estrogen related nuclear partial, maker-scaffold421_size176100-snap-gene-0.27 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000008071 (supercontig:LSalAtl2s:LSalAtl2s47:304551:317770:1 gene:EMLSAG00000008071 transcript:EMLSAT00000008071 description:"snap_masked-LSalAtl2s47-processed-gene-3.10") HSP 1 Score: 249.98 bits (637), Expect = 3.037e-82 Identity = 119/154 (77.27%), Postives = 132/154 (85.71%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIE-SPYGGLHPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGD+ASGFHYGVSSCEACKAFFKRTIQGNIEYT PASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIE SPY + P K +LE+NKLL L CEPE L D LP+ + +T++TLS+F++REL+GTI WAK Sbjct: 272 LVCGDIASGFHYGVSSCEACKAFFKRTIQGNIEYTXPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESSPY--IQPPPKKTLEDNKLLQVLRHCEPEAFLVNMDMTLPNYKIRTISTLSDFYNRELIGTIEWAK 423
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000008902 (supercontig:LSalAtl2s:LSalAtl2s554:572309:581835:1 gene:EMLSAG00000008902 transcript:EMLSAT00000008902 description:"maker-LSalAtl2s554-snap-gene-5.6") HSP 1 Score: 112.079 bits (279), Expect = 6.669e-30 Identity = 54/107 (50.47%), Postives = 68/107 (63.55%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGLHPARKLSLEENKLLI 108 VCGD SG+HYG+ +CE+CK FFKRT+Q YTC A C I+K +RK C CRFQKCL +GM E VR DR+RGGR K+ M + ARKL + + +I Sbjct: 188 VCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVADRSCVIDKTQRKRCPYCRFQKCLDVGMKLEAVRHDRMRGGRNKFGPMYKRDR-----ARKLQVLRQRQVI 289
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000008543 (supercontig:LSalAtl2s:LSalAtl2s527:163002:172818:1 gene:EMLSAG00000008543 transcript:EMLSAT00000008543 description:"maker-LSalAtl2s527-augustus-gene-1.53") HSP 1 Score: 109.383 bits (272), Expect = 9.294e-29 Identity = 46/79 (58.23%), Postives = 56/79 (70.89%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGR 79 ++C D A+G HYG+ +CE CK FFKRT+Q YTC A ECEINK +R CQ CRFQKCL+ GM+ VR DR+ GGR Sbjct: 284 MICEDRATGLHYGIITCEGCKGFFKRTVQNKRIYTCVADGECEINKAQRNRCQYCRFQKCLQKGMVLAAVREDRMPGGR 362
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000004451 (supercontig:LSalAtl2s:LSalAtl2s231:945915:949068:1 gene:EMLSAG00000004451 transcript:EMLSAT00000004451 description:"snap_masked-LSalAtl2s231-processed-gene-9.18") HSP 1 Score: 106.301 bits (264), Expect = 7.633e-28 Identity = 47/92 (51.09%), Postives = 57/92 (61.96%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGL 93 VCGD SGFHYG+ SCE+CK FFKRT+Q Y C ++C + RK C ACRF KCL +GM E +R DR RGGR Y+ P G+ Sbjct: 157 VCGDKISGFHYGIFSCESCKGFFKRTVQNKKNYVCLRGSQCPVTISTRKKCPACRFDKCLNIGMKLEAIREDRTRGGRSTYQCSYNLPTTGV 248
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000013004 (supercontig:LSalAtl2s:LSalAtl2s98:942409:953748:1 gene:EMLSAG00000013004 transcript:EMLSAT00000013004 description:"augustus_masked-LSalAtl2s98-processed-gene-9.1") HSP 1 Score: 102.449 bits (254), Expect = 2.269e-26 Identity = 46/78 (58.97%), Postives = 56/78 (71.79%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGR 79 VCGD A+ HYGV +CE CK FFKRT+Q N +Y C A C ++KRRR CQ CRFQKCL +GM+KE VR D ++G R Sbjct: 411 VCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRR 488
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000001919 (supercontig:LSalAtl2s:LSalAtl2s132:616435:622808:1 gene:EMLSAG00000001919 transcript:EMLSAT00000001919 description:"augustus_masked-LSalAtl2s132-processed-gene-6.5") HSP 1 Score: 92.4337 bits (228), Expect = 5.272e-23 Identity = 41/76 (53.95%), Postives = 53/76 (69.74%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRG 77 +CGD ASG HYGV SCE CK FFKRT++ + Y C + +C I+KR+R CQ CR+ KCL GM +E V+ +R RG Sbjct: 93 ICGDRASGKHYGVYSCEGCKGFFKRTVRKELTYACRENRDCVIDKRQRNRCQYCRYMKCLDTGMKREAVQEERHRG 168
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000012486 (supercontig:LSalAtl2s:LSalAtl2s91:348479:353390:-1 gene:EMLSAG00000012486 transcript:EMLSAT00000012486 description:"maker-LSalAtl2s91-snap-gene-4.8") HSP 1 Score: 91.6633 bits (226), Expect = 1.454e-22 Identity = 37/65 (56.92%), Postives = 44/65 (67.69%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGM 65 +VCGD ASG HYG SCE CK FFKR+I+ + Y C + +CE+ K R CQ CR QKCL MGM Sbjct: 221 VVCGDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGM 285
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000009941 (supercontig:LSalAtl2s:LSalAtl2s649:484085:485655:-1 gene:EMLSAG00000009941 transcript:EMLSAT00000009941 description:"maker-LSalAtl2s649-snap-gene-4.11") HSP 1 Score: 90.5077 bits (223), Expect = 1.607e-22 Identity = 50/155 (32.26%), Postives = 75/155 (48.39%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRM--IESPYGGLHPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 +VCGD +SG HYG +CE CK+FFKR+++ N+ Y C S C +++ R CQ CR +KC +MGM +E V+ RV Q + P G + + + L R EP P +P + + + EF R L + W + Sbjct: 84 VVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYQCRGSKNCPVDQHHRNQCQHCRLKKCFKMGMRREAVQRGRVPPTPQGVFGLGFSSDPLSG-------TTYLSSYISMLLRAEPYPTSRYGQMPMPTNGMIGIENICEFAARLLFSAVEWTR 231
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000009969 (supercontig:LSalAtl2s:LSalAtl2s651:302705:304416:-1 gene:EMLSAG00000009969 transcript:EMLSAT00000009969 description:"maker-LSalAtl2s651-augustus-gene-2.5") HSP 1 Score: 87.8113 bits (216), Expect = 2.790e-21 Identity = 35/74 (47.30%), Postives = 50/74 (67.57%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDR 74 +VCGD +SG HYG +CE CK+FFKR ++ ++ + C + C +++ R CQ CRF+KCL MGM KE V+ R Sbjct: 76 VVCGDKSSGKHYGQFTCEGCKSFFKRCVRRSLTFQCRSKKSCPVDQHHRNQCQHCRFKKCLNMGMKKEAVQKGR 149
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000009940 (supercontig:LSalAtl2s:LSalAtl2s649:353131:422335:-1 gene:EMLSAG00000009940 transcript:EMLSAT00000009940 description:"maker-LSalAtl2s649-augustus-gene-4.7") HSP 1 Score: 87.4261 bits (215), Expect = 4.279e-21 Identity = 37/81 (45.68%), Postives = 53/81 (65.43%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQK 81 +VCGD +SG HYG +CE CK+FFKR+++ + Y C S C I++ R CQ CR +KC++MGM KE V+ R+ +Q Sbjct: 435 VVCGDKSSGKHYGQFTCEGCKSFFKRSVRRALTYQCRGSRSCPIDQHHRNQCQHCRLKKCIKMGMRKEAVQRGRIPASQQN 515
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|55584164|sp|P49884.3|ESR1_BOVIN (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1) HSP 1 Score: 140.584 bits (353), Expect = 1.715e-38 Identity = 77/177 (43.50%), Postives = 102/177 (57.63%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQ-KYRRMIES--------PYGGLHPAR----------------KLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 VC D ASG+HYGV SCE CKAFFKR+IQG+ +Y CPA+N+C I+K RRK+CQACR +KC +GM+K G+R DR RGGR K++R + P G + A LSL ++++ AL EP + + DP P + + L+ DRELV I WAK Sbjct: 188 VCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDR-RGGRMLKHKRQRDDGEGRNEAVPSGDMRAANLWPSPIMIKHTKKNSPVLSLTADQMISALLEAEPPIIYSEYDPTRPFSEASMMGLLTNLADRELVHMINWAK 363
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|2500908|sp|Q29040.1|ESR1_PIG (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1) HSP 1 Score: 139.813 bits (351), Expect = 3.091e-38 Identity = 77/177 (43.50%), Postives = 102/177 (57.63%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQ-KYRRMIES--------PYGGLHPAR----------------KLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 VC D ASG+HYGV SCE CKAFFKR+IQG+ +Y CPA+N+C I+K RRK+CQACR +KC +GM+K G+R DR RGGR K++R + P G + A LSL ++++ AL EP + + DP P + + L+ DRELV I WAK Sbjct: 187 VCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDR-RGGRMLKHKRQRDDGEGRNEAVPPGDMRSANLWPSPLLIKHTKKNSPVLSLTADQMISALLEAEPPIIYSEYDPTRPLSEASMMGLLTNLADRELVHMINWAK 362
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|119599|sp|P19785.1|ESR1_MOUSE (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1) HSP 1 Score: 139.813 bits (351), Expect = 3.318e-38 Identity = 77/177 (43.50%), Postives = 103/177 (58.19%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQ-KYRR---------------------MIESPYGGLHPARK---LSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 VC D ASG+HYGV SCE CKAFFKR+IQG+ +Y CPA+N+C I+K RRK+CQACR +KC +GM+K G+R DR RGGR K++R + SP H + LSL ++++ AL EP + + DP+ P + + L+ DRELV I WAK Sbjct: 191 VCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDR-RGGRMLKHKRQRDDLEGRNEMGASGDMRAANLWPSPLVIKHTKKNSPALSLTADQMVSALLDAEPPMIYSEYDPSRPFSEASMMGLLTNLADRELVHMINWAK 366
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|12230055|sp|Q9QZJ5.1|ESR1_MESAU (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1) HSP 1 Score: 139.428 bits (350), Expect = 3.455e-38 Identity = 77/177 (43.50%), Postives = 103/177 (58.19%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQ-KYRR---------------------MIESPYGGLHPARK---LSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 VC D ASG+HYGV SCE CKAFFKR+IQG+ +Y CPA+N+C I+K RRK+CQACR +KC +GM+K G+R DR RGGR K++R + SP H + LSL ++++ AL EP + + DP+ P + + L+ DRELV I WAK Sbjct: 187 VCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDR-RGGRMLKHKRQRDDLEGRNDMGPSGDMRATNLWPSPLVIKHTKKNSPALSLTADQMVSALLDAEPPLIYSEYDPSRPFSEASMMGLLTNLADRELVHMINWAK 362
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|75069755|sp|Q53AD2.1|ESR1_FELCA (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1) HSP 1 Score: 139.428 bits (350), Expect = 3.981e-38 Identity = 77/177 (43.50%), Postives = 103/177 (58.19%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQ-KYRR---------------------MIESPYGGLHPARK---LSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 VC D ASG+HYGV SCE CKAFFKR+IQG+ +Y CPA+N+C I+K RRK+CQACR +KC +GM+K G+R DR RGGR K++R + SP H + LSL ++++ AL EP + + DP+ P + + L+ DRELV I WAK Sbjct: 187 VCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDR-RGGRMLKHKRQRDEGEGRNEVGSSGDVRASNLWPSPLLIKHTKKNSPALSLTADQMVSALLEAEPPIIYSDYDPSRPFSEASMMGLLTNLADRELVHMINWAK 362
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|544257|sp|P03372.2|ESR1_HUMAN (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1) HSP 1 Score: 139.428 bits (350), Expect = 4.273e-38 Identity = 78/177 (44.07%), Postives = 102/177 (57.63%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQ-KYRRMIESPYG-------------GLHP-----------ARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 VC D ASG+HYGV SCE CKAFFKR+IQG+ +Y CPA+N+C I+K RRK+CQACR +KC +GM+K G+R DR RGGR K++R + G L P + LSL ++++ AL EP L + DP P + + L+ DRELV I WAK Sbjct: 187 VCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDR-RGGRMLKHKRQRDDGEGRGEVGSAGDMRAANLWPSPLMIKRSKKNSLALSLTADQMVSALLDAEPPILYSEYDPTRPFSEASMMGLLTNLADRELVHMINWAK 362
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|119600|sp|P06211.1|ESR1_RAT (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1) HSP 1 Score: 139.043 bits (349), Expect = 4.809e-38 Identity = 77/177 (43.50%), Postives = 103/177 (58.19%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQ-KYRR---------------------MIESPYGGLHPARK---LSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 VC D ASG+HYGV SCE CKAFFKR+IQG+ +Y CPA+N+C I+K RRK+CQACR +KC +GM+K G+R DR RGGR K++R + SP H + LSL ++++ AL EP + + DP+ P + + L+ DRELV I WAK Sbjct: 192 VCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDR-RGGRMLKHKRQRDDLEGRNEMGTSGDMRAANLWPSPLVIKHTKKNSPALSLTADQMVSALLDAEPPLIYSEYDPSRPFSEASMMGLLTNLADRELVHMINWAK 367
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|12230056|sp|Q9TV98.1|ESR1_HORSE (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1) HSP 1 Score: 138.658 bits (348), Expect = 7.103e-38 Identity = 78/177 (44.07%), Postives = 101/177 (57.06%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQ-KYRRMIES--------PYGGLHPAR----------------KLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 VC D ASG+HYGV SCE CKAFFKR+IQG+ +Y CPA+N+C I+K RRK+CQACR +KC +GM+K G+R DR RGGR K++R + P G PA LSL +++ AL EP L + D P ++ + L+ DRELV I WAK Sbjct: 187 VCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDR-RGGRMLKHKRQRDDGEGRNEAGPSGDRRPANFWPSPLLIKHTKKISPVLSLTAEQMISALLDAEPPVLYSEYDATRPFNEASMMGLLTNLADRELVHMINWAK 362
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|6015120|sp|P81559.1|ESR1_XENLA (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1) HSP 1 Score: 137.887 bits (346), Expect = 1.189e-37 Identity = 77/174 (44.25%), Postives = 102/174 (58.62%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGR-QKYRRM--------------IESPYGGLHPARK-------LSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 VC D ASG+HYGV SCE CKAFFKR+IQG+ +Y CPA+N+C I+K RRK+CQACR +KC +GM+K G+R DR RGGR K++R I + ++P+ K LSL +L+ AL E + + D P + +T L+ DRELV I WAK Sbjct: 182 VCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDR-RGGRLLKHKRQKEEQEQKNDVDPSEIRTASIWVNPSVKSMKLSPVLSLTAEQLISALMEAEAPIVYSEHDSTKPLSEASMMTLLTNLADRELVHMINWAK 354
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|6166156|sp|Q62986.2|ESR2_RAT (RecName: Full=Estrogen receptor beta; Short=ER-beta; AltName: Full=Nuclear receptor subfamily 3 group A member 2) HSP 1 Score: 133.265 bits (334), Expect = 3.711e-36 Identity = 69/165 (41.82%), Postives = 100/165 (60.61%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVR--------LDRVRGGRQKYRRMIESPYGGLHPARK-----LSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 VC D ASG+HYGV SCE CKAFFKR+IQG+ +Y CPA+N+C I+K RRK+CQACR +KC +GM+K G R + R R ++ + ++ G H R +L +L++ L EP P + + P++P + + +L++ D+ELV IGWAK Sbjct: 151 VCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRIVRRQRSSSEQVHCLSKAKRNGGHAPRVKELLLSTLSPEQLVLTLLEAEP-PNVLVSRPSMPFTEASMMMSLTKLADKELVHMIGWAK 314
BLAST of estrogen related nuclear partial vs. nr
Match: gi|657600382|gb|AID52852.1| (estrogen related receptor [Tigriopus japonicus]) HSP 1 Score: 321.242 bits (822), Expect = 2.829e-106 Identity = 150/153 (98.04%), Postives = 153/153 (100.00%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGLHPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPAS++CEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGLHPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEF+DRELVGTIGWAK Sbjct: 176 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASSDCEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGLHPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFYDRELVGTIGWAK 328
BLAST of estrogen related nuclear partial vs. nr
Match: gi|657600384|gb|AID52853.1| (estrogen related receptor [Tigriopus japonicus]) HSP 1 Score: 322.013 bits (824), Expect = 4.121e-106 Identity = 150/153 (98.04%), Postives = 153/153 (100.00%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGLHPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPAS++CEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGLHPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEF+DRELVGTIGWAK Sbjct: 206 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASSDCEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGLHPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFYDRELVGTIGWAK 358
BLAST of estrogen related nuclear partial vs. nr
Match: gi|597711674|gb|AHN16691.1| (putative estrogen related nuclear receptor, partial [Calanus finmarchicus]) HSP 1 Score: 250.751 bits (639), Expect = 3.834e-82 Identity = 115/154 (74.68%), Postives = 137/154 (88.96%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRM-IESPYGGLHPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNI+YTCP +N CEINKRRRKACQACR+QKCLR GMLKEGVRLDRVRGGRQKY+R +E+ +G + +RK++LEENK+L +L++CEPE L++L DP+LP KT++TLS+ +DRELVGTIGWAK Sbjct: 3 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIDYTCPVANSCEINKRRRKACQACRYQKCLRQGMLKEGVRLDRVRGGRQKYKRYPMETTHGSVQTSRKITLEENKVLESLSQCEPEQLVSLADPSLPSSALKTVSTLSDIYDRELVGTIGWAK 156
BLAST of estrogen related nuclear partial vs. nr
Match: gi|675378132|gb|KFM71034.1| (Estrogen-related receptor gamma, partial [Stegodyphus mimosarum]) HSP 1 Score: 254.603 bits (649), Expect = 1.719e-80 Identity = 120/155 (77.42%), Postives = 135/155 (87.10%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGLHPA--RKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGD+ASG+HYGV+SCEACKAFFKRTIQGNIEYTCPASN+CEINKRRRKACQACRFQKCL+MGMLKEGVRLDRVRGGRQKYRR ESPY +HP +K SLEENK++ AL CEPEPL A +P LP+ +KT++TLS+ DRELV TIGWAK Sbjct: 137 LVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYTCPASNDCEINKRRRKACQACRFQKCLKMGMLKEGVRLDRVRGGRQKYRRCQESPY-QVHPVPCKKPSLEENKIIAALVMCEPEPLQAQANPALPESHFKTISTLSDLVDRELVATIGWAK 290
BLAST of estrogen related nuclear partial vs. nr
Match: gi|1355987727|gb|PRD31115.1| (Estrogen-related receptor gamma [Nephila clavipes]) HSP 1 Score: 249.21 bits (635), Expect = 1.961e-80 Identity = 117/155 (75.48%), Postives = 135/155 (87.10%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGLH--PARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGD ASG+HYGV+SCEACKAFFKRTIQGNIEYTCPA+N+CEINKRRRKACQACRFQKCL+MGMLKEGVRLDRVRGGRQKYRR ESPY +H P +K S+E+NK++ AL CEP+PL ALP+P LP+ + K ++TLS+ DRELV TIGWAK Sbjct: 143 LVCGDTASGYHYGVASCEACKAFFKRTIQGNIEYTCPANNDCEINKRRRKACQACRFQKCLKMGMLKEGVRLDRVRGGRQKYRRSQESPY-QVHSAPCKKPSIEDNKIITALLNCEPDPLQALPNPALPESELKIVSTLSDLVDRELVSTIGWAK 296
BLAST of estrogen related nuclear partial vs. nr
Match: gi|1009592767|ref|XP_015925326.1| (estrogen-related receptor gamma isoform X2 [Parasteatoda tepidariorum]) HSP 1 Score: 252.292 bits (643), Expect = 9.886e-80 Identity = 120/155 (77.42%), Postives = 135/155 (87.10%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGLHPA--RKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASG+HYGV+SCEACKAFFKRTIQGNIEYTCPASN+CEINKRRRKACQACRFQKCL+MGMLKEGVRLDRVRGGRQKYRR ESPY +H +K SLE+NK++ AL CEPEPL A P+P LP+ +KT++TLS+ DRELV TIGWAK Sbjct: 126 LVCGDVASGYHYGVASCEACKAFFKRTIQGNIEYTCPASNDCEINKRRRKACQACRFQKCLKMGMLKEGVRLDRVRGGRQKYRRCQESPY-QVHAITCKKPSLEDNKIISALLNCEPEPLQAQPNPALPESHFKTVSTLSDLVDRELVATIGWAK 279
BLAST of estrogen related nuclear partial vs. nr
Match: gi|1009592765|ref|XP_015925325.1| (estrogen-related receptor gamma isoform X1 [Parasteatoda tepidariorum]) HSP 1 Score: 252.292 bits (643), Expect = 1.093e-79 Identity = 120/155 (77.42%), Postives = 135/155 (87.10%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGLHPA--RKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASG+HYGV+SCEACKAFFKRTIQGNIEYTCPASN+CEINKRRRKACQACRFQKCL+MGMLKEGVRLDRVRGGRQKYRR ESPY +H +K SLE+NK++ AL CEPEPL A P+P LP+ +KT++TLS+ DRELV TIGWAK Sbjct: 135 LVCGDVASGYHYGVASCEACKAFFKRTIQGNIEYTCPASNDCEINKRRRKACQACRFQKCLKMGMLKEGVRLDRVRGGRQKYRRCQESPY-QVHAITCKKPSLEDNKIISALLNCEPEPLQAQPNPALPESHFKTVSTLSDLVDRELVATIGWAK 288
BLAST of estrogen related nuclear partial vs. nr
Match: gi|1089676203|gb|AOY10609.1| (estrogen-related receptor [Macrobrachium rosenbergii]) HSP 1 Score: 244.973 bits (624), Expect = 6.435e-77 Identity = 114/155 (73.55%), Postives = 133/155 (85.81%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGLH--PARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCG++ASGFHYGV+SCEACKAFFKRTIQGNIEYTCPA+N+CEINKRRRKACQACRF KCLR+GMLKEGVRLDRVRGGRQKYRR +SP+ +H P +K SLE+ KLL +L C PE LLA+PDP + D Y T++TL++ +DRELV TIGWAK Sbjct: 128 LVCGNIASGFHYGVASCEACKAFFKRTIQGNIEYTCPAANDCEINKRRRKACQACRFHKCLRVGMLKEGVRLDRVRGGRQKYRRTSDSPF-SMHQMPVKKASLEDIKLLASLRACVPESLLAMPDPTVSDTDYLTISTLADLYDRELVSTIGWAK 281
BLAST of estrogen related nuclear partial vs. nr
Match: gi|259906648|gb|ACW84414.1| (estrogen receptor-like protein [Teleogryllus emma]) HSP 1 Score: 242.276 bits (617), Expect = 1.270e-76 Identity = 116/155 (74.84%), Postives = 131/155 (84.52%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPY--GGLHPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASGFHYGV+SCEACKAFFKRTIQGNIEYTCPA+N+CEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRR + PY P LSL+ENK+L ALT CEP+ LLA PD ++ D + + ++TLS+ +DRELVG I WAK Sbjct: 72 LVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPAANDCEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRNPDLPYQVQAFMPRPVLSLDENKMLKALTSCEPDLLLASPDTSIVDLELRVVSTLSDLYDRELVGVISWAK 226
BLAST of estrogen related nuclear partial vs. nr
Match: gi|694998544|gb|AIS76179.1| (estrogen-related receptor protein [Portunus trituberculatus]) HSP 1 Score: 243.047 bits (619), Expect = 1.463e-76 Identity = 112/154 (72.73%), Postives = 130/154 (84.42%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGLH-PARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGD+ASGFHYGV+SCEACKAFFKRTIQGNIEYTCPA+N+CEINKRRRKACQACRF KCL +GMLKEGVRLDRVRGGRQKYRR ESP+ P +K+SLE+NKLL +L CEP+ L AL D + D + T++TL++ +DRELV TIGWAK Sbjct: 99 LVCGDIASGFHYGVASCEACKAFFKRTIQGNIEYTCPAANDCEINKRRRKACQACRFHKCLHVGMLKEGVRLDRVRGGRQKYRRTTESPFSLQQMPVKKVSLEDNKLLKSLISCEPDSLYALSDVTVSDADFHTISTLADLYDRELVSTIGWAK 252 The following BLAST results are available for this feature:
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of estrogen related nuclear partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of estrogen related nuclear partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold421_size176100:2..6526- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold421_size176100-snap-gene-0.27 ID=maker-scaffold421_size176100-snap-gene-0.27|Name=estrogen related nuclear partial|organism=Tigriopus kingsejongensis|type=gene|length=6525bp|location=Sequence derived from alignment at scaffold421_size176100:2..6526- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'estrogen related nuclear partial' has the following synonyms
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