orphan nuclear receptor, maker-scaffold491_size156641-snap-gene-0.24 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000011907 (supercontig:LSalAtl2s:LSalAtl2s83:639505:641027:-1 gene:EMLSAG00000011907 transcript:EMLSAT00000011907 description:"maker-LSalAtl2s83-augustus-gene-6.22") HSP 1 Score: 65.855 bits (159), Expect = 1.146e-11 Identity = 41/119 (34.45%), Postives = 55/119 (46.22%), Query Frame = 0 Query: 171 ANAKKLTEGTTQEGDDHI--EEESL--ICMICEDKATG-LHYGIITCEGCKGFFKRTVQN---KRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYN 281 N +L T E I E+L +C IC + A ++YG C C+ FF+R+VQN K+ C C IN R CQ CRFQKC+ GM + V D + S + N Sbjct: 78 VNFNELNSATLSEPSSQIIIRREALPRLCQICGEVAGKHVYYGGQCCTSCRAFFRRSVQNNSYKQFSCCSKTEDCIINLQTRKSCQLCRFQKCISAGMRASWVLPDGERRSKKSAMILN 196
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000004174 (supercontig:LSalAtl2s:LSalAtl2s220:369739:371271:-1 gene:EMLSAG00000004174 transcript:EMLSAT00000004174 description:"augustus_masked-LSalAtl2s220-processed-gene-3.5") HSP 1 Score: 63.1586 bits (152), Expect = 1.057e-10 Identity = 35/87 (40.23%), Postives = 45/87 (51.72%), Query Frame = 0 Query: 194 ICMICEDKATGL-HYGIITCEGCKGFFKRTVQ--NKRIYNCV-----ADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAV--REDRM 270 +C IC D A HYG I C C+ FF RTV + + CV G C I KA R CQ+CR++ CL GM + V E+R+ Sbjct: 136 VCRICGDIAPPHNHYGAIACFSCRAFFGRTVHKGTQERFRCVRGNPDESGQCMITKATRTHCQFCRYRGCLSAGMXPSYVTTAEERL 222
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000003771 (supercontig:LSalAtl2s:LSalAtl2s2039:3647:12796:1 gene:EMLSAG00000003771 transcript:EMLSAT00000003771 description:"maker-LSalAtl2s2039-snap-gene-0.4") HSP 1 Score: 63.1586 bits (152), Expect = 1.249e-10 Identity = 27/57 (47.37%), Postives = 36/57 (63.16%), Query Frame = 0 Query: 216 KGFFKRTVQNKRIYN-CVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMP 271 +GFF+R++Q K Y C + C I + RNRCQYCR +KC+ GM AVR R+P Sbjct: 17 QGFFRRSIQQKIQYRPCTKNQQCNIQRINRNRCQYCRLKKCIASGMSRDAVRFGRVP 73
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000011488 (supercontig:LSalAtl2s:LSalAtl2s794:281844:292908:-1 gene:EMLSAG00000011488 transcript:EMLSAT00000011488 description:"maker-LSalAtl2s794-snap-gene-2.22") HSP 1 Score: 56.9954 bits (136), Expect = 5.153e-9 Identity = 56/230 (24.35%), Postives = 103/230 (44.78%), Query Frame = 0 Query: 229 YNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQ---NINIL-RAALTGN---SQISTQYKHLFVNRDAEK-------NSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRM 444 Y C +G+C I+ A+RN+CQ CRF+KCL M AV+++R P A + KNKSS IS++ + + N I+ LT N + ++++ +++ +N + K N+ H + + F T+ LL++N+ L +I +++ +V W + +P + E V+ LL W L +L T+ + + ++ Sbjct: 4 YVCKGNGNCTIDVARRNQCQSCRFKKCLMVKMKKEAVQQERTPRISCIKATQTT-SYTFSNLKNKSSK--ANPISSRRLYLLSTSFRESSNTEIIDDTYLTKNILSTVVNSKKENIVINIENNKKCIETILNAPSHKRTTPSF----QFYPSPTI----TLLSENS------LHEISVKLLFTVVHWAKSVPSFVEFSVNDQNVLLREAWSRLFILGTAQWAILINEEKL 216
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000007233 (supercontig:LSalAtl2s:LSalAtl2s405:178614:197434:1 gene:EMLSAG00000007233 transcript:EMLSAT00000007233 description:"maker-LSalAtl2s405-snap-gene-2.21") HSP 1 Score: 56.225 bits (134), Expect = 1.338e-8 Identity = 28/55 (50.91%), Postives = 35/55 (63.64%), Query Frame = 0 Query: 226 KRIYNCVAD-GHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAV 279 K IY C A G C I+KA RN+CQ CR +KCLH GM AV+ +R P RN+ + Sbjct: 60 KLIYRCQAGTGMCVIDKAHRNQCQACRLRKCLHMGMNKDAVQNERQP--RNTATL 112
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|75025546|sp|Q9U2R6.2|NHR91_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-91) HSP 1 Score: 248.825 bits (634), Expect = 1.335e-74 Identity = 150/408 (36.76%), Postives = 222/408 (54.41%), Query Frame = 0 Query: 192 SLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKN--IGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQ-AIHGSTRMGTIRTDGEKAEL-HQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVE-NSDSTSPSLV-----PIYNRYLKCLRAYATQHHPLEPDRVDKL---LVRLPEVRVAAALLLESKMFYVPFLL 586 S +C +C DK+TGLHYG TCEGCKGFFKR+VQNK++Y+C D CEI+K RNRCQ CRF+KC+ KGM+ AVREDRMPGGRN ++Y+ YK Q +I+R + Q + F + + K +LI L+ D + + LK I N + + ++L +IGD IV +LV+WT+ LPF+ ELPV+ HT LLT +W EL++L+ Y ++ T E E+ NL LQ L+ ++GK I ++ + ++ G +V + T ++ F K+ E YVC+K I ++ ++DST + + + ++K L+ + H P E + L L LP++R A+++LL SKMFYVPFLL Sbjct: 97 SKLCSVCGDKSTGLHYGAATCEGCKGFFKRSVQNKKVYHCSQDNCCEIDKQNRNRCQSCRFRKCISKGMLTEAVREDRMPGGRNGNSIYSNYK------------------------------QRRSIIRKT---KDYVEEQERRPFQSLPSGK------KLIKELVEMDCLDRLINLKGLRINPSANCDIAPACKRLTRIGDEIVEQLVEWTKTLPFFDELPVEAHTHLLTQRWAELVLLSAGYYACSVFTPDSPDTTEMIDETDEISFTNPQVNLRLLQNRLSLVLGKEIPLEHVAKEAGPLVTRFTTLLHSFSNLKVSPEAYVCIKAITLLHLSADSTLDRSIIDKVNTLQDHFVKTLQIHL--HQPGEDAQTTSLAQILDWLPDLRNASSVLLHSKMFYVPFLL 463
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|68056708|sp|Q9W539.4|HR4_DROME (RecName: Full=Hormone receptor 4; Short=dHR4; AltName: Full=Nuclear receptor subfamily 6 group A member 2) HSP 1 Score: 254.218 bits (648), Expect = 1.062e-71 Identity = 141/310 (45.48%), Postives = 196/310 (63.23%), Query Frame = 0 Query: 316 NINILRAALTGNSQISTQYKHLFVNRDAEKN---SFDH-MQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHG-------------------STRMGTIRTDG----------EKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPD-RVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSIV 591 N IL+ ALT S+I L + K+ S++H + +I LI CD EDIATL + E L ++ S++ +KLC IGDSIV+KLV WT++LPFY E+PV++HTKLLT KWHE+L+LTT+AYQA+HG ST GT + + E EV+++L TLQTCLT++MG+PI M+QL+ DVG+MV+K+T++ +FR+ KLKMEEYVCLKV ++ L I RY++ LR+Y P P R+ +LL +PE++ AA+LLLESKMFYVPF+LNS+ + Sbjct: 1213 NGTILKTALTNPSEIVHLRHRLDSAVSSSKDRQISYEHALGMIQTLIDCDAMEDIATLPHFSEFL-EDKSEISEKLCNIGDSIVHKLVSWTKKLPFYLEIPVEIHTKLLTDKWHEILILTTAAYQALHGKRRGEGGGSRHGSPASTPLSTPTGTPLSTPIPSPAQPLHKDDPEFVSEVNSHLSTLQTCLTTLMGQPIAMEQLKLDVGHMVDKMTQITIMFRRIKLKMEEYVCLKVYILLNKEV----ELESIQERYVQVLRSYLQNSSPQNPQARLSELLSHIPEIQAAASLLLESKMFYVPFVLNSASI 1517 HSP 2 Score: 203.756 bits (517), Expect = 1.746e-54 Identity = 93/154 (60.39%), Postives = 107/154 (69.48%), Query Frame = 0 Query: 156 INMEKLWDGDRTQLPAN---AKKLTEGTTQEGDDHI------------------------EEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNM 282 +NME+LW GD +QLP A L+ Q G + +E+ L+CMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+ Sbjct: 855 LNMERLWAGDYSQLPPGQLQALNLSAQQQQWGSSNSTGLGGVGGGMGGRNLEAPHEPTDEDEQPLVCMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGTCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNL 1008
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|148886998|sp|P70033.2|NR6A1_XENLA (RecName: Full=Nuclear receptor subfamily 6 group A member 1; AltName: Full=Germ cell nuclear factor; Short=GCNF; Short=xGCNF) HSP 1 Score: 205.682 bits (522), Expect = 8.101e-59 Identity = 137/448 (30.58%), Postives = 214/448 (47.77%), Query Frame = 0 Query: 185 DDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNS--GAVY--------NMYKVKYKKNKNKSSGKTGGEI------STKETHQFDMPCQNINILRAALTGNSQISTQY------------KHLFVNR------DAEKNSFDHMQ--LINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLT--TSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSD----STSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 DD +++ + C+IC D+ATGLHYGII+CEGCKGFFKR++ NKR+Y C D +C +++ QRNRCQYCR KCL GM A+RED MPGGRN G V M ++++ N S G + E++Q + L G S + QY HLF A+ S D LIN L+ +D E + T I + S+L LC++ D ++++ + W ++LPF+ +L + +T LL+ W EL++L+ T+ + I G T + + ELH + +D ++E++ + F Q K+ EEYVC+K I + N D S++ + + RY + + +P +P+R L++ LPEVR A L+ + +P L + + Sbjct: 6 DDRVDQRA--CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISDEEVERIMSGQEFEEEANTSWSNNGDSDHSSPGNAVSESNQPSPVSTPSSSRSMELNGFSSLRDQYLGTPGPTHYQYLPHLFSFSAHPTIIPAQSRSLDPQSHTLINQLLTAEDIEPLNTPMLIEDGYKVTQSELFALLCRLADELLFRQITWVKKLPFFCDLSIKDYTCLLSTTWQELILLSSITTYSKQIFGDLTDVTSKYSPSEDELH-------------------------RFSEDGMEVMERLIYLFRKFSQLKVSNEEYVCMKAINFL-NQDIQGISSASQVEQLNKRYWYVCQDFTEYRYPHQPNRFPDLMMCLPEVRYIAGKLVNVPLEQLPLLFKAFL 425
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|82198466|sp|Q66JK1.1|NR6A1_XENTR (RecName: Full=Nuclear receptor subfamily 6 group A member 1; AltName: Full=Germ cell nuclear factor; Short=GCNF) HSP 1 Score: 202.216 bits (513), Expect = 1.792e-57 Identity = 135/448 (30.13%), Postives = 211/448 (47.10%), Query Frame = 0 Query: 185 DDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNS--GAVY--------NMYKVKYKKNKNKSSGKTGGEI------STKETHQFDMPCQNINILRAALTGNSQISTQY------------KHLFVNR------DAEKNSFDHMQ--LINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLT--TSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSD----STSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 DD +++ + C+IC D+ATGLHYGII+CEGCKGFFKR++ NKR+Y C D +C +++ QRNRCQYCR KCL GM A+RED MPGGRN G V M ++++ N S G E++Q + L G + QY HLF + S D LIN L+ +D E ++T I + S+L LC++ D ++++ + W ++LPF+ +L + +T LL+ W EL++L+ T+ + I G T + + ELH + +D ++E++ + F Q K+ EEYVC+K I + N D S+ + + RY + + +P +P+R L++ LPEVR A L+ + +P L + + Sbjct: 6 DDRVDQRA--CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISDEEIERIMSGQEFEEEANTSWSNNGDSDHSSPGNGVSESNQPSPVSTPSSSRSMELNGFGSLRDQYLGTPGPMHYQYLPHLFSYSAHPTLIPTQSRSLDPQSHTLINQLLTAEDIEPLSTPMLIEDGYKVTQSELFALLCRLADELLFRQITWVKKLPFFCDLSIKDYTCLLSTTWQELILLSSLTTYSKQIFGDLADVTSKYSPSEDELH-------------------------RFSEDGMEVMERLIYLFRKFSQLKVSNEEYVCMKAINFL-NQDIQGISSVSQVEQLNKRYWYVCQDFTEYRYPHQPNRFPDLMMCLPEVRYIAGKLVNVPLEQLPLLFKAFL 425
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|150383440|sp|Q9PU65.2|GCNFA_DANRE (RecName: Full=Nuclear receptor subfamily 6 group A member 1-A; AltName: Full=Germ cell nuclear factor A; Short=GCNF-A; Short=zfGCNF) HSP 1 Score: 197.978 bits (502), Expect = 1.502e-55 Identity = 133/450 (29.56%), Postives = 210/450 (46.67%), Query Frame = 0 Query: 181 TQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRN-----------------SGAVY----NMYKVKYKKNKNK---------SSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYK---HLFVNRDAEKNSFDHMQ-LINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTT-SAYQA-IHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSD----STSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 +E H + E C+IC D+ATGLHYGII+CEGCKGFFKR++ NKR+Y C D +CE+++ QRNRCQYCR KCL GM A+RED MPGGRN SG + NM + + N + S G +ST +++ LR GN+ ++ Y+ HLF ++ + LI L+ +D + T I + +L LC++ D ++++ + W ++LPF+ +L ++ +T+LL+ W EL++L + Y A + G T + ELH +D ++EK+ + F Q K+ EEY C+K I + N D + L + RY + Y +P +P R ++++ LPE+R A L+ + +P L + + Sbjct: 29 AEENGIHDQAEQRSCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCEMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISDEEIERIMSGQEFKDEANMPEHTWGNNGDSDHSSPGNGVSDGNQPSPVSTLSSNRSVELNGYTTALREQYIGNA-MAQHYQFLPHLFGYAAQPRSLYPQSHTLIGQLVAAEDLAPLGTPMLIEDGYRVTQVELFALLCRLADELLFRQISWIKKLPFFCDLSIEDYTRLLSATWQELILLACLTVYSAQVLGDLANVTHKYTPSDDELH-------------------------SFSEDGMEVMEKLIYLFRKFHQLKVSNEEYACMKAINFL-NQDIRGLTNVTQLEQLNKRYWYVCQDYTEYKYPHQPKRFPEIMMCLPEIRCIAGKLVNIPLEQLPLLFKAVL 451
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|12643728|sp|Q15406.2|NR6A1_HUMAN (RecName: Full=Nuclear receptor subfamily 6 group A member 1; AltName: Full=Germ cell nuclear factor; Short=GCNF; Short=hGCNF; AltName: Full=Retinoid receptor-related testis-specific receptor; Short=RTR; Short=hRTR) HSP 1 Score: 191.815 bits (486), Expect = 3.299e-53 Identity = 132/456 (28.95%), Postives = 208/456 (45.61%), Query Frame = 0 Query: 175 KLTEGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRN-----------------SGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAA-LTGNSQISTQY------------KHLF--------VNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLT--TSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSD----STSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLL 586 +L GT DD E+ + C+IC D+ATGLHYGII+CEGCKGFFKR++ NKR+Y C D +C +++ QRNRCQYCR KCL GM A+RED MPGGRN SG + + + + G S E++Q P ++ R+ L G QY HLF + + A LI+ L+ +D E + T I + ++L LC++ D ++++ + W ++LPF+ EL + +T LL+ W EL++L+ T + I G T + ELH+ + ++E++ + F Q K+ EEY C+K I + N D +++ L + RY + + + +P+R L++ LPE+R A ++ + +P L Sbjct: 42 ELDPGTISVSDDRAEQRT--CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISEEEIERIMSGQEFEEEANHWSNHGDSDHSSPGNRAS--ESNQ-PSPGSTLSSSRSVELNGFMAFREQYMGMSVPPHYQYIPHLFSYSGHSPLLPQQARSLDPQSYSLIHQLLSAEDLEPLGTPMLIEDGYAVTQAELFALLCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLSSLTVYSKQIFGELADVTAKYSPSDEELHRFSDEGM-------------------------EVIERLIYLYHKFHQLKVSNEEYACMKAINFL-NQDIRGLTSASQLEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYIAGKMVNVPLEQLPLLF 466
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|82225956|sp|Q4V8R7.1|GCNFB_DANRE (RecName: Full=Nuclear receptor subfamily 6 group A member 1-B; AltName: Full=Germ cell nuclear factor B; Short=GCNF-B) HSP 1 Score: 191.045 bits (484), Expect = 4.583e-53 Identity = 132/436 (30.28%), Postives = 207/436 (47.48%), Query Frame = 0 Query: 183 EGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNS--GAVYNMYKVKYKKNKNKSSG---KTGGEISTKETHQFDMPCQNINILRAA------------LTGNSQISTQYKHLFV----NRDAEKNSFDHMQ---LINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDST----SPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 E DD E C+IC D+A+GLHYGII+CEGCKGFFKR++ NKRIY C D +C++++ QRNRCQYCR QKCL GM A+RED MPGGRN G V+ + ++ + SG K G ++S +H + N L + IS Q H F+ S Q L ++ +D + T I + + S+L LC I D ++++ + W +RLPF+ +L + T+LL WH+L++L++ +H + + GE A + + + TLQ + +D ++E + + F Q + EEY CLK I ++ N ++T + L + RY R + HP P R ++ L E+R + ++ + +P L + + Sbjct: 32 ETDDGGER---WCLICGDRASGLHYGIISCEGCKGFFKRSICNKRIYRCNRDKNCQMSRKQRNRCQYCRLQKCLQMGMNRKAIREDGMPGGRNKMIGPVH----ISLEEIERLMSGQEFKEGSDLSDSWSHGYSNHSSPGNSLSEGGQSLSFSSSRSVSCRDECISPQLTHTFLMCKYPLPPPTGSILKTQTHTLTGQILADEDLTPLTTPMLIEDGYSVTQSELLALLCGIADELLFRQIVWLKRLPFFTDLSIKDCTRLLGSSWHQLILLSSI---TVHSAQIL------GELANVTHHYTPSSHTLQ--------------RFGEDAMEVMESLNFLFRKFHQLNISNEEYSCLKTITLL-NQETTGLCNTSMLKQLSERYWTLCRELTERLHPQRPKRFSDIITCLTEIRHTSGKMMSIPLEQLPLLFKAVL 436
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|160419011|sp|A0P8Z4.2|NR6A1_PIG (RecName: Full=Nuclear receptor subfamily 6 group A member 1; AltName: Full=Germ cell nuclear factor; Short=GCNF) HSP 1 Score: 190.66 bits (483), Expect = 9.936e-53 Identity = 131/458 (28.60%), Postives = 206/458 (44.98%), Query Frame = 0 Query: 175 KLTEGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRN-----------------SGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQY------------KHLFV-----------NRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLT--TSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSD----STSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLL 586 +L T DD E+ + C+IC D+ATGLHYGII+CEGCKGFFKR++ NKR+Y C D +C +++ QRNRCQYCR KCL GM A+RED MPGGRN SG + + + + G S E++Q P ++ L G QY HLF R + S+ LI+ L+ +D E + T I + ++L LC++ D ++++ + W ++LPF+ EL + +T LL+ W EL++L+ T + I G T + ELH+ + ++E++ + F Q K+ EEY C+K I + N D +++ L + RY + + + +P+R L++ LPE+R A ++ + +P L Sbjct: 42 ELDPSTISVPDDRAEQRT--CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISEEEIERIMSGQEFEEEANHWSNHGDSDHSSPGNRAS--ESNQ-PSPGSTLSSRSVELNGFMAFRDQYMGMSVPPHYQYIPHLFSYSAHSPLLPPQARSLDPQSYS---LIHQLVSAEDLEPLGTPMLIEDGYAVTQAELFALLCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLSSLTVYSKQIFGELADVTAKYSPSDEELHRFSDEGM-------------------------EVIERLIYLYHKFHQLKVSNEEYACMKAINFL-NQDIRGLTSASQLEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYIAGKMVNVPLEQLPLLF 465
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|10720144|sp|Q64249.1|NR6A1_MOUSE (RecName: Full=Nuclear receptor subfamily 6 group A member 1; AltName: Full=Germ cell nuclear factor; Short=GCNF; Short=mGCNF; AltName: Full=Retinoid receptor-related testis-specific receptor; Short=RTR) HSP 1 Score: 187.963 bits (476), Expect = 1.162e-51 Identity = 130/446 (29.15%), Postives = 204/446 (45.74%), Query Frame = 0 Query: 185 DDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRN-----------------SGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAA-LTGNSQISTQY------------KHLFVNRD------AEKNSFD--HMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLT--TSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSD----STSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLL 586 DD E+ + C+IC D+ATGLHYGII+CEGCKGFFKR++ NKR+Y C D +C +++ QRNRCQYCR KCL GM A+RED MPGGRN SG + + + + G S E++Q P ++ R+ L G QY HLF + S D LI+ L+ +D E + T I + ++L LC++ D ++++ + W ++LPF+ EL + +T LL+ W EL++L+ T + I G T + ELH+ + ++E++ + F Q K+ EEY C+K I + N D +++ L + RY + + + +P+R L++ LPE+R A ++ + +P L Sbjct: 67 DDRAEQRT--CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISEEEIERIMSGQEFEEEANHWSNHGDSDHSSPGNRAS--ESNQ-PSPGSTLSSSRSVELNGFMAFRDQYMGMSVPPHYQYIPHLFSYSGHSPLLPPQARSLDPQSYSLIHQLMSAEDLEPLGTPMLIEDGYAVTQAELFALLCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLSSLTVYSKQIFGELADVTAKYSPSDEELHRFSDEGM-------------------------EVIERLIYLYHKFHQLKVSNEEYACMKAINFL-NQDIRGLTSASQLEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYIAGKMVNVPLEQLPLLF 481
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|55584048|sp|Q05192.3|FTF1B_DROME (RecName: Full=Nuclear hormone receptor FTZ-F1 beta; AltName: Full=Nuclear hormone receptor HR39; Short=dHR39; AltName: Full=Nuclear receptor subfamily 5 group B member 1) HSP 1 Score: 167.548 bits (423), Expect = 9.248e-43 Identity = 124/440 (28.18%), Postives = 194/440 (44.09%), Query Frame = 0 Query: 195 CMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVY-----NMYKVKYKKNKNKSSGKTGGEISTKETHQ----------FDMPCQNINILRAALTGNSQISTQY-----------------------KHLFVNRDAEKNSFD-----------------------HMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIH--GSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPI---YNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVR 568 C IC DK +G HYGI +CE CKGFFKRTVQN++ Y CV G C+++ + R +C CRF+KCL KGM L A+REDR GGR++ +M ++ ++ S ++ HQ +PC +L G S S + +HL+ DAE + H QL N L+ A L + GE N DL LC + D +YK+V+W + LP + + +D LL + W ELL+ + +++I G +M + G K L Q S LQTC+ M+ N+ + + R+ ++ EYV +KVI ++++ + V + + L+ L+AY H+P P + +LL+R+P+++ Sbjct: 376 CPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSMLSPLLSPDQAAAAAAAAAVASQQQPHQRLHQLNGFGGVPIPCSTSLPASPSLAGTSVKSEEMAETGKQSLRTGSVPPLLQEIMDVEHLWQYTDAELARINQPLSAFASGSSSSSSSSGTSSGAHAQLTNPLLAS------AGLSSNGENAN---PDLIAHLCNVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSC-CFRSIDTPGEIKM----SQGRKITLSQAKSNG---LQTCIERML--------------NLTDHLRRL-------RVDRYEYVAMKVIVLLQSDTTELQEAVKVRECQEKALQSLQAYTLAHYPDTPSKFGELLLRIPDLQ 777
BLAST of orphan nuclear receptor vs. nr
Match: gi|657600392|gb|AID52857.1| (hormone receptor 4 [Tigriopus japonicus]) HSP 1 Score: 734.176 bits (1894), Expect = 0.000e+0 Identity = 373/505 (73.86%), Postives = 414/505 (81.98%), Query Frame = 0 Query: 99 HHRLSEQAQ---KISSAVDGMLSLQSANTVARV------SSSGSSMEKVFPVCPRSEGSSYTRGIPINMEKLWDGDRTQLPANAKKLTEGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKT----GGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 HH + Q K+S+AVDG+LSLQS + R S+S +S+ + V P SY RG+PINMEKLW+GD++QLP +E T + E+E LICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVA+G CEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYN+YKVKYKK+K S G++ I+ E QF+ QNINILRAALTGN +IS+ YK + N +++ LIN LI CD+FED+ATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLV+WTRRLPFY ELPVD+HTKLLTHKWHELLVLTTSAYQAIHGS RMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKIT+VIALFRQCKLKMEEYVCLKVIAMV +D+ SPSLV I+NRYL CL+A+A QHHP EP+RV+ LLVRLPEVRVAA LLLESKMFYVPFLLNSSI Sbjct: 160 HHDMGSNEQHALKMSNAVDGLLSLQSGGPLTRFPQEMPQSTSQTSITEEIRVNP----PSYARGLPINMEKLWEGDKSQLPTQTTAKSEETDGKVGLAEEDEPLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVAEGSCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNLYKVKYKKHKKSSPGRSEMYGSKPINDLEVAQFNSHSQNINILRAALTGNVEISSHYKSILGRCQNHVNDQENINLINELIACDEFEDMATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVEWTRRLPFYKELPVDIHTKLLTHKWHELLVLTTSAYQAIHGSRRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITKVIALFRQCKLKMEEYVCLKVIAMVATADNPSPSLVTIHNRYLACLKAFAQQHHPQEPNRVENLLVRLPEVRVAAGLLLESKMFYVPFLLNSSI 660
BLAST of orphan nuclear receptor vs. nr
Match: gi|242009214|ref|XP_002425386.1| (orphan nuclear receptor nr6a1, putative [Pediculus humanus corporis] >gi|212509180|gb|EEB12648.1| orphan nuclear receptor nr6a1, putative [Pediculus humanus corporis]) HSP 1 Score: 538.11 bits (1385), Expect = 2.508e-180 Identity = 268/468 (57.26%), Postives = 336/468 (71.79%), Query Frame = 0 Query: 155 PINMEKLWDGDRTQLPANAKKLT----------------EGTTQEG----DDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNK------SSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 P+NME+LW GD TQLP + + +G T G D +E+ +ICMICED+ATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG+CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKV ++ NK ++ + G + + + + +P +N IL+ ALT S++ + L +RD + +I L+ CD+F+DIATL+N+ +LL+ SDL +KLCQIGDSIVYKLVQWT+RLPFY ELPV+VHT+LLTHKWHELLVLTTSAYQAIHG ++ + T G++A+ QEVS NLVTLQTCLTSMMG+PITMDQLRQDVG MVEKIT V +FR+ KL+MEEYVCLKVI M+ S L I +RY+ CL+++ P +P R +LL+RLPE++ AA+LLLESKMFYVPFLLNS+I Sbjct: 310 PLNMERLWAGDLTQLPVSQQNQALNLALPPGDWPRDGRPQGITIIGEPKHDPEDDEQPMICMICEDRATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGNCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVLMRERDNKFLNVIFNNNEKGNQQKSSISSEQTLPSHIVNGTILKTALTNPSEVVHLRQRLDNTVSSSRDRTFPLDTILNMIQALVDCDEFQDIATLRNLEDLLDHK-SDLSEKLCQIGDSIVYKLVQWTKRLPFYLELPVEVHTRLLTHKWHELLVLTTSAYQAIHGVHKLSSTSTAGQEADFTQEVSNNLVTLQTCLTSMMGRPITMDQLRQDVGLMVEKITHVTLMFRRVKLRMEEYVCLKVITMLNQGRGGSNELEAIQDRYMMCLKSFVEHSFPQQPARFHELLLRLPEIQSAASLLLESKMFYVPFLLNSAI 776
BLAST of orphan nuclear receptor vs. nr
Match: gi|1325293207|ref|XP_023330232.1| (hormone receptor 4-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 542.732 bits (1397), Expect = 5.507e-179 Identity = 277/483 (57.35%), Postives = 343/483 (71.01%), Query Frame = 0 Query: 156 INMEKLWDGDRTQLPANAKK----LTEGTTQEGDDHIEEES--LICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTG-------GEISTKETHQFDMP-------------------------------CQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMV-ENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSIVGS 593 ++M +LW G+ QLPA A+ + + G+ ++E+ +ICMIC+DKATGLHYGIITCEGCKGFFKRTVQNKR+Y CVADG+CEINKAQRNRCQYCRFQKCL +GMVLAAVREDRMPGGRNSGAVYNMYKVKYKK K + G + E Q D P +INIL+A LTG+ + QY+ R E+ D ++LI LI CDDFEDI+T +++ +LL+ + ++L +L +IGD+IV KLVQWTRRLPFY ++PV++HT LLT+KWHELLVLTTS+YQAI+GS RMGT R+DGE AELHQEV+TNLVTLQTCLTSMMG+PITMDQLRQDVGNMVEK+T+VI R +L +EEYVCLKV+AM+ E+ L I++RY+ CL+ Y + P +P+RV +LLV+LPEV+ AA LLL SKMFYVPFLLNS+I S Sbjct: 544 VDMAELWKGNLDQLPAQAQPSGSIFNRDSGEPGNRILDEDDQPMICMICDDKATGLHYGIITCEGCKGFFKRTVQNKRVYTCVADGNCEINKAQRNRCQYCRFQKCLERGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKQKKHPKPQMGQFNVMSKPSMKNIEFEQMDSPKSLLNLREEQKTASFQSTSLSSPSSPHPDTISPSINILKAVLTGSQEGLPQYRQFDRARRRERYE-DSLRLIQELIDCDDFEDISTFRDVNDLLDHSNAELSDRLSRIGDNIVVKLVQWTRRLPFYEDIPVNIHTSLLTNKWHELLVLTTSSYQAINGSRRMGTTRSDGETAELHQEVATNLVTLQTCLTSMMGRPITMDQLRQDVGNMVEKVTKVITSLRNFRLTIEEYVCLKVVAMLTEDGLVQHSELEEIHDRYMNCLKIYTEWNFPTQPNRVQELLVKLPEVQEAAGLLLASKMFYVPFLLNSTISSS 1025
BLAST of orphan nuclear receptor vs. nr
Match: gi|1325293212|ref|XP_023330233.1| (hormone receptor 4-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 541.576 bits (1394), Expect = 1.403e-178 Identity = 269/481 (55.93%), Postives = 341/481 (70.89%), Query Frame = 0 Query: 156 INMEKLWDGDRTQLPANAKK----LTEGTTQEGDDHIEEES--LICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNM----------------YKVKYK--------------------KNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMV-ENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSIVGS 593 ++M +LW G+ QLPA A+ + + G+ ++E+ +ICMIC+DKATGLHYGIITCEGCKGFFKRTVQNKR+Y CVADG+CEINKAQRNRCQYCRFQKCL +GMVLAAVREDRMPGGRNSGAVYNM + V K + + K++ +S+ + D +INIL+A LTG+ + QY+ R E+ D ++LI LI CDDFEDI+T +++ +LL+ + ++L +L +IGD+IV KLVQWTRRLPFY ++PV++HT LLT+KWHELLVLTTS+YQAI+GS RMGT R+DGE AELHQEV+TNLVTLQTCLTSMMG+PITMDQLRQDVGNMVEK+T+VI R +L +EEYVCLKV+AM+ E+ L I++RY+ CL+ Y + P +P+RV +LLV+LPEV+ AA LLL SKMFYVPFLLNS+I S Sbjct: 544 VDMAELWKGNLDQLPAQAQPSGSIFNRDSGEPGNRILDEDDQPMICMICDDKATGLHYGIITCEGCKGFFKRTVQNKRVYTCVADGNCEINKAQRNRCQYCRFQKCLERGMVLAAVREDRMPGGRNSGAVYNMYKYKKQKKHPKPQMGQFNVMSKPSMKNIEFEQMDSPKSLLNLREEQKTASFQSTSLSSPSSPHPDTISPSINILKAVLTGSQEGLPQYRQFDRARRRERYE-DSLRLIQELIDCDDFEDISTFRDVNDLLDHSNAELSDRLSRIGDNIVVKLVQWTRRLPFYEDIPVNIHTSLLTNKWHELLVLTTSSYQAINGSRRMGTTRSDGETAELHQEVATNLVTLQTCLTSMMGRPITMDQLRQDVGNMVEKVTKVITSLRNFRLTIEEYVCLKVVAMLTEDGLVQHSELEEIHDRYMNCLKIYTEWNFPTQPNRVQELLVKLPEVQEAAGLLLASKMFYVPFLLNSTISSS 1023
BLAST of orphan nuclear receptor vs. nr
Match: gi|939683917|ref|XP_014286562.1| (PREDICTED: hormone receptor 4 isoform X5 [Halyomorpha halys]) HSP 1 Score: 523.857 bits (1348), Expect = 1.648e-176 Identity = 277/478 (57.95%), Postives = 333/478 (69.67%), Query Frame = 0 Query: 146 EGSSYTRGI--------PINMEKLWDGDRTQLPANAKKLT------------EGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKV-------KYKKNKNKSSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 EGSS + G +NME+LW GD +QLP A++LT + QEGD E++ +ICMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKV + + K G + + E MP +N IL+ ALT S++ + L +RD + + +I LI CD+F+DIATL+N+ +LL+ SDL KL QIGDSIVYKLVQWT+RLPFY ELPV+VHTKLLTH WHELLVLTTSAYQAIHG+ R+ + +DG +A QEVS NL TLQTCLTSMMG+PITMDQLRQDVG MVEKIT V +FR+ KL M+EYVCLKVI M+ S + L + RY+ CLR Y P +P+R LL+RLPEV+ AA+LLLESKMFYVPFLLNS+I Sbjct: 168 EGSSISPGAVTGSASGRSLNMERLWAGDLSQLPG-AQQLTALNLSWAKPGLHQDKQQEGDIEEEDQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGVCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKHKKSVRNGQMKGQADKGKPLISPEPASH-MPPHLVNGTILKTALTNPSEVVHLRQRLDSAVSSSRDRALSVDTTLSVIQTLIDCDEFQDIATLRNLEDLLDHK-SDLSDKLMQIGDSIVYKLVQWTKRLPFYLELPVEVHTKLLTHTWHELLVLTTSAYQAIHGAHRLVSTGSDGTEANFTQEVSNNLCTLQTCLTSMMGRPITMDQLRQDVGLMVEKITYVTLMFRRIKLTMQEYVCLKVIIMLNPSRGDANELEAMQERYMTCLRTYVEHSFPNQPNRFHDLLLRLPEVQSAASLLLESKMFYVPFLLNSTI 642
BLAST of orphan nuclear receptor vs. nr
Match: gi|939683920|ref|XP_014286563.1| (PREDICTED: hormone receptor 4 isoform X6 [Halyomorpha halys]) HSP 1 Score: 523.087 bits (1346), Expect = 2.235e-176 Identity = 277/478 (57.95%), Postives = 333/478 (69.67%), Query Frame = 0 Query: 146 EGSSYTRGI--------PINMEKLWDGDRTQLPANAKKLT------------EGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKV-------KYKKNKNKSSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 EGSS + G +NME+LW GD +QLP A++LT + QEGD E++ +ICMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKV + + K G + + E MP +N IL+ ALT S++ + L +RD + + +I LI CD+F+DIATL+N+ +LL+ SDL KL QIGDSIVYKLVQWT+RLPFY ELPV+VHTKLLTH WHELLVLTTSAYQAIHG+ R+ + +DG +A QEVS NL TLQTCLTSMMG+PITMDQLRQDVG MVEKIT V +FR+ KL M+EYVCLKVI M+ S + L + RY+ CLR Y P +P+R LL+RLPEV+ AA+LLLESKMFYVPFLLNS+I Sbjct: 161 EGSSISPGAVTGSASGRSLNMERLWAGDLSQLPG-AQQLTALNLSWAKPGLHQDKQQEGDIEEEDQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGVCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKHKKSVRNGQMKGQADKGKPLISPEPASH-MPPHLVNGTILKTALTNPSEVVHLRQRLDSAVSSSRDRALSVDTTLSVIQTLIDCDEFQDIATLRNLEDLLDHK-SDLSDKLMQIGDSIVYKLVQWTKRLPFYLELPVEVHTKLLTHTWHELLVLTTSAYQAIHGAHRLVSTGSDGTEANFTQEVSNNLCTLQTCLTSMMGRPITMDQLRQDVGLMVEKITYVTLMFRRIKLTMQEYVCLKVIIMLNPSRGDANELEAMQERYMTCLRTYVEHSFPNQPNRFHDLLLRLPEVQSAASLLLESKMFYVPFLLNSTI 635
BLAST of orphan nuclear receptor vs. nr
Match: gi|939683914|ref|XP_014286561.1| (PREDICTED: hormone receptor 4 isoform X4 [Halyomorpha halys]) HSP 1 Score: 523.472 bits (1347), Expect = 3.363e-176 Identity = 277/478 (57.95%), Postives = 333/478 (69.67%), Query Frame = 0 Query: 146 EGSSYTRGI--------PINMEKLWDGDRTQLPANAKKLT------------EGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKV-------KYKKNKNKSSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 EGSS + G +NME+LW GD +QLP A++LT + QEGD E++ +ICMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKV + + K G + + E MP +N IL+ ALT S++ + L +RD + + +I LI CD+F+DIATL+N+ +LL+ SDL KL QIGDSIVYKLVQWT+RLPFY ELPV+VHTKLLTH WHELLVLTTSAYQAIHG+ R+ + +DG +A QEVS NL TLQTCLTSMMG+PITMDQLRQDVG MVEKIT V +FR+ KL M+EYVCLKVI M+ S + L + RY+ CLR Y P +P+R LL+RLPEV+ AA+LLLESKMFYVPFLLNS+I Sbjct: 181 EGSSISPGAVTGSASGRSLNMERLWAGDLSQLPG-AQQLTALNLSWAKPGLHQDKQQEGDIEEEDQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGVCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKHKKSVRNGQMKGQADKGKPLISPEPASH-MPPHLVNGTILKTALTNPSEVVHLRQRLDSAVSSSRDRALSVDTTLSVIQTLIDCDEFQDIATLRNLEDLLDHK-SDLSDKLMQIGDSIVYKLVQWTKRLPFYLELPVEVHTKLLTHTWHELLVLTTSAYQAIHGAHRLVSTGSDGTEANFTQEVSNNLCTLQTCLTSMMGRPITMDQLRQDVGLMVEKITYVTLMFRRIKLTMQEYVCLKVIIMLNPSRGDANELEAMQERYMTCLRTYVEHSFPNQPNRFHDLLLRLPEVQSAASLLLESKMFYVPFLLNSTI 655
BLAST of orphan nuclear receptor vs. nr
Match: gi|939683912|ref|XP_014286560.1| (PREDICTED: hormone receptor 4 isoform X3 [Halyomorpha halys]) HSP 1 Score: 523.087 bits (1346), Expect = 4.452e-176 Identity = 277/478 (57.95%), Postives = 333/478 (69.67%), Query Frame = 0 Query: 146 EGSSYTRGI--------PINMEKLWDGDRTQLPANAKKLT------------EGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKV-------KYKKNKNKSSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 EGSS + G +NME+LW GD +QLP A++LT + QEGD E++ +ICMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKV + + K G + + E MP +N IL+ ALT S++ + L +RD + + +I LI CD+F+DIATL+N+ +LL+ SDL KL QIGDSIVYKLVQWT+RLPFY ELPV+VHTKLLTH WHELLVLTTSAYQAIHG+ R+ + +DG +A QEVS NL TLQTCLTSMMG+PITMDQLRQDVG MVEKIT V +FR+ KL M+EYVCLKVI M+ S + L + RY+ CLR Y P +P+R LL+RLPEV+ AA+LLLESKMFYVPFLLNS+I Sbjct: 185 EGSSISPGAVTGSASGRSLNMERLWAGDLSQLPG-AQQLTALNLSWAKPGLHQDKQQEGDIEEEDQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGVCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKHKKSVRNGQMKGQADKGKPLISPEPASH-MPPHLVNGTILKTALTNPSEVVHLRQRLDSAVSSSRDRALSVDTTLSVIQTLIDCDEFQDIATLRNLEDLLDHK-SDLSDKLMQIGDSIVYKLVQWTKRLPFYLELPVEVHTKLLTHTWHELLVLTTSAYQAIHGAHRLVSTGSDGTEANFTQEVSNNLCTLQTCLTSMMGRPITMDQLRQDVGLMVEKITYVTLMFRRIKLTMQEYVCLKVIIMLNPSRGDANELEAMQERYMTCLRTYVEHSFPNQPNRFHDLLLRLPEVQSAASLLLESKMFYVPFLLNSTI 659
BLAST of orphan nuclear receptor vs. nr
Match: gi|939683905|ref|XP_014286557.1| (PREDICTED: hormone receptor 4 isoform X1 [Halyomorpha halys]) HSP 1 Score: 523.472 bits (1347), Expect = 6.255e-176 Identity = 273/463 (58.96%), Postives = 328/463 (70.84%), Query Frame = 0 Query: 153 GIPINMEKLWDGDRTQLPANAKKLT------------EGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKV-------KYKKNKNKSSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 G +NME+LW GD +QLP A++LT + QEGD E++ +ICMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKV + + K G + + E MP +N IL+ ALT S++ + L +RD + + +I LI CD+F+DIATL+N+ +LL+ SDL KL QIGDSIVYKLVQWT+RLPFY ELPV+VHTKLLTH WHELLVLTTSAYQAIHG+ R+ + +DG +A QEVS NL TLQTCLTSMMG+PITMDQLRQDVG MVEKIT V +FR+ KL M+EYVCLKVI M+ S + L + RY+ CLR Y P +P+R LL+RLPEV+ AA+LLLESKMFYVPFLLNS+I Sbjct: 214 GRSLNMERLWAGDLSQLPG-AQQLTALNLSWAKPGLHQDKQQEGDIEEEDQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGVCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKHKKSVRNGQMKGQADKGKPLISPEPASH-MPPHLVNGTILKTALTNPSEVVHLRQRLDSAVSSSRDRALSVDTTLSVIQTLIDCDEFQDIATLRNLEDLLDHK-SDLSDKLMQIGDSIVYKLVQWTKRLPFYLELPVEVHTKLLTHTWHELLVLTTSAYQAIHGAHRLVSTGSDGTEANFTQEVSNNLCTLQTCLTSMMGRPITMDQLRQDVGLMVEKITYVTLMFRRIKLTMQEYVCLKVIIMLNPSRGDANELEAMQERYMTCLRTYVEHSFPNQPNRFHDLLLRLPEVQSAASLLLESKMFYVPFLLNSTI 673
BLAST of orphan nuclear receptor vs. nr
Match: gi|939683908|ref|XP_014286558.1| (PREDICTED: hormone receptor 4 isoform X2 [Halyomorpha halys]) HSP 1 Score: 523.087 bits (1346), Expect = 7.625e-176 Identity = 277/478 (57.95%), Postives = 333/478 (69.67%), Query Frame = 0 Query: 146 EGSSYTRGI--------PINMEKLWDGDRTQLPANAKKLT------------EGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKV-------KYKKNKNKSSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 EGSS + G +NME+LW GD +QLP A++LT + QEGD E++ +ICMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKV + + K G + + E MP +N IL+ ALT S++ + L +RD + + +I LI CD+F+DIATL+N+ +LL+ SDL KL QIGDSIVYKLVQWT+RLPFY ELPV+VHTKLLTH WHELLVLTTSAYQAIHG+ R+ + +DG +A QEVS NL TLQTCLTSMMG+PITMDQLRQDVG MVEKIT V +FR+ KL M+EYVCLKVI M+ S + L + RY+ CLR Y P +P+R LL+RLPEV+ AA+LLLESKMFYVPFLLNS+I Sbjct: 194 EGSSISPGAVTGSASGRSLNMERLWAGDLSQLPG-AQQLTALNLSWAKPGLHQDKQQEGDIEEEDQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGVCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKHKKSVRNGQMKGQADKGKPLISPEPASH-MPPHLVNGTILKTALTNPSEVVHLRQRLDSAVSSSRDRALSVDTTLSVIQTLIDCDEFQDIATLRNLEDLLDHK-SDLSDKLMQIGDSIVYKLVQWTKRLPFYLELPVEVHTKLLTHTWHELLVLTTSAYQAIHGAHRLVSTGSDGTEANFTQEVSNNLCTLQTCLTSMMGRPITMDQLRQDVGLMVEKITYVTLMFRRIKLTMQEYVCLKVIIMLNPSRGDANELEAMQERYMTCLRTYVEHSFPNQPNRFHDLLLRLPEVQSAASLLLESKMFYVPFLLNSTI 668 The following BLAST results are available for this feature:
BLAST of orphan nuclear receptor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of orphan nuclear receptor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of orphan nuclear receptor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold491_size156641:8337..11777+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold491_size156641-snap-gene-0.24 ID=maker-scaffold491_size156641-snap-gene-0.24|Name=orphan nuclear receptor|organism=Tigriopus kingsejongensis|type=gene|length=3441bp|location=Sequence derived from alignment at scaffold491_size156641:8337..11777+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'orphan nuclear receptor' has the following synonyms
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