60s ribosomal protein l23a, maker-scaffold245_size240363-snap-gene-1.26 (gene) Tigriopus kingsejongensis

Overview
Name60s ribosomal protein l23a
Unique Namemaker-scaffold245_size240363-snap-gene-1.26
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of 60s ribosomal protein l23a vs. L. salmonis genes
Match: EMLSAG00000006826 (supercontig:LSalAtl2s:LSalAtl2s384:78188:79034:-1 gene:EMLSAG00000006826 transcript:EMLSAT00000006826 description:"maker-LSalAtl2s384-snap-gene-1.10")

HSP 1 Score: 209.92 bits (533), Expect = 1.007e-70
Identity = 103/138 (74.64%), Postives = 121/138 (87.68%), Query Frame = 0 
Query:   43 QKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            QKA+K+QKKVVKGTHGTRVKKVRT+VHFKRP+T+RP R PK+PRK+  +RNRMDA+NIIKHPLTTESAMKKIEDNNTLVFI N++ANK+QIK++VKKLY+I+V+           KKAYV+LA DYDALDVANKIGII
Sbjct:   19 QKARKIQKKVVKGTHGTRVKKVRTTVHFKRPRTYRPTRDPKYPRKSTAKRNRMDAHNIIKHPLTTESAMKKIEDNNTLVFITNVRANKYQIKSAVKKLYEISVS-----------KKAYVKLAPDYDALDVANKIGII 145
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BLAST of 60s ribosomal protein l23a vs. L. salmonis genes
Match: EMLSAG00000004928 (supercontig:LSalAtl2s:LSalAtl2s259:302906:313875:1 gene:EMLSAG00000004928 transcript:EMLSAT00000004928 description:"snap_masked-LSalAtl2s259-processed-gene-3.3")

HSP 1 Score: 112.464 bits (280), Expect = 3.664e-33
Identity = 50/75 (66.67%), Postives = 66/75 (88.00%), Query Frame = 0 
Query:   62 KKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKAS 136
            KKVRT+VHFK P+T+RP R PK+PRK+  + N +DA+NI+KHPLT+ES MKKIE+NNTLVFI NI+ANK+Q+K++
Sbjct:    6 KKVRTTVHFKAPRTYRPTRDPKYPRKSTVKWNHIDAHNIVKHPLTSESPMKKIENNNTLVFITNIRANKYQLKST 80
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BLAST of 60s ribosomal protein l23a vs. SwissProt
Match: gi|51338615|sp|P62752.1|RL23A_RAT (RecName: Full=60S ribosomal protein L23a >gi|51338637|sp|P62750.1|RL23A_HUMAN RecName: Full=60S ribosomal protein L23a; AltName: Full=Large ribosomal subunit protein uL23 >gi|51338638|sp|P62751.1|RL23A_MOUSE RecName: Full=60S ribosomal protein L23a >gi|108860929|sp|Q24JY1.1|RL23A_BOVIN RecName: Full=60S ribosomal protein L23a)

HSP 1 Score: 198.749 bits (504), Expect = 8.350e-65
Identity = 98/126 (77.78%), Postives = 110/126 (87.30%), Query Frame = 0 
Query:   55 GTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            G H  + KK+RTS  F+RPKT R  RQPK+PRK+ PRRN++D Y IIK PLTTESAMKKIEDNNTLVFI ++KANKHQIK +VKKLYDI+VAKVNTLIRPDG+KKAYVRLA DYDALDVANKIGII
Sbjct:   31 GVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 156
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BLAST of 60s ribosomal protein l23a vs. SwissProt
Match: gi|1350713|sp|P48162.1|R23A1_CAEEL (RecName: Full=60S ribosomal protein L23a 1)

HSP 1 Score: 176.792 bits (447), Expect = 3.570e-56
Identity = 90/147 (61.22%), Postives = 113/147 (76.87%), Query Frame = 0 
Query:   34 AKKAPVRSVQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            A  AP ++  KA   +KKVVKG   T  ++VRTSVHF+RP T +  RQ +FPRK+ P+ ++MD + II+HPLTTESAMKKIE++NTLVFI +  ANK+QIK +V KLY++   KVNTLI P  QKKAYVRL +DYDALDVANKIG+I
Sbjct:    2 APSAPAKTA-KALDAKKKVVKGKRTTHRRQVRTSVHFRRPVTLKTARQARFPRKSAPKTSKMDHFRIIQHPLTTESAMKKIEEHNTLVFIVSNDANKYQIKDAVHKLYNVQALKVNTLITPLQQKKAYVRLTADYDALDVANKIGVI 147
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BLAST of 60s ribosomal protein l23a vs. SwissProt
Match: gi|1350700|sp|P48045.1|RL25_KLULA (RecName: Full=60S ribosomal protein L25)

HSP 1 Score: 174.096 bits (440), Expect = 3.719e-55
Identity = 79/137 (57.66%), Postives = 108/137 (78.83%), Query Frame = 0 
Query:   44 KAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            KA   +K VVKGT+G +  KVRTS  F+ PKT +  R PK+  KA+P  NR+D+Y +I+ P+T+E+AMKK+ED NTLVF  ++KANK+QIK +VK+LY+++V  VNTL+RP+G KKAYVRL +D+DALD+AN+IG I
Sbjct:    6 KATAAKKAVVKGTNGKKALKVRTSASFRLPKTLKLARSPKYATKAVPHYNRLDSYKVIEQPITSETAMKKVEDGNTLVFKVSLKANKYQIKKAVKELYEVDVLSVNTLVRPNGTKKAYVRLTADFDALDIANRIGYI 142
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BLAST of 60s ribosomal protein l23a vs. SwissProt
Match: gi|132823|sp|P08792.1|RL25_CYBJA (RecName: Full=60S ribosomal protein L25)

HSP 1 Score: 170.629 bits (431), Expect = 8.654e-54
Identity = 81/137 (59.12%), Postives = 105/137 (76.64%), Query Frame = 0 
Query:   44 KAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            KA   +K VVKG++G++  KVRTS  F+ PKT +  R PK+ RKA+P   R+D Y +I  P+ +E+AMKK+ED NTLVF  +IKANKHQIK +VK LY+++V  VNTLIRP+G KKAYVRL +D+DALD+ANKIG I
Sbjct:    6 KAASAKKAVVKGSNGSKALKVRTSTTFRLPKTLKLTRAPKYARKAVPHYQRLDNYKVIVAPIASETAMKKVEDGNTLVFQVDIKANKHQIKQAVKDLYEVDVLAVNTLIRPNGTKKAYVRLTADHDALDIANKIGYI 142
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BLAST of 60s ribosomal protein l23a vs. SwissProt
Match: gi|2500306|sp|Q20647.1|R23A2_CAEEL (RecName: Full=60S ribosomal protein L23a 2)

HSP 1 Score: 168.703 bits (426), Expect = 5.001e-53
Identity = 86/139 (61.87%), Postives = 105/139 (75.54%), Query Frame = 0 
Query:   42 VQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            V KA + +K VVKG+     K VRTSVHF+RPKT    R P++ RK+ P R+++D++ +IK P TTES+MKKIED+NTLVFI + KANKH IK +V  LY++   KVNTLI P  QKKAYVRLASDYDALDVANKIG I
Sbjct:    8 VGKAIQAKKAVVKGSKTNVRKNVRTSVHFRRPKTLVTARAPRYARKSAPARDKLDSFAVIKAPHTTESSMKKIEDHNTLVFIVDEKANKHHIKRAVHALYNVKAVKVNTLITPLQQKKAYVRLASDYDALDVANKIGFI 146
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BLAST of 60s ribosomal protein l23a vs. SwissProt
Match: gi|1710524|sp|P04456.4|RL25_YEAST (RecName: Full=60S ribosomal protein L25; AltName: Full=Large ribosomal subunit protein uL23; AltName: Full=RP16L; AltName: Full=YL25; AltName: Full=YP42')

HSP 1 Score: 165.236 bits (417), Expect = 8.985e-52
Identity = 74/126 (58.73%), Postives = 101/126 (80.16%), Query Frame = 0 
Query:   55 GTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            GT+G +  KVRTS  F+ PKT +  R PK+  KA+P  NR+D+Y +I+ P+T+E+AMKK+ED N LVF  ++KANK+QIK +VK+LY+++V KVNTL+RP+G KKAYVRL +DYDALD+AN+IG I
Sbjct:   17 GTNGKKALKVRTSATFRLPKTLKLARAPKYASKAVPHYNRLDSYKVIEQPITSETAMKKVEDGNILVFQVSMKANKYQIKKAVKELYEVDVLKVNTLVRPNGTKKAYVRLTADYDALDIANRIGYI 142
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BLAST of 60s ribosomal protein l23a vs. SwissProt
Match: gi|6093882|sp|O74391.1|RL25B_SCHPO (RecName: Full=60S ribosomal protein L25-B)

HSP 1 Score: 164.851 bits (416), Expect = 1.408e-51
Identity = 80/140 (57.14%), Postives = 106/140 (75.71%), Query Frame = 0 
Query:   41 SVQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            SV KA+  QK V KG H    +KVRTS  F+RPKT    R+PK+ RK++P  +R+D Y II +P+ +ESAMKKIED+NTLVF  ++KANK  IK +VKKLY ++  K+NTLIRP+G KKA+V+L++D DALDVAN+IG +
Sbjct:    2 SVGKAKGAQKTVQKGIHNKVARKVRTSTTFRRPKTLELARKPKYARKSVPHASRLDEYKIIVNPINSESAMKKIEDDNTLVFHVHLKANKFTIKNAVKKLYSVDAVKINTLIRPNGTKKAFVKLSADADALDVANRIGFL 141
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BLAST of 60s ribosomal protein l23a vs. SwissProt
Match: gi|2507312|sp|P51997.2|RL25_PUCGR (RecName: Full=60S ribosomal protein L25)

HSP 1 Score: 164.851 bits (416), Expect = 2.200e-51
Identity = 78/126 (61.90%), Postives = 97/126 (76.98%), Query Frame = 0 
Query:   55 GTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            GT     +++RTSV F+RPKT R  R+PK+PR ++P   RMDAY  +  PL TESAMKKIEDNNTL+FI ++KANK QI  +VKKLYD+   +VNTLIRPDG+KKA+VRL  + DALD+ANKIG I
Sbjct:   33 GTSSKTQRRIRTSVTFRRPKTLRLSRKPKYPRTSVPHAPRMDAYRTLVRPLNTESAMKKIEDNNTLLFIVDLKANKRQIADAVKKLYDVTPLRVNTLIRPDGKKKAFVRLTPEVDALDIANKIGFI 158
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BLAST of 60s ribosomal protein l23a vs. SwissProt
Match: gi|49036456|sp|Q9AT35.1|RL23A_DAUCA (RecName: Full=60S ribosomal protein L23a)

HSP 1 Score: 163.31 bits (412), Expect = 9.045e-51
Identity = 91/138 (65.94%), Postives = 106/138 (76.81%), Query Frame = 0 
Query:   44 KAQKVQKKVVKGTHGTR-VKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            +A K  K V  GT   + VKK+RTSV F RP+T    R PK+PR +   RN++D Y I+K+PLTTESAMKKIEDNNTLVFI +I+ANK +IK +VKK+YDI   KVNTLIRPDG KKAYVRL  DYDALDVANKIGII
Sbjct:   17 QALKTAKAVKSGTTKFKKVKKIRTSVTFHRPRTLTKDRNPKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
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BLAST of 60s ribosomal protein l23a vs. SwissProt
Match: gi|3122703|sp|O22644.1|RL23A_FRIAG (RecName: Full=60S ribosomal protein L23A)

HSP 1 Score: 161.384 bits (407), Expect = 5.416e-50
Identity = 92/139 (66.19%), Postives = 109/139 (78.42%), Query Frame = 0 
Query:   44 KAQKVQKKVVKG--THGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            +A KV K V  G  T   + KK+RTSV F RPKT +  R PK+PR + P RN++D Y I+K+PLTTESAMKKIEDNNTLVFI +I+A+K +IKA+VKK+YDI   KVNTLIRPDG KKAYVRL  DYDALD+ANKIGII
Sbjct:   16 QALKVAKAVKSGVSTLQKKAKKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKAAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDIANKIGII 154
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BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|1325282909|ref|XP_023326153.1| (60S ribosomal protein L23a-like [Eurytemora affinis])

HSP 1 Score: 269.626 bits (688), Expect = 7.166e-90
Identity = 137/169 (81.07%), Postives = 151/169 (89.35%), Query Frame = 0 
Query:   12 KGKKPVPKKTAEKKAEDKEAKPAKKAPVRSVQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            KG KP PKK AEKKA D+  +   KAPV++V KA+++QKKVVKG HGTRVKKVRTSV F RPKTFR  R PK+PRK+ PRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFIC+IKANKHQ+KA+VKKLYDINV+KVNTL+RPDGQKKAYVRLA DYDALDVANKIGII
Sbjct:   18 KGSKPAPKKVAEKKAGDEGTE---KAPVKAVIKARRMQKKVVKGLHGTRVKKVRTSVKFYRPKTFRCPRAPKYPRKSTPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICDIKANKHQVKAAVKKLYDINVSKVNTLVRPDGQKKAYVRLAPDYDALDVANKIGII 183
[Close]
BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|961375772|gb|ALS04630.1| (60S ribosomal protein L23a [Pseudodiaptomus poplesia] >gi|961375774|gb|ALS04631.1| 60S ribosomal protein L23a [Pseudodiaptomus poplesia] >gi|1148369164|gb|AQS22818.1| 60S ribosomal protein l23a [Pseudodiaptomus poplesia])

HSP 1 Score: 266.929 bits (681), Expect = 7.218e-89
Identity = 141/185 (76.22%), Postives = 154/185 (83.24%), Query Frame = 0 
Query:    1 MAPKK-----DVEAPPKGKKPVPKKTAEKKAEDKEAKPAKKAPVRSVQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            MAPKK     D     KG KP PKK +EKKA+DK     +KAP ++V KA K QK+VVKG HGTRVKKVRTSV F RPKTFRP R PK+PRK+ PRRNRMDAY+IIKHPLTTESAMKKIEDNNTLVFI +IKANKHQIKA+V KLYDI+V+KVNTLIRPDGQKKAYVRLA DYDALDVANKIGII
Sbjct:    1 MAPKKPAASKDAPKAAKGAKPAPKKVSEKKADDK----GEKAPPKAVTKALKTQKRVVKGVHGTRVKKVRTSVKFYRPKTFRPQRTPKYPRKSTPRRNRMDAYSIIKHPLTTESAMKKIEDNNTLVFITDIKANKHQIKAAVGKLYDISVSKVNTLIRPDGQKKAYVRLAPDYDALDVANKIGII 181
[Close]
BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|225718482|gb|ACO15087.1| (60S ribosomal protein L23a [Caligus clemensi])

HSP 1 Score: 262.307 bits (669), Expect = 6.678e-87
Identity = 135/183 (73.77%), Postives = 155/183 (84.70%), Query Frame = 0 
Query:    1 MAPKKDVEAP-PKGKKPVPKKTAEKKAED--KEAKPAKKAPVRSVQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            M P+K  E      KKPVPKK          K A P KKAPV++VQKA+K+QKKVVKGTHGTRVKKVRT+VHFKRP+T+RP R PK+PRK+  +RNRMDA+NIIKHPLTTESAMKKIEDNNTLVFI N++ANK+QIK++VKKLY+I+VAKVNTLIRPDGQKKAYV+LA DYDALDVANKIGII
Sbjct:    1 MGPRKQPEGGKDTSKKPVPKKVGAPAGATVPKAAVPVKKAPVKAVQKARKIQKKVVKGTHGTRVKKVRTTVHFKRPRTYRPARDPKYPRKSTAKRNRMDAHNIIKHPLTTESAMKKIEDNNTLVFITNVRANKYQIKSAVKKLYEISVAKVNTLIRPDGQKKAYVKLAPDYDALDVANKIGII 183
[Close]
BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|961376920|gb|ALS05204.1| (60S ribosomal protein L23a [Tortanus dextrilobatus])

HSP 1 Score: 258.455 bits (659), Expect = 1.764e-85
Identity = 132/169 (78.11%), Postives = 145/169 (85.80%), Query Frame = 0 
Query:   12 KGKKPVPKKTAEKKAEDKEAKPAKKAPVRSVQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            K  KP PKK  EKK     A  A+KAP +++ KAQ+VQKKVVKG HGTRVKKVRTSV F RPKTFR  R PK+PRK+ PRRNRMDAY IIKHPLTTESAMKKIEDNNTLVFIC+IKANKHQ +++VKKLYDINV+KVNTL+RPDGQKKAYVRLA DYDALDVANKIGII
Sbjct:   17 KAAKPAPKKVVEKK----PAGDAEKAPAKALTKAQRVQKKVVKGLHGTRVKKVRTSVKFYRPKTFRAPRTPKYPRKSTPRRNRMDAYAIIKHPLTTESAMKKIEDNNTLVFICDIKANKHQARSAVKKLYDINVSKVNTLVRPDGQKKAYVRLAPDYDALDVANKIGII 181
[Close]
BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|559372985|gb|AHB12470.1| (60S Ribosomal Protein L23A [Pantala flavescens])

HSP 1 Score: 246.128 bits (627), Expect = 7.317e-80
Identity = 123/160 (76.88%), Postives = 138/160 (86.25%), Query Frame = 0 
Query:   30 EAKPAKKAPVRS---------VQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            EAKP K AP            VQ+A+K+QKKV+KG HGTRV+K+RTSV F+RPKTFRP RQPK+PRK++PRRNRMDAYNIIK PLTTE+AMKKIEDNNTLVFI + KANKH IKA+VKKLYDI+VAKVNTLIRPDG+KKAYVRLA DYDALDVANKIGII
Sbjct:   77 EAKPKKDAPKTPKSAKTTKAVVQRAKKIQKKVIKGVHGTRVRKIRTSVQFRRPKTFRPPRQPKYPRKSVPRRNRMDAYNIIKFPLTTEAAMKKIEDNNTLVFIVHTKANKHHIKAAVKKLYDIDVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 236
[Close]
BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|225714192|gb|ACO12942.1| (60S ribosomal protein L23a [Lepeophtheirus salmonis] >gi|290462641|gb|ADD24368.1| 60S ribosomal protein L23a [Lepeophtheirus salmonis] >gi|290561152|gb|ADD37978.1| 60S ribosomal protein L23a [Lepeophtheirus salmonis])

HSP 1 Score: 244.202 bits (622), Expect = 9.048e-80
Identity = 130/187 (69.52%), Postives = 149/187 (79.68%), Query Frame = 0 
Query:    1 MAPKKDVEAPPKGKKPVPKKTAEKKAEDKEAKPAKKAPVRSV-------QKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            M P+K  E     KKPVPKK A   A    A    KA            QKA+K+QKKVVKGTHGTRVKKVRT+VHFKRP+T+RP R PK+PRK+  +RNRMDA+NIIKHPLTTESAMKKIEDNNTLVFI N++ANK+QIK++VKKLY+I+V+KVNTLIRPDGQKKAYV+LA DYDALDVANKIGII
Sbjct:    1 MGPRKQPEGKDSAKKPVPKKVAPAAASSGTAAAVPKAAAPVKKAPVKAVQKARKIQKKVVKGTHGTRVKKVRTTVHFKRPRTYRPTRDPKYPRKSTAKRNRMDAHNIIKHPLTTESAMKKIEDNNTLVFITNVRANKYQIKSAVKKLYEISVSKVNTLIRPDGQKKAYVKLAPDYDALDVANKIGII 187
[Close]
BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|225713790|gb|ACO12741.1| (60S ribosomal protein L23a [Lepeophtheirus salmonis])

HSP 1 Score: 241.121 bits (614), Expect = 1.397e-78
Identity = 129/187 (68.98%), Postives = 148/187 (79.14%), Query Frame = 0 
Query:    1 MAPKKDVEAPPKGKKPVPKKTAEKKAEDKEAKPAKKAPVRSV-------QKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            M P+K  E     KKPVPKK A   A    A    KA            QKA+K+QKKVVKGTHGTRVKKVRT+VHFKRP+T+RP R PK+PRK+  +RNRMDA+NIIKHPLTTE AMKKIEDNNTLVFI N++ANK+QIK++VKKLY+I+V+KVNTLIRPDGQKKAYV+LA DYDALDVANKIGII
Sbjct:    1 MGPRKQPEGKDSAKKPVPKKVAPAAASSGTAAAVPKAAAPVKKAPVKAVQKARKIQKKVVKGTHGTRVKKVRTTVHFKRPRTYRPTRDPKYPRKSTAKRNRMDAHNIIKHPLTTEPAMKKIEDNNTLVFITNVRANKYQIKSAVKKLYEISVSKVNTLIRPDGQKKAYVKLAPDYDALDVANKIGII 187
[Close]
BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|961374844|gb|ALS04166.1| (60S ribosomal protein L23a [Acartia pacifica] >gi|961374848|gb|ALS04168.1| 60S ribosomal protein L23a [Acartia pacifica])

HSP 1 Score: 239.965 bits (611), Expect = 3.015e-78
Identity = 117/139 (84.17%), Postives = 128/139 (92.09%), Query Frame = 0 
Query:   42 VQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            V KA K +KKVVKG HGTRVKKVRTSV F RPKTF+P R PK+PRK+ P+RN+MDAY IIKHPLTTESAMKKIEDNNTLVFIC+IKANKHQ++A+VKKLYDINVAKVNTL+RPDGQKKAYVRLA DYDALDVANKIGII
Sbjct:   35 VSKALKTKKKVVKGLHGTRVKKVRTSVKFYRPKTFKPPRNPKYPRKSTPKRNKMDAYAIIKHPLTTESAMKKIEDNNTLVFICDIKANKHQVRAAVKKLYDINVAKVNTLVRPDGQKKAYVRLAPDYDALDVANKIGII 173
[Close]
BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|961374846|gb|ALS04167.1| (60S ribosomal protein L23a [Acartia pacifica])

HSP 1 Score: 238.81 bits (608), Expect = 8.079e-78
Identity = 116/139 (83.45%), Postives = 128/139 (92.09%), Query Frame = 0 
Query:   42 VQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            V KA K +KKVVKG HGTRVKKVRTSV F RPKTF+P R PK+PRK+ P+RN+MDAY II+HPLTTESAMKKIEDNNTLVFIC+IKANKHQ++A+VKKLYDINVAKVNTL+RPDGQKKAYVRLA DYDALDVANKIGII
Sbjct:   35 VSKALKTKKKVVKGLHGTRVKKVRTSVKFYRPKTFKPPRNPKYPRKSTPKRNKMDAYAIIRHPLTTESAMKKIEDNNTLVFICDIKANKHQVRAAVKKLYDINVAKVNTLVRPDGQKKAYVRLAPDYDALDVANKIGII 173
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BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|817068423|ref|XP_012256148.1| (60S ribosomal protein L23a [Athalia rosae])

HSP 1 Score: 239.965 bits (611), Expect = 1.996e-77
Identity = 117/152 (76.97%), Postives = 135/152 (88.82%), Query Frame = 0 
Query:   29 KEAKPAKKAPVRSVQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            K+A    KAP + VQKA K QKK++KG HG+RV+K+RTSVHF RPKTFRP R PK+PRK++P RNRMDA+NIIK+PLTTE+AMKKIEDNNTLVFI + +ANK+ IKASVKKLYDI+VAKVNTLIRPDG+KKAYVRLA DYDALDVANKIGII
Sbjct:   81 KKAPKGGKAPSKPVQKALKAQKKILKGVHGSRVRKIRTSVHFHRPKTFRPPRNPKYPRKSVPNRNRMDAFNIIKYPLTTEAAMKKIEDNNTLVFIVHTRANKYHIKASVKKLYDIDVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 232
The following BLAST results are available for this feature:
BLAST of 60s ribosomal protein l23a vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAG000000068261.007e-7074.64supercontig:LSalAtl2s:LSalAtl2s384:78188:79034:-1 ... [more]
EMLSAG000000049283.664e-3366.67supercontig:LSalAtl2s:LSalAtl2s259:302906:313875:1... [more]
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BLAST of 60s ribosomal protein l23a vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|51338615|sp|P62752.1|RL23A_RAT8.350e-6577.78RecName: Full=60S ribosomal protein L23a >gi|51338... [more]
gi|1350713|sp|P48162.1|R23A1_CAEEL3.570e-5661.22RecName: Full=60S ribosomal protein L23a 1[more]
gi|1350700|sp|P48045.1|RL25_KLULA3.719e-5557.66RecName: Full=60S ribosomal protein L25[more]
gi|132823|sp|P08792.1|RL25_CYBJA8.654e-5459.12RecName: Full=60S ribosomal protein L25[more]
gi|2500306|sp|Q20647.1|R23A2_CAEEL5.001e-5361.87RecName: Full=60S ribosomal protein L23a 2[more]
gi|1710524|sp|P04456.4|RL25_YEAST8.985e-5258.73RecName: Full=60S ribosomal protein L25; AltName: ... [more]
gi|6093882|sp|O74391.1|RL25B_SCHPO1.408e-5157.14RecName: Full=60S ribosomal protein L25-B[more]
gi|2507312|sp|P51997.2|RL25_PUCGR2.200e-5161.90RecName: Full=60S ribosomal protein L25[more]
gi|49036456|sp|Q9AT35.1|RL23A_DAUCA9.045e-5165.94RecName: Full=60S ribosomal protein L23a[more]
gi|3122703|sp|O22644.1|RL23A_FRIAG5.416e-5066.19RecName: Full=60S ribosomal protein L23A[more]

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BLAST of 60s ribosomal protein l23a vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1325282909|ref|XP_023326153.1|7.166e-9081.0760S ribosomal protein L23a-like [Eurytemora affini... [more]
gi|961375772|gb|ALS04630.1|7.218e-8976.2260S ribosomal protein L23a [Pseudodiaptomus poples... [more]
gi|225718482|gb|ACO15087.1|6.678e-8773.7760S ribosomal protein L23a [Caligus clemensi][more]
gi|961376920|gb|ALS05204.1|1.764e-8578.1160S ribosomal protein L23a [Tortanus dextrilobatus... [more]
gi|559372985|gb|AHB12470.1|7.317e-8076.8860S Ribosomal Protein L23A [Pantala flavescens][more]
gi|225714192|gb|ACO12942.1|9.048e-8069.5260S ribosomal protein L23a [Lepeophtheirus salmoni... [more]
gi|225713790|gb|ACO12741.1|1.397e-7868.9860S ribosomal protein L23a [Lepeophtheirus salmoni... [more]
gi|961374844|gb|ALS04166.1|3.015e-7884.1760S ribosomal protein L23a [Acartia pacifica] >gi|... [more]
gi|961374846|gb|ALS04167.1|8.079e-7883.4560S ribosomal protein L23a [Acartia pacifica][more]
gi|817068423|ref|XP_012256148.1|1.996e-7776.9760S ribosomal protein L23a [Athalia rosae][more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold245_size240363supercontigscaffold245_size240363:113591..115346 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold245_size240363-snap-gene-1.26-mRNA-1maker-scaffold245_size240363-snap-gene-1.26-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold245_size240363:113591..115346-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold245_size240363-snap-gene-1.26 ID=maker-scaffold245_size240363-snap-gene-1.26|Name=60s ribosomal protein l23a|organism=Tigriopus kingsejongensis|type=gene|length=1756bp|location=Sequence derived from alignment at scaffold245_size240363:113591..115346- (Tigriopus kingsejongensis)
AATGACCTCACGCAACTTCGCTCTCCCTCTTCCTCTTTTCTATCAACATG
GCACCGAAGAAGGACGTCGAAGGTAAGCGCTGAGCTGTCTAACACTCGAT
CCGGAGCCGGACTCGAGGCATGAACCTGCCCAAAGTGGTCCGCCGACTGG
ATCAGGGTTGGCCCATGCACCCCCCCGACATGGGGGTGGCTCAATGTCTC
CGGTCTGGACTCGCGTCCAGCTCGGAGGCAGCGACCGAGCCATCGGATCC
GGCCAATCCGAATATATCTGAGCCATCCCGACGATTGGGGCGAAGAAGGG
ATCGGCATGACGGCTACGACGGGCATACCTGACCATCTCCGGTTTCTCCG
ATAGCTCCGCCCAAGGGCAAGAAGCCCGTGCCCAAGAAGACCGCCGAGAA
GAAGGCTGAGGACAAGGAGGCCAAACCGGCCAAGAAAGCCCCCGTCCGAT
CGGTGCAGAAGGCCCAGAAGGTCCAGAAGAAGGTGGTCAAGGGCACCCAT
GGCACTCGCGTCAAGAAAGTCCGCACTTCGGTGCACTTCAAGCGACCCAA
GACCTTCCGTCCGGTCCGTCAGCCCAAGTTCCCCCGCAAGGCGATTCCTC
GACGAAATCGGTAAGAATCGCCTCCCAGCGAAGGGCTAGAAACACATTCT
GCCCTTGGAAATCGGGCGATTATGAGGACTGGGGATTTTAGGCTAGATCT
GGTTCCCCGGAAGTGGTTCGTGTACTGCCCACGTTTCCGAAGGGGATAAG
GTAGGGGATGGCGGTCGTGGGCCGAAGGGGTTTCGTAGACTAGCCCTGCG
GCTAGGCTTACTTGAGCGAAGTTGATATACTGTAAGGGCCAGGTTTGGTC
GGGTTGGATGTTCGAACTGTTTGGGCGCACGACCGCCAGCCCCTCCTACC
TTTACCTCCGCAGGATCGTACCCTGATCCCCACGGTTACCTTTTCCGGTC
TTACGAGGCGGCCATGGGTCTTGAACCTAATACCTAGAGCAAAGATGGCC
GACTCTTTACCACGTGGTGTCTTTAACTTCTTGGACTTTGGGATCCAGTG
AAGCCAATCCTGCCTGCTTAGATCACTTGATCCAGGTCGAGACCGCGATG
TGATGGCGGGGGCCGATGGTCTGTCATCCGGGGTGTCTGCACGATGAGGT
GGTATTTTGACCACCGGGATGATCCAGGGCACGTTCCTTAGCAGTGGGTA
TCCATGGAACGCGTTTCTTTTTCAGCATGGATGCTTACAACATCATCAAG
CACCCCCTGACGACTGAGTCGGCGATGAAGAAGATCGAGGACAACAACAC
GTTGGTCTTCATCTGCAACATCAAAGCCAACAAGCACCAAATCAAGGCCT
CGGTCAAGAAGCTGTATGATATCAACGTGGCCAAGGTCAACACCCTCATC
AGGTAACTATTGGCCCGCGACCGGCAACTCAAGACCAATCCTTGACATGA
TGATAAACCTCGGATCCAATTTCTGACCCAATTGATGACACACCGTAGCT
GTTCACACTCTGACGCCATTGGCCATGTTCCACTTGGCTGCCACCCCCTT
GACTGGCTTGGATTAACCACCCCGGTTTTCTTTCTCCTTGCAGGCCCGAT
GGACAGAAGAAGGCTTACGTGCGATTGGCTTCCGACTACGACGCTCTGGA
TGTGGCCAACAAGATCGGAATCATATAAATTCCCCCACAACACGCCTTTC
CCATGTTGCTCAGAGTGATACCTTCCGACTGTTGGAAATAAATTCTGGGA
TAAAAT
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Synonyms
The feature '60s ribosomal protein l23a' has the following synonyms
Synonym
Tk06011
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