aael007792- partial, maker-scaffold407_size180809-snap-gene-0.27 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of aael007792- partial vs. L. salmonis genes
Match: EMLSAG00000006660 (supercontig:LSalAtl2s:LSalAtl2s36:1141764:1143133:-1 gene:EMLSAG00000006660 transcript:EMLSAT00000006660 description:"maker-LSalAtl2s36-augustus-gene-11.8") HSP 1 Score: 50.0618 bits (118), Expect = 7.407e-7 Identity = 36/138 (26.09%), Postives = 62/138 (44.93%), Query Frame = 0
Query: 84 VDMITDIATASTHFVFDDVGWGSLTLTFVFIPGFVCAVAISLRGLK-QEFTWKRCLNYLILTLLLPFLYPIIQVMVNAYMVYLMIIRRSREIFRIMGHDVKQFKSLEGFLESGPQFVLQSYILLRGEKKGNFSDVEEK 220
+D TDI T + D GWG L L VF+P + + LRG + C ++ +P ++ Y +Y +I+ + + + ++G +SGPQ +LQ+ I+LRG +F++V K
Sbjct: 18 LDTTTDICTGVELILNDHHGWGGLVLFCVFLPTLLSVIGEVLRGCAYSGXCGEACTDW------IPLIF---------YHLYSVIMMAGSQWQPRWKKEGDYLRWIQGLTQSGPQLLLQTVIVLRGVLIHSFAEVMHK 140
BLAST of aael007792- partial vs. nr
Match: gi|1325284891|ref|XP_023327153.1| (uncharacterized protein LOC111700468 isoform X4 [Eurytemora affinis]) HSP 1 Score: 196.823 bits (499), Expect = 3.358e-56 Identity = 113/243 (46.50%), Postives = 152/243 (62.55%), Query Frame = 0
Query: 178 MGHDVKQFKSLEGFLESGPQFVLQSYILLRGEKKG---NFSDVEE---KRIFTLTLSILLSFISLAKTGYNVNVPDEDSNRTARQTKDNSKYFPLTSILFHATCVLFRVTSLAYFFATIRFYTILLIVTNMGANYGILIWNGASQTISILLGAVSVFMPNGYLLYNFAATFPVDFPFAGTRRFLLFHMIIASGTFFACIFGILIGGATDSYWLDANVPDASVLSDFYVQLGINILLLALGVLS 414
MGHD+KQFKSLEGFLESGP F LQ+YIL+ G KKG ++ +V+E +R+ L+ SIL SF+SL KT +VNVPD D RT Q K ++KYF LT +LF+ TC+L+RV +++F +R Y IL+IVT N ++ S TISI+LGA+S+F+PNGYLLYNFA T VD GT+ I + + I G+ I T L+ + D F + G+NI+L LG+LS
Sbjct: 1 MGHDLKQFKSLEGFLESGPSFCLQTYILMVGHKKGTNIDWDNVKEDDIERLLLLSCSILFSFLSLVKTSCSVNVPDPDPRRTKPQYKKSAKYFVLTLVLFNLTCILYRVIGISFFCVYLRQYIILIIVTGFLCNLCTWLYMSRSPTISIILGAISIFVPNGYLLYNFAGTLVVDLSRRGTKVVFFVSTIGPNIIWAGGIVGVAIYTGTSGLTLEHIISDHDTHLKFVI--GMNIVLGILGLLS 241
BLAST of aael007792- partial vs. nr
Match: gi|1325284889|ref|XP_023327152.1| (uncharacterized protein LOC111700468 isoform X3 [Eurytemora affinis]) HSP 1 Score: 197.593 bits (501), Expect = 3.928e-56 Identity = 113/243 (46.50%), Postives = 152/243 (62.55%), Query Frame = 0
Query: 178 MGHDVKQFKSLEGFLESGPQFVLQSYILLRGEKKG---NFSDVEE---KRIFTLTLSILLSFISLAKTGYNVNVPDEDSNRTARQTKDNSKYFPLTSILFHATCVLFRVTSLAYFFATIRFYTILLIVTNMGANYGILIWNGASQTISILLGAVSVFMPNGYLLYNFAATFPVDFPFAGTRRFLLFHMIIASGTFFACIFGILIGGATDSYWLDANVPDASVLSDFYVQLGINILLLALGVLS 414
MGHD+KQFKSLEGFLESGP F LQ+YIL+ G KKG ++ +V+E +R+ L+ SIL SF+SL KT +VNVPD D RT Q K ++KYF LT +LF+ TC+L+RV +++F +R Y IL+IVT N ++ S TISI+LGA+S+F+PNGYLLYNFA T VD GT+ I + + I G+ I T L+ + D F + G+NI+L LG+LS
Sbjct: 1 MGHDLKQFKSLEGFLESGPSFCLQTYILMVGHKKGTNIDWDNVKEDDIERLLLLSCSILFSFLSLVKTSCSVNVPDPDPRRTKPQYKKSAKYFVLTLVLFNLTCILYRVIGISFFCVYLRQYIILIIVTGFLCNLCTWLYMSRSPTISIILGAISIFVPNGYLLYNFAGTLVVDLSRRGTKVVFFVSTIGPNIIWAGGIVGVAIYTGTSGLTLEHIISDHDTHLKFVI--GMNIVLGILGLLS 241
BLAST of aael007792- partial vs. nr
Match: gi|1325284887|ref|XP_023327150.1| (uncharacterized protein LOC111700468 isoform X2 [Eurytemora affinis]) HSP 1 Score: 197.208 bits (500), Expect = 8.242e-56 Identity = 113/243 (46.50%), Postives = 152/243 (62.55%), Query Frame = 0
Query: 178 MGHDVKQFKSLEGFLESGPQFVLQSYILLRGEKKG---NFSDVEE---KRIFTLTLSILLSFISLAKTGYNVNVPDEDSNRTARQTKDNSKYFPLTSILFHATCVLFRVTSLAYFFATIRFYTILLIVTNMGANYGILIWNGASQTISILLGAVSVFMPNGYLLYNFAATFPVDFPFAGTRRFLLFHMIIASGTFFACIFGILIGGATDSYWLDANVPDASVLSDFYVQLGINILLLALGVLS 414
MGHD+KQFKSLEGFLESGP F LQ+YIL+ G KKG ++ +V+E +R+ L+ SIL SF+SL KT +VNVPD D RT Q K ++KYF LT +LF+ TC+L+RV +++F +R Y IL+IVT N ++ S TISI+LGA+S+F+PNGYLLYNFA T VD GT+ I + + I G+ I T L+ + D F + G+NI+L LG+LS
Sbjct: 1 MGHDLKQFKSLEGFLESGPSFCLQTYILMVGHKKGTNIDWDNVKEDDIERLLLLSCSILFSFLSLVKTSCSVNVPDPDPRRTKPQYKKSAKYFVLTLVLFNLTCILYRVIGISFFCVYLRQYIILIIVTGFLCNLCTWLYMSRSPTISIILGAISIFVPNGYLLYNFAGTLVVDLSRRGTKVVFFVSTIGPNIIWAGGIVGVAIYTGTSGLTLEHIISDHDTHLKFVI--GMNIVLGILGLLS 241
BLAST of aael007792- partial vs. nr
Match: gi|1325284885|ref|XP_023327149.1| (uncharacterized protein LOC111700468 isoform X1 [Eurytemora affinis]) HSP 1 Score: 197.208 bits (500), Expect = 7.281e-55 Identity = 113/243 (46.50%), Postives = 152/243 (62.55%), Query Frame = 0
Query: 178 MGHDVKQFKSLEGFLESGPQFVLQSYILLRGEKKG---NFSDVEE---KRIFTLTLSILLSFISLAKTGYNVNVPDEDSNRTARQTKDNSKYFPLTSILFHATCVLFRVTSLAYFFATIRFYTILLIVTNMGANYGILIWNGASQTISILLGAVSVFMPNGYLLYNFAATFPVDFPFAGTRRFLLFHMIIASGTFFACIFGILIGGATDSYWLDANVPDASVLSDFYVQLGINILLLALGVLS 414
MGHD+KQFKSLEGFLESGP F LQ+YIL+ G KKG ++ +V+E +R+ L+ SIL SF+SL KT +VNVPD D RT Q K ++KYF LT +LF+ TC+L+RV +++F +R Y IL+IVT N ++ S TISI+LGA+S+F+PNGYLLYNFA T VD GT+ I + + I G+ I T L+ + D F + G+NI+L LG+LS
Sbjct: 1 MGHDLKQFKSLEGFLESGPSFCLQTYILMVGHKKGTNIDWDNVKEDDIERLLLLSCSILFSFLSLVKTSCSVNVPDPDPRRTKPQYKKSAKYFVLTLVLFNLTCILYRVIGISFFCVYLRQYIILIIVTGFLCNLCTWLYMSRSPTISIILGAISIFVPNGYLLYNFAGTLVVDLSRRGTKVVFFVSTIGPNIIWAGGIVGVAIYTGTSGLTLEHIISDHDTHLKFVI--GMNIVLGILGLLS 241 The following BLAST results are available for this feature:
BLAST of aael007792- partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of aael007792- partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of aael007792- partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 4
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold407_size180809:38953..43393+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold407_size180809-snap-gene-0.27 ID=maker-scaffold407_size180809-snap-gene-0.27|Name=aael007792- partial|organism=Tigriopus kingsejongensis|type=gene|length=4441bp|location=Sequence derived from alignment at scaffold407_size180809:38953..43393+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'aael007792- partial' has the following synonyms
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