 DQQFFLKWNDFQTNMVTSFRHLRDEKSFTDVTLACEGQTCKAHKMVLSACSPYFKALLEENPSKHPIIILKDVSYIHLQAILEFMYAGEVNVSQEQLPAFLKTADRLKVKGLAETPSSIKREG 127
[Close]
BLAST of broad-complex core protein partial vs. SwissProt
Match: gi|29428068|sp|Q9W0K7.2|BAB1_DROME (RecName: Full=Protein bric-a-brac 1)

HSP 1 Score: 147.132 bits (370), Expect = 2.167e-38
Identity = 55/113 (48.67%), Postives = 87/113 (76.99%), Query Frame = 0 
Query:   26 EHFCLKWNNYQTNIVSALGNLKLDEDFVDVTLSCEGRQIKAHKVILSACSDYFKEVFKDNPCSHPVVILRDAAFADVEGLVRYVYRGEVDVQPERLQSFLKTAEVLRIKGLAD 138
            + FCL+WNNYQTN+ +    L  +E FVDVTL+C+GR +KAHK++LSACS YF+ +  + PC HP+VI+RD  ++D++ +V ++YRGE++V  +++   L+ AE+L+++GLAD
Sbjct:  100 QQFCLRWNNYQTNLTTIFDQLLQNECFVDVTLACDGRSMKAHKMVLSACSPYFQTLLAETPCQHPIVIMRDVNWSDLKAIVEFMYRGEINVSQDQIGPLLRIAEMLKVRGLAD 212
[Close]
BLAST of broad-complex core protein partial vs. SwissProt
Match: gi|27923726|sp|Q24174.2|ABRU_DROME (RecName: Full=Protein abrupt; AltName: Full=Protein clueless)

HSP 1 Score: 146.747 bits (369), Expect = 2.525e-38
Identity = 63/113 (55.75%), Postives = 87/113 (76.99%), Query Frame = 0 
Query:   28 FCLKWNNYQTNIVSALGNLKLDEDFVDVTLSCEGRQIKAHKVILSACSDYFKEVFKDNPCSHPVVILRDAAFADVEGLVRYVYRGEVDVQPERLQSFLKTAEVLRIKGLADQN 140
            + LKWN++Q++I+S+  +L+ +EDFVDVTL+C+ R   AHKV+LSACS YF+ + K NPC HP+VILRD    DVE L+ ++Y GEV+V  E+L  FLKTA +L+I+GLAD N
Sbjct:   78 YALKWNDFQSSILSSFRHLRDEEDFVDVTLACDERSFTAHKVVLSACSPYFRRLLKANPCEHPIVILRDVRCDDVENLLSFMYNGEVNVSHEQLPDFLKTAHLLQIRGLADVN 190
[Close]
BLAST of broad-complex core protein partial vs. SwissProt
Match: gi|47117851|sp|P42282.3|TTKA_DROME (RecName: Full=Protein tramtrack, alpha isoform; AltName: Full=Repressor protein fushi tarazu; AltName: Full=Tramtrack p88)

HSP 1 Score: 141.739 bits (356), Expect = 1.499e-36
Identity = 60/118 (50.85%), Postives = 86/118 (72.88%), Query Frame = 0 
Query:   23 MPNEHFCLKWNNYQTNIVSALGNLKLDEDFVDVTLSCEGRQIKAHKVILSACSDYFKEVFKDNPCSHPVVILRDAAFADVEGLVRYVYRGEVDVQPERLQSFLKTAEVLRIKGLADQN 140
            M ++ FCL+WNN+Q+N++S    L   E F DVTL+ EG+ +KAHK++LSACS YF  +F  +P  HP+VIL+D  ++D++ L+ ++YRGEV V  ERL +FL+ AE LRIKGL + N
Sbjct:    3 MASQRFCLRWNNHQSNLLSVFDQLLHAETFTDVTLAVEGQHLKAHKMVLSACSPYFNTLFVSHPEKHPIVILKDVPYSDMKSLLDFMYRGEVSVDQERLTAFLRVAESLRIKGLTEVN 120
[Close]
BLAST of broad-complex core protein partial vs. SwissProt
Match: gi|20455517|sp|P17789.2|TTKB_DROME (RecName: Full=Protein tramtrack, beta isoform; AltName: Full=Repressor protein fushi tarazu; AltName: Full=Tramtrack p69)

HSP 1 Score: 140.584 bits (353), Expect = 1.721e-36
Identity = 60/118 (50.85%), Postives = 86/118 (72.88%), Query Frame = 0 
Query:   23 MPNEHFCLKWNNYQTNIVSALGNLKLDEDFVDVTLSCEGRQIKAHKVILSACSDYFKEVFKDNPCSHPVVILRDAAFADVEGLVRYVYRGEVDVQPERLQSFLKTAEVLRIKGLADQN 140
            M ++ FCL+WNN+Q+N++S    L   E F DVTL+ EG+ +KAHK++LSACS YF  +F  +P  HP+VIL+D  ++D++ L+ ++YRGEV V  ERL +FL+ AE LRIKGL + N
Sbjct:    3 MASQRFCLRWNNHQSNLLSVFDQLLHAETFTDVTLAVEGQHLKAHKMVLSACSPYFNTLFVSHPEKHPIVILKDVPYSDMKSLLDFMYRGEVSVDQERLTAFLRVAESLRIKGLTEVN 120
[Close]
BLAST of broad-complex core protein partial vs. SwissProt
Match: gi|33112291|sp|Q8IN81.1|FRU_DROME (RecName: Full=Sex determination protein fruitless)

HSP 1 Score: 125.561 bits (314), Expect = 5.934e-31
Identity = 56/128 (43.75%), Postives = 83/128 (64.84%), Query Frame = 0 
Query:   13 SSPTNLGDSTMPNEHFCLKWNNYQTNIVSALGNLKLDEDFVDVTLSCEGRQIKAHKVILSACSDYFKEVFKDNPCSHPVVILRDAAFADVEGLVRYVYRGEVDVQPERLQSFLKTAEVLRIKGLADQN 140
            +SP    D    ++ FCL+WNN+ TN+   L +L   E   DVTL+CEG  +KAH+ ILSACS YF+ +F  N   HP++ L+D  ++++  L+ ++Y+GEV+V    L  FLKTAE L+++GL D N
Sbjct:   91 ASPRYNTDQGAMDQQFCLRWNNHPTNLTGVLTSLLQREALCDVTLACEGETVKAHQTILSACSPYFETIFLQNQHPHPIIYLKDVRYSEMRSLLDFMYKGEVNVGQSSLPMFLKTAESLQVRGLTDNN 218
[Close]
BLAST of broad-complex core protein partial vs. SwissProt
Match: gi|73920225|sp|P42284.2|LOLA2_DROME (RecName: Full=Longitudinals lacking protein, isoforms H/M/V)

HSP 1 Score: 123.635 bits (309), Expect = 1.270e-30
Identity = 50/114 (43.86%), Postives = 80/114 (70.18%), Query Frame = 0 
Query:   25 NEHFCLKWNNYQTNIVSALGNLKLDEDFVDVTLSCEGRQIKAHKVILSACSDYFKEVFKDNPCSHPVVILRDAAFADVEGLVRYVYRGEVDVQPERLQSFLKTAEVLRIKGLAD 138
            ++ FCL+WNN+Q+ ++S    L  +E  VD TL+ EG+ +KAHKV+LSACS YF  + ++    HP+ IL+D  + ++  ++ Y+YRGEV++  ++L + LK AE L+IKGL+D
Sbjct:    4 DQQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQYDKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSD 117
[Close]
BLAST of broad-complex core protein partial vs. nr
Match: gi|1325334177|ref|XP_023348920.1| (longitudinals lacking protein-like, partial [Eurytemora affinis])

HSP 1 Score: 169.088 bits (427), Expect = 9.273e-49
Identity = 77/131 (58.78%), Postives = 103/131 (78.63%), Query Frame = 0 
Query:   23 MPNEHFCLKWNNYQTNIVSALGNLKLDEDFVDVTLSCEGRQIKAHKVILSACSDYFKEVFKDNPCSHPVVILRDAAFADVEGLVRYVYRGEVDVQPERLQSFLKTAEVLRIKGLADQN--LSSSNEGIKKE 151
            M ++ FCLKWNNYQT++V AL  LK+ E+ VDVTLSCEGR++ AHK+ILSACS YFK++FK+NPC HPVVIL+D  + D+E LV+Y+Y G+V +  ++L  FLKTAE L++KGLA QN  +SSS +  + E
Sbjct:    1 MGSDQFCLKWNNYQTSMVQALEMLKMSEELVDVTLSCEGRRMSAHKIILSACSQYFKDIFKENPCQHPVVILKDVRYIDLESLVKYMYAGQVYIAQDQLGRFLKTAETLQVKGLA-QNPFISSSTDDAQCE 130
[Close]
BLAST of broad-complex core protein partial vs. nr
Match: gi|820836211|ref|XP_003690167.2| (PREDICTED: broad-complex core protein isoforms 1/2/3/4/5-like [Apis florea])

HSP 1 Score: 167.548 bits (423), Expect = 1.390e-48
Identity = 70/117 (59.83%), Postives = 92/117 (78.63%), Query Frame = 0 
Query:   23 MPNEHFCLKWNNYQTNIVSALGNLKLDEDFVDVTLSCEGRQIKAHKVILSACSDYFKEVFKDNPCSHPVVILRDAAFADVEGLVRYVYRGEVDVQPERLQSFLKTAEVLRIKGLADQ 139
            +  +HFCL+WNNYQ++I SA  NL+ DEDFVDVTL+C+GR +KAH+V+LSACS YF+E+ K  PC HPV++L+D AF+D+  LV ++Y GEV+V    L SFLKTAEVLR+ GL  Q
Sbjct:    2 VDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACDGRSLKAHRVVLSACSPYFRELLKSTPCKHPVIVLQDVAFSDLHALVEFIYHGEVNVHQRSLSSFLKTAEVLRVSGLTQQ 118
[Close]
BLAST of broad-complex core protein partial vs. nr
Match: gi|677569971|gb|AIM47237.1| (broad-complex, partial [Diploptera punctata])

HSP 1 Score: 168.703 bits (426), Expect = 1.658e-48
Identity = 70/114 (61.40%), Postives = 91/114 (79.82%), Query Frame = 0 
Query:   26 EHFCLKWNNYQTNIVSALGNLKLDEDFVDVTLSCEGRQIKAHKVILSACSDYFKEVFKDNPCSHPVVILRDAAFADVEGLVRYVYRGEVDVQPERLQSFLKTAEVLRIKGLADQ 139
            +HFCL+WNNYQ++I SA  NL+ DEDFVDVTL+C+G+ +KAH+V+LSACS YF+E+ K  PC HPV++L+D AFAD+  LV ++Y GEV+V    L SFLKTAEVLR+ GL  Q
Sbjct:    5 QHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACDGKSLKAHRVVLSACSPYFRELLKSTPCKHPVIVLQDVAFADLHALVEFIYHGEVNVHQRNLSSFLKTAEVLRVSGLTQQ 118
[Close]
BLAST of broad-complex core protein partial vs. nr
Match: gi|389614443|dbj|BAM20269.1| (broad-complex, partial [Papilio xuthus])

HSP 1 Score: 166.777 bits (421), Expect = 4.252e-48
Identity = 69/114 (60.53%), Postives = 90/114 (78.95%), Query Frame = 0 
Query:   23 MPNEHFCLKWNNYQTNIVSALGNLKLDEDFVDVTLSCEGRQIKAHKVILSACSDYFKEVFKDNPCSHPVVILRDAAFADVEGLVRYVYRGEVDVQPERLQSFLKTAEVLRIKGL 136
            +  +HFCL+WNNYQ++I SA  NL+ DEDFVDVTL+C+GR +KAH+V+LSACS YF+E+ K  PC HPV++L+D AF D+  LV ++Y GEV+V    L SFLKTAEVLR+ GL
Sbjct:    2 VDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACDGRSLKAHRVVLSACSPYFRELLKSTPCKHPVIVLQDVAFTDLNALVEFIYHGEVNVHQRSLSSFLKTAEVLRVSGL 115
[Close]
BLAST of broad-complex core protein partial vs. nr
Match: gi|313760436|dbj|BAJ41248.1| (broad-complex isoform A-NZe [Frankliniella occidentalis] >gi|313760452|dbj|BAJ41256.1| broad-complex isoform B-NZe [Frankliniella occidentalis])

HSP 1 Score: 174.096 bits (440), Expect = 4.652e-48
Identity = 70/117 (59.83%), Postives = 94/117 (80.34%), Query Frame = 0 
Query:   23 MPNEHFCLKWNNYQTNIVSALGNLKLDEDFVDVTLSCEGRQIKAHKVILSACSDYFKEVFKDNPCSHPVVILRDAAFADVEGLVRYVYRGEVDVQPERLQSFLKTAEVLRIKGLADQ 139
            M ++HFCL+WNNYQ++I SA  NL+ DEDFVDVT++C+G+ +KAH+V+LSACS YF+E+ K  PC HPV++L+D AFAD++ LV ++Y GEV+V    L SFLKTAEVLR+ GL  Q
Sbjct:    1 MESQHFCLRWNNYQSSITSAFENLRDDEDFVDVTIACDGKSLKAHRVVLSACSPYFRELLKSTPCKHPVIVLQDVAFADLDALVEFIYHGEVNVHQRNLTSFLKTAEVLRVSGLTQQ 117
[Close]
BLAST of broad-complex core protein partial vs. nr
Match: gi|1228015131|ref|XP_021939535.1| (broad-complex core protein isoforms 1/2/3/4/5 isoform X11 [Zootermopsis nevadensis] >gi|1228015133|ref|XP_021939536.1| broad-complex core protein isoforms 1/2/3/4/5 isoform X11 [Zootermopsis nevadensis])

HSP 1 Score: 174.481 bits (441), Expect = 5.157e-48
Identity = 71/119 (59.66%), Postives = 92/119 (77.31%), Query Frame = 0 
Query:   21 STMPNEHFCLKWNNYQTNIVSALGNLKLDEDFVDVTLSCEGRQIKAHKVILSACSDYFKEVFKDNPCSHPVVILRDAAFADVEGLVRYVYRGEVDVQPERLQSFLKTAEVLRIKGLADQ 139
            S    +HFCL+WNNYQ++I SA  NL+ DEDFVDVTL+C+G+ +KAH+V+LSACS YF+E+ K  PC HPV++L+D AFAD+  LV ++Y GEV+V    L SFLKTAEVLR+ GL  Q
Sbjct:    2 SMADTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACDGKSLKAHRVVLSACSPYFRELLKSTPCKHPVIVLQDVAFADLHALVEFIYHGEVNVHQRNLTSFLKTAEVLRVSGLTQQ 120
[Close]
BLAST of broad-complex core protein partial vs. nr
Match: gi|313760432|dbj|BAJ41246.1| (broad-complex isoform A-NZc [Frankliniella occidentalis] >gi|313760448|dbj|BAJ41254.1| broad-complex isoform B-NZc [Frankliniella occidentalis])

HSP 1 Score: 174.481 bits (441), Expect = 5.546e-48
Identity = 70/117 (59.83%), Postives = 94/117 (80.34%), Query Frame = 0 
Query:   23 MPNEHFCLKWNNYQTNIVSALGNLKLDEDFVDVTLSCEGRQIKAHKVILSACSDYFKEVFKDNPCSHPVVILRDAAFADVEGLVRYVYRGEVDVQPERLQSFLKTAEVLRIKGLADQ 139
            M ++HFCL+WNNYQ++I SA  NL+ DEDFVDVT++C+G+ +KAH+V+LSACS YF+E+ K  PC HPV++L+D AFAD++ LV ++Y GEV+V    L SFLKTAEVLR+ GL  Q
Sbjct:    1 MESQHFCLRWNNYQSSITSAFENLRDDEDFVDVTIACDGKSLKAHRVVLSACSPYFRELLKSTPCKHPVIVLQDVAFADLDALVEFIYHGEVNVHQRNLTSFLKTAEVLRVSGLTQQ 117
[Close]
BLAST of broad-complex core protein partial vs. nr
Match: gi|313760434|dbj|BAJ41247.1| (broad-complex isoform A-NZd [Frankliniella occidentalis] >gi|313760450|dbj|BAJ41255.1| broad-complex isoform B-NZd [Frankliniella occidentalis])

HSP 1 Score: 174.096 bits (440), Expect = 6.562e-48
Identity = 70/117 (59.83%), Postives = 94/117 (80.34%), Query Frame = 0 
Query:   23 MPNEHFCLKWNNYQTNIVSALGNLKLDEDFVDVTLSCEGRQIKAHKVILSACSDYFKEVFKDNPCSHPVVILRDAAFADVEGLVRYVYRGEVDVQPERLQSFLKTAEVLRIKGLADQ 139
            M ++HFCL+WNNYQ++I SA  NL+ DEDFVDVT++C+G+ +KAH+V+LSACS YF+E+ K  PC HPV++L+D AFAD++ LV ++Y GEV+V    L SFLKTAEVLR+ GL  Q
Sbjct:    1 MESQHFCLRWNNYQSSITSAFENLRDDEDFVDVTIACDGKSLKAHRVVLSACSPYFRELLKSTPCKHPVIVLQDVAFADLDALVEFIYHGEVNVHQRNLTSFLKTAEVLRVSGLTQQ 117
[Close]
BLAST of broad-complex core protein partial vs. nr
Match: gi|1228015135|ref|XP_021939537.1| (broad-complex core protein isoforms 1/2/3/4/5 isoform X12 [Zootermopsis nevadensis])

HSP 1 Score: 174.096 bits (440), Expect = 6.632e-48
Identity = 71/119 (59.66%), Postives = 92/119 (77.31%), Query Frame = 0 
Query:   21 STMPNEHFCLKWNNYQTNIVSALGNLKLDEDFVDVTLSCEGRQIKAHKVILSACSDYFKEVFKDNPCSHPVVILRDAAFADVEGLVRYVYRGEVDVQPERLQSFLKTAEVLRIKGLADQ 139
            S    +HFCL+WNNYQ++I SA  NL+ DEDFVDVTL+C+G+ +KAH+V+LSACS YF+E+ K  PC HPV++L+D AFAD+  LV ++Y GEV+V    L SFLKTAEVLR+ GL  Q
Sbjct:    2 SMADTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACDGKSLKAHRVVLSACSPYFRELLKSTPCKHPVIVLQDVAFADLHALVEFIYHGEVNVHQRNLTSFLKTAEVLRVSGLTQQ 120
[Close]
BLAST of broad-complex core protein partial vs. nr
Match: gi|313760428|dbj|BAJ41244.1| (broad-complex isoform A-NZa [Frankliniella occidentalis] >gi|313760444|dbj|BAJ41252.1| broad-complex isoform B-NZa [Frankliniella occidentalis])

HSP 1 Score: 175.252 bits (443), Expect = 6.888e-48
Identity = 70/117 (59.83%), Postives = 94/117 (80.34%), Query Frame = 0 
Query:   23 MPNEHFCLKWNNYQTNIVSALGNLKLDEDFVDVTLSCEGRQIKAHKVILSACSDYFKEVFKDNPCSHPVVILRDAAFADVEGLVRYVYRGEVDVQPERLQSFLKTAEVLRIKGLADQ 139
            M ++HFCL+WNNYQ++I SA  NL+ DEDFVDVT++C+G+ +KAH+V+LSACS YF+E+ K  PC HPV++L+D AFAD++ LV ++Y GEV+V    L SFLKTAEVLR+ GL  Q
Sbjct:    1 MESQHFCLRWNNYQSSITSAFENLRDDEDFVDVTIACDGKSLKAHRVVLSACSPYFRELLKSTPCKHPVIVLQDVAFADLDALVEFIYHGEVNVHQRNLTSFLKTAEVLRVSGLTQQ 117
The following BLAST results are available for this feature:
BLAST of broad-complex core protein partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25
Match NameE-valueIdentityDescription
EMLSAG000000092432.389e-2642.34supercontig:LSalAtl2s:LSalAtl2s588:73133:77912:1 g... [more]
EMLSAG000000087722.925e-2542.11supercontig:LSalAtl2s:LSalAtl2s543:279105:281214:-... [more]
EMLSAG000000087705.438e-2542.11supercontig:LSalAtl2s:LSalAtl2s543:274592:275849:1... [more]
EMLSAG000000102528.655e-2540.35supercontig:LSalAtl2s:LSalAtl2s67:813352:817116:1 ... [more]
EMLSAG000000105302.930e-2442.11supercontig:LSalAtl2s:LSalAtl2s69:565:4142:-1 gene... [more]

Pages

back to top
BLAST of broad-complex core protein partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|13124701|sp|Q01295.2|BRC1_DROME4.328e-4762.28RecName: Full=Broad-complex core protein isoforms ... [more]
gi|13123979|sp|Q24206.2|BRC4_DROME5.157e-4762.28RecName: Full=Broad-complex core protein isoform 6[more]
gi|29428067|sp|Q9W0K4.2|BAB2_DROME5.039e-4051.75RecName: Full=Protein bric-a-brac 2[more]
gi|73621174|sp|Q7KRI2.1|LOLAL_DROME8.162e-3946.34RecName: Full=Longitudinals lacking protein-like; ... [more]
gi|29428068|sp|Q9W0K7.2|BAB1_DROME2.167e-3848.67RecName: Full=Protein bric-a-brac 1[more]
gi|27923726|sp|Q24174.2|ABRU_DROME2.525e-3855.75RecName: Full=Protein abrupt; AltName: Full=Protei... [more]
gi|47117851|sp|P42282.3|TTKA_DROME1.499e-3650.85RecName: Full=Protein tramtrack, alpha isoform; Al... [more]
gi|20455517|sp|P17789.2|TTKB_DROME1.721e-3650.85RecName: Full=Protein tramtrack, beta isoform; Alt... [more]
gi|33112291|sp|Q8IN81.1|FRU_DROME5.934e-3143.75RecName: Full=Sex determination protein fruitless[more]
gi|73920225|sp|P42284.2|LOLA2_DROME1.270e-3043.86RecName: Full=Longitudinals lacking protein, isofo... [more]

Pages

back to top
BLAST of broad-complex core protein partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1325334177|ref|XP_023348920.1|9.273e-4958.78longitudinals lacking protein-like, partial [Euryt... [more]
gi|820836211|ref|XP_003690167.2|1.390e-4859.83PREDICTED: broad-complex core protein isoforms 1/2... [more]
gi|677569971|gb|AIM47237.1|1.658e-4861.40broad-complex, partial [Diploptera punctata][more]
gi|389614443|dbj|BAM20269.1|4.252e-4860.53broad-complex, partial [Papilio xuthus][more]
gi|313760436|dbj|BAJ41248.1|4.652e-4859.83broad-complex isoform A-NZe [Frankliniella occiden... [more]
gi|1228015131|ref|XP_021939535.1|5.157e-4859.66broad-complex core protein isoforms 1/2/3/4/5 isof... [more]
gi|313760432|dbj|BAJ41246.1|5.546e-4859.83broad-complex isoform A-NZc [Frankliniella occiden... [more]
gi|313760434|dbj|BAJ41247.1|6.562e-4859.83broad-complex isoform A-NZd [Frankliniella occiden... [more]
gi|1228015135|ref|XP_021939537.1|6.632e-4859.66broad-complex core protein isoforms 1/2/3/4/5 isof... [more]
gi|313760428|dbj|BAJ41244.1|6.888e-4859.83broad-complex isoform A-NZa [Frankliniella occiden... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold202_size261857supercontigscaffold202_size261857:165864..167462 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold202_size261857-snap-gene-1.21-mRNA-1maker-scaffold202_size261857-snap-gene-1.21-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold202_size261857:165864..167462+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold202_size261857-snap-gene-1.21 ID=maker-scaffold202_size261857-snap-gene-1.21|Name=broad-complex core protein partial|organism=Tigriopus kingsejongensis|type=gene|length=1599bp|location=Sequence derived from alignment at scaffold202_size261857:165864..167462+ (Tigriopus kingsejongensis)
GCTTCTTTCACTCTCTCCATACTGGGAGTTAGTGGCAAAAAAAGGCCAGC
AGACCTACAACAGGCAGAAAGAGGTGGCCACAAATTTAAAACTGTGAGTG
TTCTAGAGATTGGGTGCCAATTTCACCCCCCAAATCGCAACCCTCAGACC
GTGTTCCACCCTAAAGTGATCCCCACATTTTGCAAATCCCAGTACAGCGA
CCATGGACTCGACCAACGATTCCCGTTGCCATGCTTTTGAAAGCTTTGCT
TCACGCTAATTGAGAAAGGGTCAAATTTCCATGAACCATCAACGACTCCC
CCAATAGGCAGTCATGCCGAGCAACGGAGCAAGTTTGCTGTTTGGCACCG
TAATCTGACTCGCGATCTAATCCAGTGCTTCCATTTCAGCCTTCTAGTCC
GAACGGGGCATTACTTTGAACCTAAGATCAACAAAATTCTAGTGATTGAA
GGAAAGTGCCACCAGAAACTGCCACAACTATTTTTTTCTGTGCGTGTTTG
CCCACCAAGAATGCATTCAACCATTATTGCCAATCTAGCCCAACTAACTT
AGGAGATTCCACCATGCCGAATGAACATTTCTGTCTCAAGTGGAACAATT
ATCAAACCAACATTGTATCAGCATTAGGAAACTTGAAACTTGACGAAGAT
TTTGTCGATGTGACTCTCTCTTGCGAGGGCCGCCAGATCAAGGCCCACAA
AGTCATACTCTCAGCCTGCAGTGACTACTTCAAAGAGGTCTTTAAGGTAG
GTCATCAAGGGAGTCCACATTTGCAGTCCGACGACCAGTGCACTCATGGG
CCGTCGTTCCATTCCAGGATAATCCTTGTTCTCACCCTGTGGTCATCCTG
AGGGATGCTGCCTTTGCCGATGTCGAGGGATTGGTCCGATATGTTTACCG
AGGTGAGGTGGACGTCCAACCCGAGCGCCTCCAGAGCTTTTTGAAGACTG
CCGAGGTCTTGCGGATTAAGGGTTTGGCCGACCAAAATTTGTCTTCATCT
AATGAGGGGATCAAGAAGGAGGTAAGGAGAGTCAGAGGCCAACATGGACC
ACCGTAACAGGGAGGAGGGGGTCAATGGATAGTGGAAGTCGCTGACTTGG
TCTTTGATTGATTATCCACCTTTTGGAAAAGTAGGGACACCCTAAAGTTC
TCTTGTTTTTCCAGGAGCCACTCCTCAGCCCGACTCTGCTGAATGGCGCC
CAGTTGGCCCACTCCATTCACCAGCAATATCAGCAGCCAGCACCCCATTT
CCAACTCACCTCGCCGCAAACCAGCCCACATATCAACCTTCCGCGACCTC
TTCTCAACTCCCCGATCAAGGTCCCGGTTCCACCCACTCTGAAGCGTACC
AGTTCCAATAATTTCACATCCCTAGCTCAGTACCTGTCGGGCTCGCCGAC
CCCTGCCTCACCCATATCACCCCCAGCCCTTGCCAGCGACACTCCGGTGT
CGAAGCGTCGAAAGACCACCCCGAGACGACATGAGAGTGGAAGTGGCTAC
CTTAAACAGCCCACTCCACCCCACTACTCGGGCTCCATCTCGTCTTTGAC
AGCTTCCCCGGCTTCACCCCCACATTCCAACTCCACGGAGGGCGGCGAT
back to top
Synonyms
The feature 'broad-complex core protein partial' has the following synonyms
Synonym
Tk10171
Add to Basket