orphan nuclear receptor, maker-scaffold491_size156641-snap-gene-0.24 (gene) Tigriopus kingsejongensis

Overview
Nameorphan nuclear receptor
Unique Namemaker-scaffold491_size156641-snap-gene-0.24
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000008543 (supercontig:LSalAtl2s:LSalAtl2s527:163002:172818:1 gene:EMLSAG00000008543 transcript:EMLSAT00000008543 description:"maker-LSalAtl2s527-augustus-gene-1.53")

HSP 1 Score: 423.32 bits (1087), Expect = 2.697e-139
Identity = 210/281 (74.73%), Postives = 232/281 (82.56%), Query Frame = 0
Query:  318 NILRAALTGNSQISTQYKHLFVNRDAEKNSFD--------HMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590
            NILRAALTG+  I  QY+ L      +K  +D          +LIN LI+CDDFEDIATLKNIGELLNQNT+DLQQKLCQIGDSIVYKLVQWTRRLPFY +LPVDVHTKLLTHKWHELLVL  SAYQAIHGS RMGT RTDGEK ELHQEV+TNLVTLQTCLTSMMGKPI+MDQL QDVGNMVEKIT+VIA+FRQ +L MEEYVCLKVIAMV   D  + SL  I++RYL CL+A+  ++ P EP RV  LLVRLPEV+VAA+LLLESKMFYVPFLLNSSI
Sbjct:  512 NILRAALTGSPDIPRQYRGL-SKGPLDKRLYDPSYSPPDESSKLINELIICDDFEDIATLKNIGELLNQNTADLQQKLCQIGDSIVYKLVQWTRRLPFYRDLPVDVHTKLLTHKWHELLVLXXSAYQAIHGSKRMGTTRTDGEKVELHQEVATNLVTLQTCLTSMMGKPISMDQLWQDVGNMVEKITKVIAIFRQFRLTMEEYVCLKVIAMVSQEDLKATSLASIHDRYLNCLKAFTRKNFPREPHRVHDLLVRLPEVQVAASLLLESKMFYVPFLLNSSI 791          

HSP 2 Score: 227.254 bits (578), Expect = 3.160e-65
Identity = 114/187 (60.96%), Postives = 126/187 (67.38%), Query Frame = 0
Query:  156 INMEKLWDGDRTQL------------------------------PANAKKLTEG-------TTQEGDDH----IEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNK--NKSSGKTG 299
            +NMEKLW GDR+QL                              P +   +          +   GD++      ++SL+CMICED+ATGLHYGIITCEGCKGFFKRTVQNKRIY CVADG CEINKAQRNRCQYCRFQKCL KGMVLAAVREDRMPGGRNSGAVYNMYKVKYKK+K  N SSG TG
Sbjct:  203 MNMEKLWAGDRSQLLDKMGPPPSSSTPSFLEMDNKGGLHIXSSXPTSXANINSNNPPPIHQSGGPGDNNNPSSQPQQSLVCMICEDRATGLHYGIITCEGCKGFFKRTVQNKRIYTCVADGECEINKAQRNRCQYCRFQKCLQKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKHKRANSSSGGTG 389          
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000004451 (supercontig:LSalAtl2s:LSalAtl2s231:945915:949068:1 gene:EMLSAG00000004451 transcript:EMLSAT00000004451 description:"snap_masked-LSalAtl2s231-processed-gene-9.18")

HSP 1 Score: 150.599 bits (379), Expect = 1.718e-39
Identity = 116/389 (29.82%), Postives = 186/389 (47.81%), Query Frame = 0
Query:  195 CMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDA-------EKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENS----DSTSPSLV----PIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVR 568
            C +C DK +G HYGI +CE CKGFFKRTVQNK+ Y C+    C +  + R +C  CRF KCL+ GM L A+REDR  GGR++      Y+  Y          T G  ST  T         I  ++    G+   +T+ K   VN+ +       E  S +H+   +  +      + ++  +  +   ++ S+  Q L  + D  +YKLV+W + LP +  + VD    LL + W ELLV +   Y+++      G IR       L Q+ S NL + ++     +G           V   +EK+       R+ K+   EYV LKVI ++ ++    D+T    V        + ++ L++Y   H+P  P++  +LL+R+PE++
Sbjct:  155 CPVCGDKISGFHYGIFSCESCKGFFKRTVQNKKNYVCLRGSQCPVTISTRKKCPACRFDKCLNIGMKLEAIREDRTRGGRST------YQCSYNL-------PTTGVCSTNST--------TIPTIKRESRGDDH-NTETK---VNQSSGIPVLLHEIMSVEHLWFWSTSMPSLSLNNSSSNTDTSQ---ESPSNPVQTLTLLADKRLYKLVRWCKSLPLFKNILVDDQITLLINAWCELLVFSC-CYKSVDSP---GFIR-------LSQDKSLNLESAKS-----LG-----------VNECIEKMLNFSDQLRRLKVDHYEYVSLKVILLLTSAPLYVDATGLKEVDQVRESQEQVVQALQSYTNFHYPSMPNKFGELLLRMPELQ 488          
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000008902 (supercontig:LSalAtl2s:LSalAtl2s554:572309:581835:1 gene:EMLSAG00000008902 transcript:EMLSAT00000008902 description:"maker-LSalAtl2s554-snap-gene-5.6")

HSP 1 Score: 135.576 bits (340), Expect = 3.753e-34
Identity = 61/96 (63.54%), Postives = 71/96 (73.96%), Query Frame = 0
Query:  186 DHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNS-GAVY 280
            D +EE   +C +C DK +G HYG++TCE CKGFFKRTVQNK++Y CVAD  C I+K QR RC YCRFQKCL  GM L AVR DRM GGRN  G +Y
Sbjct:  180 DGMEE---LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVADRSCVIDKTQRKRCPYCRFQKCLDVGMKLEAVRHDRMRGGRNKFGPMY 272          
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000009969 (supercontig:LSalAtl2s:LSalAtl2s651:302705:304416:-1 gene:EMLSAG00000009969 transcript:EMLSAT00000009969 description:"maker-LSalAtl2s651-augustus-gene-2.5")

HSP 1 Score: 133.65 bits (335), Expect = 8.686e-34
Identity = 101/417 (24.22%), Postives = 171/417 (41.01%), Query Frame = 0
Query:  172 NAKKLTEGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLI--NNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTS-AYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDS--TSPSLVPIYNRYLKC-LRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYV 582
            N+  LT  +   G +   E  ++C++C DK++G HYG  TCEGCK FFKR V+    + C +   C +++  RN+CQ+CRF+KCL+ GM   AV++ R      S  ++N     +  N                                  TG+S +ST    L        + +  +Q+   NN+I  D+                        +C+    +++  ++W R +P + EL +     LL   W EL VL  S  +  +H +  +             + V+                   MD +R       E++ ++ AL    ++   E  CLK I +        T  +L+       +C L  Y   HHP +P R  KLL+RLP +R  ++ ++E ++F++
Sbjct:   54 NSSSLTAPSPSSGTNSSTE--ILCVVCGDKSSGKHYGQFTCEGCKSFFKRCVRRSLTFQCRSKKSCPVDQHHRNQCQHCRFKKCLNMGMKKEAVQKGRT--TTTSAPIFNYSNDLFSPN----------------------------------TGSSYLSTYISLLLRAEPYTTSQYGQLQMAASNNIIGIDN------------------------ICEFAARLLFSAIEWARNIPGFPELQITDQVGLLRMVWSELFVLNASQCHMPLHVAPLLVAXGLHASPLAADRXVA------------------FMDHIRV----FQEQVEKLKAL----QVDAAEXACLKAIVLFSTDPPGLTDITLIEQLQEKSQCALDDYCKIHHPTKPSRFGKLLLRLPSLRTVSSAVIE-QLFFI 381          
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000013004 (supercontig:LSalAtl2s:LSalAtl2s98:942409:953748:1 gene:EMLSAG00000013004 transcript:EMLSAT00000013004 description:"augustus_masked-LSalAtl2s98-processed-gene-9.1")

HSP 1 Score: 115.161 bits (287), Expect = 5.106e-27
Identity = 49/83 (59.04%), Postives = 59/83 (71.08%), Query Frame = 0
Query:  192 SLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGR 274
            SL+C +C D A   HYG+ TCEGCKGFFKRTVQ    Y C+AD +C ++K +RNRCQ+CRFQKCL  GMV   VR D + G R
Sbjct:  406 SLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRR 488          
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000008071 (supercontig:LSalAtl2s:LSalAtl2s47:304551:317770:1 gene:EMLSAG00000008071 transcript:EMLSAT00000008071 description:"snap_masked-LSalAtl2s47-processed-gene-3.10")

HSP 1 Score: 112.849 bits (281), Expect = 1.169e-26
Identity = 78/249 (31.33%), Postives = 113/249 (45.38%), Query Frame = 0
Query:  186 DHIEEES---LICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLT 431
            D I+EE      C++C D A+G HYG+ +CE CK FFKRT+Q    Y   A   CEINK +R  CQ CRFQKCL  GM+   VR DR+ GGR           KY++                E+  +  P       +  L  N       K L V R  E  +F    L+N  +   +++ I T+  + +  N+           IG       ++W +++P +  L ++   KLL   W E+LVL+
Sbjct:  259 DIIKEEEGQRRTCLVCGDIASGFHYGVSSCEACKAFFKRTIQGNIEYTXPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQ----------KYRR--------------MIESSPYIQPPP-----KKTLEDN-------KLLQVLRHCEPEAF----LVNMDMTLPNYK-IRTISTLSDFYNREL---------IG------TIEWAKQIPGFSNLTINDQMKLLQSSWSEILVLS 451          
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000001919 (supercontig:LSalAtl2s:LSalAtl2s132:616435:622808:1 gene:EMLSAG00000001919 transcript:EMLSAT00000001919 description:"augustus_masked-LSalAtl2s132-processed-gene-6.5")

HSP 1 Score: 105.531 bits (262), Expect = 1.649e-24
Identity = 45/79 (56.96%), Postives = 56/79 (70.89%), Query Frame = 0
Query:  194 ICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPG 272
             C IC D+A+G HYG+ +CEGCKGFFKRTV+ +  Y C  +  C I+K QRNRCQYCR+ KCL  GM   AV+E+R  G
Sbjct:   90 FCSICGDRASGKHYGVYSCEGCKGFFKRTVRKELTYACRENRDCVIDKRQRNRCQYCRYMKCLDTGMKREAVQEERHRG 168          
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000012486 (supercontig:LSalAtl2s:LSalAtl2s91:348479:353390:-1 gene:EMLSAG00000012486 transcript:EMLSAT00000012486 description:"maker-LSalAtl2s91-snap-gene-4.8")

HSP 1 Score: 104.375 bits (259), Expect = 1.295e-23
Identity = 76/309 (24.60%), Postives = 129/309 (41.75%), Query Frame = 0
Query:  195 CMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVL-------------AAVREDRMP---------------------GGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAAL-------------TGNSQISTQYKHL---FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKL--------------------CQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTS 433
            C++C D+A+G HYG I+CEGCKGFFKR+++ +  Y C  +  CE+ K  RNRCQYCR QKCL  GM +             +AV+ +R P                       +NS  VY++Y      ++N S G +   I +  +H  ++   +  +L +               T    ++  Y HL    V    EK+       +    +C+D E+          ++++ + +Q  L                    C+    +++  V W R +P + +L  +    L+ + W ++ VL  S
Sbjct:  220 CVVCGDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRIMKQIYESYLAPRVSAVQSERRPIVPANVSNAVTAALAENISISNAKNSSPVYHIYDSPTLLSRN-SLGPSSDSILS--SHDTNVKAASTIVLGSGGIGSGGIGDEDNTSTDAGSLNGDYSHLDASHVLAAREKSLISXAMDVMTKTICEDEEEEPNEDINNSSIDESETIIQDSLVNFKLSTPSPTPFYLNVHFICETASRLLFLSVHWVRTIPCFGQLSYESQVGLVRNSWSDIFVLGMS 525          
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000009941 (supercontig:LSalAtl2s:LSalAtl2s649:484085:485655:-1 gene:EMLSAG00000009941 transcript:EMLSAT00000009941 description:"maker-LSalAtl2s649-snap-gene-4.11")

HSP 1 Score: 99.7525 bits (247), Expect = 6.332e-23
Identity = 66/260 (25.38%), Postives = 103/260 (39.62%), Query Frame = 0
Query:  170 PANAKKLTEGTTQEGDDHIEEESLI-CMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELL 428
            PA +  +           + E S I C++C DK++G HYG  TCEGCK FFKR+V+    Y C    +C +++  RN+CQ+CR +KC   GM   AV+  R+P                        G  G   S+                   L+G + +S+    L        + +  M +  N ++         ++NI               C+    +++  V+WTR +P + EL V     LL   W EL 
Sbjct:   57 PAISSGIVASIEHAKPSELSESSDINCVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYQCRGSKNCPVDQHHRNQCQHCRLKKCFKMGMRREAVQRGRVP--------------------PTPQGVFGLGFSSD-----------------PLSGTTYLSSYISMLLRAEPYPTSRYGQMPMPTNGMI--------GIENI---------------CEFAARLLFSAVEWTRSIPGFPELQVTDQVALLRLVWSELF 256          
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000007361 (supercontig:LSalAtl2s:LSalAtl2s418:374353:376789:1 gene:EMLSAG00000007361 transcript:EMLSAT00000007361 description:"maker-LSalAtl2s418-augustus-gene-3.13")

HSP 1 Score: 98.9821 bits (245), Expect = 4.804e-22
Identity = 67/252 (26.59%), Postives = 115/252 (45.63%), Query Frame = 0
Query:  195 CMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLL-THKWHELLVLTTSAYQAIHGSTRMG 445
            C +C D+ATG HYG  +C+GCKGFF+R+V+ +R+Y C  +  C +NK +RN C+YCR + C+  GM  +AV+ +R              ++  +K  +     +  E++       D   Q  ++L + + GN  I+T       N   E+N   + QL             A++++IG  + +                +  LV+W + +  + EL VD   +LL  H    LL+        ++G   +G
Sbjct:  151 CAVCGDRATGKHYGAASCDGCKGFFRRSVRKERVYGCRQNRACIVNKDKRNNCRYCRLKMCIKAGMKKSAVQNER-------------DRISCRKKTSAKDMNSANELTVTALLNADKVGQK-SLLNSIVGGN--INTN------NFITEENVLANKQL-------------ASIEDIGHSMKEQ---------------LIVLVEWAKHIKAFCELSVDDQVRLLRAHSGEHLLMGVAKRSMNLNGILLLG 352          
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|75025546|sp|Q9U2R6.2|NHR91_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-91)

HSP 1 Score: 248.825 bits (634), Expect = 1.335e-74
Identity = 150/408 (36.76%), Postives = 222/408 (54.41%), Query Frame = 0
Query:  192 SLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKN--IGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQ-AIHGSTRMGTIRTDGEKAEL-HQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVE-NSDSTSPSLV-----PIYNRYLKCLRAYATQHHPLEPDRVDKL---LVRLPEVRVAAALLLESKMFYVPFLL 586
            S +C +C DK+TGLHYG  TCEGCKGFFKR+VQNK++Y+C  D  CEI+K  RNRCQ CRF+KC+ KGM+  AVREDRMPGGRN  ++Y+ YK                              Q  +I+R        +  Q +  F +  + K      +LI  L+  D  + +  LK   I    N + +   ++L +IGD IV +LV+WT+ LPF+ ELPV+ HT LLT +W EL++L+   Y  ++       T     E  E+       NL  LQ  L+ ++GK I ++ + ++ G +V + T ++  F   K+  E YVC+K I ++  ++DST    +      + + ++K L+ +   H P E  +   L   L  LP++R A+++LL SKMFYVPFLL
Sbjct:   97 SKLCSVCGDKSTGLHYGAATCEGCKGFFKRSVQNKKVYHCSQDNCCEIDKQNRNRCQSCRFRKCISKGMLTEAVREDRMPGGRNGNSIYSNYK------------------------------QRRSIIRKT---KDYVEEQERRPFQSLPSGK------KLIKELVEMDCLDRLINLKGLRINPSANCDIAPACKRLTRIGDEIVEQLVEWTKTLPFFDELPVEAHTHLLTQRWAELVLLSAGYYACSVFTPDSPDTTEMIDETDEISFTNPQVNLRLLQNRLSLVLGKEIPLEHVAKEAGPLVTRFTTLLHSFSNLKVSPEAYVCIKAITLLHLSADSTLDRSIIDKVNTLQDHFVKTLQIHL--HQPGEDAQTTSLAQILDWLPDLRNASSVLLHSKMFYVPFLL 463          
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|68056708|sp|Q9W539.4|HR4_DROME (RecName: Full=Hormone receptor 4; Short=dHR4; AltName: Full=Nuclear receptor subfamily 6 group A member 2)

HSP 1 Score: 254.218 bits (648), Expect = 1.062e-71
Identity = 141/310 (45.48%), Postives = 196/310 (63.23%), Query Frame = 0
Query:  316 NINILRAALTGNSQISTQYKHLFVNRDAEKN---SFDH-MQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHG-------------------STRMGTIRTDG----------EKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPD-RVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSIV 591
            N  IL+ ALT  S+I      L     + K+   S++H + +I  LI CD  EDIATL +  E L ++ S++ +KLC IGDSIV+KLV WT++LPFY E+PV++HTKLLT KWHE+L+LTT+AYQA+HG                   ST  GT  +            +  E   EV+++L TLQTCLT++MG+PI M+QL+ DVG+MV+K+T++  +FR+ KLKMEEYVCLKV  ++         L  I  RY++ LR+Y     P  P  R+ +LL  +PE++ AA+LLLESKMFYVPF+LNS+ +
Sbjct: 1213 NGTILKTALTNPSEIVHLRHRLDSAVSSSKDRQISYEHALGMIQTLIDCDAMEDIATLPHFSEFL-EDKSEISEKLCNIGDSIVHKLVSWTKKLPFYLEIPVEIHTKLLTDKWHEILILTTAAYQALHGKRRGEGGGSRHGSPASTPLSTPTGTPLSTPIPSPAQPLHKDDPEFVSEVNSHLSTLQTCLTTLMGQPIAMEQLKLDVGHMVDKMTQITIMFRRIKLKMEEYVCLKVYILLNKEV----ELESIQERYVQVLRSYLQNSSPQNPQARLSELLSHIPEIQAAASLLLESKMFYVPFVLNSASI 1517          

HSP 2 Score: 203.756 bits (517), Expect = 1.746e-54
Identity = 93/154 (60.39%), Postives = 107/154 (69.48%), Query Frame = 0
Query:  156 INMEKLWDGDRTQLPAN---AKKLTEGTTQEGDDHI------------------------EEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNM 282
            +NME+LW GD +QLP     A  L+    Q G  +                         +E+ L+CMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+
Sbjct:  855 LNMERLWAGDYSQLPPGQLQALNLSAQQQQWGSSNSTGLGGVGGGMGGRNLEAPHEPTDEDEQPLVCMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGTCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNL 1008          
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|148886998|sp|P70033.2|NR6A1_XENLA (RecName: Full=Nuclear receptor subfamily 6 group A member 1; AltName: Full=Germ cell nuclear factor; Short=GCNF; Short=xGCNF)

HSP 1 Score: 205.682 bits (522), Expect = 8.101e-59
Identity = 137/448 (30.58%), Postives = 214/448 (47.77%), Query Frame = 0
Query:  185 DDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNS--GAVY--------NMYKVKYKKNKNKSSGKTGGEI------STKETHQFDMPCQNINILRAALTGNSQISTQY------------KHLFVNR------DAEKNSFDHMQ--LINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLT--TSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSD----STSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590
            DD +++ +  C+IC D+ATGLHYGII+CEGCKGFFKR++ NKR+Y C  D +C +++ QRNRCQYCR  KCL  GM   A+RED MPGGRN   G V          M   ++++  N S    G         +  E++Q        +     L G S +  QY             HLF          A+  S D     LIN L+  +D E + T   I +      S+L   LC++ D ++++ + W ++LPF+ +L +  +T LL+  W EL++L+  T+  + I G     T +    + ELH                         +  +D   ++E++  +   F Q K+  EEYVC+K I  + N D    S++  +  +  RY    + +    +P +P+R   L++ LPEVR  A  L+   +  +P L  + +
Sbjct:    6 DDRVDQRA--CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISDEEVERIMSGQEFEEEANTSWSNNGDSDHSSPGNAVSESNQPSPVSTPSSSRSMELNGFSSLRDQYLGTPGPTHYQYLPHLFSFSAHPTIIPAQSRSLDPQSHTLINQLLTAEDIEPLNTPMLIEDGYKVTQSELFALLCRLADELLFRQITWVKKLPFFCDLSIKDYTCLLSTTWQELILLSSITTYSKQIFGDLTDVTSKYSPSEDELH-------------------------RFSEDGMEVMERLIYLFRKFSQLKVSNEEYVCMKAINFL-NQDIQGISSASQVEQLNKRYWYVCQDFTEYRYPHQPNRFPDLMMCLPEVRYIAGKLVNVPLEQLPLLFKAFL 425          
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|82198466|sp|Q66JK1.1|NR6A1_XENTR (RecName: Full=Nuclear receptor subfamily 6 group A member 1; AltName: Full=Germ cell nuclear factor; Short=GCNF)

HSP 1 Score: 202.216 bits (513), Expect = 1.792e-57
Identity = 135/448 (30.13%), Postives = 211/448 (47.10%), Query Frame = 0
Query:  185 DDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNS--GAVY--------NMYKVKYKKNKNKSSGKTGGEI------STKETHQFDMPCQNINILRAALTGNSQISTQY------------KHLFVNR------DAEKNSFDHMQ--LINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLT--TSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSD----STSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590
            DD +++ +  C+IC D+ATGLHYGII+CEGCKGFFKR++ NKR+Y C  D +C +++ QRNRCQYCR  KCL  GM   A+RED MPGGRN   G V          M   ++++  N S    G            E++Q        +     L G   +  QY             HLF           +  S D     LIN L+  +D E ++T   I +      S+L   LC++ D ++++ + W ++LPF+ +L +  +T LL+  W EL++L+  T+  + I G     T +    + ELH                         +  +D   ++E++  +   F Q K+  EEYVC+K I  + N D    S+   +  +  RY    + +    +P +P+R   L++ LPEVR  A  L+   +  +P L  + +
Sbjct:    6 DDRVDQRA--CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISDEEIERIMSGQEFEEEANTSWSNNGDSDHSSPGNGVSESNQPSPVSTPSSSRSMELNGFGSLRDQYLGTPGPMHYQYLPHLFSYSAHPTLIPTQSRSLDPQSHTLINQLLTAEDIEPLSTPMLIEDGYKVTQSELFALLCRLADELLFRQITWVKKLPFFCDLSIKDYTCLLSTTWQELILLSSLTTYSKQIFGDLADVTSKYSPSEDELH-------------------------RFSEDGMEVMERLIYLFRKFSQLKVSNEEYVCMKAINFL-NQDIQGISSVSQVEQLNKRYWYVCQDFTEYRYPHQPNRFPDLMMCLPEVRYIAGKLVNVPLEQLPLLFKAFL 425          
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|150383440|sp|Q9PU65.2|GCNFA_DANRE (RecName: Full=Nuclear receptor subfamily 6 group A member 1-A; AltName: Full=Germ cell nuclear factor A; Short=GCNF-A; Short=zfGCNF)

HSP 1 Score: 197.978 bits (502), Expect = 1.502e-55
Identity = 133/450 (29.56%), Postives = 210/450 (46.67%), Query Frame = 0
Query:  181 TQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRN-----------------SGAVY----NMYKVKYKKNKNK---------SSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYK---HLFVNRDAEKNSFDHMQ-LINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTT-SAYQA-IHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSD----STSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590
             +E   H + E   C+IC D+ATGLHYGII+CEGCKGFFKR++ NKR+Y C  D +CE+++ QRNRCQYCR  KCL  GM   A+RED MPGGRN                 SG  +    NM +  +  N +          S G     +ST  +++          LR    GN+ ++  Y+   HLF      ++ +     LI  L+  +D   + T   I +       +L   LC++ D ++++ + W ++LPF+ +L ++ +T+LL+  W EL++L   + Y A + G     T +      ELH                            +D   ++EK+  +   F Q K+  EEY C+K I  + N D    +    L  +  RY    + Y    +P +P R  ++++ LPE+R  A  L+   +  +P L  + +
Sbjct:   29 AEENGIHDQAEQRSCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCEMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISDEEIERIMSGQEFKDEANMPEHTWGNNGDSDHSSPGNGVSDGNQPSPVSTLSSNRSVELNGYTTALREQYIGNA-MAQHYQFLPHLFGYAAQPRSLYPQSHTLIGQLVAAEDLAPLGTPMLIEDGYRVTQVELFALLCRLADELLFRQISWIKKLPFFCDLSIEDYTRLLSATWQELILLACLTVYSAQVLGDLANVTHKYTPSDDELH-------------------------SFSEDGMEVMEKLIYLFRKFHQLKVSNEEYACMKAINFL-NQDIRGLTNVTQLEQLNKRYWYVCQDYTEYKYPHQPKRFPEIMMCLPEIRCIAGKLVNIPLEQLPLLFKAVL 451          
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|12643728|sp|Q15406.2|NR6A1_HUMAN (RecName: Full=Nuclear receptor subfamily 6 group A member 1; AltName: Full=Germ cell nuclear factor; Short=GCNF; Short=hGCNF; AltName: Full=Retinoid receptor-related testis-specific receptor; Short=RTR; Short=hRTR)

HSP 1 Score: 191.815 bits (486), Expect = 3.299e-53
Identity = 132/456 (28.95%), Postives = 208/456 (45.61%), Query Frame = 0
Query:  175 KLTEGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRN-----------------SGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAA-LTGNSQISTQY------------KHLF--------VNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLT--TSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSD----STSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLL 586
            +L  GT    DD  E+ +  C+IC D+ATGLHYGII+CEGCKGFFKR++ NKR+Y C  D +C +++ QRNRCQYCR  KCL  GM   A+RED MPGGRN                 SG  +      +  + +      G   S  E++Q   P   ++  R+  L G      QY             HLF        + + A         LI+ L+  +D E + T   I +      ++L   LC++ D ++++ + W ++LPF+ EL +  +T LL+  W EL++L+  T   + I G     T +      ELH+     +                          ++E++  +   F Q K+  EEY C+K I  + N D    +++  L  +  RY    + +    +  +P+R   L++ LPE+R  A  ++   +  +P L 
Sbjct:   42 ELDPGTISVSDDRAEQRT--CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISEEEIERIMSGQEFEEEANHWSNHGDSDHSSPGNRAS--ESNQ-PSPGSTLSSSRSVELNGFMAFREQYMGMSVPPHYQYIPHLFSYSGHSPLLPQQARSLDPQSYSLIHQLLSAEDLEPLGTPMLIEDGYAVTQAELFALLCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLSSLTVYSKQIFGELADVTAKYSPSDEELHRFSDEGM-------------------------EVIERLIYLYHKFHQLKVSNEEYACMKAINFL-NQDIRGLTSASQLEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYIAGKMVNVPLEQLPLLF 466          
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|82225956|sp|Q4V8R7.1|GCNFB_DANRE (RecName: Full=Nuclear receptor subfamily 6 group A member 1-B; AltName: Full=Germ cell nuclear factor B; Short=GCNF-B)

HSP 1 Score: 191.045 bits (484), Expect = 4.583e-53
Identity = 132/436 (30.28%), Postives = 207/436 (47.48%), Query Frame = 0
Query:  183 EGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNS--GAVYNMYKVKYKKNKNKSSG---KTGGEISTKETHQFDMPCQNINILRAA------------LTGNSQISTQYKHLFV----NRDAEKNSFDHMQ---LINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDST----SPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590
            E DD  E     C+IC D+A+GLHYGII+CEGCKGFFKR++ NKRIY C  D +C++++ QRNRCQYCR QKCL  GM   A+RED MPGGRN   G V+    +  ++ +   SG   K G ++S   +H +       N L                  +  IS Q  H F+           S    Q   L   ++  +D   + T   I +  +   S+L   LC I D ++++ + W +RLPF+ +L +   T+LL   WH+L++L++     +H +  +      GE A +    + +  TLQ              +  +D   ++E +  +   F Q  +  EEY CLK I ++ N ++T    +  L  +  RY    R    + HP  P R   ++  L E+R  +  ++   +  +P L  + +
Sbjct:   32 ETDDGGER---WCLICGDRASGLHYGIISCEGCKGFFKRSICNKRIYRCNRDKNCQMSRKQRNRCQYCRLQKCLQMGMNRKAIREDGMPGGRNKMIGPVH----ISLEEIERLMSGQEFKEGSDLSDSWSHGYSNHSSPGNSLSEGGQSLSFSSSRSVSCRDECISPQLTHTFLMCKYPLPPPTGSILKTQTHTLTGQILADEDLTPLTTPMLIEDGYSVTQSELLALLCGIADELLFRQIVWLKRLPFFTDLSIKDCTRLLGSSWHQLILLSSI---TVHSAQIL------GELANVTHHYTPSSHTLQ--------------RFGEDAMEVMESLNFLFRKFHQLNISNEEYSCLKTITLL-NQETTGLCNTSMLKQLSERYWTLCRELTERLHPQRPKRFSDIITCLTEIRHTSGKMMSIPLEQLPLLFKAVL 436          
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|160419011|sp|A0P8Z4.2|NR6A1_PIG (RecName: Full=Nuclear receptor subfamily 6 group A member 1; AltName: Full=Germ cell nuclear factor; Short=GCNF)

HSP 1 Score: 190.66 bits (483), Expect = 9.936e-53
Identity = 131/458 (28.60%), Postives = 206/458 (44.98%), Query Frame = 0
Query:  175 KLTEGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRN-----------------SGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQY------------KHLFV-----------NRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLT--TSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSD----STSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLL 586
            +L   T    DD  E+ +  C+IC D+ATGLHYGII+CEGCKGFFKR++ NKR+Y C  D +C +++ QRNRCQYCR  KCL  GM   A+RED MPGGRN                 SG  +      +  + +      G   S  E++Q   P   ++     L G      QY             HLF             R  +  S+    LI+ L+  +D E + T   I +      ++L   LC++ D ++++ + W ++LPF+ EL +  +T LL+  W EL++L+  T   + I G     T +      ELH+     +                          ++E++  +   F Q K+  EEY C+K I  + N D    +++  L  +  RY    + +    +  +P+R   L++ LPE+R  A  ++   +  +P L 
Sbjct:   42 ELDPSTISVPDDRAEQRT--CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISEEEIERIMSGQEFEEEANHWSNHGDSDHSSPGNRAS--ESNQ-PSPGSTLSSRSVELNGFMAFRDQYMGMSVPPHYQYIPHLFSYSAHSPLLPPQARSLDPQSYS---LIHQLVSAEDLEPLGTPMLIEDGYAVTQAELFALLCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLSSLTVYSKQIFGELADVTAKYSPSDEELHRFSDEGM-------------------------EVIERLIYLYHKFHQLKVSNEEYACMKAINFL-NQDIRGLTSASQLEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYIAGKMVNVPLEQLPLLF 465          
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|10720144|sp|Q64249.1|NR6A1_MOUSE (RecName: Full=Nuclear receptor subfamily 6 group A member 1; AltName: Full=Germ cell nuclear factor; Short=GCNF; Short=mGCNF; AltName: Full=Retinoid receptor-related testis-specific receptor; Short=RTR)

HSP 1 Score: 187.963 bits (476), Expect = 1.162e-51
Identity = 130/446 (29.15%), Postives = 204/446 (45.74%), Query Frame = 0
Query:  185 DDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRN-----------------SGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAA-LTGNSQISTQY------------KHLFVNRD------AEKNSFD--HMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLT--TSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSD----STSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLL 586
            DD  E+ +  C+IC D+ATGLHYGII+CEGCKGFFKR++ NKR+Y C  D +C +++ QRNRCQYCR  KCL  GM   A+RED MPGGRN                 SG  +      +  + +      G   S  E++Q   P   ++  R+  L G      QY             HLF           +  S D     LI+ L+  +D E + T   I +      ++L   LC++ D ++++ + W ++LPF+ EL +  +T LL+  W EL++L+  T   + I G     T +      ELH+     +                          ++E++  +   F Q K+  EEY C+K I  + N D    +++  L  +  RY    + +    +  +P+R   L++ LPE+R  A  ++   +  +P L 
Sbjct:   67 DDRAEQRT--CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISEEEIERIMSGQEFEEEANHWSNHGDSDHSSPGNRAS--ESNQ-PSPGSTLSSSRSVELNGFMAFRDQYMGMSVPPHYQYIPHLFSYSGHSPLLPPQARSLDPQSYSLIHQLMSAEDLEPLGTPMLIEDGYAVTQAELFALLCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLSSLTVYSKQIFGELADVTAKYSPSDEELHRFSDEGM-------------------------EVIERLIYLYHKFHQLKVSNEEYACMKAINFL-NQDIRGLTSASQLEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYIAGKMVNVPLEQLPLLF 481          
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|55584048|sp|Q05192.3|FTF1B_DROME (RecName: Full=Nuclear hormone receptor FTZ-F1 beta; AltName: Full=Nuclear hormone receptor HR39; Short=dHR39; AltName: Full=Nuclear receptor subfamily 5 group B member 1)

HSP 1 Score: 167.548 bits (423), Expect = 9.248e-43
Identity = 124/440 (28.18%), Postives = 194/440 (44.09%), Query Frame = 0
Query:  195 CMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVY-----NMYKVKYKKNKNKSSGKTGGEISTKETHQ----------FDMPCQNINILRAALTGNSQISTQY-----------------------KHLFVNRDAEKNSFD-----------------------HMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIH--GSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPI---YNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVR 568
            C IC DK +G HYGI +CE CKGFFKRTVQN++ Y CV  G C+++ + R +C  CRF+KCL KGM L A+REDR  GGR++         +M       ++  ++       S ++ HQ            +PC        +L G S  S +                        +HL+   DAE    +                       H QL N L+        A L + GE  N    DL   LC + D  +YK+V+W + LP +  + +D    LL + W ELL+ +   +++I   G  +M    + G K  L Q  S     LQTC+  M+              N+ + + R+       ++   EYV +KVI ++++  +     V +     + L+ L+AY   H+P  P +  +LL+R+P+++
Sbjct:  376 CPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSMLSPLLSPDQAAAAAAAAAVASQQQPHQRLHQLNGFGGVPIPCSTSLPASPSLAGTSVKSEEMAETGKQSLRTGSVPPLLQEIMDVEHLWQYTDAELARINQPLSAFASGSSSSSSSSGTSSGAHAQLTNPLLAS------AGLSSNGENAN---PDLIAHLCNVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSC-CFRSIDTPGEIKM----SQGRKITLSQAKSNG---LQTCIERML--------------NLTDHLRRL-------RVDRYEYVAMKVIVLLQSDTTELQEAVKVRECQEKALQSLQAYTLAHYPDTPSKFGELLLRIPDLQ 777          
BLAST of orphan nuclear receptor vs. nr
Match: gi|985401230|ref|XP_015368325.1| (PREDICTED: hormone receptor 4-like isoform X2 [Diuraphis noxia] >gi|985401232|ref|XP_015368326.1| PREDICTED: hormone receptor 4-like isoform X2 [Diuraphis noxia] >gi|985401234|ref|XP_015368327.1| PREDICTED: hormone receptor 4-like isoform X2 [Diuraphis noxia])

HSP 1 Score: 523.472 bits (1347), Expect = 1.358e-172
Identity = 274/493 (55.58%), Postives = 335/493 (67.95%), Query Frame = 0
Query:  154 IPINMEKLWDGDRTQLPANAK------KLTEGT-----------------------TQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGK----------TGGEISTKETHQFDMPCQ------NINILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHG------STRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMV-ENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590
            +P+NME+LW GD +QLP  A        LT  T                        +E D+  +E+ ++CMIC+D+ATGLHYGIITCEGCKGFFKRTVQN+RIY C+A+G CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKVKYKK +   +G+          T   ++T +T   D          N  IL+ ALT  S++    + L      +RD   +    + +I NL+ CD+F+DIATL+N+ +LL  N SDL  KL QIGDSIVYKLVQWT+RLPFY ELPV+VHT+LLTHKWHELLVLTTSAYQAIHG      ST M   R   E +E HQEV  NL  LQ CL+SMMGKPITMDQLRQDVG MVEKIT V  +FR+ KL+MEEYVCLKVI M+ +N+ +T+  L  I  RY  CL+ Y     P++P+R+  LL RLPE++ AA+LLLESKMFYVPFLLNS+I
Sbjct:  447 VPLNMERLWAGDLSQLPVAATHQMHALNLTANTGPGWPMAGSNNDNKSAPVNAYHQMEEADE--QEQPMVCMICDDRATGLHYGIITCEGCKGFFKRTVQNRRIYTCIAEGTCEITKAQRNRCQYCRFKKCIGQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKKRPPKNGQVKMEKSVACTTASTMTTIKTENQDNNSSSMSTLVNGTILKTALTNPSEVVYLRQRLDNAVSSSRDRTFSIEATVNMIKNLMDCDEFQDIATLRNMEDLLEHN-SDLSAKLMQIGDSIVYKLVQWTKRLPFYLELPVEVHTRLLTHKWHELLVLTTSAYQAIHGPQKIWNSTNMNGDR--NEDSEFHQEVFQNLCILQNCLSSMMGKPITMDQLRQDVGVMVEKITHVTLMFRRVKLRMEEYVCLKVIIMLTQNNGNTTSELETIQERYTSCLKTYVEHTFPMQPNRLQDLLQRLPEIQSAASLLLESKMFYVPFLLNSTI 934          
BLAST of orphan nuclear receptor vs. nr
Match: gi|1101367760|ref|XP_018915169.1| (PREDICTED: hormone receptor 4 isoform X2 [Bemisia tabaci])

HSP 1 Score: 520.005 bits (1338), Expect = 3.801e-171
Identity = 279/481 (58.00%), Postives = 339/481 (70.48%), Query Frame = 0
Query:  155 PINMEKLWDGDRTQLPA-------NAKKLTEGTTQE----------GDDHI--------------------EEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNK-NKSSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL--FVNRDAEKN-SFDH-MQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPS-LVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590
            P+NMEKLW GD +QLPA       N      G              GD H                     +E+ +ICMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKVKYKK+K N  +G+   E    +  +  +P   +N  IL+ ALT  S++    + L   V+   ++N + D  + +I  L+ CD+F+DIATL+N+ +LL ++ SDL  KL +IGDSIVYKLVQWT+RLPFY ELPV+VHTKLLTHKWHELLVLTTSAYQAIHG+ ++G+  TDG +A+  Q+VS NL TLQTCLTSMMG+PITMDQLRQDVG MVEKIT V  +FR+ KL+MEEYVCLKVI M+  S+    S L  I  RY+ CL+ Y     P +P+R   LLVRLPEV+ AA+LLL+SKMFYVPFLLNS+I
Sbjct:  463 PLNMEKLWAGDLSQLPASQQIQALNLSSYGAGPPSSCWPVPYIKANGDAHAAGHALNPGPVVQKIHEETEEDEQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGICEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKHKKNTRNGQLKLEGKPNKGPEPTIPAHLVNGTILKTALTNPSEVVHLRQRLDNTVSSSRDRNLTLDATLSMIQGLVDCDEFQDIATLQNLDDLL-EHKSDLSDKLMKIGDSIVYKLVQWTKRLPFYLELPVEVHTKLLTHKWHELLVLTTSAYQAIHGAHKLGSTSTDGTEADFTQQVSNNLCTLQTCLTSMMGRPITMDQLRQDVGLMVEKITHVTLMFRRIKLRMEEYVCLKVIIMLNPSNRAGTSELESILERYMSCLKTYVENTAPQQPNRFHDLLVRLPEVQSAASLLLDSKMFYVPFLLNSTI 942          
BLAST of orphan nuclear receptor vs. nr
Match: gi|1101367758|ref|XP_018915168.1| (PREDICTED: hormone receptor 4 isoform X1 [Bemisia tabaci])

HSP 1 Score: 519.235 bits (1336), Expect = 8.641e-171
Identity = 279/481 (58.00%), Postives = 339/481 (70.48%), Query Frame = 0
Query:  155 PINMEKLWDGDRTQLPA-------NAKKLTEGTTQE----------GDDHI--------------------EEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNK-NKSSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL--FVNRDAEKN-SFDH-MQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPS-LVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590
            P+NMEKLW GD +QLPA       N      G              GD H                     +E+ +ICMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKVKYKK+K N  +G+   E    +  +  +P   +N  IL+ ALT  S++    + L   V+   ++N + D  + +I  L+ CD+F+DIATL+N+ +LL ++ SDL  KL +IGDSIVYKLVQWT+RLPFY ELPV+VHTKLLTHKWHELLVLTTSAYQAIHG+ ++G+  TDG +A+  Q+VS NL TLQTCLTSMMG+PITMDQLRQDVG MVEKIT V  +FR+ KL+MEEYVCLKVI M+  S+    S L  I  RY+ CL+ Y     P +P+R   LLVRLPEV+ AA+LLL+SKMFYVPFLLNS+I
Sbjct:  469 PLNMEKLWAGDLSQLPASQQIQALNLSSYGAGPPSSCWPVPYIKANGDAHAAGHALNPGPVVQKIHEETEEDEQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGICEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKHKKNTRNGQLKLEGKPNKGPEPTIPAHLVNGTILKTALTNPSEVVHLRQRLDNTVSSSRDRNLTLDATLSMIQGLVDCDEFQDIATLQNLDDLL-EHKSDLSDKLMKIGDSIVYKLVQWTKRLPFYLELPVEVHTKLLTHKWHELLVLTTSAYQAIHGAHKLGSTSTDGTEADFTQQVSNNLCTLQTCLTSMMGRPITMDQLRQDVGLMVEKITHVTLMFRRIKLRMEEYVCLKVIIMLNPSNRAGTSELESILERYMSCLKTYVENTAPQQPNRFHDLLVRLPEVQSAASLLLDSKMFYVPFLLNSTI 948          
BLAST of orphan nuclear receptor vs. nr
Match: gi|641663899|ref|XP_008182814.1| (PREDICTED: hormone receptor 4 isoform X2 [Acyrthosiphon pisum])

HSP 1 Score: 515.768 bits (1327), Expect = 1.660e-169
Identity = 273/491 (55.60%), Postives = 333/491 (67.82%), Query Frame = 0
Query:  154 IPINMEKLWDGDRTQLPANAK------KLTEGTT-------QEGDDH--------------IEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEIST---------------KETHQFDMPCQ-NINILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHG------STRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMV-ENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590
            +P+NME+LW GD +QLP  A        LT  T          GD+                +E+ ++CMIC+D+ATGLHYGIITCEGCKGFFKRTVQN+RIY C+A+G CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKVKYKK +   +G+   E S                ++ +   M    N  IL+ ALT  S++    + L      +RD   +    + +I NL+ CD+F+DIATL+N+ +LL  N SDL  KL QIGDSIVYKLVQWT+RLPFY ELPV+VHT+LLTHKWHELLVLTTSAYQAIHG      ST M   R   E +E HQEV  NL  LQ CL+SMMGKPITMDQLRQDVG MVEKIT V  +FR+ KL+MEEYVCLKVI M+ +N+ +T+  L  I  RY  CL+ Y     P++P+R+  LL RLPE++ AA+LLLESKMFYVPFLLNS+I
Sbjct:  457 VPLNMERLWAGDLSQLPVAATHQMHALNLTANTGPGWPMAGSNGDNKSAPVNAYHQMEEAEEQEQPMVCMICDDRATGLHYGIITCEGCKGFFKRTVQNRRIYTCIAEGTCEITKAQRNRCQYCRFKKCIGQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKKRPPKNGQVKMEKSVTCTTASTMTTIKTENQDNNSSSMSTLVNGTILKTALTNPSEVVYLRQRLDNAVSSSRDRTFSIEATVNMIKNLMDCDEFQDIATLRNMEDLLEHN-SDLSAKLMQIGDSIVYKLVQWTKRLPFYLELPVEVHTRLLTHKWHELLVLTTSAYQAIHGPQKIWNSTNMNGDR--NEDSEFHQEVFQNLCILQNCLSSMMGKPITMDQLRQDVGVMVEKITHVTLMFRRLKLRMEEYVCLKVIIMLTQNNGNTTSELETIQERYTSCLKTYVEHTFPMQPNRLQDLLQRLPEIQSAASLLLESKMFYVPFLLNSTI 944          
BLAST of orphan nuclear receptor vs. nr
Match: gi|321456767|gb|EFX67867.1| (hypothetical protein DAPPUDRAFT_203579 [Daphnia pulex])

HSP 1 Score: 508.449 bits (1308), Expect = 1.892e-169
Identity = 261/421 (62.00%), Postives = 312/421 (74.11%), Query Frame = 0
Query:  182 QEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKY---KKNKNKS----SGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHL----FVNRDAEKNSFD-HMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590
            QE D   E+  +ICMICEDKATGLHYGIITCEGCKGFFKRTVQNKR+Y CVA+G+CEI KAQRNRCQYCRFQKCL +GMVLAAVREDRMPGGRNSGAVYN+YKVKY   KKN NKS    +  T G ++ ++  Q      N NIL+ ALT  S++    + L      +RDA    ++  M  I  LI CD+FEDIATLK + ELL+   ++L  KLCQIGDSIVYKLVQWT+RLPFY ELPV+VHT+LLTHKWHELLVLTTSAYQAIHG  +  +     E  +  Q+VS NLVTLQTCL +MMG+P+T+DQLRQDVG MVE+IT V  + ++ +L+MEEYVCLKVIAM+   +     L  I  RY++CL++Y   ++P  P R   LL RLPEV+ AA LLLESKMFYVPFLLNS+I
Sbjct:  316 QEDD---EDTPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRVYTCVAEGNCEITKAQRNRCQYCRFQKCLAQGMVLAAVREDRMPGGRNSGAVYNLYKVKYRKHKKNNNKSPPGTTANTNGGVTAQQQQQVPR-IANGNILKTALTNPSEVLHLRRRLESAVTSSRDAISMPYETAMPTICTLIYCDEFEDIATLK-LDELLD-TKAELSDKLCQIGDSIVYKLVQWTKRLPFYSELPVEVHTRLLTHKWHELLVLTTSAYQAIHGPRKTWSGPEPTEH-DFVQQVSANLVTLQTCLAAMMGRPLTLDQLRQDVGLMVERITHVTMMLQRSQLRMEEYVCLKVIAMLSQRNV---ELEAIQERYMQCLQSYVEHNYPQSPGRFSDLLTRLPEVQSAATLLLESKMFYVPFLLNSAI 726          
The following BLAST results are available for this feature:
BLAST of orphan nuclear receptor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25
Match NameE-valueIdentityDescription
EMLSAG000000085432.697e-13974.73supercontig:LSalAtl2s:LSalAtl2s527:163002:172818:1... [more]
EMLSAG000000044511.718e-3929.82supercontig:LSalAtl2s:LSalAtl2s231:945915:949068:1... [more]
EMLSAG000000089023.753e-3463.54supercontig:LSalAtl2s:LSalAtl2s554:572309:581835:1... [more]
EMLSAG000000099698.686e-3424.22supercontig:LSalAtl2s:LSalAtl2s651:302705:304416:-... [more]
EMLSAG000000130045.106e-2759.04supercontig:LSalAtl2s:LSalAtl2s98:942409:953748:1 ... [more]
EMLSAG000000080711.169e-2631.33supercontig:LSalAtl2s:LSalAtl2s47:304551:317770:1 ... [more]
EMLSAG000000019191.649e-2456.96supercontig:LSalAtl2s:LSalAtl2s132:616435:622808:1... [more]
EMLSAG000000124861.295e-2324.60supercontig:LSalAtl2s:LSalAtl2s91:348479:353390:-1... [more]
EMLSAG000000099416.332e-2325.38supercontig:LSalAtl2s:LSalAtl2s649:484085:485655:-... [more]
EMLSAG000000073614.804e-2226.59supercontig:LSalAtl2s:LSalAtl2s418:374353:376789:1... [more]

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BLAST of orphan nuclear receptor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|75025546|sp|Q9U2R6.2|NHR91_CAEEL1.335e-7436.76RecName: Full=Nuclear hormone receptor family memb... [more]
gi|68056708|sp|Q9W539.4|HR4_DROME1.062e-7145.48RecName: Full=Hormone receptor 4; Short=dHR4; AltN... [more]
gi|148886998|sp|P70033.2|NR6A1_XENLA8.101e-5930.58RecName: Full=Nuclear receptor subfamily 6 group A... [more]
gi|82198466|sp|Q66JK1.1|NR6A1_XENTR1.792e-5730.13RecName: Full=Nuclear receptor subfamily 6 group A... [more]
gi|150383440|sp|Q9PU65.2|GCNFA_DANRE1.502e-5529.56RecName: Full=Nuclear receptor subfamily 6 group A... [more]
gi|12643728|sp|Q15406.2|NR6A1_HUMAN3.299e-5328.95RecName: Full=Nuclear receptor subfamily 6 group A... [more]
gi|82225956|sp|Q4V8R7.1|GCNFB_DANRE4.583e-5330.28RecName: Full=Nuclear receptor subfamily 6 group A... [more]
gi|160419011|sp|A0P8Z4.2|NR6A1_PIG9.936e-5328.60RecName: Full=Nuclear receptor subfamily 6 group A... [more]
gi|10720144|sp|Q64249.1|NR6A1_MOUSE1.162e-5129.15RecName: Full=Nuclear receptor subfamily 6 group A... [more]
gi|55584048|sp|Q05192.3|FTF1B_DROME9.248e-4328.18RecName: Full=Nuclear hormone receptor FTZ-F1 beta... [more]

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BLAST of orphan nuclear receptor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|985401230|ref|XP_015368325.1|1.358e-17255.58PREDICTED: hormone receptor 4-like isoform X2 [Diu... [more]
gi|1101367760|ref|XP_018915169.1|3.801e-17158.00PREDICTED: hormone receptor 4 isoform X2 [Bemisia ... [more]
gi|1101367758|ref|XP_018915168.1|8.641e-17158.00PREDICTED: hormone receptor 4 isoform X1 [Bemisia ... [more]
gi|641663899|ref|XP_008182814.1|1.660e-16955.60PREDICTED: hormone receptor 4 isoform X2 [Acyrthos... [more]
gi|321456767|gb|EFX67867.1|1.892e-16962.00hypothetical protein DAPPUDRAFT_203579 [Daphnia pu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold491_size156641supercontigscaffold491_size156641:8337..11777 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteF:binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold491_size156641-snap-gene-0.24-mRNA-1maker-scaffold491_size156641-snap-gene-0.24-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold491_size156641:8337..11777+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold491_size156641-snap-gene-0.24 ID=maker-scaffold491_size156641-snap-gene-0.24|Name=orphan nuclear receptor|organism=Tigriopus kingsejongensis|type=gene|length=3441bp|location=Sequence derived from alignment at scaffold491_size156641:8337..11777+ (Tigriopus kingsejongensis)
GTGACACGAACGAAGGGACGTATGATGCCGACCTGCAGCATAATTCCGTG AGCAACAGTCTGAGCGTGAGTTCCTCGTTCATGGGCGTGTCGCCCATGTC CGAGAAACCGCCGTCCATCCACGAAAGCAGTCTCATAACCAAAGACCATC ATCACCACCACCACCATCATCGGAACACCTTGAAATGGGCCAAGAACTGC AATCTGGCCGTGTCCACATCACTCCCAACCTCGGTCCCTGCGCCAGAATC TCCTCCCAAGTACATGGTTTCCCCACTCTATCCCAACTCCATGGTGGTTA GACAGGACGAACATCACTATGAGGAGCACCATAGGCTCTCCGAGCAGGCC CAGAAGATCTCTTCGGCTGTGGATGGAATGCTTAGTTTGCAGTCCGCGAA TACCGTCGCCCGCGTCTCGTCCTCGGGGTCGTCGATGGAAAAAGTATTCC CCGTGTGTCCCAGATCCGAGGGCTCGTCCTACACCCGGGGCATTCCCATC AACATGGAAAAGCTATGGGACGGAGATCGGACCCAACTCCCAGCCAACGC CAAGAAACTGACTGAGGTAACAATCCCGGGCCATGGCCCTCTCGAGACCC GTGGGCTGTGATGGCCCAGTCTGATCTGTGTATAAACCGTGGATCTTTTT GTGAATACAGGGAACAACGCAGGAGGGTGACGACCATATTGAGGAGGAAT CACTGATATGCATGATTTGCGAAGACAAAGCGACTGGTCTTCATTATGGA ATCATAACGTGTGAAGGGTGAGTGGATTTGTATGCGGGCTATTTCTGCCA TTTACTCCATCGGGTGCCCAACCCCCTAAGTTAGCTTGTCCATGAAGTAA GGAGCGAAAACGAATTGATCCCATAGTGAGTTGAAAAGTTGGGGTCTGAC TGAAATTAATGGAGGGAATCGACCGGAATGAATCTTAGCTAGAGTGTCCT TGGGGTTGATATCTCTCTTTTTTGGCCCGGCTGATCTGAGCTGGCCGATA GCAGTCCTATGTGCCAAGTGAACTGATTTGTGTTATTTTTCTTTCATGCT TAAAGATGCAAGGGATTTTTCAAGAGAACTGTCCAGAACAAACGCATCTA TAATTGTGTGGCCGATGGGCATTGTGAAATCAACAAAGCGCAAAGGAATC GATGCCAATATTGTCGGTTTCAAAAGTGTCTTCATAAGGGAATGGTTCTT GCAGGTAATTGCCTATCTCACTGGCAACCCAATGTCGGCCCAATCAATGC TGGTTCCATTTCTAGCTGTTCGTGAAGACCGAATGCCTGGTGGTCGAAAT TCGGGGGCTGTCTACAACATGTATAAGGTGAGTGTACGAAAGCCGGTCGG TCACCTTATGCCCCCCCCCCTGCAGGCCATAATGTGGGTGATTCCATTCC AGGTCAAGTACAAAAAGAATAAGAACAAATCATCCGGGAAGACAGGGGGC GAGATTTCCACCAAGGAGACGCATCAGTTTGACATGCCCTGTCAAAATAT AAACATACTTCGAGCTGCGTTAACTGGAAACTCTCAGGTAACGATTCCTA GCGTCAGGAGGATTGAATGGTTTGCACACCAAGTGTCTGCACCATGCTCC GGTTTTGAGATTGGGCTAGCTTTTGATCACGTCGCTTTTCTCTGCAGATT TCCACACAATATAAACACTTATTTGTCAATCGAGATGCCGAAAAGAATTC CTTTGATCACATGCAACTGATCAATAATCTCATTGTTTGCGATGACTTTG AAGACATTGCCACTTTGAAGGTGAGTGTGAATGGCAGCCCAAGTGTTCAT TGGAACACAGATGTGAAAGCGATGGATCTCCACGAGGGATTAGAGATGGT TTCGTCATGGGTTCGGTTCCTTTCTAGAACATCGGCGAACTTCTCAATCA AAACACATCTGACTTGCAACAGAAACTTTGTCAAATTGGAGATTCAATTG TGTACAAACTAGTACAGTGGACCAGGCGGCTGCCATTCTATCACGAGCTT CCGGTGGACGTGCACACAAAATTGCTAACTCACAAATGGCATGAACTACT GGTTCTGACCACGTCCGCGTATCAAGCAATACACGGGTCCACACGAATGG GCACAATTAGAACGGACGGGGAAAAGGCCGAGTTGCACCAGGAGGTAAGC CCTACGATTCTTCTTGTAGACCAGAATGGAGTGTTATCCCAGTTCCATGT TGTTTTATTTCACTCACGCTACCTTTCCATTGCTACCTCAGGTGTCGACG AATCTCGTGACTCTGCAAACCTGTCTGACGTCAATGATGGGCAAGCCAAT CACCATGGATCAACTGAGACAAGATGTCGGGAACATGGTGGAAAAAATCA CCCGAGTCATAGCCCTTTTCCGACAATGCAAGCTGAAAATGGAAGAATAT GTTTGTCTCAAAGTCATCGCAATGGTTGAAAATTCCGGTACGACCCCCCC TCCCCCTAGTCGCCATCACGATATCAAGTCTCACGCCCGTTTCTTCCCTC ACTTTACAGACAGTACTTCACCGTCCTTGGTGCCAATTTACAATAGATAC CTTAAGTGCCTCCGAGCCTATGCAACACAACACCATCCACTGGAGCCTGA TCGAGTGGACAAACTACTAGTCCGATTGCCTGAGGTACGTGTCCGGGGCC AGGGGGAGTAGTACGCAGGCATCATGATCTGACGGTTTCCATCGATTCTC TTGCAGGTTCGTGTGGCAGCCGCATTACTTTTAGAAAGTAAAATGTTTTA TGTGCCATTCTTACTTAATTCGTCCATTGTTGGTTCTTAGAGAGCAATCT GCGAGGGTGGGATTGGCTCGTCTGGGGACGACTTATTTATTGCTCTCAAC ATGTTAGTAGGTTTATAAGGTTTGCCAGTGTTTTTTACATTTTTGTATGT TGTTAATAATAAATTTCACTTCGCATCCTGCGGGAGACATTTTGAATGAG CCCTGTGTTGGTGCCTTTGTTTCATCTGTCTCACCCGCCGGCCTCGTCGT GGGTGAGTCGATGCAGTTGGAGCTTCGCCTCCTCGATGACTTCGGGGGGA AACTTGGCCAACTCCGCGACCTCCACGCCGAAACTTTGGGTAGCTCGGCC CGCCACAATCTGGTAGAGGAGGGTGAAGCTACCATCTTGCACGGCCGCGG CGCAGTTCATGTTGAAACAAGTCGGATGGCTCTGGTCGATGTCCGACAGC TCGTGAAAGTGGGTGGCGAACAAGGTCACGGCCCGGATCTGGCTCACGAT GTGCTCGCAAATGGCCCAAGCCAGCCCGAAGCCGTCTTGAGTCGAGGTGC CCCGACCCAGTTCGTCGATGAGCACGAGGCTCTTCTCGGTCGAGTGGTTG AGGATGGCCTTGATGTCGAGCATCTCCTTGAGGAAGGTGGACGAGCCGTC CACGAGCGAGTCGTCGGCCCCAATCCGGACCGAAATGGCGT
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Synonyms
The feature 'orphan nuclear receptor' has the following synonyms
Synonym
Tk05482
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