1308219borf 2, maker-scaffold5_size1054832-snap-gene-3.9 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 1308219borf 2 vs. nr
Match: gi|1043417628|gb|OCA30260.1| (hypothetical protein XENTR_v90019622mg [Xenopus tropicalis]) HSP 1 Score: 72.7886 bits (177), Expect = 9.091e-12 Identity = 27/104 (25.96%), Postives = 64/104 (61.54%), Query Frame = 0 Query: 88 GRSMEIEHLLRGRKDSFNHLMRGKKSELNHLLRGKKSEMDHLLRGRRSEVDHLLRGRRSELEHLLRGRRSELEHLLRGKKSTLADGDFERLPRSGDMNHLLRGK 191 R +E+ H+++ R NH+++ + ELNH+++ + E+DH+++ R E++H+++ + EL+H+++ R EL H+++ + L R ++NH+++ + Sbjct: 161 NRPIELNHVIKNRPIELNHMIKNQPIELNHVIKNQPIELDHVIKNRPIELNHMIKNQPIELDHVIKNRPIELNHMIKNQPIELNHVIKN---RPIELNHVIKNQ 261 HSP 2 Score: 68.1662 bits (165), Expect = 4.108e-10 Identity = 24/104 (23.08%), Postives = 62/104 (59.62%), Query Frame = 0 Query: 88 GRSMEIEHLLRGRKDSFNHLMRGKKSELNHLLRGKKSEMDHLLRGRRSEVDHLLRGRRSELEHLLRGRRSELEHLLRGKKSTLADGDFERLPRSGDMNHLLRGK 191 + +E+ H+++ R NH+++ + ELNH+++ + E++H+++ + E+DH+++ R EL H+++ + EL+H+++ R ++NH+++ + Sbjct: 150 NQPIELNHVIKNRPIELNHVIKNRPIELNHMIKNQPIELNHVIKNQPIELDHVIKNRPIELNHMIKNQPIELDHVIKN--------------RPIELNHMIKNQ 239 HSP 3 Score: 67.3958 bits (163), Expect = 7.076e-10 Identity = 22/86 (25.58%), Postives = 56/86 (65.12%), Query Frame = 0 Query: 88 GRSMEIEHLLRGRKDSFNHLMRGKKSELNHLLRGKKSEMDHLLRGRRSEVDHLLRGRRSELEHLLRGRRSELEHLLRGKKSTLADG 173 + +E+ H+++ + +H+++ + ELNH+++ + E+DH+++ R E++H+++ + EL H+++ R EL H+++ + L+ G Sbjct: 183 NQPIELNHVIKNQPIELDHVIKNRPIELNHMIKNQPIELDHVIKNRPIELNHMIKNQPIELNHVIKNRPIELNHVIKNQPIDLSHG 268 HSP 4 Score: 60.4622 bits (145), Expect = 2.438e-7 Identity = 20/86 (23.26%), Postives = 55/86 (63.95%), Query Frame = 0 Query: 88 GRSMEIEHLLRGRKDSFNHLMRGKKSELNHLLRGKKSEMDHLLRGRRSEVDHLLRGRRSELEHLLRGRRSELEHLLRGKKSTLADG 173 + +E++H+++ R NH+++ + EL+H+++ + E++H+++ + E++H+++ R EL H+++ + +L H ++ + L G Sbjct: 194 NQPIELDHVIKNRPIELNHMIKNQPIELDHVIKNRPIELNHMIKNQPIELNHVIKNRPIELNHVIKNQPIDLSHGMKNQPIKLNHG 279
BLAST of 1308219borf 2 vs. nr
Match: gi|1043417627|gb|OCA30259.1| (hypothetical protein XENTR_v90019622mg [Xenopus tropicalis]) HSP 1 Score: 70.0922 bits (170), Expect = 2.953e-11 Identity = 28/97 (28.87%), Postives = 61/97 (62.89%), Query Frame = 0 Query: 74 LSYDPLDFSIEPRPGRSMEIEHLLRGRKDSFNHLMRGKKSELNHLLRGKKSEMDHLLRGRRSEVDHLLRGRRSELEHLLRGRRSELEHLLRGKKSTL 170 LS+ + IE R +E+ H+++ R NH+++ + ELNH+++ + E+DH+++ R E++H+++ + EL+H+++ R EL H+++ + L Sbjct: 52 LSHGMKNQPIELNHNRPIELNHVIKNRPIELNHMIKNQPIELNHVIKNQPIELDHVIKNRPIELNHMIKNQPIELDHVIKNRPIELNHMIKNQPIEL 148 HSP 2 Score: 65.0846 bits (157), Expect = 2.219e-9 Identity = 25/106 (23.58%), Postives = 61/106 (57.55%), Query Frame = 0 Query: 88 GRSMEIEHLLRGRKDSFNHLMRGKKSELNHLLRGKKSEMDHLLRGRRSEVDHLLRGRRSELEHLLRGRRSELEHLLRGKKSTLADGDFERLPRSGDMNHLLRGKKS 193 R +E+ H+++ + NH+++ + EL+H+++ + E++H+++ + E+DH+++ R EL H+++ + EL H+++ + L L H+L G ++ Sbjct: 77 NRPIELNHMIKNQPIELNHVIKNQPIELDHVIKNRPIELNHMIKNQPIELDHVIKNRPIELNHMIKNQPIELNHVIKNRPIELNHSTMNLL-------HILIGAET 175 HSP 3 Score: 58.9214 bits (141), Expect = 3.631e-7 Identity = 24/104 (23.08%), Postives = 59/104 (56.73%), Query Frame = 0 Query: 88 GRSMEIEHLLRGRKDSFNHLMRGKKSELNHLLRGKKSEMDHLLRGRRSEVDHLLRGRRSELEHLLRGRRSELEHLLRGKKSTLADGDFERLPRSGDMNHLLRGK 191 + +E+ H R NH+++ + ELNH+++ + E++H+++ + E+DH+++ R EL H+++ + EL+H+++ R ++NH+++ + Sbjct: 58 NQPIELNH---NRPIELNHVIKNRPIELNHMIKNQPIELNHVIKNQPIELDHVIKNRPIELNHMIKNQPIELDHVIKN--------------RPIELNHMIKNQ 144
BLAST of 1308219borf 2 vs. nr
Match: gi|739816756|ref|WP_037668475.1| (DUF3618 domain-containing protein [Streptomyces griseus]) HSP 1 Score: 62.7734 bits (151), Expect = 9.442e-9 Identity = 22/76 (28.95%), Postives = 47/76 (61.84%), Query Frame = 0 Query: 90 SMEIEHLLRGRKDSFNHLMRGKKSELNHLLRGKKSEMDHLLRGRRSEVDHLLRGRRSELEHLLRGRRSELEHLLRG 165 + + H+++GR +H+++GK ++ H ++GK S H L+GR + ++++GR S+ H+++GR + H + G Sbjct: 67 AAQASHVVQGRASQASHVVQGKAAQAGHAVQGKASHAGHALQGRAGQAGNVVQGRASQAGHVVQGRAEQAGHAVEG 142
BLAST of 1308219borf 2 vs. nr
Match: gi|225641|prf||1308219B (ORF 2) HSP 1 Score: 62.003 bits (149), Expect = 3.242e-8 Identity = 38/138 (27.54%), Postives = 59/138 (42.75%), Query Frame = 0 Query: 57 LEDAKQGKFFALRGKRSLSYDPLDFSIEPRPGRSME--IEHLLRGRKDSFNHLMRGKKSELNHLLRGKKSEMDHLLRGRRSEVDHLLRGRRSELEHLLRGRRSELEHLLRGKKSTLADGDFERLPRSGD--MNHLLRG 190 + + Q + +R + + + + P R HL+R + S NHLMR +NHL+R +HL+R +HL+R HL+R HL+R +ST L RS +NHL+R Sbjct: 14 MRNHHQNTYLLMRNR----HQNTNLLMRNHPMRIHHRSTNHLMRSHQ-STNHLMRSHHQSMNHLMRNHHQNTNHLMRSHHQNTNHLMRNHHQNTNHLMRSHHQSTNHLMRSHQST------SHLMRSHHQSINHLMRN 140
BLAST of 1308219borf 2 vs. nr
Match: gi|918206971|ref|WP_052344290.1| (hypothetical protein [Bacillus ndiopicus]) HSP 1 Score: 58.9214 bits (141), Expect = 3.415e-7 Identity = 35/94 (37.23%), Postives = 51/94 (54.26%), Query Frame = 0 Query: 87 PGRSMEIEHLLRGRKDSFNHLMRGKKSELNHLLRGKKSEMDHLLRGRRSEVDHLLRGRRSELEHLLRGRRSELEHLLRGKKSTLADGDFERLPR 180 GR ++EH L G+ + H + GK L H L GK E++H L G+ ++H + G+ ELEH L G+ ELEH + GK L ER+ + Sbjct: 44 EGRMEKLEHRLEGKMEVLEHRLEGKIEALEHRLEGKIEELEHRLEGKMEALEHRIEGKMEELEHGLEGKIEELEHRIEGKMEELKHSLEERMEK 137 The following BLAST results are available for this feature:
BLAST of 1308219borf 2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 0
BLAST of 1308219borf 2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of 1308219borf 2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 5
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold5_size1054832:309365..320438+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold5_size1054832-snap-gene-3.9 ID=maker-scaffold5_size1054832-snap-gene-3.9|Name=1308219borf 2|organism=Tigriopus kingsejongensis|type=gene|length=11074bp|location=Sequence derived from alignment at scaffold5_size1054832:309365..320438+ (Tigriopus kingsejongensis)back to top Synonyms
The feature '1308219borf 2' has the following synonyms
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