probable ribosome biogenesis protein rlp24, maker-scaffold384_size188899-snap-gene-0.24 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of probable ribosome biogenesis protein rlp24 vs. L. salmonis genes
Match: EMLSAG00000005946 (supercontig:LSalAtl2s:LSalAtl2s321:157733:158373:-1 gene:EMLSAG00000005946 transcript:EMLSAT00000005946 description:"maker-LSalAtl2s321-augustus-gene-1.31") HSP 1 Score: 227.254 bits (578), Expect = 2.171e-76 Identity = 128/204 (62.75%), Postives = 158/204 (77.45%), Query Frame = 0 Query: 11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLEDAPLDTSIKISAKKAQRTPKRTRAKIQEIRDTDQEMQE 214 MR++KC+FCGSP YPG G F+RNDCK F FCRSKCHKNFKKKKNPRKAKWTKAFRK +GKEL VDPSFEFE+RR EPVKYDR LW TITA+KR+E IKNKRQAK+I DR+K+++ IQ +D++EVQRD+ALIRSPAAGLKRPAK MD++D E E+ L + S +K + PK T+ ++E+ ++D EM+E Sbjct: 1 MRVEKCYFCGSPRYPGKGILFIRNDCKEFIFCRSKCHKNFKKKKNPRKAKWTKAFRKASGKELGVDPSFEFERRRXEPVKYDRALWENTITAMKRVEEIKNKRQAKYIYDRMKRAKKIQDEKDVKEVQRDMALIRSPAAGLKRPAKEMDIDDTE-----------ENTELGLA---STEKLKIQPKLTKKILEEVVESDHEMEE 190
BLAST of probable ribosome biogenesis protein rlp24 vs. L. salmonis genes
Match: EMLSAG00000003171 (supercontig:LSalAtl2s:LSalAtl2s176:340392:341735:-1 gene:EMLSAG00000003171 transcript:EMLSAT00000003171 description:"augustus_masked-LSalAtl2s176-processed-gene-3.0") HSP 1 Score: 61.6178 bits (148), Expect = 2.284e-12 Identity = 41/123 (33.33%), Postives = 62/123 (50.41%), Query Frame = 0 Query: 11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQD 133 M+ID C + G IYP G VR D KVFKF + HK K+NPRK WT +R+ K + + S +KR ++ R + T ++ I KR K + + ++ +AI+ A+D Sbjct: 1 MKIDLCSYSGYKIYPCRGRTLVRPDGKVFKFLXGRSHKAHLLKRNPRKVTWTVLYRRKHKKGIEEETS---KKRTKRTQRFQRAVVGAT------LQDILAKRNQKPEVRKAQREQAIRAAKD 114
BLAST of probable ribosome biogenesis protein rlp24 vs. SwissProt
Match: gi|52783333|sp|Q9UHA3.1|RLP24_HUMAN (RecName: Full=Probable ribosome biogenesis protein RLP24; AltName: Full=Ribosomal L24 domain-containing protein 1; AltName: Full=Ribosomal protein L24-like) HSP 1 Score: 234.572 bits (597), Expect = 3.740e-78 Identity = 108/169 (63.91%), Postives = 138/169 (81.66%), Query Frame = 0 Query: 11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLEDAP 179 MRI+KC+FC PIYPGHG FVRNDCKVF+FC+SKCHKNFKKK+NPRK +WTKAFRK AGKEL VD SFEFEKRRNEP+KY RELW +TI A+KR+E IK KRQAK I++RLKK++ +QK QDI+EV++++ LIR+P AG K +E++ + ++E ++ +EDAP Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPIKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQKVQDIKEVKQNIHLIRAPLAG-----KGKQLEEKMVQQLQEDVD-MEDAP 163
BLAST of probable ribosome biogenesis protein rlp24 vs. SwissProt
Match: gi|75042578|sp|Q5RF04.1|RLP24_PONAB (RecName: Full=Probable ribosome biogenesis protein RLP24; AltName: Full=Ribosomal L24 domain-containing protein 1; AltName: Full=Ribosomal protein L24-like) HSP 1 Score: 233.417 bits (594), Expect = 1.001e-77 Identity = 107/169 (63.31%), Postives = 138/169 (81.66%), Query Frame = 0 Query: 11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLEDAP 179 MRI+KC+FC PIYPGHG FVRNDCKVF+FC+SKCHKNFKK++NPRK +WTKAFRK AGKEL VD SFEFEKRRNEP+KY RELW +TI A+KR+E IK KRQAK I++RLKK++ +QK QDI+EV++++ LIR+P AG K +E++ + ++E ++ +EDAP Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKRRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPIKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQKVQDIKEVKQNIHLIRAPLAG-----KGKQLEEKMVQQLQEDVD-MEDAP 163
BLAST of probable ribosome biogenesis protein rlp24 vs. SwissProt
Match: gi|52783266|sp|Q6P6G7.1|RLP24_RAT (RecName: Full=Probable ribosome biogenesis protein RLP24; AltName: Full=Ribosomal L24 domain-containing protein 1) HSP 1 Score: 232.646 bits (592), Expect = 1.973e-77 Identity = 108/168 (64.29%), Postives = 137/168 (81.55%), Query Frame = 0 Query: 11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLEDA 178 MRI+KC+FC PIYPGHG FVRNDCKVF+FC+SKCHKNFKKK+NPRK +WTKAFRK AGKEL VD SFEFEKRRNEPVKY RELW +TI A+KR+E IK +RQAK I++RLKK++ +QK QDIREV++++ LIR+P AG K +E++ + ++E ++ +EDA Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPVKYQRELWNKTIDAMKRVEEIKQRRQAKFIMNRLKKNKELQKVQDIREVKQNIHLIRAPLAG-----KGKQLEEKMVQQLQEDVD-MEDA 162
BLAST of probable ribosome biogenesis protein rlp24 vs. SwissProt
Match: gi|108860942|sp|Q3SZ12.1|RLP24_BOVIN (RecName: Full=Probable ribosome biogenesis protein RLP24; AltName: Full=Ribosomal L24 domain-containing protein 1) HSP 1 Score: 231.876 bits (590), Expect = 3.409e-77 Identity = 107/168 (63.69%), Postives = 136/168 (80.95%), Query Frame = 0 Query: 11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLEDA 178 MRI+KC+FC PIYPGHG FVRNDCKVF+FC+SKCHKNFKKK+NPRK +WTKAFRK AGKEL VD SFEFEKRRNEPVKY RELW +TI A+KR+E IK KRQAK I++RLKK++ +QK QD++EV++++ LIR+P AG K +ED+ + ++E ++ +ED Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPVKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQKVQDVKEVKQNIHLIRAPLAG-----KGKQLEDKMVQKLQEDVD-MEDV 162
BLAST of probable ribosome biogenesis protein rlp24 vs. SwissProt
Match: gi|52783322|sp|Q99L28.1|RLP24_MOUSE (RecName: Full=Probable ribosome biogenesis protein RLP24; AltName: Full=Ribosomal L24 domain-containing protein 1; AltName: Full=Ribosomal protein L24-like) HSP 1 Score: 230.72 bits (587), Expect = 1.135e-76 Identity = 106/166 (63.86%), Postives = 134/166 (80.72%), Query Frame = 0 Query: 11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLE 176 MRI+KC+FC PIYPGHG FVRNDCKVF+FC+SKCHKNFKKK+NPRK +WTKAFRK AGKEL VD SFEFEKRRNEPVKY RELW +TI A+KR+E IK KRQAK I++RLKK++ +QK QDI+EV++++ LIR+P AG K +E++ + ++E ++ E Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPVKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQKVQDIKEVKQNIHLIRAPLAG-----KGKQLEEKMVQQLQEDVDMEE 161
BLAST of probable ribosome biogenesis protein rlp24 vs. SwissProt
Match: gi|52783306|sp|Q7ZTZ2.1|RLP24_DANRE (RecName: Full=Probable ribosome biogenesis protein RLP24; AltName: Full=Ribosomal L24 domain-containing protein 1) HSP 1 Score: 224.172 bits (570), Expect = 4.500e-74 Identity = 100/166 (60.24%), Postives = 136/166 (81.93%), Query Frame = 0 Query: 11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLE 176 MRI+KC+FC +P+YPGHG FVRNDCKVF+FCRSKCHKNFKKK+NPRK +WTKAFRK+AGKEL VD S EFEKRRN PVKY+RELW++T+ A++++E+IK+KRQA+ I++RLKK + ++KA DI EV++++ LI++P AG +A +ED+ + + E +E E Sbjct: 1 MRIEKCYFCSAPVYPGHGMMFVRNDCKVFRFCRSKCHKNFKKKRNPRKTRWTKAFRKSAGKELTVDNSLEFEKRRNTPVKYNRELWSKTVEAMRKVESIKHKRQARFIMNRLKKGKELEKAADISEVKKNIHLIKAPHAG-----QAKQLEDKMVQKLAEDVEMDE 161
BLAST of probable ribosome biogenesis protein rlp24 vs. SwissProt
Match: gi|52783334|sp|Q9VGN9.1|RLP24_DROME (RecName: Full=Probable ribosome biogenesis protein RLP24) HSP 1 Score: 212.616 bits (540), Expect = 4.393e-69 Identity = 92/142 (64.79%), Postives = 114/142 (80.28%), Query Frame = 0 Query: 11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLK 152 MRI C+FC S IYPGHG FVRNDCKVFKFCR KCHK FK+KKNPRK WTKA+RK AGKELA+DPSFEFEKRRN P+KY RE W + + A+KR+ IK KR + +++RL+K R ++ D+++VQR+++LIRSPAAGLK Sbjct: 1 MRIQTCYFCSSKIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPRKVGWTKAYRKAAGKELAIDPSFEFEKRRNVPMKYSRETWQKGLEAIKRVTEIKEKRTSHFVMERLRKGRQVEIQMDVKDVQRNMSLIRSPAAGLK 142
BLAST of probable ribosome biogenesis protein rlp24 vs. SwissProt
Match: gi|52783309|sp|Q86B05.1|RLP24_DICDI (RecName: Full=Probable ribosome biogenesis protein RLP24) HSP 1 Score: 189.119 bits (479), Expect = 2.617e-60 Identity = 87/164 (53.05%), Postives = 115/164 (70.12%), Query Frame = 0 Query: 11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIET 174 MRI+KC+FC P+YPGHG FVRNDCK F+FCRSKCHKNFK K+NPRK +WTKAFRK GKE+ VD + EFEK+RN PVKYDREL TI A+ R++ IK +R+ +R++ + +QK Q ++E+ ++L+LIR P+A K + AE IE+ T Sbjct: 1 MRIEKCYFCSGPVYPGHGVMFVRNDCKQFRFCRSKCHKNFKLKRNPRKTRWTKAFRKLNGKEMTVDKTLEFEKKRNRPVKYDRELINNTIIAMARVQKIKERREKTFYKNRMEGVKGMQKKQKLKEINQNLSLIRGPSA----LNKLQERIKNNAEKIEQLTTT 160
BLAST of probable ribosome biogenesis protein rlp24 vs. SwissProt
Match: gi|52783280|sp|O22165.1|RLP24_ARATH (RecName: Full=Probable ribosome biogenesis protein RLP24) HSP 1 Score: 171.785 bits (434), Expect = 1.754e-53 Identity = 74/139 (53.24%), Postives = 105/139 (75.54%), Query Frame = 0 Query: 11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAA 149 MR++KC+FC S IYPGHG FVRND K+F+FCRSKCHKNFK K+NPRK KWTKAFR GK++ D +FEFEK+RN P +YDR + T+ A+K+I I+ R+AKHI +RLK ++ + D++E+ +++ ++++P A Sbjct: 1 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAFRAAHGKDMTKDTTFEFEKKRNRPERYDRNVTENTLMAIKKIAKIRTAREAKHIENRLKPNKQKKLNDDMKELDQNIHMVQAPGA 139
BLAST of probable ribosome biogenesis protein rlp24 vs. SwissProt
Match: gi|52783287|sp|Q6CNW3.1|RLP24_KLULA (RecName: Full=Ribosome biogenesis protein RLP24) HSP 1 Score: 160.999 bits (406), Expect = 8.876e-49 Identity = 84/171 (49.12%), Postives = 107/171 (62.57%), Query Frame = 0 Query: 11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLEDAPLD 181 MR+ C FC SP YPGHG FVRND K F+FCRSKCHK FK+++NPRK +WTKAFRK AGKELAVD + F +RRN PV+Y+REL T+ A+ RIE I+ +R+ +R+ K + R+ RD AL+ S L + +VE A EEAIE D +D Sbjct: 1 MRVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRKAAGKELAVDSTLTFAQRRNVPVRYNRELVATTLKAMSRIEEIRQRRERAFYKNRM-------KGNNERDFLRDKALVESNPELL----RLREVELARQAAKEEAIEQASDEEMD 160
BLAST of probable ribosome biogenesis protein rlp24 vs. nr
Match: gi|225714612|gb|ACO13152.1| (Probable ribosome biogenesis protein RLP24 [Lepeophtheirus salmonis]) HSP 1 Score: 242.662 bits (618), Expect = 1.646e-78 Identity = 126/204 (61.76%), Postives = 159/204 (77.94%), Query Frame = 0 Query: 11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLEDAPLDTSIKISAKKAQRTPKRTRAKIQEIRDTDQEMQE 214 MR++KC+FCGSP YPG G F+RNDCK F FCRS+CHKNFKKKKNPRKAKWTKAFRK +GKEL VDPSFEFE+RRNEPVKYDR LW TITA+KR+E IK+KRQAK+I DR+K+++ IQ +D++EVQRD+ALIRSPAAGLKRPAK MD++D E E+ L + S ++ + PK T+ ++E+ ++D EM+E Sbjct: 1 MRVEKCYFCGSPRYPGKGILFIRNDCKEFIFCRSECHKNFKKKKNPRKAKWTKAFRKASGKELGVDPSFEFERRRNEPVKYDRALWENTITAMKRVEEIKDKRQAKYIYDRMKRAKKIQDEKDVKEVQRDMALIRSPAAGLKRPAKEMDIDDTE-----------ENTELGLA---STEELKVQPKLTKKILEEVVESDHEMEE 190
BLAST of probable ribosome biogenesis protein rlp24 vs. nr
Match: gi|1325277376|ref|XP_023323328.1| (probable ribosome biogenesis protein RLP24 [Eurytemora affinis]) HSP 1 Score: 242.276 bits (617), Expect = 2.117e-78 Identity = 128/205 (62.44%), Postives = 158/205 (77.07%), Query Frame = 0 Query: 11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLEDAPLDTSIKISAKKAQRTPKRTRAKIQEIRDTDQEMQEN 215 MRI++C+FCGS +YPG GT FVRNDCK+F+FCRSKCH+ FKKKKNPRKAKWTKAFRK+AGKELAVDPSFEFEKRRN PVKYDRELW TITA++R+E IKNKRQ+ I R+K ++ IQKA+DI+EV+RDLALI+SPAAGLKR K ++ ED E +D+SI + +K + R AKI+EI ++D+EM N Sbjct: 1 MRIERCYFCGSSVYPGKGTTFVRNDCKIFRFCRSKCHRAFKKKKNPRKAKWTKAFRKSAGKELAVDPSFEFEKRRNIPVKYDRELWNNTITAMQRVEVIKNKRQSHFIFQRMKLAKKIQKAKDIKEVERDLALIKSPAAGLKRANKELEEEDMELA-----------GEIDSSINLVPQKVR---AREEAKIEEIHESDEEMAAN 191
BLAST of probable ribosome biogenesis protein rlp24 vs. nr
Match: gi|530605181|ref|XP_005294320.1| (probable ribosome biogenesis protein RLP24 [Chrysemys picta bellii]) HSP 1 Score: 236.884 bits (603), Expect = 1.343e-76 Identity = 108/168 (64.29%), Postives = 139/168 (82.74%), Query Frame = 0 Query: 11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLEDA 178 MRI+KC+FC PIYPGHG FVRNDCKVF+FCRSKCHKNFKKK+NPRK +WTKAFRK AGKEL VD SFEFEKRRNEP+KY RELW++T+ A+KR+E IK KRQAK I++RLKKS+ +QKAQDI+EV++++ L+R+P AG KA +E++ + ++EA+ E++ Sbjct: 1 MRIEKCYFCSGPIYPGHGLMFVRNDCKVFRFCRSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPLKYQRELWSKTVDAMKRVEEIKQKRQAKFIMNRLKKSKELQKAQDIKEVKQNIHLVRAPHAG-----KAKRLEEKMVQKLQEAVAMEEES 163
BLAST of probable ribosome biogenesis protein rlp24 vs. nr
Match: gi|1351538922|ref|XP_024053857.1| (probable ribosome biogenesis protein RLP24 [Terrapene mexicana triunguis]) HSP 1 Score: 236.113 bits (601), Expect = 2.246e-76 Identity = 107/168 (63.69%), Postives = 139/168 (82.74%), Query Frame = 0 Query: 11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLEDA 178 MRI+KC+FC P+YPGHG FVRNDCKVF+FCRSKCHKNFKKK+NPRK +WTKAFRK AGKEL VD SFEFEKRRNEP+KY RELW++T+ A+KR+E IK KRQAK I++RLKKS+ +QKAQDI+EV++++ L+R+P AG KA +E++ + ++EA+ E++ Sbjct: 1 MRIEKCYFCSGPVYPGHGLMFVRNDCKVFRFCRSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPLKYQRELWSKTVDAMKRVEEIKQKRQAKFIMNRLKKSKELQKAQDIKEVKQNIHLVRAPHAG-----KAKRLEEKMVQKLQEAVAMEEES 163
BLAST of probable ribosome biogenesis protein rlp24 vs. nr
Match: gi|1117266575|ref|XP_019359788.1| (PREDICTED: probable ribosome biogenesis protein RLP24 [Gavialis gangeticus]) HSP 1 Score: 235.728 bits (600), Expect = 3.924e-76 Identity = 106/168 (63.10%), Postives = 137/168 (81.55%), Query Frame = 0 Query: 11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLEDA 178 MR+++C+FC P+YPGHG FVRNDCKVF+FC+SKCHKNFKKK+NPRK +WTKAFRK AGKEL VD SFEFEKRRNEPVKY RELW++T+ A+KR+E IK KRQAK I++RLKKS+ +QK QDI+EV++++ L+R+P AG KA +ED+ + ++E + EDA Sbjct: 1 MRVERCYFCSGPVYPGHGVMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPVKYQRELWSKTVDAMKRVEEIKQKRQAKFIMNRLKKSKELQKVQDIKEVKQNIHLLRAPHAG-----KAKQLEDKMVQKLQEEVAMEEDA 163
BLAST of probable ribosome biogenesis protein rlp24 vs. nr
Match: gi|355692731|gb|EHH27334.1| (Ribosomal L24 domain-containing protein 1 [Macaca mulatta]) HSP 1 Score: 234.958 bits (598), Expect = 7.163e-76 Identity = 108/169 (63.91%), Postives = 138/169 (81.66%), Query Frame = 0 Query: 11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLEDAP 179 MRI+KC+FC PIYPGHG FVRNDCKVF+FC+SKCHKNFKKK+NPRK +WTKAFRK AGKEL VD SFEFEKRRNEP+KY RELW +TI A+KR+E IK KRQAK I++RLKK++ +QK QDI+EV++++ LIR+P AG K +E++ + ++E ++ +EDAP Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPIKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQKVQDIKEVKQNIHLIRAPLAG-----KGKQLEEKMVQQLQEEVD-MEDAP 163
BLAST of probable ribosome biogenesis protein rlp24 vs. nr
Match: gi|426379145|ref|XP_004056264.1| (PREDICTED: probable ribosome biogenesis protein RLP24 [Gorilla gorilla gorilla]) HSP 1 Score: 234.958 bits (598), Expect = 7.402e-76 Identity = 109/169 (64.50%), Postives = 138/169 (81.66%), Query Frame = 0 Query: 11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLEDAP 179 MRI+KC+FC PIYPGHG FVRNDCKVF+FC+SKCHKNFKKK+NPRK +WTKAFRK AGKEL VD SFEFEKRRNEPVKY RELW +TI A+KR+E IK KRQAK I++RLKK++ +QK QDI+EV++++ LIR+P AG K +E++ + ++E ++ +EDAP Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPVKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQKVQDIKEVKQNIHLIRAPLAG-----KGKQLEEKMVQQLQEDVD-MEDAP 163
BLAST of probable ribosome biogenesis protein rlp24 vs. nr
Match: gi|1050387373|gb|OCT89566.1| (hypothetical protein XELAEV_18018189mg [Xenopus laevis]) HSP 1 Score: 234.958 bits (598), Expect = 8.533e-76 Identity = 106/168 (63.10%), Postives = 138/168 (82.14%), Query Frame = 0 Query: 11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLEDA 178 MR++KC+FC +PIYPGHG FVRNDCK F+FCRSKCHKNFKKK+NPRK +WTKAFRK+AGKEL VD SFEFEKRRNEPVKY R+LW++T+ A+KR+E IK KRQA+ I++RLKK + +QKAQDI+EV++++ LIR+P AG KA +ED+ + ++E ++ E A Sbjct: 1 MRVEKCYFCSAPIYPGHGMMFVRNDCKAFRFCRSKCHKNFKKKRNPRKLRWTKAFRKSAGKELTVDNSFEFEKRRNEPVKYQRQLWSKTVEAMKRVEEIKQKRQARFIMNRLKKGKELQKAQDIKEVKQNIHLIRAPHAG-----KAKQMEDKMVQKLQEDVDMEESA 163
BLAST of probable ribosome biogenesis protein rlp24 vs. nr
Match: gi|1211411122|ref|XP_021493642.1| (probable ribosome biogenesis protein RLP24 [Meriones unguiculatus]) HSP 1 Score: 234.572 bits (597), Expect = 9.837e-76 Identity = 109/168 (64.88%), Postives = 138/168 (82.14%), Query Frame = 0 Query: 11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLEDA 178 MRI+KC+FC PIYPGHG FVRNDCKVF+FC+SKCHKNFKKK+NPRK +WTKAFRK AGKEL VD SFEFEKRRNEPVKY RELW +TI A+KR+E IK KRQAK I++RLKK++ +QKAQD+REV++++ LIR+P AG K +E++ + ++E ++ +EDA Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPVKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQKAQDVREVKQNIHLIRAPLAG-----KGKQLEEKMVQQLQEDVD-MEDA 162
BLAST of probable ribosome biogenesis protein rlp24 vs. nr
Match: gi|10047102|ref|NP_057388.1| (probable ribosome biogenesis protein RLP24 [Homo sapiens] >gi|384475689|ref|NP_001244991.1| probable ribosome biogenesis protein RLP24 [Macaca mulatta] >gi|545688096|ref|NP_001271088.1| probable ribosome biogenesis protein RLP24 [Macaca fascicularis] >gi|55642163|ref|XP_510425.1| probable ribosome biogenesis protein RLP24 [Pan troglodytes] >gi|397515326|ref|XP_003827904.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Pan paniscus] >gi|402874374|ref|XP_003901014.1| probable ribosome biogenesis protein RLP24 [Papio anubis] >gi|795074265|ref|XP_011841891.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Mandrillus leucophaeus] >gi|795285574|ref|XP_011753505.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Macaca nemestrina] >gi|795349319|ref|XP_011784037.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Colobus angolensis palliatus] >gi|795427926|ref|XP_011948445.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Cercocebus atys] >gi|52783333|sp|Q9UHA3.1|RLP24_HUMAN RecName: Full=Probable ribosome biogenesis protein RLP24; AltName: Full=Ribosomal L24 domain-containing protein 1; AltName: Full=Ribosomal protein L24-like >gi|6563296|gb|AAF17241.1|AF201949_1 60S ribosomal protein L30 isolog [Homo sapiens] >gi|9294749|gb|AAF86651.1|AF165521_1 ribosomal protein L30 isolog [Homo sapiens] >gi|12001990|gb|AAG43138.1|AF060926_1 My024 protein [Homo sapiens] >gi|13445484|gb|AAK26249.1|AF212226_1 RPL24 [Homo sapiens] >gi|14250026|gb|AAH08409.1| Ribosomal L24 domain containing 1 [Homo sapiens] >gi|14250046|gb|AAH08422.1| Ribosomal L24 domain containing 1 [Homo sapiens] >gi|14250085|gb|AAH08449.1| Ribosomal L24 domain containing 1 [Homo sapiens] >gi|15277730|gb|AAH12913.1| Ribosomal L24 domain containing 1 [Homo sapiens] >gi|16307032|gb|AAH09593.1| Ribosomal L24 domain containing 1 [Homo sapiens] >gi|16307055|gb|AAH09604.1| Ribosomal L24 domain containing 1 [Homo sapiens] >gi|16740951|gb|AAH16331.1| Ribosomal L24 domain containing 1 [Homo sapiens] >gi|16876889|gb|AAH16725.1| Ribosomal L24 domain containing 1 [Homo sapiens] >gi|16877008|gb|AAH16777.1| Ribosomal L24 domain containing 1 [Homo sapiens] >gi|20070779|gb|AAH26267.1| Ribosomal L24 domain containing 1 [Homo sapiens] >gi|20072219|gb|AAH26266.1| Ribosomal L24 domain containing 1 [Homo sapiens] >gi|23273900|gb|AAH35995.1| Ribosomal L24 domain containing 1 [Homo sapiens] >gi|48146475|emb|CAG33460.1| C15orf15 [Homo sapiens] >gi|62531055|gb|AAH93067.1| Ribosomal L24 domain containing 1 [Homo sapiens] >gi|90078182|dbj|BAE88771.1| unnamed protein product [Macaca fascicularis] >gi|119597879|gb|EAW77473.1| chromosome 15 open reading frame 15, isoform CRA_a [Homo sapiens] >gi|119597881|gb|EAW77475.1| chromosome 15 open reading frame 15, isoform CRA_a [Homo sapiens] >gi|189067881|dbj|BAG37819.1| unnamed protein product [Homo sapiens] >gi|208966012|dbj|BAG73020.1| chromosome 15 open reading frame 15, partial [synthetic construct] >gi|355778059|gb|EHH63095.1| Ribosomal L24 domain-containing protein 1 [Macaca fascicularis] >gi|649153748|gb|AIC63407.1| RSL24D1, partial [synthetic construct] >gi|649153751|gb|AIC63408.1| RSL24D1, partial [synthetic construct] >gi|1331815348|gb|PNI74760.1| RSL24D1 isoform 1 [Pan troglodytes]) HSP 1 Score: 234.572 bits (597), Expect = 1.159e-75 Identity = 108/169 (63.91%), Postives = 138/169 (81.66%), Query Frame = 0 Query: 11 MRIDKCFFCGSPIYPGHGTHFVRNDCKVFKFCRSKCHKNFKKKKNPRKAKWTKAFRKNAGKELAVDPSFEFEKRRNEPVKYDRELWTQTITAVKRIETIKNKRQAKHILDRLKKSRAIQKAQDIREVQRDLALIRSPAAGLKRPAKAMDVEDEEAEAIEEAIETLEDAP 179 MRI+KC+FC PIYPGHG FVRNDCKVF+FC+SKCHKNFKKK+NPRK +WTKAFRK AGKEL VD SFEFEKRRNEP+KY RELW +TI A+KR+E IK KRQAK I++RLKK++ +QK QDI+EV++++ LIR+P AG K +E++ + ++E ++ +EDAP Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPIKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQKVQDIKEVKQNIHLIRAPLAG-----KGKQLEEKMVQQLQEDVD-MEDAP 163 The following BLAST results are available for this feature:
BLAST of probable ribosome biogenesis protein rlp24 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of probable ribosome biogenesis protein rlp24 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of probable ribosome biogenesis protein rlp24 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold384_size188899:123253..125831+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold384_size188899-snap-gene-0.24 ID=maker-scaffold384_size188899-snap-gene-0.24|Name=probable ribosome biogenesis protein rlp24|organism=Tigriopus kingsejongensis|type=gene|length=2579bp|location=Sequence derived from alignment at scaffold384_size188899:123253..125831+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'probable ribosome biogenesis protein rlp24' has the following synonyms
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