AGAP009116-PA, maker-scaffold612_size124412-snap-gene-0.21 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of AGAP009116-PA vs. L. salmonis genes
Match: EMLSAG00000002725 (supercontig:LSalAtl2s:LSalAtl2s1574:64408:65553:-1 gene:EMLSAG00000002725 transcript:EMLSAT00000002725 description:"maker-LSalAtl2s1574-augustus-gene-0.28") HSP 1 Score: 142.124 bits (357), Expect = 1.374e-39 Identity = 56/85 (65.88%), Postives = 73/85 (85.88%), Query Frame = 0 Query: 410 MFSDILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLYLAK 494 MF D+ +F+ N+L T L+FI+IYF+ITLSDLECDYLNAQECCGKLNFWNVPK WLQ++++ +LLL GHW LFL N+P+C++L + Sbjct: 1 MFGDLFVFSFNLLDTTVLMFILIYFIITLSDLECDYLNAQECCGKLNFWNVPKYWLQISMILILLLSGHWFLFLLNIPICIFLTQ 85
BLAST of AGAP009116-PA vs. SwissProt
Match: gi|12229837|sp|Q9P003.1|CNIH4_HUMAN (RecName: Full=Protein cornichon homolog 4; Short=CNIH-4; AltName: Full=Cornichon family AMPA receptor auxiliary protein 4 >gi|62900351|sp|Q5R9M4.1|CNIH4_PONAB RecName: Full=Protein cornichon homolog 4; Short=CNIH-4; AltName: Full=Cornichon family AMPA receptor auxiliary protein 4) HSP 1 Score: 87.0409 bits (214), Expect = 4.472e-19 Identity = 36/79 (45.57%), Postives = 54/79 (68.35%), Query Frame = 0 Query: 413 DILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLY 491 + ++F ++L L+F+ +YF+ITLSDLECDY+NA+ CC KLN W +P+L + +LL+ HW +FL NLPV + Sbjct: 2 EAVVFVFSLLDCCALIFLSVYFIITLSDLECDYINARSCCSKLNKWVIPELIGHTIVTVLLLMSLHWFIFLLNLPVATW 80
BLAST of AGAP009116-PA vs. SwissProt
Match: gi|110278915|sp|Q3T126.1|CNIH4_BOVIN (RecName: Full=Protein cornichon homolog 4; Short=CNIH-4; AltName: Full=Cornichon family AMPA receptor auxiliary protein 4) HSP 1 Score: 85.8853 bits (211), Expect = 1.376e-18 Identity = 35/79 (44.30%), Postives = 54/79 (68.35%), Query Frame = 0 Query: 413 DILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLY 491 + ++F ++L L+F+ +YF+ITLSDLECDY+NA+ CC KLN W +P+L + ++L+ HW +FL NLPV + Sbjct: 2 EAVVFVFSLLDCCALIFLSVYFIITLSDLECDYINARSCCSKLNKWVIPELVGHTLVTVLMLISLHWFIFLLNLPVAAW 80
BLAST of AGAP009116-PA vs. SwissProt
Match: gi|62900373|sp|Q9CX13.1|CNIH4_MOUSE (RecName: Full=Protein cornichon homolog 4; Short=CNIH-4; AltName: Full=Cornichon family AMPA receptor auxiliary protein 4) HSP 1 Score: 85.1149 bits (209), Expect = 2.066e-18 Identity = 35/79 (44.30%), Postives = 54/79 (68.35%), Query Frame = 0 Query: 413 DILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLY 491 + ++F ++L L+F+ +YF+ITLSDLECDY+NA+ CC KLN W +P+L + ++L+ HW +FL NLPV + Sbjct: 2 EAVVFLFSLLDCCALIFLSVYFIITLSDLECDYINARSCCSKLNKWVIPELVGHTIVTVLMLVSLHWFIFLLNLPVATW 80
BLAST of AGAP009116-PA vs. SwissProt
Match: gi|62900356|sp|Q6P3N5.1|CNIH4_XENTR (RecName: Full=Protein cornichon homolog 4; Short=CNIH-4; AltName: Full=Cornichon family AMPA receptor auxiliary protein 4) HSP 1 Score: 84.7297 bits (208), Expect = 3.624e-18 Identity = 35/76 (46.05%), Postives = 52/76 (68.42%), Query Frame = 0 Query: 416 LFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLY 491 LF +++ L+F+ +YF+ITLSDLECDY+NA+ CC KLN W VP+L + ++L+ HW +F+ NLPV + Sbjct: 5 LFIFSLIDCCALIFLSVYFIITLSDLECDYINARSCCSKLNKWVVPELVGHTVVSVLMLVSLHWFIFILNLPVAAW 80
BLAST of AGAP009116-PA vs. SwissProt
Match: gi|75169292|sp|Q9C7D7.1|CNIH1_ARATH (RecName: Full=Protein cornichon homolog 1) HSP 1 Score: 64.6994 bits (156), Expect = 4.277e-11 Identity = 47/162 (29.01%), Postives = 75/162 (46.30%), Query Frame = 0 Query: 410 MFSDILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLYLAKSRSNPVMAKRTPANIAAVMNMIEEDRRVDIDTIAAKLDLCFGTVHIIFRKDLNYSKTALPAFAKSTANFRLLMITIH 571 M D+ L+ ++ ++L LV + Y +I L+DLE DYLN E ++N +P+ LQ ++ + LL HW+ FL +PV +Y A M+ ++RR ID ++ G I F K L Y+K F FRL + ++ Sbjct: 1 MAWDLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLLFLLTWHWVFFLVAVPVTVYHA---------------------MLYKERRYLIDVT----EVFRG---ISFEKKLRYTKLGFYVFLFIMVVFRLTLSAVY 134
BLAST of AGAP009116-PA vs. SwissProt
Match: gi|586332|sp|P38312.1|ERV15_YEAST (RecName: Full=ER-derived vesicles protein ERV15) HSP 1 Score: 60.8474 bits (146), Expect = 6.916e-10 Identity = 31/78 (39.74%), Postives = 43/78 (55.13%), Query Frame = 0 Query: 416 LFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLYLA 493 LF ++L IYF I DLE DY+N+ E C ++N +VP+ LQ I + L G+W +FL N+PV Y A Sbjct: 8 LFVTGLILNCLNSICQIYFTILYGDLEADYINSIELCKRVNRLSVPEAILQAFISALFLFNGYWFVFLLNVPVLAYNA 85
BLAST of AGAP009116-PA vs. SwissProt
Match: gi|1723832|sp|P53173.3|ERV14_YEAST (RecName: Full=ER-derived vesicles protein ERV14) HSP 1 Score: 60.4622 bits (145), Expect = 1.003e-9 Identity = 30/76 (39.47%), Postives = 43/76 (56.58%), Query Frame = 0 Query: 416 LFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLY 491 LF L V++ +F ++F I +DLE DY+N E C K+N P+ L + + LL G+W +FL NLPV Y Sbjct: 5 LFILAVVVNCINLFGQVHFTILYADLEADYINPIELCSKVNKLITPEAALHGALSLLFLLNGYWFVFLLNLPVLAY 80
BLAST of AGAP009116-PA vs. SwissProt
Match: gi|75148636|sp|Q84W04.1|CNIH4_ARATH (RecName: Full=Protein cornichon homolog 4) HSP 1 Score: 55.4546 bits (132), Expect = 5.707e-8 Identity = 27/79 (34.18%), Postives = 43/79 (54.43%), Query Frame = 0 Query: 413 DILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLY 491 DI + ++ + LV II+Y L+ L+DLE DY+N + ++N +P+ +Q + LL GHW + L LP Y Sbjct: 3 DIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYY 81
BLAST of AGAP009116-PA vs. SwissProt
Match: gi|308154341|sp|Q9SZ74.2|CNIH5_ARATH (RecName: Full=Protein cornichon homolog 5) HSP 1 Score: 53.5286 bits (127), Expect = 2.171e-7 Identity = 26/79 (32.91%), Postives = 44/79 (55.70%), Query Frame = 0 Query: 413 DILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLY 491 D+L + ++ L TL+ I+IY L L+DLE D +N + ++N +P+ LQ + +L GHW + + +LP Y Sbjct: 3 DLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLYYILTGHWFMAVLSLPHLFY 81
BLAST of AGAP009116-PA vs. nr
Match: gi|1325268613|ref|XP_023346905.1| (protein cornichon homolog 4-like [Eurytemora affinis]) HSP 1 Score: 117.472 bits (293), Expect = 1.127e-26 Identity = 59/103 (57.28%), Postives = 77/103 (74.76%), Query Frame = 0 Query: 412 SDILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLYLAKS-----RSNPVMAKRTPANI 509 DILLFAL+++ T L+FI+++F+ITLSDLECDYLNAQECCG+LNFWN+PKLW QL + +L L GHWML L NLP+C++L + R N + + PA I Sbjct: 2 GDILLFALSLVDTGALIFILVFFIITLSDLECDYLNAQECCGRLNFWNIPKLWSQLLLPILLTLTGHWMLVLLNLPICIWLIRQFHCIRRGN--LGEYDPAEI 102
BLAST of AGAP009116-PA vs. nr
Match: gi|118791650|ref|XP_319866.3| (AGAP009116-PA [Anopheles gambiae str. PEST] >gi|116117704|gb|EAA14707.3| AGAP009116-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 112.849 bits (281), Expect = 2.334e-25 Identity = 48/83 (57.83%), Postives = 64/83 (77.11%), Query Frame = 0 Query: 410 MFSDILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLYL 492 MF + L+FAL + +T ++F++IY+LI LSDLECDYLNAQECC KLNFW++PKL + F+LL+ GHWML L NLP+ +L Sbjct: 1 MFPETLVFALALFITGAILFLLIYYLIILSDLECDYLNAQECCSKLNFWSIPKLAAHAFLTFVLLIHGHWMLCLVNLPMVGWL 83
BLAST of AGAP009116-PA vs. nr
Match: gi|91081297|ref|XP_968817.1| (PREDICTED: protein cornichon homolog 4 [Tribolium castaneum] >gi|1004400902|gb|KYB28060.1| Protein cornichon-like Protein [Tribolium castaneum]) HSP 1 Score: 107.842 bits (268), Expect = 1.217e-23 Identity = 46/84 (54.76%), Postives = 65/84 (77.38%), Query Frame = 0 Query: 409 IMFSDILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLYL 492 ++FSD LLFA ++L T ++F+++YF+ITLSDLECDYLNAQECC KLN W++PKL + F+ L+ GHW+L L NLP+ ++ Sbjct: 1 MIFSDPLLFAFSLLNTGAVLFLLVYFVITLSDLECDYLNAQECCSKLNQWSLPKLIAHGFLSFLFLIHGHWILALLNLPMAFWM 84
BLAST of AGAP009116-PA vs. nr
Match: gi|668447073|gb|KFB36977.1| (AGAP009116-PA-like protein [Anopheles sinensis]) HSP 1 Score: 107.842 bits (268), Expect = 1.301e-23 Identity = 46/83 (55.42%), Postives = 65/83 (78.31%), Query Frame = 0 Query: 410 MFSDILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLYL 492 MF + L+F L +L+T ++F++IYFLI LSDLECDYLNAQ+CC KLNFW++PKL ++F+LL+ G+W+L L NLP+ +L Sbjct: 1 MFPETLVFGLALLITGAILFLLIYFLIILSDLECDYLNAQQCCSKLNFWSIPKLAGHAFLVFLLLIHGNWILCLCNLPMVGWL 83
BLAST of AGAP009116-PA vs. nr
Match: gi|568257489|gb|ETN65777.1| (ER-derived vesicles protein ERV14 [Anopheles darlingi]) HSP 1 Score: 107.071 bits (266), Expect = 2.310e-23 Identity = 47/83 (56.63%), Postives = 64/83 (77.11%), Query Frame = 0 Query: 410 MFSDILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLYL 492 MF + L+FAL +L+T ++F++IYFLI LSDLECDYLNAQ+CC KLNFW++PKL + F+LL+ G+W L L NLP+ +L Sbjct: 1 MFPETLVFALAMLITGAILFLLIYFLIILSDLECDYLNAQQCCSKLNFWSIPKLAGHGFLAFLLLMHGNWFLCLANLPMIGWL 83
BLAST of AGAP009116-PA vs. nr
Match: gi|1279714437|ref|XP_022901676.1| (protein cornichon homolog 4 [Onthophagus taurus]) HSP 1 Score: 107.071 bits (266), Expect = 2.407e-23 Identity = 44/83 (53.01%), Postives = 63/83 (75.90%), Query Frame = 0 Query: 410 MFSDILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLYL 492 M SD +FAL ++ T L+F+ IY++IT+SDLECDYLNAQ+CC KLNFW PKL ++F+LL+ GHW+L +FN+P+ ++ Sbjct: 1 MVSDPFVFALALINTGALLFLWIYYIITISDLECDYLNAQQCCSKLNFWVTPKLCFHSGMVFLLLITGHWILVIFNMPLTAHM 83
BLAST of AGAP009116-PA vs. nr
Match: gi|1285004136|ref|XP_023013888.1| (protein cornichon homolog 4 [Leptinotarsa decemlineata]) HSP 1 Score: 105.145 bits (261), Expect = 1.238e-22 Identity = 44/85 (51.76%), Postives = 64/85 (75.29%), Query Frame = 0 Query: 409 IMFSDILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLYLA 493 ++ SD LLF ++L T ++F+++YF+ITLSDLECDYLNAQECC +LN W +PKL + F+ L+ GHW+L +FNLP+ ++A Sbjct: 1 MILSDSLLFCFSLLDTGAILFLLVYFVITLSDLECDYLNAQECCSRLNQWVLPKLSCHALLSFLFLIHGHWILTIFNLPMVAWMA 85
BLAST of AGAP009116-PA vs. nr
Match: gi|170029403|ref|XP_001842582.1| (ER-derived vesicles protein ERV14 [Culex quinquefasciatus] >gi|167862413|gb|EDS25796.1| ER-derived vesicles protein ERV14 [Culex quinquefasciatus]) HSP 1 Score: 104.76 bits (260), Expect = 1.380e-22 Identity = 45/83 (54.22%), Postives = 63/83 (75.90%), Query Frame = 0 Query: 410 MFSDILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLYL 492 M + L+FA+ +L+T ++F++IYF+I LSDLECDYLNAQ+CC KLNFW VPKL + F+LLL G W+LF+ N P+ ++L Sbjct: 1 MLPETLVFAIAMLITGAILFLLIYFVIILSDLECDYLNAQQCCSKLNFWVVPKLSAHCFLAFVLLLNGSWILFIANAPMVVWL 83
BLAST of AGAP009116-PA vs. nr
Match: gi|1000746449|ref|XP_015595996.1| (PREDICTED: protein cornichon homolog 4 [Cephus cinctus]) HSP 1 Score: 103.219 bits (256), Expect = 4.654e-22 Identity = 45/84 (53.57%), Postives = 63/84 (75.00%), Query Frame = 0 Query: 410 MFSDILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPVCLYLA 493 M S+ LLFA ++ T ++F+++YF+ITLSDLECDYLNA +CC KLN W +PKL + I+ ++LL GHW+L L NLP+ +LA Sbjct: 1 MISEPLLFAFALVDTGAVLFLLVYFVITLSDLECDYLNAPQCCSKLNRWVMPKLIAHVFIVLLMLLHGHWILTLVNLPMTFWLA 84
BLAST of AGAP009116-PA vs. nr
Match: gi|157125190|ref|XP_001660639.1| (protein cornichon homolog 4 [Aedes aegypti] >gi|1218244221|ref|XP_021702739.1| protein cornichon homolog 4 [Aedes aegypti] >gi|108873717|gb|EAT37942.1| AAEL010119-PA [Aedes aegypti]) HSP 1 Score: 102.064 bits (253), Expect = 1.224e-21 Identity = 43/79 (54.43%), Postives = 59/79 (74.68%), Query Frame = 0 Query: 410 MFSDILLFALNVLLTLTLVFIIIYFLITLSDLECDYLNAQECCGKLNFWNVPKLWLQLTILFMLLLFGHWMLFLFNLPV 488 M + L+F + +L+T ++F++IYF+I LSDLECDYLNAQ+CC KLNFW VPKL + F+LL+ G W LF+ NLP+ Sbjct: 1 MLPETLVFGIALLITGVILFLLIYFVIILSDLECDYLNAQQCCSKLNFWVVPKLSAHCFLAFILLMNGSWFLFIANLPM 79 The following BLAST results are available for this feature:
BLAST of AGAP009116-PA vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of AGAP009116-PA vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 9
BLAST of AGAP009116-PA vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold612_size124412:49991..70167+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold612_size124412-snap-gene-0.21 ID=maker-scaffold612_size124412-snap-gene-0.21|Name=AGAP009116-PA|organism=Tigriopus kingsejongensis|type=gene|length=20177bp|location=Sequence derived from alignment at scaffold612_size124412:49991..70167+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'AGAP009116-PA' has the following synonyms
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