orphan nuclear receptor, maker-scaffold491_size156641-snap-gene-0.24 (gene) Tigriopus kingsejongensis

Overview
Nameorphan nuclear receptor
Unique Namemaker-scaffold491_size156641-snap-gene-0.24
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000000733 (supercontig:LSalAtl2s:LSalAtl2s1117:84476:96586:1 gene:EMLSAG00000000733 transcript:EMLSAT00000000733 description:"maker-LSalAtl2s1117-snap-gene-1.23")

HSP 1 Score: 93.5893 bits (231), Expect = 3.461e-20
Identity = 36/70 (51.43%), Postives = 50/70 (71.43%), Query Frame = 0
Query:  191 ESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGM 260
            E + C +C DK++G+HYG+ITCEGCKGFF+R+  +   Y C    +C +++  RNRCQ+CR QKCL  GM
Sbjct:   43 EIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGM 112          
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000009940 (supercontig:LSalAtl2s:LSalAtl2s649:353131:422335:-1 gene:EMLSAG00000009940 transcript:EMLSAT00000009940 description:"maker-LSalAtl2s649-augustus-gene-4.7")

HSP 1 Score: 92.4337 bits (228), Expect = 8.765e-20
Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 0
Query:  191 ESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGR 274
            + + C++C DK++G HYG  TCEGCK FFKR+V+    Y C     C I++  RN+CQ+CR +KC+  GM   AV+  R+P  +
Sbjct:  430 QDISCVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRALTYQCRGSRSCPIDQHHRNQCQHCRLKKCIKMGMRKEAVQRGRIPASQ 513          
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000007894 (supercontig:LSalAtl2s:LSalAtl2s466:351370:353021:1 gene:EMLSAG00000007894 transcript:EMLSAT00000007894 description:"maker-LSalAtl2s466-augustus-gene-2.7")

HSP 1 Score: 90.1225 bits (222), Expect = 1.724e-19
Identity = 41/103 (39.81%), Postives = 65/103 (63.11%), Query Frame = 0
Query:  195 CMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVA--DGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSS 295
            C +C D ++G HYGI  C+GC GFFKR+++  R+Y C A  +G C ++K  RN+C+ CR ++C+  GM   AV+ +R  G RNS     M  + +K++ N ++
Sbjct:   34 CKVCTDHSSGKHYGIFACDGCAGFFKRSIRRNRLYVCKAKSEGSCLVDKTHRNQCRACRLKRCVDVGMNKDAVQHER--GPRNSTLRRQM-SLYFKEHSNNNT 133          
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000007741 (supercontig:LSalAtl2s:LSalAtl2s450:172104:174744:-1 gene:EMLSAG00000007741 transcript:EMLSAT00000007741 description:"maker-LSalAtl2s450-snap-gene-2.9")

HSP 1 Score: 89.7373 bits (221), Expect = 5.124e-19
Identity = 37/81 (45.68%), Postives = 52/81 (64.20%), Query Frame = 0
Query:  195 CMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVAD----GHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMP 271
            C +C D+++G HYGI +C+GC GFFKR++  +RIY C A     G C I+K  RN+C+ CR +KC    M   AV+ +R P
Sbjct:  108 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRQRIYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDCSMNKDAVQHERGP 188          
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000005090 (supercontig:LSalAtl2s:LSalAtl2s269:306853:308464:-1 gene:EMLSAG00000005090 transcript:EMLSAT00000005090 description:"augustus_masked-LSalAtl2s269-processed-gene-3.0")

HSP 1 Score: 87.0409 bits (214), Expect = 2.461e-18
Identity = 33/76 (43.42%), Postives = 47/76 (61.84%), Query Frame = 0
Query:  194 ICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDR 269
            +C++C D+A+G HY  + CEGCKGFF+R++     Y C  +G CEI+   R +CQ CR +KC   GM    V  +R
Sbjct:  172 LCLVCGDRASGYHYNALACEGCKGFFRRSITKNSNYTCKWNGDCEIDMYMRRKCQACRLKKCYATGMRAECVVPER 247          
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000005619 (supercontig:LSalAtl2s:LSalAtl2s301:354064:356113:1 gene:EMLSAG00000005619 transcript:EMLSAT00000005619 description:"maker-LSalAtl2s301-augustus-gene-3.7")

HSP 1 Score: 80.1073 bits (196), Expect = 3.791e-16
Identity = 36/101 (35.64%), Postives = 54/101 (53.47%), Query Frame = 0
Query:  170 PANAKKLTEGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKR-IYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDR 269
            P+   +L +    E  D ++ +  +C +CE+ A G H+G  TCEGCK FF RT  N+  I  C  +  C ++K  R  C+ CR +KC+  GM  +  R  R
Sbjct:   34 PSIGNQLEQPPKFEAMDPMQNQ--LCRVCEEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCVVDKKNRTACKACRLRKCIMVGMSKSGSRYGR 132          
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000012651 (supercontig:LSalAtl2s:LSalAtl2s959:3535:5114:-1 gene:EMLSAG00000012651 transcript:EMLSAT00000012651 description:"maker-LSalAtl2s959-snap-gene-0.24")

HSP 1 Score: 75.8702 bits (185), Expect = 9.715e-15
Identity = 39/117 (33.33%), Postives = 56/117 (47.86%), Query Frame = 0
Query:  193 LICMICEDKATG-LHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETH 308
            ++C +C DKA   +HYG I C  C+ FF+R+V     Y C  D  C I    R  CQ+CR++KCL  GM  + V  +     RN         +KY +    + GK     +T E +
Sbjct:   89 MVCNVCGDKAPDHIHYGGIACFSCRAFFRRSVPKHTTYFCSTDQACMITITTRKNCQFCRYKKCLESGMKPSWVLSEEEKSSRN--------LIKYVRKNKTTCGKNVNNNNTIEVN 197          
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000005620 (supercontig:LSalAtl2s:LSalAtl2s301:514440:538934:1 gene:EMLSAG00000005620 transcript:EMLSAT00000005620 description:"maker-LSalAtl2s301-augustus-gene-5.4")

HSP 1 Score: 71.2478 bits (173), Expect = 1.872e-14
Identity = 34/79 (43.04%), Postives = 42/79 (53.16%), Query Frame = 0
Query:  194 ICMICEDKATGLHYGIITCEGCKGFFKRTVQNKR---IYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDR 269
            IC +C++ A G H+G  TCEGCK FF RT        I  C  +  C I+K  R  C+ CR +KCL  GM  A  R  R
Sbjct:   37 ICRVCDEPAAGYHFGAFTCEGCKSFFGRTCGKSNLNSISECKNNYSCVIDKKNRTSCKACRLRKCLRVGMSKAGSRYGR 115          
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000008261 (supercontig:LSalAtl2s:LSalAtl2s49:858199:860758:1 gene:EMLSAG00000008261 transcript:EMLSAT00000008261 description:"maker-LSalAtl2s49-augustus-gene-8.3")

HSP 1 Score: 72.4034 bits (176), Expect = 1.147e-13
Identity = 32/67 (47.76%), Postives = 37/67 (55.22%), Query Frame = 0
Query:  195 CMICEDKATG-LHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGM 260
            C IC D A   +HYG I C  C+ FF+R V     Y+C  D  C I K  R  CQ+CRF KCL  GM
Sbjct:   63 CHICSDTANDHIHYGAIACXSCRAFFRRAVICNAEYHCSRDKTCFITKETRKHCQFCRFNKCLEAGM 129          
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000010267 (supercontig:LSalAtl2s:LSalAtl2s680:110406:112508:1 gene:EMLSAG00000010267 transcript:EMLSAT00000010267 description:"maker-LSalAtl2s680-augustus-gene-1.19")

HSP 1 Score: 67.781 bits (164), Expect = 3.228e-12
Identity = 41/114 (35.96%), Postives = 55/114 (48.25%), Query Frame = 0
Query:  194 ICMICEDKATG-LHYGIITCEGCKGFFKRTVQN---KRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEIS 303
            +C IC + A   ++YG   C  C+ FF+R+VQN   K+   C     C IN   R  CQ CRFQKC+  GM ++ V  DR    + S    N  K     + N   G T  E+S
Sbjct:  106 LCQICGEVAGKHVYYGGQCCTSCRAFFRRSVQNNSYKQFICCSQTKDCIINLKTRKACQLCRFQKCVSAGMRVSWVFPDRERRSKKSAMTLNNNKPPL-PSFNDPEGLTSIEVS 218          
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|75025546|sp|Q9U2R6.2|NHR91_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-91)

HSP 1 Score: 248.825 bits (634), Expect = 1.335e-74
Identity = 150/408 (36.76%), Postives = 222/408 (54.41%), Query Frame = 0
Query:  192 SLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKN--IGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQ-AIHGSTRMGTIRTDGEKAEL-HQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVE-NSDSTSPSLV-----PIYNRYLKCLRAYATQHHPLEPDRVDKL---LVRLPEVRVAAALLLESKMFYVPFLL 586
            S +C +C DK+TGLHYG  TCEGCKGFFKR+VQNK++Y+C  D  CEI+K  RNRCQ CRF+KC+ KGM+  AVREDRMPGGRN  ++Y+ YK                              Q  +I+R        +  Q +  F +  + K      +LI  L+  D  + +  LK   I    N + +   ++L +IGD IV +LV+WT+ LPF+ ELPV+ HT LLT +W EL++L+   Y  ++       T     E  E+       NL  LQ  L+ ++GK I ++ + ++ G +V + T ++  F   K+  E YVC+K I ++  ++DST    +      + + ++K L+ +   H P E  +   L   L  LP++R A+++LL SKMFYVPFLL
Sbjct:   97 SKLCSVCGDKSTGLHYGAATCEGCKGFFKRSVQNKKVYHCSQDNCCEIDKQNRNRCQSCRFRKCISKGMLTEAVREDRMPGGRNGNSIYSNYK------------------------------QRRSIIRKT---KDYVEEQERRPFQSLPSGK------KLIKELVEMDCLDRLINLKGLRINPSANCDIAPACKRLTRIGDEIVEQLVEWTKTLPFFDELPVEAHTHLLTQRWAELVLLSAGYYACSVFTPDSPDTTEMIDETDEISFTNPQVNLRLLQNRLSLVLGKEIPLEHVAKEAGPLVTRFTTLLHSFSNLKVSPEAYVCIKAITLLHLSADSTLDRSIIDKVNTLQDHFVKTLQIHL--HQPGEDAQTTSLAQILDWLPDLRNASSVLLHSKMFYVPFLL 463          
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|68056708|sp|Q9W539.4|HR4_DROME (RecName: Full=Hormone receptor 4; Short=dHR4; AltName: Full=Nuclear receptor subfamily 6 group A member 2)

HSP 1 Score: 254.218 bits (648), Expect = 1.062e-71
Identity = 141/310 (45.48%), Postives = 196/310 (63.23%), Query Frame = 0
Query:  316 NINILRAALTGNSQISTQYKHLFVNRDAEKN---SFDH-MQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHG-------------------STRMGTIRTDG----------EKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPD-RVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSIV 591
            N  IL+ ALT  S+I      L     + K+   S++H + +I  LI CD  EDIATL +  E L ++ S++ +KLC IGDSIV+KLV WT++LPFY E+PV++HTKLLT KWHE+L+LTT+AYQA+HG                   ST  GT  +            +  E   EV+++L TLQTCLT++MG+PI M+QL+ DVG+MV+K+T++  +FR+ KLKMEEYVCLKV  ++         L  I  RY++ LR+Y     P  P  R+ +LL  +PE++ AA+LLLESKMFYVPF+LNS+ +
Sbjct: 1213 NGTILKTALTNPSEIVHLRHRLDSAVSSSKDRQISYEHALGMIQTLIDCDAMEDIATLPHFSEFL-EDKSEISEKLCNIGDSIVHKLVSWTKKLPFYLEIPVEIHTKLLTDKWHEILILTTAAYQALHGKRRGEGGGSRHGSPASTPLSTPTGTPLSTPIPSPAQPLHKDDPEFVSEVNSHLSTLQTCLTTLMGQPIAMEQLKLDVGHMVDKMTQITIMFRRIKLKMEEYVCLKVYILLNKEV----ELESIQERYVQVLRSYLQNSSPQNPQARLSELLSHIPEIQAAASLLLESKMFYVPFVLNSASI 1517          

HSP 2 Score: 203.756 bits (517), Expect = 1.746e-54
Identity = 93/154 (60.39%), Postives = 107/154 (69.48%), Query Frame = 0
Query:  156 INMEKLWDGDRTQLPAN---AKKLTEGTTQEGDDHI------------------------EEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNM 282
            +NME+LW GD +QLP     A  L+    Q G  +                         +E+ L+CMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+
Sbjct:  855 LNMERLWAGDYSQLPPGQLQALNLSAQQQQWGSSNSTGLGGVGGGMGGRNLEAPHEPTDEDEQPLVCMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGTCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNL 1008          
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|148886998|sp|P70033.2|NR6A1_XENLA (RecName: Full=Nuclear receptor subfamily 6 group A member 1; AltName: Full=Germ cell nuclear factor; Short=GCNF; Short=xGCNF)

HSP 1 Score: 205.682 bits (522), Expect = 8.101e-59
Identity = 137/448 (30.58%), Postives = 214/448 (47.77%), Query Frame = 0
Query:  185 DDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNS--GAVY--------NMYKVKYKKNKNKSSGKTGGEI------STKETHQFDMPCQNINILRAALTGNSQISTQY------------KHLFVNR------DAEKNSFDHMQ--LINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLT--TSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSD----STSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590
            DD +++ +  C+IC D+ATGLHYGII+CEGCKGFFKR++ NKR+Y C  D +C +++ QRNRCQYCR  KCL  GM   A+RED MPGGRN   G V          M   ++++  N S    G         +  E++Q        +     L G S +  QY             HLF          A+  S D     LIN L+  +D E + T   I +      S+L   LC++ D ++++ + W ++LPF+ +L +  +T LL+  W EL++L+  T+  + I G     T +    + ELH                         +  +D   ++E++  +   F Q K+  EEYVC+K I  + N D    S++  +  +  RY    + +    +P +P+R   L++ LPEVR  A  L+   +  +P L  + +
Sbjct:    6 DDRVDQRA--CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISDEEVERIMSGQEFEEEANTSWSNNGDSDHSSPGNAVSESNQPSPVSTPSSSRSMELNGFSSLRDQYLGTPGPTHYQYLPHLFSFSAHPTIIPAQSRSLDPQSHTLINQLLTAEDIEPLNTPMLIEDGYKVTQSELFALLCRLADELLFRQITWVKKLPFFCDLSIKDYTCLLSTTWQELILLSSITTYSKQIFGDLTDVTSKYSPSEDELH-------------------------RFSEDGMEVMERLIYLFRKFSQLKVSNEEYVCMKAINFL-NQDIQGISSASQVEQLNKRYWYVCQDFTEYRYPHQPNRFPDLMMCLPEVRYIAGKLVNVPLEQLPLLFKAFL 425          
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|82198466|sp|Q66JK1.1|NR6A1_XENTR (RecName: Full=Nuclear receptor subfamily 6 group A member 1; AltName: Full=Germ cell nuclear factor; Short=GCNF)

HSP 1 Score: 202.216 bits (513), Expect = 1.792e-57
Identity = 135/448 (30.13%), Postives = 211/448 (47.10%), Query Frame = 0
Query:  185 DDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNS--GAVY--------NMYKVKYKKNKNKSSGKTGGEI------STKETHQFDMPCQNINILRAALTGNSQISTQY------------KHLFVNR------DAEKNSFDHMQ--LINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLT--TSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSD----STSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590
            DD +++ +  C+IC D+ATGLHYGII+CEGCKGFFKR++ NKR+Y C  D +C +++ QRNRCQYCR  KCL  GM   A+RED MPGGRN   G V          M   ++++  N S    G            E++Q        +     L G   +  QY             HLF           +  S D     LIN L+  +D E ++T   I +      S+L   LC++ D ++++ + W ++LPF+ +L +  +T LL+  W EL++L+  T+  + I G     T +    + ELH                         +  +D   ++E++  +   F Q K+  EEYVC+K I  + N D    S+   +  +  RY    + +    +P +P+R   L++ LPEVR  A  L+   +  +P L  + +
Sbjct:    6 DDRVDQRA--CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISDEEIERIMSGQEFEEEANTSWSNNGDSDHSSPGNGVSESNQPSPVSTPSSSRSMELNGFGSLRDQYLGTPGPMHYQYLPHLFSYSAHPTLIPTQSRSLDPQSHTLINQLLTAEDIEPLSTPMLIEDGYKVTQSELFALLCRLADELLFRQITWVKKLPFFCDLSIKDYTCLLSTTWQELILLSSLTTYSKQIFGDLADVTSKYSPSEDELH-------------------------RFSEDGMEVMERLIYLFRKFSQLKVSNEEYVCMKAINFL-NQDIQGISSVSQVEQLNKRYWYVCQDFTEYRYPHQPNRFPDLMMCLPEVRYIAGKLVNVPLEQLPLLFKAFL 425          
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|150383440|sp|Q9PU65.2|GCNFA_DANRE (RecName: Full=Nuclear receptor subfamily 6 group A member 1-A; AltName: Full=Germ cell nuclear factor A; Short=GCNF-A; Short=zfGCNF)

HSP 1 Score: 197.978 bits (502), Expect = 1.502e-55
Identity = 133/450 (29.56%), Postives = 210/450 (46.67%), Query Frame = 0
Query:  181 TQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRN-----------------SGAVY----NMYKVKYKKNKNK---------SSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYK---HLFVNRDAEKNSFDHMQ-LINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTT-SAYQA-IHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSD----STSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590
             +E   H + E   C+IC D+ATGLHYGII+CEGCKGFFKR++ NKR+Y C  D +CE+++ QRNRCQYCR  KCL  GM   A+RED MPGGRN                 SG  +    NM +  +  N +          S G     +ST  +++          LR    GN+ ++  Y+   HLF      ++ +     LI  L+  +D   + T   I +       +L   LC++ D ++++ + W ++LPF+ +L ++ +T+LL+  W EL++L   + Y A + G     T +      ELH                            +D   ++EK+  +   F Q K+  EEY C+K I  + N D    +    L  +  RY    + Y    +P +P R  ++++ LPE+R  A  L+   +  +P L  + +
Sbjct:   29 AEENGIHDQAEQRSCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCEMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISDEEIERIMSGQEFKDEANMPEHTWGNNGDSDHSSPGNGVSDGNQPSPVSTLSSNRSVELNGYTTALREQYIGNA-MAQHYQFLPHLFGYAAQPRSLYPQSHTLIGQLVAAEDLAPLGTPMLIEDGYRVTQVELFALLCRLADELLFRQISWIKKLPFFCDLSIEDYTRLLSATWQELILLACLTVYSAQVLGDLANVTHKYTPSDDELH-------------------------SFSEDGMEVMEKLIYLFRKFHQLKVSNEEYACMKAINFL-NQDIRGLTNVTQLEQLNKRYWYVCQDYTEYKYPHQPKRFPEIMMCLPEIRCIAGKLVNIPLEQLPLLFKAVL 451          
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|12643728|sp|Q15406.2|NR6A1_HUMAN (RecName: Full=Nuclear receptor subfamily 6 group A member 1; AltName: Full=Germ cell nuclear factor; Short=GCNF; Short=hGCNF; AltName: Full=Retinoid receptor-related testis-specific receptor; Short=RTR; Short=hRTR)

HSP 1 Score: 191.815 bits (486), Expect = 3.299e-53
Identity = 132/456 (28.95%), Postives = 208/456 (45.61%), Query Frame = 0
Query:  175 KLTEGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRN-----------------SGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAA-LTGNSQISTQY------------KHLF--------VNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLT--TSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSD----STSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLL 586
            +L  GT    DD  E+ +  C+IC D+ATGLHYGII+CEGCKGFFKR++ NKR+Y C  D +C +++ QRNRCQYCR  KCL  GM   A+RED MPGGRN                 SG  +      +  + +      G   S  E++Q   P   ++  R+  L G      QY             HLF        + + A         LI+ L+  +D E + T   I +      ++L   LC++ D ++++ + W ++LPF+ EL +  +T LL+  W EL++L+  T   + I G     T +      ELH+     +                          ++E++  +   F Q K+  EEY C+K I  + N D    +++  L  +  RY    + +    +  +P+R   L++ LPE+R  A  ++   +  +P L 
Sbjct:   42 ELDPGTISVSDDRAEQRT--CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISEEEIERIMSGQEFEEEANHWSNHGDSDHSSPGNRAS--ESNQ-PSPGSTLSSSRSVELNGFMAFREQYMGMSVPPHYQYIPHLFSYSGHSPLLPQQARSLDPQSYSLIHQLLSAEDLEPLGTPMLIEDGYAVTQAELFALLCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLSSLTVYSKQIFGELADVTAKYSPSDEELHRFSDEGM-------------------------EVIERLIYLYHKFHQLKVSNEEYACMKAINFL-NQDIRGLTSASQLEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYIAGKMVNVPLEQLPLLF 466          
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|82225956|sp|Q4V8R7.1|GCNFB_DANRE (RecName: Full=Nuclear receptor subfamily 6 group A member 1-B; AltName: Full=Germ cell nuclear factor B; Short=GCNF-B)

HSP 1 Score: 191.045 bits (484), Expect = 4.583e-53
Identity = 132/436 (30.28%), Postives = 207/436 (47.48%), Query Frame = 0
Query:  183 EGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNS--GAVYNMYKVKYKKNKNKSSG---KTGGEISTKETHQFDMPCQNINILRAA------------LTGNSQISTQYKHLFV----NRDAEKNSFDHMQ---LINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDST----SPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590
            E DD  E     C+IC D+A+GLHYGII+CEGCKGFFKR++ NKRIY C  D +C++++ QRNRCQYCR QKCL  GM   A+RED MPGGRN   G V+    +  ++ +   SG   K G ++S   +H +       N L                  +  IS Q  H F+           S    Q   L   ++  +D   + T   I +  +   S+L   LC I D ++++ + W +RLPF+ +L +   T+LL   WH+L++L++     +H +  +      GE A +    + +  TLQ              +  +D   ++E +  +   F Q  +  EEY CLK I ++ N ++T    +  L  +  RY    R    + HP  P R   ++  L E+R  +  ++   +  +P L  + +
Sbjct:   32 ETDDGGER---WCLICGDRASGLHYGIISCEGCKGFFKRSICNKRIYRCNRDKNCQMSRKQRNRCQYCRLQKCLQMGMNRKAIREDGMPGGRNKMIGPVH----ISLEEIERLMSGQEFKEGSDLSDSWSHGYSNHSSPGNSLSEGGQSLSFSSSRSVSCRDECISPQLTHTFLMCKYPLPPPTGSILKTQTHTLTGQILADEDLTPLTTPMLIEDGYSVTQSELLALLCGIADELLFRQIVWLKRLPFFTDLSIKDCTRLLGSSWHQLILLSSI---TVHSAQIL------GELANVTHHYTPSSHTLQ--------------RFGEDAMEVMESLNFLFRKFHQLNISNEEYSCLKTITLL-NQETTGLCNTSMLKQLSERYWTLCRELTERLHPQRPKRFSDIITCLTEIRHTSGKMMSIPLEQLPLLFKAVL 436          
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|160419011|sp|A0P8Z4.2|NR6A1_PIG (RecName: Full=Nuclear receptor subfamily 6 group A member 1; AltName: Full=Germ cell nuclear factor; Short=GCNF)

HSP 1 Score: 190.66 bits (483), Expect = 9.936e-53
Identity = 131/458 (28.60%), Postives = 206/458 (44.98%), Query Frame = 0
Query:  175 KLTEGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRN-----------------SGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQY------------KHLFV-----------NRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLT--TSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSD----STSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLL 586
            +L   T    DD  E+ +  C+IC D+ATGLHYGII+CEGCKGFFKR++ NKR+Y C  D +C +++ QRNRCQYCR  KCL  GM   A+RED MPGGRN                 SG  +      +  + +      G   S  E++Q   P   ++     L G      QY             HLF             R  +  S+    LI+ L+  +D E + T   I +      ++L   LC++ D ++++ + W ++LPF+ EL +  +T LL+  W EL++L+  T   + I G     T +      ELH+     +                          ++E++  +   F Q K+  EEY C+K I  + N D    +++  L  +  RY    + +    +  +P+R   L++ LPE+R  A  ++   +  +P L 
Sbjct:   42 ELDPSTISVPDDRAEQRT--CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISEEEIERIMSGQEFEEEANHWSNHGDSDHSSPGNRAS--ESNQ-PSPGSTLSSRSVELNGFMAFRDQYMGMSVPPHYQYIPHLFSYSAHSPLLPPQARSLDPQSYS---LIHQLVSAEDLEPLGTPMLIEDGYAVTQAELFALLCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLSSLTVYSKQIFGELADVTAKYSPSDEELHRFSDEGM-------------------------EVIERLIYLYHKFHQLKVSNEEYACMKAINFL-NQDIRGLTSASQLEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYIAGKMVNVPLEQLPLLF 465          
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|10720144|sp|Q64249.1|NR6A1_MOUSE (RecName: Full=Nuclear receptor subfamily 6 group A member 1; AltName: Full=Germ cell nuclear factor; Short=GCNF; Short=mGCNF; AltName: Full=Retinoid receptor-related testis-specific receptor; Short=RTR)

HSP 1 Score: 187.963 bits (476), Expect = 1.162e-51
Identity = 130/446 (29.15%), Postives = 204/446 (45.74%), Query Frame = 0
Query:  185 DDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRN-----------------SGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAA-LTGNSQISTQY------------KHLFVNRD------AEKNSFD--HMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLT--TSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSD----STSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLL 586
            DD  E+ +  C+IC D+ATGLHYGII+CEGCKGFFKR++ NKR+Y C  D +C +++ QRNRCQYCR  KCL  GM   A+RED MPGGRN                 SG  +      +  + +      G   S  E++Q   P   ++  R+  L G      QY             HLF           +  S D     LI+ L+  +D E + T   I +      ++L   LC++ D ++++ + W ++LPF+ EL +  +T LL+  W EL++L+  T   + I G     T +      ELH+     +                          ++E++  +   F Q K+  EEY C+K I  + N D    +++  L  +  RY    + +    +  +P+R   L++ LPE+R  A  ++   +  +P L 
Sbjct:   67 DDRAEQRT--CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISEEEIERIMSGQEFEEEANHWSNHGDSDHSSPGNRAS--ESNQ-PSPGSTLSSSRSVELNGFMAFRDQYMGMSVPPHYQYIPHLFSYSGHSPLLPPQARSLDPQSYSLIHQLMSAEDLEPLGTPMLIEDGYAVTQAELFALLCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLSSLTVYSKQIFGELADVTAKYSPSDEELHRFSDEGM-------------------------EVIERLIYLYHKFHQLKVSNEEYACMKAINFL-NQDIRGLTSASQLEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYIAGKMVNVPLEQLPLLF 481          
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|55584048|sp|Q05192.3|FTF1B_DROME (RecName: Full=Nuclear hormone receptor FTZ-F1 beta; AltName: Full=Nuclear hormone receptor HR39; Short=dHR39; AltName: Full=Nuclear receptor subfamily 5 group B member 1)

HSP 1 Score: 167.548 bits (423), Expect = 9.248e-43
Identity = 124/440 (28.18%), Postives = 194/440 (44.09%), Query Frame = 0
Query:  195 CMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVY-----NMYKVKYKKNKNKSSGKTGGEISTKETHQ----------FDMPCQNINILRAALTGNSQISTQY-----------------------KHLFVNRDAEKNSFD-----------------------HMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIH--GSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPI---YNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVR 568
            C IC DK +G HYGI +CE CKGFFKRTVQN++ Y CV  G C+++ + R +C  CRF+KCL KGM L A+REDR  GGR++         +M       ++  ++       S ++ HQ            +PC        +L G S  S +                        +HL+   DAE    +                       H QL N L+        A L + GE  N    DL   LC + D  +YK+V+W + LP +  + +D    LL + W ELL+ +   +++I   G  +M    + G K  L Q  S     LQTC+  M+              N+ + + R+       ++   EYV +KVI ++++  +     V +     + L+ L+AY   H+P  P +  +LL+R+P+++
Sbjct:  376 CPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSMLSPLLSPDQAAAAAAAAAVASQQQPHQRLHQLNGFGGVPIPCSTSLPASPSLAGTSVKSEEMAETGKQSLRTGSVPPLLQEIMDVEHLWQYTDAELARINQPLSAFASGSSSSSSSSGTSSGAHAQLTNPLLAS------AGLSSNGENAN---PDLIAHLCNVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSC-CFRSIDTPGEIKM----SQGRKITLSQAKSNG---LQTCIERML--------------NLTDHLRRL-------RVDRYEYVAMKVIVLLQSDTTELQEAVKVRECQEKALQSLQAYTLAHYPDTPSKFGELLLRIPDLQ 777          
BLAST of orphan nuclear receptor vs. nr
Match: gi|657600392|gb|AID52857.1| (hormone receptor 4 [Tigriopus japonicus])

HSP 1 Score: 734.176 bits (1894), Expect = 0.000e+0
Identity = 373/505 (73.86%), Postives = 414/505 (81.98%), Query Frame = 0
Query:   99 HHRLSEQAQ---KISSAVDGMLSLQSANTVARV------SSSGSSMEKVFPVCPRSEGSSYTRGIPINMEKLWDGDRTQLPANAKKLTEGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKT----GGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590
            HH +    Q   K+S+AVDG+LSLQS   + R       S+S +S+ +   V P     SY RG+PINMEKLW+GD++QLP      +E T  +     E+E LICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVA+G CEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYN+YKVKYKK+K  S G++       I+  E  QF+   QNINILRAALTGN +IS+ YK +        N  +++ LIN LI CD+FED+ATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLV+WTRRLPFY ELPVD+HTKLLTHKWHELLVLTTSAYQAIHGS RMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKIT+VIALFRQCKLKMEEYVCLKVIAMV  +D+ SPSLV I+NRYL CL+A+A QHHP EP+RV+ LLVRLPEVRVAA LLLESKMFYVPFLLNSSI
Sbjct:  160 HHDMGSNEQHALKMSNAVDGLLSLQSGGPLTRFPQEMPQSTSQTSITEEIRVNP----PSYARGLPINMEKLWEGDKSQLPTQTTAKSEETDGKVGLAEEDEPLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVAEGSCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNLYKVKYKKHKKSSPGRSEMYGSKPINDLEVAQFNSHSQNINILRAALTGNVEISSHYKSILGRCQNHVNDQENINLINELIACDEFEDMATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVEWTRRLPFYKELPVDIHTKLLTHKWHELLVLTTSAYQAIHGSRRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITKVIALFRQCKLKMEEYVCLKVIAMVATADNPSPSLVTIHNRYLACLKAFAQQHHPQEPNRVENLLVRLPEVRVAAGLLLESKMFYVPFLLNSSI 660          
BLAST of orphan nuclear receptor vs. nr
Match: gi|242009214|ref|XP_002425386.1| (orphan nuclear receptor nr6a1, putative [Pediculus humanus corporis] >gi|212509180|gb|EEB12648.1| orphan nuclear receptor nr6a1, putative [Pediculus humanus corporis])

HSP 1 Score: 538.11 bits (1385), Expect = 2.508e-180
Identity = 268/468 (57.26%), Postives = 336/468 (71.79%), Query Frame = 0
Query:  155 PINMEKLWDGDRTQLPANAKKLT----------------EGTTQEG----DDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNK------SSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590
            P+NME+LW GD TQLP + +                   +G T  G    D   +E+ +ICMICED+ATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG+CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKV  ++  NK      ++ + G +  +  + +  +P   +N  IL+ ALT  S++    + L      +RD        + +I  L+ CD+F+DIATL+N+ +LL+   SDL +KLCQIGDSIVYKLVQWT+RLPFY ELPV+VHT+LLTHKWHELLVLTTSAYQAIHG  ++ +  T G++A+  QEVS NLVTLQTCLTSMMG+PITMDQLRQDVG MVEKIT V  +FR+ KL+MEEYVCLKVI M+      S  L  I +RY+ CL+++     P +P R  +LL+RLPE++ AA+LLLESKMFYVPFLLNS+I
Sbjct:  310 PLNMERLWAGDLTQLPVSQQNQALNLALPPGDWPRDGRPQGITIIGEPKHDPEDDEQPMICMICEDRATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGNCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVLMRERDNKFLNVIFNNNEKGNQQKSSISSEQTLPSHIVNGTILKTALTNPSEVVHLRQRLDNTVSSSRDRTFPLDTILNMIQALVDCDEFQDIATLRNLEDLLDHK-SDLSEKLCQIGDSIVYKLVQWTKRLPFYLELPVEVHTRLLTHKWHELLVLTTSAYQAIHGVHKLSSTSTAGQEADFTQEVSNNLVTLQTCLTSMMGRPITMDQLRQDVGLMVEKITHVTLMFRRVKLRMEEYVCLKVITMLNQGRGGSNELEAIQDRYMMCLKSFVEHSFPQQPARFHELLLRLPEIQSAASLLLESKMFYVPFLLNSAI 776          
BLAST of orphan nuclear receptor vs. nr
Match: gi|1325293207|ref|XP_023330232.1| (hormone receptor 4-like isoform X1 [Eurytemora affinis])

HSP 1 Score: 542.732 bits (1397), Expect = 5.507e-179
Identity = 277/483 (57.35%), Postives = 343/483 (71.01%), Query Frame = 0
Query:  156 INMEKLWDGDRTQLPANAKK----LTEGTTQEGDDHIEEES--LICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTG-------GEISTKETHQFDMP-------------------------------CQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMV-ENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSIVGS 593
            ++M +LW G+  QLPA A+         + + G+  ++E+   +ICMIC+DKATGLHYGIITCEGCKGFFKRTVQNKR+Y CVADG+CEINKAQRNRCQYCRFQKCL +GMVLAAVREDRMPGGRNSGAVYNMYKVKYKK K     + G         +   E  Q D P                                 +INIL+A LTG+ +   QY+     R  E+   D ++LI  LI CDDFEDI+T +++ +LL+ + ++L  +L +IGD+IV KLVQWTRRLPFY ++PV++HT LLT+KWHELLVLTTS+YQAI+GS RMGT R+DGE AELHQEV+TNLVTLQTCLTSMMG+PITMDQLRQDVGNMVEK+T+VI   R  +L +EEYVCLKV+AM+ E+       L  I++RY+ CL+ Y   + P +P+RV +LLV+LPEV+ AA LLL SKMFYVPFLLNS+I  S
Sbjct:  544 VDMAELWKGNLDQLPAQAQPSGSIFNRDSGEPGNRILDEDDQPMICMICDDKATGLHYGIITCEGCKGFFKRTVQNKRVYTCVADGNCEINKAQRNRCQYCRFQKCLERGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKQKKHPKPQMGQFNVMSKPSMKNIEFEQMDSPKSLLNLREEQKTASFQSTSLSSPSSPHPDTISPSINILKAVLTGSQEGLPQYRQFDRARRRERYE-DSLRLIQELIDCDDFEDISTFRDVNDLLDHSNAELSDRLSRIGDNIVVKLVQWTRRLPFYEDIPVNIHTSLLTNKWHELLVLTTSSYQAINGSRRMGTTRSDGETAELHQEVATNLVTLQTCLTSMMGRPITMDQLRQDVGNMVEKVTKVITSLRNFRLTIEEYVCLKVVAMLTEDGLVQHSELEEIHDRYMNCLKIYTEWNFPTQPNRVQELLVKLPEVQEAAGLLLASKMFYVPFLLNSTISSS 1025          
BLAST of orphan nuclear receptor vs. nr
Match: gi|1325293212|ref|XP_023330233.1| (hormone receptor 4-like isoform X2 [Eurytemora affinis])

HSP 1 Score: 541.576 bits (1394), Expect = 1.403e-178
Identity = 269/481 (55.93%), Postives = 341/481 (70.89%), Query Frame = 0
Query:  156 INMEKLWDGDRTQLPANAKK----LTEGTTQEGDDHIEEES--LICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNM----------------YKVKYK--------------------KNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMV-ENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSIVGS 593
            ++M +LW G+  QLPA A+         + + G+  ++E+   +ICMIC+DKATGLHYGIITCEGCKGFFKRTVQNKR+Y CVADG+CEINKAQRNRCQYCRFQKCL +GMVLAAVREDRMPGGRNSGAVYNM                + V  K                    + + K++      +S+  +   D    +INIL+A LTG+ +   QY+     R  E+   D ++LI  LI CDDFEDI+T +++ +LL+ + ++L  +L +IGD+IV KLVQWTRRLPFY ++PV++HT LLT+KWHELLVLTTS+YQAI+GS RMGT R+DGE AELHQEV+TNLVTLQTCLTSMMG+PITMDQLRQDVGNMVEK+T+VI   R  +L +EEYVCLKV+AM+ E+       L  I++RY+ CL+ Y   + P +P+RV +LLV+LPEV+ AA LLL SKMFYVPFLLNS+I  S
Sbjct:  544 VDMAELWKGNLDQLPAQAQPSGSIFNRDSGEPGNRILDEDDQPMICMICDDKATGLHYGIITCEGCKGFFKRTVQNKRVYTCVADGNCEINKAQRNRCQYCRFQKCLERGMVLAAVREDRMPGGRNSGAVYNMYKYKKQKKHPKPQMGQFNVMSKPSMKNIEFEQMDSPKSLLNLREEQKTASFQSTSLSSPSSPHPDTISPSINILKAVLTGSQEGLPQYRQFDRARRRERYE-DSLRLIQELIDCDDFEDISTFRDVNDLLDHSNAELSDRLSRIGDNIVVKLVQWTRRLPFYEDIPVNIHTSLLTNKWHELLVLTTSSYQAINGSRRMGTTRSDGETAELHQEVATNLVTLQTCLTSMMGRPITMDQLRQDVGNMVEKVTKVITSLRNFRLTIEEYVCLKVVAMLTEDGLVQHSELEEIHDRYMNCLKIYTEWNFPTQPNRVQELLVKLPEVQEAAGLLLASKMFYVPFLLNSTISSS 1023          
BLAST of orphan nuclear receptor vs. nr
Match: gi|939683917|ref|XP_014286562.1| (PREDICTED: hormone receptor 4 isoform X5 [Halyomorpha halys])

HSP 1 Score: 523.857 bits (1348), Expect = 1.648e-176
Identity = 277/478 (57.95%), Postives = 333/478 (69.67%), Query Frame = 0
Query:  146 EGSSYTRGI--------PINMEKLWDGDRTQLPANAKKLT------------EGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKV-------KYKKNKNKSSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590
            EGSS + G          +NME+LW GD +QLP  A++LT            +   QEGD   E++ +ICMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKV         +  + K     G  + + E     MP   +N  IL+ ALT  S++    + L      +RD   +    + +I  LI CD+F+DIATL+N+ +LL+   SDL  KL QIGDSIVYKLVQWT+RLPFY ELPV+VHTKLLTH WHELLVLTTSAYQAIHG+ R+ +  +DG +A   QEVS NL TLQTCLTSMMG+PITMDQLRQDVG MVEKIT V  +FR+ KL M+EYVCLKVI M+  S   +  L  +  RY+ CLR Y     P +P+R   LL+RLPEV+ AA+LLLESKMFYVPFLLNS+I
Sbjct:  168 EGSSISPGAVTGSASGRSLNMERLWAGDLSQLPG-AQQLTALNLSWAKPGLHQDKQQEGDIEEEDQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGVCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKHKKSVRNGQMKGQADKGKPLISPEPASH-MPPHLVNGTILKTALTNPSEVVHLRQRLDSAVSSSRDRALSVDTTLSVIQTLIDCDEFQDIATLRNLEDLLDHK-SDLSDKLMQIGDSIVYKLVQWTKRLPFYLELPVEVHTKLLTHTWHELLVLTTSAYQAIHGAHRLVSTGSDGTEANFTQEVSNNLCTLQTCLTSMMGRPITMDQLRQDVGLMVEKITYVTLMFRRIKLTMQEYVCLKVIIMLNPSRGDANELEAMQERYMTCLRTYVEHSFPNQPNRFHDLLLRLPEVQSAASLLLESKMFYVPFLLNSTI 642          
BLAST of orphan nuclear receptor vs. nr
Match: gi|939683920|ref|XP_014286563.1| (PREDICTED: hormone receptor 4 isoform X6 [Halyomorpha halys])

HSP 1 Score: 523.087 bits (1346), Expect = 2.235e-176
Identity = 277/478 (57.95%), Postives = 333/478 (69.67%), Query Frame = 0
Query:  146 EGSSYTRGI--------PINMEKLWDGDRTQLPANAKKLT------------EGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKV-------KYKKNKNKSSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590
            EGSS + G          +NME+LW GD +QLP  A++LT            +   QEGD   E++ +ICMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKV         +  + K     G  + + E     MP   +N  IL+ ALT  S++    + L      +RD   +    + +I  LI CD+F+DIATL+N+ +LL+   SDL  KL QIGDSIVYKLVQWT+RLPFY ELPV+VHTKLLTH WHELLVLTTSAYQAIHG+ R+ +  +DG +A   QEVS NL TLQTCLTSMMG+PITMDQLRQDVG MVEKIT V  +FR+ KL M+EYVCLKVI M+  S   +  L  +  RY+ CLR Y     P +P+R   LL+RLPEV+ AA+LLLESKMFYVPFLLNS+I
Sbjct:  161 EGSSISPGAVTGSASGRSLNMERLWAGDLSQLPG-AQQLTALNLSWAKPGLHQDKQQEGDIEEEDQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGVCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKHKKSVRNGQMKGQADKGKPLISPEPASH-MPPHLVNGTILKTALTNPSEVVHLRQRLDSAVSSSRDRALSVDTTLSVIQTLIDCDEFQDIATLRNLEDLLDHK-SDLSDKLMQIGDSIVYKLVQWTKRLPFYLELPVEVHTKLLTHTWHELLVLTTSAYQAIHGAHRLVSTGSDGTEANFTQEVSNNLCTLQTCLTSMMGRPITMDQLRQDVGLMVEKITYVTLMFRRIKLTMQEYVCLKVIIMLNPSRGDANELEAMQERYMTCLRTYVEHSFPNQPNRFHDLLLRLPEVQSAASLLLESKMFYVPFLLNSTI 635          
BLAST of orphan nuclear receptor vs. nr
Match: gi|939683914|ref|XP_014286561.1| (PREDICTED: hormone receptor 4 isoform X4 [Halyomorpha halys])

HSP 1 Score: 523.472 bits (1347), Expect = 3.363e-176
Identity = 277/478 (57.95%), Postives = 333/478 (69.67%), Query Frame = 0
Query:  146 EGSSYTRGI--------PINMEKLWDGDRTQLPANAKKLT------------EGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKV-------KYKKNKNKSSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590
            EGSS + G          +NME+LW GD +QLP  A++LT            +   QEGD   E++ +ICMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKV         +  + K     G  + + E     MP   +N  IL+ ALT  S++    + L      +RD   +    + +I  LI CD+F+DIATL+N+ +LL+   SDL  KL QIGDSIVYKLVQWT+RLPFY ELPV+VHTKLLTH WHELLVLTTSAYQAIHG+ R+ +  +DG +A   QEVS NL TLQTCLTSMMG+PITMDQLRQDVG MVEKIT V  +FR+ KL M+EYVCLKVI M+  S   +  L  +  RY+ CLR Y     P +P+R   LL+RLPEV+ AA+LLLESKMFYVPFLLNS+I
Sbjct:  181 EGSSISPGAVTGSASGRSLNMERLWAGDLSQLPG-AQQLTALNLSWAKPGLHQDKQQEGDIEEEDQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGVCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKHKKSVRNGQMKGQADKGKPLISPEPASH-MPPHLVNGTILKTALTNPSEVVHLRQRLDSAVSSSRDRALSVDTTLSVIQTLIDCDEFQDIATLRNLEDLLDHK-SDLSDKLMQIGDSIVYKLVQWTKRLPFYLELPVEVHTKLLTHTWHELLVLTTSAYQAIHGAHRLVSTGSDGTEANFTQEVSNNLCTLQTCLTSMMGRPITMDQLRQDVGLMVEKITYVTLMFRRIKLTMQEYVCLKVIIMLNPSRGDANELEAMQERYMTCLRTYVEHSFPNQPNRFHDLLLRLPEVQSAASLLLESKMFYVPFLLNSTI 655          
BLAST of orphan nuclear receptor vs. nr
Match: gi|939683912|ref|XP_014286560.1| (PREDICTED: hormone receptor 4 isoform X3 [Halyomorpha halys])

HSP 1 Score: 523.087 bits (1346), Expect = 4.452e-176
Identity = 277/478 (57.95%), Postives = 333/478 (69.67%), Query Frame = 0
Query:  146 EGSSYTRGI--------PINMEKLWDGDRTQLPANAKKLT------------EGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKV-------KYKKNKNKSSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590
            EGSS + G          +NME+LW GD +QLP  A++LT            +   QEGD   E++ +ICMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKV         +  + K     G  + + E     MP   +N  IL+ ALT  S++    + L      +RD   +    + +I  LI CD+F+DIATL+N+ +LL+   SDL  KL QIGDSIVYKLVQWT+RLPFY ELPV+VHTKLLTH WHELLVLTTSAYQAIHG+ R+ +  +DG +A   QEVS NL TLQTCLTSMMG+PITMDQLRQDVG MVEKIT V  +FR+ KL M+EYVCLKVI M+  S   +  L  +  RY+ CLR Y     P +P+R   LL+RLPEV+ AA+LLLESKMFYVPFLLNS+I
Sbjct:  185 EGSSISPGAVTGSASGRSLNMERLWAGDLSQLPG-AQQLTALNLSWAKPGLHQDKQQEGDIEEEDQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGVCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKHKKSVRNGQMKGQADKGKPLISPEPASH-MPPHLVNGTILKTALTNPSEVVHLRQRLDSAVSSSRDRALSVDTTLSVIQTLIDCDEFQDIATLRNLEDLLDHK-SDLSDKLMQIGDSIVYKLVQWTKRLPFYLELPVEVHTKLLTHTWHELLVLTTSAYQAIHGAHRLVSTGSDGTEANFTQEVSNNLCTLQTCLTSMMGRPITMDQLRQDVGLMVEKITYVTLMFRRIKLTMQEYVCLKVIIMLNPSRGDANELEAMQERYMTCLRTYVEHSFPNQPNRFHDLLLRLPEVQSAASLLLESKMFYVPFLLNSTI 659          
BLAST of orphan nuclear receptor vs. nr
Match: gi|939683905|ref|XP_014286557.1| (PREDICTED: hormone receptor 4 isoform X1 [Halyomorpha halys])

HSP 1 Score: 523.472 bits (1347), Expect = 6.255e-176
Identity = 273/463 (58.96%), Postives = 328/463 (70.84%), Query Frame = 0
Query:  153 GIPINMEKLWDGDRTQLPANAKKLT------------EGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKV-------KYKKNKNKSSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590
            G  +NME+LW GD +QLP  A++LT            +   QEGD   E++ +ICMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKV         +  + K     G  + + E     MP   +N  IL+ ALT  S++    + L      +RD   +    + +I  LI CD+F+DIATL+N+ +LL+   SDL  KL QIGDSIVYKLVQWT+RLPFY ELPV+VHTKLLTH WHELLVLTTSAYQAIHG+ R+ +  +DG +A   QEVS NL TLQTCLTSMMG+PITMDQLRQDVG MVEKIT V  +FR+ KL M+EYVCLKVI M+  S   +  L  +  RY+ CLR Y     P +P+R   LL+RLPEV+ AA+LLLESKMFYVPFLLNS+I
Sbjct:  214 GRSLNMERLWAGDLSQLPG-AQQLTALNLSWAKPGLHQDKQQEGDIEEEDQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGVCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKHKKSVRNGQMKGQADKGKPLISPEPASH-MPPHLVNGTILKTALTNPSEVVHLRQRLDSAVSSSRDRALSVDTTLSVIQTLIDCDEFQDIATLRNLEDLLDHK-SDLSDKLMQIGDSIVYKLVQWTKRLPFYLELPVEVHTKLLTHTWHELLVLTTSAYQAIHGAHRLVSTGSDGTEANFTQEVSNNLCTLQTCLTSMMGRPITMDQLRQDVGLMVEKITYVTLMFRRIKLTMQEYVCLKVIIMLNPSRGDANELEAMQERYMTCLRTYVEHSFPNQPNRFHDLLLRLPEVQSAASLLLESKMFYVPFLLNSTI 673          
BLAST of orphan nuclear receptor vs. nr
Match: gi|939683908|ref|XP_014286558.1| (PREDICTED: hormone receptor 4 isoform X2 [Halyomorpha halys])

HSP 1 Score: 523.087 bits (1346), Expect = 7.625e-176
Identity = 277/478 (57.95%), Postives = 333/478 (69.67%), Query Frame = 0
Query:  146 EGSSYTRGI--------PINMEKLWDGDRTQLPANAKKLT------------EGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKV-------KYKKNKNKSSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590
            EGSS + G          +NME+LW GD +QLP  A++LT            +   QEGD   E++ +ICMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKV         +  + K     G  + + E     MP   +N  IL+ ALT  S++    + L      +RD   +    + +I  LI CD+F+DIATL+N+ +LL+   SDL  KL QIGDSIVYKLVQWT+RLPFY ELPV+VHTKLLTH WHELLVLTTSAYQAIHG+ R+ +  +DG +A   QEVS NL TLQTCLTSMMG+PITMDQLRQDVG MVEKIT V  +FR+ KL M+EYVCLKVI M+  S   +  L  +  RY+ CLR Y     P +P+R   LL+RLPEV+ AA+LLLESKMFYVPFLLNS+I
Sbjct:  194 EGSSISPGAVTGSASGRSLNMERLWAGDLSQLPG-AQQLTALNLSWAKPGLHQDKQQEGDIEEEDQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGVCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKHKKSVRNGQMKGQADKGKPLISPEPASH-MPPHLVNGTILKTALTNPSEVVHLRQRLDSAVSSSRDRALSVDTTLSVIQTLIDCDEFQDIATLRNLEDLLDHK-SDLSDKLMQIGDSIVYKLVQWTKRLPFYLELPVEVHTKLLTHTWHELLVLTTSAYQAIHGAHRLVSTGSDGTEANFTQEVSNNLCTLQTCLTSMMGRPITMDQLRQDVGLMVEKITYVTLMFRRIKLTMQEYVCLKVIIMLNPSRGDANELEAMQERYMTCLRTYVEHSFPNQPNRFHDLLLRLPEVQSAASLLLESKMFYVPFLLNSTI 668          
The following BLAST results are available for this feature:
BLAST of orphan nuclear receptor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25
Match NameE-valueIdentityDescription
EMLSAG000000007333.461e-2051.43supercontig:LSalAtl2s:LSalAtl2s1117:84476:96586:1 ... [more]
EMLSAG000000099408.765e-2044.05supercontig:LSalAtl2s:LSalAtl2s649:353131:422335:-... [more]
EMLSAG000000078941.724e-1939.81supercontig:LSalAtl2s:LSalAtl2s466:351370:353021:1... [more]
EMLSAG000000077415.124e-1945.68supercontig:LSalAtl2s:LSalAtl2s450:172104:174744:-... [more]
EMLSAG000000050902.461e-1843.42supercontig:LSalAtl2s:LSalAtl2s269:306853:308464:-... [more]
EMLSAG000000056193.791e-1635.64supercontig:LSalAtl2s:LSalAtl2s301:354064:356113:1... [more]
EMLSAG000000126519.715e-1533.33supercontig:LSalAtl2s:LSalAtl2s959:3535:5114:-1 ge... [more]
EMLSAG000000056201.872e-1443.04supercontig:LSalAtl2s:LSalAtl2s301:514440:538934:1... [more]
EMLSAG000000082611.147e-1347.76supercontig:LSalAtl2s:LSalAtl2s49:858199:860758:1 ... [more]
EMLSAG000000102673.228e-1235.96supercontig:LSalAtl2s:LSalAtl2s680:110406:112508:1... [more]

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BLAST of orphan nuclear receptor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|75025546|sp|Q9U2R6.2|NHR91_CAEEL1.335e-7436.76RecName: Full=Nuclear hormone receptor family memb... [more]
gi|68056708|sp|Q9W539.4|HR4_DROME1.062e-7145.48RecName: Full=Hormone receptor 4; Short=dHR4; AltN... [more]
gi|148886998|sp|P70033.2|NR6A1_XENLA8.101e-5930.58RecName: Full=Nuclear receptor subfamily 6 group A... [more]
gi|82198466|sp|Q66JK1.1|NR6A1_XENTR1.792e-5730.13RecName: Full=Nuclear receptor subfamily 6 group A... [more]
gi|150383440|sp|Q9PU65.2|GCNFA_DANRE1.502e-5529.56RecName: Full=Nuclear receptor subfamily 6 group A... [more]
gi|12643728|sp|Q15406.2|NR6A1_HUMAN3.299e-5328.95RecName: Full=Nuclear receptor subfamily 6 group A... [more]
gi|82225956|sp|Q4V8R7.1|GCNFB_DANRE4.583e-5330.28RecName: Full=Nuclear receptor subfamily 6 group A... [more]
gi|160419011|sp|A0P8Z4.2|NR6A1_PIG9.936e-5328.60RecName: Full=Nuclear receptor subfamily 6 group A... [more]
gi|10720144|sp|Q64249.1|NR6A1_MOUSE1.162e-5129.15RecName: Full=Nuclear receptor subfamily 6 group A... [more]
gi|55584048|sp|Q05192.3|FTF1B_DROME9.248e-4328.18RecName: Full=Nuclear hormone receptor FTZ-F1 beta... [more]

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BLAST of orphan nuclear receptor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|657600392|gb|AID52857.1|0.000e+073.86hormone receptor 4 [Tigriopus japonicus][more]
gi|242009214|ref|XP_002425386.1|2.508e-18057.26orphan nuclear receptor nr6a1, putative [Pediculus... [more]
gi|1325293207|ref|XP_023330232.1|5.507e-17957.35hormone receptor 4-like isoform X1 [Eurytemora aff... [more]
gi|1325293212|ref|XP_023330233.1|1.403e-17855.93hormone receptor 4-like isoform X2 [Eurytemora aff... [more]
gi|939683917|ref|XP_014286562.1|1.648e-17657.95PREDICTED: hormone receptor 4 isoform X5 [Halyomor... [more]
gi|939683920|ref|XP_014286563.1|2.235e-17657.95PREDICTED: hormone receptor 4 isoform X6 [Halyomor... [more]
gi|939683914|ref|XP_014286561.1|3.363e-17657.95PREDICTED: hormone receptor 4 isoform X4 [Halyomor... [more]
gi|939683912|ref|XP_014286560.1|4.452e-17657.95PREDICTED: hormone receptor 4 isoform X3 [Halyomor... [more]
gi|939683905|ref|XP_014286557.1|6.255e-17658.96PREDICTED: hormone receptor 4 isoform X1 [Halyomor... [more]
gi|939683908|ref|XP_014286558.1|7.625e-17657.95PREDICTED: hormone receptor 4 isoform X2 [Halyomor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold491_size156641supercontigscaffold491_size156641:8337..11777 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteF:binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold491_size156641-snap-gene-0.24-mRNA-1maker-scaffold491_size156641-snap-gene-0.24-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold491_size156641:8337..11777+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold491_size156641-snap-gene-0.24 ID=maker-scaffold491_size156641-snap-gene-0.24|Name=orphan nuclear receptor|organism=Tigriopus kingsejongensis|type=gene|length=3441bp|location=Sequence derived from alignment at scaffold491_size156641:8337..11777+ (Tigriopus kingsejongensis)
GTGACACGAACGAAGGGACGTATGATGCCGACCTGCAGCATAATTCCGTG AGCAACAGTCTGAGCGTGAGTTCCTCGTTCATGGGCGTGTCGCCCATGTC CGAGAAACCGCCGTCCATCCACGAAAGCAGTCTCATAACCAAAGACCATC ATCACCACCACCACCATCATCGGAACACCTTGAAATGGGCCAAGAACTGC AATCTGGCCGTGTCCACATCACTCCCAACCTCGGTCCCTGCGCCAGAATC TCCTCCCAAGTACATGGTTTCCCCACTCTATCCCAACTCCATGGTGGTTA GACAGGACGAACATCACTATGAGGAGCACCATAGGCTCTCCGAGCAGGCC CAGAAGATCTCTTCGGCTGTGGATGGAATGCTTAGTTTGCAGTCCGCGAA TACCGTCGCCCGCGTCTCGTCCTCGGGGTCGTCGATGGAAAAAGTATTCC CCGTGTGTCCCAGATCCGAGGGCTCGTCCTACACCCGGGGCATTCCCATC AACATGGAAAAGCTATGGGACGGAGATCGGACCCAACTCCCAGCCAACGC CAAGAAACTGACTGAGGTAACAATCCCGGGCCATGGCCCTCTCGAGACCC GTGGGCTGTGATGGCCCAGTCTGATCTGTGTATAAACCGTGGATCTTTTT GTGAATACAGGGAACAACGCAGGAGGGTGACGACCATATTGAGGAGGAAT CACTGATATGCATGATTTGCGAAGACAAAGCGACTGGTCTTCATTATGGA ATCATAACGTGTGAAGGGTGAGTGGATTTGTATGCGGGCTATTTCTGCCA TTTACTCCATCGGGTGCCCAACCCCCTAAGTTAGCTTGTCCATGAAGTAA GGAGCGAAAACGAATTGATCCCATAGTGAGTTGAAAAGTTGGGGTCTGAC TGAAATTAATGGAGGGAATCGACCGGAATGAATCTTAGCTAGAGTGTCCT TGGGGTTGATATCTCTCTTTTTTGGCCCGGCTGATCTGAGCTGGCCGATA GCAGTCCTATGTGCCAAGTGAACTGATTTGTGTTATTTTTCTTTCATGCT TAAAGATGCAAGGGATTTTTCAAGAGAACTGTCCAGAACAAACGCATCTA TAATTGTGTGGCCGATGGGCATTGTGAAATCAACAAAGCGCAAAGGAATC GATGCCAATATTGTCGGTTTCAAAAGTGTCTTCATAAGGGAATGGTTCTT GCAGGTAATTGCCTATCTCACTGGCAACCCAATGTCGGCCCAATCAATGC TGGTTCCATTTCTAGCTGTTCGTGAAGACCGAATGCCTGGTGGTCGAAAT TCGGGGGCTGTCTACAACATGTATAAGGTGAGTGTACGAAAGCCGGTCGG TCACCTTATGCCCCCCCCCCTGCAGGCCATAATGTGGGTGATTCCATTCC AGGTCAAGTACAAAAAGAATAAGAACAAATCATCCGGGAAGACAGGGGGC GAGATTTCCACCAAGGAGACGCATCAGTTTGACATGCCCTGTCAAAATAT AAACATACTTCGAGCTGCGTTAACTGGAAACTCTCAGGTAACGATTCCTA GCGTCAGGAGGATTGAATGGTTTGCACACCAAGTGTCTGCACCATGCTCC GGTTTTGAGATTGGGCTAGCTTTTGATCACGTCGCTTTTCTCTGCAGATT TCCACACAATATAAACACTTATTTGTCAATCGAGATGCCGAAAAGAATTC CTTTGATCACATGCAACTGATCAATAATCTCATTGTTTGCGATGACTTTG AAGACATTGCCACTTTGAAGGTGAGTGTGAATGGCAGCCCAAGTGTTCAT TGGAACACAGATGTGAAAGCGATGGATCTCCACGAGGGATTAGAGATGGT TTCGTCATGGGTTCGGTTCCTTTCTAGAACATCGGCGAACTTCTCAATCA AAACACATCTGACTTGCAACAGAAACTTTGTCAAATTGGAGATTCAATTG TGTACAAACTAGTACAGTGGACCAGGCGGCTGCCATTCTATCACGAGCTT CCGGTGGACGTGCACACAAAATTGCTAACTCACAAATGGCATGAACTACT GGTTCTGACCACGTCCGCGTATCAAGCAATACACGGGTCCACACGAATGG GCACAATTAGAACGGACGGGGAAAAGGCCGAGTTGCACCAGGAGGTAAGC CCTACGATTCTTCTTGTAGACCAGAATGGAGTGTTATCCCAGTTCCATGT TGTTTTATTTCACTCACGCTACCTTTCCATTGCTACCTCAGGTGTCGACG AATCTCGTGACTCTGCAAACCTGTCTGACGTCAATGATGGGCAAGCCAAT CACCATGGATCAACTGAGACAAGATGTCGGGAACATGGTGGAAAAAATCA CCCGAGTCATAGCCCTTTTCCGACAATGCAAGCTGAAAATGGAAGAATAT GTTTGTCTCAAAGTCATCGCAATGGTTGAAAATTCCGGTACGACCCCCCC TCCCCCTAGTCGCCATCACGATATCAAGTCTCACGCCCGTTTCTTCCCTC ACTTTACAGACAGTACTTCACCGTCCTTGGTGCCAATTTACAATAGATAC CTTAAGTGCCTCCGAGCCTATGCAACACAACACCATCCACTGGAGCCTGA TCGAGTGGACAAACTACTAGTCCGATTGCCTGAGGTACGTGTCCGGGGCC AGGGGGAGTAGTACGCAGGCATCATGATCTGACGGTTTCCATCGATTCTC TTGCAGGTTCGTGTGGCAGCCGCATTACTTTTAGAAAGTAAAATGTTTTA TGTGCCATTCTTACTTAATTCGTCCATTGTTGGTTCTTAGAGAGCAATCT GCGAGGGTGGGATTGGCTCGTCTGGGGACGACTTATTTATTGCTCTCAAC ATGTTAGTAGGTTTATAAGGTTTGCCAGTGTTTTTTACATTTTTGTATGT TGTTAATAATAAATTTCACTTCGCATCCTGCGGGAGACATTTTGAATGAG CCCTGTGTTGGTGCCTTTGTTTCATCTGTCTCACCCGCCGGCCTCGTCGT GGGTGAGTCGATGCAGTTGGAGCTTCGCCTCCTCGATGACTTCGGGGGGA AACTTGGCCAACTCCGCGACCTCCACGCCGAAACTTTGGGTAGCTCGGCC CGCCACAATCTGGTAGAGGAGGGTGAAGCTACCATCTTGCACGGCCGCGG CGCAGTTCATGTTGAAACAAGTCGGATGGCTCTGGTCGATGTCCGACAGC TCGTGAAAGTGGGTGGCGAACAAGGTCACGGCCCGGATCTGGCTCACGAT GTGCTCGCAAATGGCCCAAGCCAGCCCGAAGCCGTCTTGAGTCGAGGTGC CCCGACCCAGTTCGTCGATGAGCACGAGGCTCTTCTCGGTCGAGTGGTTG AGGATGGCCTTGATGTCGAGCATCTCCTTGAGGAAGGTGGACGAGCCGTC CACGAGCGAGTCGTCGGCCCCAATCCGGACCGAAATGGCGT
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Synonyms
The feature 'orphan nuclear receptor' has the following synonyms
Synonym
Tk05482
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