AGAP008073-PA, maker-scaffold579_size130606-snap-gene-0.30 (gene) Tigriopus kingsejongensis

Overview
NameAGAP008073-PA
Unique Namemaker-scaffold579_size130606-snap-gene-0.30
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of AGAP008073-PA vs. L. salmonis genes
Match: EMLSAG00000004787 (supercontig:LSalAtl2s:LSalAtl2s251:254548:255037:-1 gene:EMLSAG00000004787 transcript:EMLSAT00000004787 description:"maker-LSalAtl2s251-augustus-gene-2.3")

HSP 1 Score: 73.1738 bits (178), Expect = 1.406e-17
Identity = 43/133 (32.33%), Postives = 65/133 (48.87%), Query Frame = 0
Query:    1 MVHLGPQLRRGVDIRSLPNGRVPIPRASAVGFQERIPLALRNHVKGTVGAKKAKACVPQMIEMMSCLERVDQNQAMCQKEIQSFQNCFETFKAQELAALEARGKLGAGLTGSNVRLSSGQMTSMLRKFPTSQR 133
            MVH    L +  D+ +  NGR  +     V F+E IPL L N VKG        AC   ++ ++ CL++ D NQ MC +EI  F  C     A++ AAL+         +G   +L+  +M +  ++FP S R
Sbjct:    1 MVHTTRVLEKARDLTNRKNGRRSLTEKD-VHFKEHIPLVLNNFVKGGGTKDMGFACAKDLLSVVGCLQKYDMNQNMCSQEIARFNTCNAKM-ARDRAALKESRSNSKVPSGQYTKLTGNEMNTYFKQFPQSPR 131          
BLAST of AGAP008073-PA vs. nr
Match: gi|1325287975|ref|XP_023328745.1| (uncharacterized protein LOC111701613 [Eurytemora affinis] >gi|1325287977|ref|XP_023328746.1| uncharacterized protein LOC111701613 [Eurytemora affinis])

HSP 1 Score: 93.2041 bits (230), Expect = 3.134e-21
Identity = 56/136 (41.18%), Postives = 76/136 (55.88%), Query Frame = 0
Query:    4 LGPQL-RRGVDIRSLPN-GRVPIPRASAVGFQERIPLALRNHVKGTVGAKKAKACVPQMIEMMSCLERVDQNQAMCQKEIQSFQNCFETFKAQELAALEARGKLGAGLTGSNVRLSSGQMTSMLRKFPTSQRRTAF 137
            L P L RR  DI   P  GR  I +   V + ER PLAL+N+V       + KAC  +M+E++SC+ + DQNQ+MC KE+ SF  CF+ FK Q+   L    K G   TGS  ++S  QM   ++KF  S R+  F
Sbjct:   12 LSPTLFRRADDIHGRPGFGRKNI-QDHQVPYIERTPLALKNNVSLKSSKDRKKACFEEMMEVISCMSKYDQNQSMCGKELTSFNACFKNFKDQQ-GVLNEIKKSGTLPTGSRAKMSGEQMNLYMKKFQQSSRKGEF 145          
BLAST of AGAP008073-PA vs. nr
Match: gi|668450128|gb|KFB39439.1| (AGAP008073-PA-like protein [Anopheles sinensis])

HSP 1 Score: 77.0258 bits (188), Expect = 2.251e-15
Identity = 43/116 (37.07%), Postives = 66/116 (56.90%), Query Frame = 0
Query:   16 SLPNGRVPIPRASAVGFQERIPLALRNHVKGTVGAKKAKACVPQMIEMMSCLERVDQNQAMCQKEIQSFQNCFETFKAQELAALEARGKLGAGLTGSNVRLSSGQMTSMLRKFPTS 131
            +L   RVP   A  V FQE +PL L+NHV G        AC+ +M  + SCL+  D N+++C KE+ +FQ C++ F  ++ A  E   K G  + G +  L+  Q+  +L+K+PTS
Sbjct:    6 ALLRSRVPQNEAD-VPFQEVLPLRLKNHVSGKTDKTSDVACLQEMAVLFSCLKTNDFNESLCAKEVGNFQRCYKVFLDKKTAKKETSSK-GVLVAGKD--LNYKQLNKVLKKYPTS 117          
BLAST of AGAP008073-PA vs. nr
Match: gi|158297103|ref|XP_001689027.1| (AGAP008073-PA [Anopheles gambiae str. PEST] >gi|157015034|gb|EDO63590.1| AGAP008073-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 75.0998 bits (183), Expect = 1.196e-14
Identity = 38/102 (37.25%), Postives = 60/102 (58.82%), Query Frame = 0
Query:   30 VGFQERIPLALRNHVKGTVGAKKAKACVPQMIEMMSCLERVDQNQAMCQKEIQSFQNCFETFKAQELAALEARGKLGAGLTGSNVRLSSGQMTSMLRKFPTS 131
            V FQE +PL L+NHV G        AC+ +M  M SCL+  D N+++C KE+ +FQ C++ +  ++ A  E   K G  + G +  L+  Q+  +L+K+PTS
Sbjct:   19 VPFQEVLPLKLKNHVSGKTDKTSDVACLQEMAVMFSCLKTNDFNESLCAKEVGNFQRCYKVYLDKKTAKKETSSK-GVLVAGKD--LNYKQLNKVLKKYPTS 117          
BLAST of AGAP008073-PA vs. nr
Match: gi|568255990|gb|ETN64633.1| (hypothetical protein AND_003623 [Anopheles darlingi])

HSP 1 Score: 75.0998 bits (183), Expect = 1.488e-14
Identity = 40/114 (35.09%), Postives = 65/114 (57.02%), Query Frame = 0
Query:   21 RVPIPR-ASAVGFQERIPLALRNHVKGTVGAKKAKACVPQMIEMMSCLERVDQNQAMCQKEIQSFQNCFETFKAQELAALEARGKLGAGLTGSNVRLSSGQMTSMLRKFPTSQR 133
            RV  P+  S V FQE +PL L+NHV G        AC+ +M  + SCL+  D N+++C KE+ +FQ C++ +  ++    E  GK   G+  +   L+  Q+  +L+K+PTS +
Sbjct:    9 RVRKPQNESDVPFQEVLPLRLKNHVSGKTDKTSDVACLQEMTVLFSCLKTNDFNESLCAKEVGNFQQCYKGYLGKKSVKKETSGK---GMLVAGKDLNYKQLNKVLKKYPTSSQ 119          
BLAST of AGAP008073-PA vs. nr
Match: gi|939685832|ref|XP_014287186.1| (PREDICTED: coiled-coil-helix-coiled-coil-helix domain-containing protein 1 [Halyomorpha halys])

HSP 1 Score: 73.9442 bits (180), Expect = 3.557e-14
Identity = 47/114 (41.23%), Postives = 62/114 (54.39%), Query Frame = 0
Query:   24 IPRAS-----AVGFQERIPLALRNHVKGTVGAKKAKACVPQMIEMMSCLERVDQNQAMCQKEIQSFQNCFETFKAQ--ELAALEARGKLGAGLTGSNVRLSSGQMTSMLRKFPT 130
            IPR S      V F+E +PL LRN V G      + ACV +M  M +CL++ D  Q+ C KEI SFQNC+ T K Q  +   LE +G L  G      +LS  Q   +L+KFP+
Sbjct:   12 IPRGSYANPKLVPFEEVLPLKLRNMVSGKGDKSSSGACVQEMSVMFACLKKHDFKQSPCAKEISSFQNCYTTHKEQLAQKQQLEKKGLLVPG----EKQLSHKQANLLLKKFPS 121          
BLAST of AGAP008073-PA vs. nr
Match: gi|321466181|gb|EFX77178.1| (hypothetical protein DAPPUDRAFT_305870 [Daphnia pulex])

HSP 1 Score: 70.8626 bits (172), Expect = 6.422e-13
Identity = 38/111 (34.23%), Postives = 58/111 (52.25%), Query Frame = 0
Query:   21 RVPIPRASAVGFQERIPLALRNHVKGTVGAKKAKACVPQMIEMMSCLERVDQNQAMCQKEIQSFQNCFETFKAQELAALEARGKLGAGLTGSNVRLSSGQMTSMLRKFPTS 131
            R P+P      FQE +PL L++ V G        AC+  M  M++C ++ D NQA+C KEI SFQ+C+  F+       E    +   L G+  RL    +  +L+K+P+S
Sbjct:   22 REPVP------FQEILPLKLKDSVSGKGEKTSDVACLQDMAVMLACFKKHDFNQALCSKEISSFQSCYSKFENDR----EQAKNMDNTLVGAKSRLPYKTLNKILKKYPSS 122          
BLAST of AGAP008073-PA vs. nr
Match: gi|114153258|gb|ABI52795.1| (conserved hypothetical protein [Argas monolakensis])

HSP 1 Score: 70.4774 bits (171), Expect = 1.043e-12
Identity = 38/116 (32.76%), Postives = 65/116 (56.03%), Query Frame = 0
Query:   19 NGRVP-IPRASAVGFQERIPLALRNHVKGTVGAKKAKACVPQMIEMMSCLERVDQNQAMCQKEIQSFQNCFETFKAQELAALEARGKLGAGLTGSNV-RLSSGQMTSMLRKFPTSQ 132
            NGR P +P      F+E +P+ L++ V G VG +   AC+P+M+ + SCL     +   C KE+ +FQ C++  +A++ A   A G LG    G     L+S Q  ++L+++P ++
Sbjct:   10 NGRRPAVP---PFKFREMLPMQLKDKVSGKVGRQNDVACLPEMMTLFSCLAEKSYDSLNCSKEVSAFQKCYDAHRAKK-AQYRAAGSLGILTPGQKASELTSQQANTLLKRYPVTK 121          
BLAST of AGAP008073-PA vs. nr
Match: gi|1339065724|ref|XP_023721356.1| (uncharacterized protein LOC111872050 isoform X2 [Cryptotermes secundus])

HSP 1 Score: 68.5514 bits (166), Expect = 4.522e-12
Identity = 41/115 (35.65%), Postives = 63/115 (54.78%), Query Frame = 0
Query:   19 NGRVP--IPRASAVGFQERIPLALRNHVKGTVGAKKAKACVPQMIEMMSCLERVDQNQAMCQKEIQSFQNCFETF--KAQELAALEARGKLGAGLTGSNVRLSSGQMTSMLRKFP 129
            N R+P  +P+   V FQE +PL L+  V G        AC+ +M  + +C +  D NQA+C KEI +FQ+C++ +  K  +    E +G L  G      +L+S Q+  +LRKFP
Sbjct:    6 NLRIPARLPQREPVPFQEVLPLRLKKAVSGKGDRTSDVACLYEMSILFACFKNNDFNQALCSKEINNFQSCYKNYMSKKNKKKDQEQQGILVPG----EKKLTSKQVNVLLRKFP 116          
BLAST of AGAP008073-PA vs. nr
Match: gi|1227970072|ref|XP_021916429.1| (coiled-coil-helix-coiled-coil-helix domain-containing protein 1 [Zootermopsis nevadensis] >gi|646718994|gb|KDR21265.1| Coiled-coil-helix-coiled-coil-helix domain-containing protein 1 [Zootermopsis nevadensis])

HSP 1 Score: 67.781 bits (164), Expect = 8.694e-12
Identity = 37/113 (32.74%), Postives = 60/113 (53.10%), Query Frame = 0
Query:   19 NGRVP--IPRASAVGFQERIPLALRNHVKGTVGAKKAKACVPQMIEMMSCLERVDQNQAMCQKEIQSFQNCFETFKAQELAALEARGKLGAGLTGSNVRLSSGQMTSMLRKFP 129
            N ++P  +P+   V F+E +PL L+  V G        AC+ +M  M +C +  + NQ +C KEI SFQNC++ F  Q    ++ R +    L      L+  Q+ ++LR+FP
Sbjct:    6 NLKIPARVPQKEPVPFKEILPLRLKETVSGKGDKTSDVACLHEMSIMFACFKNNEFNQELCSKEISSFQNCYKDF--QNKKNIKKRQEQKGILIPGEKNLTHKQLNTLLRRFP 116          
BLAST of AGAP008073-PA vs. nr
Match: gi|1253678310|ref|XP_022672760.1| (uncharacterized protein LOC111255260 [Varroa destructor] >gi|1268065337|ref|XP_022704268.1| uncharacterized protein LOC111269140 [Varroa jacobsoni])

HSP 1 Score: 68.1662 bits (165), Expect = 8.745e-12
Identity = 32/109 (29.36%), Postives = 61/109 (55.96%), Query Frame = 0
Query:   25 PRASAVGFQERIPLALRNHVKGTVGAKKAKACVPQMIEMMSCLERVDQNQAMCQKEIQSFQNCFETFKAQELAALEARGKLGAGLTGSNVR-LSSGQMTSMLRKFPTSQ 132
            P    + F+E +P+ L++ V G     K  AC+P+M  + +CL + D +   C  E+++FQ C++   A  +A  +A+G LG  +    +  ++S Q+ ++L+K+P  Q
Sbjct:   24 PVVRKIPFREMLPMQLKDKVSGKKENSKGVACLPEMFTLFTCLSKTDFDTLKCPNEVKAFQLCYKNHTAN-VAEYKAKGSLGILVPDQKLNDMTSQQINTLLKKYPIGQ 131          
The following BLAST results are available for this feature:
BLAST of AGAP008073-PA vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000047871.406e-1732.33supercontig:LSalAtl2s:LSalAtl2s251:254548:255037:-... [more]
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BLAST of AGAP008073-PA vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of AGAP008073-PA vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1325287975|ref|XP_023328745.1|3.134e-2141.18uncharacterized protein LOC111701613 [Eurytemora a... [more]
gi|668450128|gb|KFB39439.1|2.251e-1537.07AGAP008073-PA-like protein [Anopheles sinensis][more]
gi|158297103|ref|XP_001689027.1|1.196e-1437.25AGAP008073-PA [Anopheles gambiae str. PEST] >gi|15... [more]
gi|568255990|gb|ETN64633.1|1.488e-1435.09hypothetical protein AND_003623 [Anopheles darling... [more]
gi|939685832|ref|XP_014287186.1|3.557e-1441.23PREDICTED: coiled-coil-helix-coiled-coil-helix dom... [more]
gi|321466181|gb|EFX77178.1|6.422e-1334.23hypothetical protein DAPPUDRAFT_305870 [Daphnia pu... [more]
gi|114153258|gb|ABI52795.1|1.043e-1232.76conserved hypothetical protein [Argas monolakensis... [more]
gi|1339065724|ref|XP_023721356.1|4.522e-1235.65uncharacterized protein LOC111872050 isoform X2 [C... [more]
gi|1227970072|ref|XP_021916429.1|8.694e-1232.74coiled-coil-helix-coiled-coil-helix domain-contain... [more]
gi|1253678310|ref|XP_022672760.1|8.745e-1229.36uncharacterized protein LOC111255260 [Varroa destr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold579_size130606supercontigscaffold579_size130606:40580..42871 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold579_size130606-snap-gene-0.30-mRNA-1maker-scaffold579_size130606-snap-gene-0.30-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold579_size130606:40580..42871-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold579_size130606-snap-gene-0.30 ID=maker-scaffold579_size130606-snap-gene-0.30|Name=AGAP008073-PA|organism=Tigriopus kingsejongensis|type=gene|length=2292bp|location=Sequence derived from alignment at scaffold579_size130606:40580..42871- (Tigriopus kingsejongensis)
CTTGTGTTGTGGTTGTTCTATAGGCTGGGCAGTGTGTACAAGTGGTAGCC ATGGTGCACTTGGGTCCACAGCTCCGGCGAGGGGTCGATATTCGCTCACT GCCCAATGGGCGTGTTCCCATTCCTCGGGCTAGTGCCGTGGGCTTCCAGG AGCGTATCCCTCTGGCCCTCCGTAACCACGTGAAGGGCACGGTCGGGGCC AAGAAGGCCAAGGCTTGCGTGCCGCAAATGATCGAAATGATGTCGTGTCT GGAGCGCGTCGACCAGAATCAGGCCATGTGCCAGAAAGAAATCCAGAGGT GAGCCACGTTGACGGACCACTGCTCCCAGGGGGTGCCATCAGTCCAATCA GTGGGCTGGGCCACGTCGAACCTCGAATTAATTTCCATACAACCCACCCC TGTGAGACAGGCATGCTTGGGCTTTTAATGTCAGCCTCAAGAACGTATGC CCCAGCGGGCTTCAAAGGGCCAAGATGAGCTGGCCTGTCCCCCAGGTGTT TGGCACGCCCTTAAAATGGGTCCACACTTTACCTCTGATATTGGGCCTAG AGCAACTTGGGCTCACCGCGCTGCCGATGTGTTTGTAATCGAAATTAATG TTCTAGGTATATTTTTTTCTGTCCAGACAATGTCCTTTTCGGTCTCGGCT ACGTTTTGACTTAGTTATAATGAAGATAAAAGGCCTACTTACTGTAGAAT AAAGCTGGGGATGAAGACAGCAGCTGAAATAAATGCATAAAATATGGAAT GGGAGAATGATGAATGTAAAGACGCCAGGGAACATTGAGATCGAGAGAAT GCAACTAAAAAAAAGAGGTATACGTCAACACTTCGCTAACACGTACGTGC TAGTCAGTAGGACTTTGTAATTGTGCTCTGGTCTTCAGTATGGCGAATTT TAGTATCAGAATCAGTATACCCCGAACCAGGTCTATCATAAGTAATCTAT CATAAGTATCAAAACGCACTAACGCTTGCGATCCGCAAACGTTAGTGCGT TTTAATAACAATTGAGAACAAGAGTCCGAAAAGATCAAAAATGAAGGCCT GCATCGGCTTCATAAACGTGATTTCATTGAACATTTACAAAAATAAACAG TGAGAATTAAAGCCAATCGCTGTAAAACGGTGCATTTCCTTCCGACAAAA ATCATCTCCGAGTAATTGTACTCATTGTCTAAGCGACTTCTCTCGATATA GTCTCGACTTCACCGGTGATTGCCTCTGAAATAGGATGTACATGATGGAT TATGCCCAACTGATGTCCAAAACCATGTTCCAACTCGAACTGGGTTGACA GCCATCGAAAATTCCGTTTTCAGCCAGATGGAGCATCTAGGGCTAATTTT TGGATTCCTAATTAGTAGGATCCGAATTAGAAGGAACTGGTTGAAGCGCT TCCTTCCTTTTTCACCCAAAACGATCTCTATTTGTCTGATATGGCTGTTG CGAAGCGCTTCTACAACCTCAAAAACGATGAAAAAAGTTAAAATGTTAGG TACCAAAAGATGAACATTGTGACTGGAATTTGCACCTTATTTGACCGGTT TTTTTGCTCGGGGTAGTTATAAATTTTGCCTGAATTGACAAGAAAGTTGG ATTGAAAGGGTCAGTCTGGTGGATAAACTTATCATGAAATATCACCAGTA CGCCCAGTTTAATCCCACAAAGGGAAGCACACAATAGCTGTGATTTTGCA GCACCAGAGGCCGCTGCGCTACTCTGCTTGCCTCGAAATATTTGCGTTTT GTCACGTTCATTGGTAGTGGACACCAATGAATGCCATTCAAGCAGCATGT TTTACTATGAGACCTTCAGCAAGGCAGTCTTTTACACGTGTTAGGATGGC CGACTTGCAGATTTTACTGTTTACCATGGTTTGAGCGTCGACATTTGGCC AGCTTTGTTGCTGGTAGATTCACTAGCGAACCGATGGTTGCAATGTACGT ATCCTCGCATGTTTGCAGGGAAATCTATGTATTTGGTAAACAGAGAGAGA AACAAATGACTGACATGGTTTGAACAGCTTTCAGAACTGCTTCGAGACGT TCAAGGCACAAGAGCTGGCCGCTCTGGAGGCCCGTGGCAAGCTGGGCGCC GGTCTTACCGGGTCCAATGTGCGCCTCTCGAGTGGGCAGATGACCTCGAT GTTGCGCAAGTTTCCCACAAGTCAACGGAGGACGGCCTTCTATTACGAGA AGCCCACCAATCGGGATTACTAGACCGGCTCCGGTCAGCCTCTGTATGCT TCTCAGTCGTTAGTACAATAAATCACTGGTCCTAATCGCGTA
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Synonyms
The feature 'AGAP008073-PA' has the following synonyms
Synonym
Tk02368
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