60s ribosomal protein l27a, maker-scaffold646_size120253-snap-gene-0.18 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 60s ribosomal protein l27a vs. L. salmonis genes
Match: EMLSAG00000012539 (supercontig:LSalAtl2s:LSalAtl2s923:150712:153740:1 gene:EMLSAG00000012539 transcript:EMLSAT00000012539 description:"maker-LSalAtl2s923-augustus-gene-0.23") HSP 1 Score: 269.626 bits (688), Expect = 4.028e-88 Identity = 125/142 (88.03%), Postives = 132/142 (92.96%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVG 317 MSTNKKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHA+ NQYCP VNLDKLWSLVSEQTR KY K+ KKAPVIDV++AG+FKVLGKG LP QPVIVKAR FSR+AEEKIK VG Sbjct: 1 MSTNKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHAHTINQYCPSVNLDKLWSLVSEQTREKYAKDKKKAPVIDVTKAGYFKVLGKGLLPNQPVIVKARLFSRKAEEKIKSVG 142
BLAST of 60s ribosomal protein l27a vs. L. salmonis genes
Match: EMLSAG00000005993 (supercontig:LSalAtl2s:LSalAtl2s324:130653:152658:1 gene:EMLSAG00000005993 transcript:EMLSAT00000005993 description:"snap_masked-LSalAtl2s324-processed-gene-1.24") HSP 1 Score: 50.447 bits (119), Expect = 2.993e-7 Identity = 36/105 (34.29%), Postives = 59/105 (56.19%), Query Frame = 0 Query: 2 IKLRIALVH----LCGGALISRKHILSAAHCFCRVLISCSYLDKGKPKMFVPRPSSV-----VVEFSVPP--PESL-EVSRVIIHPLYQSSWTPRSHDMAILELQ 94 I +R H CGG+LI+R+ +LSAAHCFC + C +G ++ + + + + ++ P P+ L +V RVII+P Y+ ++ HD+A+LELQ Sbjct: 38 ISIRTVGTHSSLSFCGGSLINRQWVLSAAHCFC-IFNPCFSDLQGNTQLDYEASTHLEAIVGLSDMTLLPRHPQLLKKVLRVIIYPKYKDNY----HDIALLELQ 137
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|75060399|sp|Q56K03.3|RL27A_BOVIN (RecName: Full=60S ribosomal protein L27a) HSP 1 Score: 238.039 bits (606), Expect = 4.519e-78 Identity = 115/150 (76.67%), Postives = 130/150 (86.67%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKN-TKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 M + +KTRKLRGHVSHGHGR+GKHRKHPGGRGNAGG HHHRINFDKYHPGYFGKVGMR++H+ NQ +CP VNLDKLW+LVSEQTR+ KN T AP+IDV R+G++KVLGKG LPKQPVIVKA+FFSR+AEEKIK VGGACVL A Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRHYHLKRNQ--SFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKGVGGACVLVA 148
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|75076570|sp|Q4R723.1|RL27A_MACFA (RecName: Full=60S ribosomal protein L27a) HSP 1 Score: 237.269 bits (604), Expect = 8.500e-78 Identity = 115/150 (76.67%), Postives = 130/150 (86.67%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKN-TKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 M + +KTRKLRGHVSHGHGR+GKHRKHPGGRGNAGG HHHRINFDKYHPGYFGKVGMR++H+ NQ +CP VNLDKLW+LVSEQTR+ KN T AP+IDV R+G++KVLGKG LPKQPVIVKA+FFSR+AEEKIK VGGACVL A Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMRHYHLKRNQ--SFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKGVGGACVLVA 148
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|306526288|sp|P14115.5|RL27A_MOUSE (RecName: Full=60S ribosomal protein L27a; AltName: Full=L29) HSP 1 Score: 237.269 bits (604), Expect = 9.688e-78 Identity = 115/150 (76.67%), Postives = 130/150 (86.67%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKN-TKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 M + +KTRKLRGHVSHGHGR+GKHRKHPGGRGNAGG HHHRINFDKYHPGYFGKVGMR++H+ NQ +CP VNLDKLW+LVSEQTR+ KN T AP+IDV R+G++KVLGKG LPKQPVIVKA+FFSR+AEEKIK VGGACVL A Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRHYHLKRNQ--SFCPTVNLDKLWTLVSEQTRVNAAKNKTGVAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKGVGGACVLVA 148
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|1173017|sp|P46776.2|RL27A_HUMAN (RecName: Full=60S ribosomal protein L27a; AltName: Full=Large ribosomal subunit protein uL15 >gi|60393659|sp|Q5REY2.3|RL27A_PONAB RecName: Full=60S ribosomal protein L27a) HSP 1 Score: 236.498 bits (602), Expect = 1.783e-77 Identity = 114/150 (76.00%), Postives = 130/150 (86.67%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKN-TKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 M + +KTRKLRGHVSHGHGR+GKHRKHPGGRGNAGG HHHRINFDKYHPGYFGKVGM+++H+ NQ +CP VNLDKLW+LVSEQTR+ KN T AP+IDV R+G++KVLGKG LPKQPVIVKA+FFSR+AEEKIK VGGACVL A Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKRNQ--SFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVGGACVLVA 148
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|132846|sp|P18445.3|RL27A_RAT (RecName: Full=60S ribosomal protein L27a) HSP 1 Score: 235.728 bits (600), Expect = 3.246e-77 Identity = 114/150 (76.00%), Postives = 129/150 (86.00%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKK-APVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 M + +KTRKLRGHVSHGHGR+GKHRKHPGGRGNAGG HHHRINFDKYHPGYFGKVGMR++H+ NQ +CP VNLDKLW+LVSEQTR+ KN AP+IDV R+G++KVLGKG LPKQPVIVKA+FFSR+AEEKIK VGGACVL A Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRHYHLKRNQ--SFCPTVNLDKLWTLVSEQTRVNAAKNKNGVAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKGVGGACVLVA 148
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|1350712|sp|P47830.2|RL27A_XENLA (RecName: Full=60S ribosomal protein L27a; AltName: Full=L22) HSP 1 Score: 235.728 bits (600), Expect = 3.354e-77 Identity = 113/150 (75.33%), Postives = 129/150 (86.00%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKK-APVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 M + +KTRKLRGHVSHGHGR+GKHRKHPGGRGNAGG HHHRINFDKYHPGYFGKVGMR++H+ NQ +CP +NLDKLW+LVSEQTRL + KN + AP+ID AG++KVLGKG LPKQPVIVKA+FFSR+AEEKIK VGGACVL A Sbjct: 1 MPSKLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRHYHLKKNQ--SFCPTINLDKLWTLVSEQTRLNHAKNLEGPAPIIDAVHAGYYKVLGKGKLPKQPVIVKAKFFSRKAEEKIKSVGGACVLGA 148
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|59800187|sp|Q5R1X0.3|RL27A_PANTR (RecName: Full=60S ribosomal protein L27a) HSP 1 Score: 234.572 bits (597), Expect = 8.557e-77 Identity = 113/150 (75.33%), Postives = 129/150 (86.00%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKN-TKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 M + +KTRKLRGHVSHGHGR+GKHRKHPGGRGNAGG HHHRINFDKYHPGYFGKVGM+++H+ NQ +CP VNLDKLW+LVSEQTR+ KN T AP+IDV R+G++KVLGKG LPKQPVIVKA+FFSR+AEEKIK VGGACVL Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKRNQ--SFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVGGACVLVG 148
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|3122699|sp|O01358.1|RL27A_OSCTI (RecName: Full=60S ribosomal protein L27a; AltName: Full=Ribosomal protein RPL-27) HSP 1 Score: 218.394 bits (555), Expect = 1.885e-70 Identity = 105/149 (70.47%), Postives = 125/149 (83.89%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 M+ + +KTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRIN DKYHPGYFGKVGMR FH+ N+ + YCP VN+D+LW+LV E+ + K + +KAPVID +AG+FKVLGKG LPKQP+IVKA+FFS +AE KIK GGAC+L A Sbjct: 1 MAHSLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINRDKYHPGYFGKVGMRVFHL--NKNHHYCPTVNVDRLWALVPEEQKTKV--SAEKAPVIDCVKAGYFKVLGKGLLPKQPLIVKAKFFSHEAENKIKAAGGACILVA 145
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|20455458|sp|P41092.2|RL27A_DROME (RecName: Full=60S ribosomal protein L27a) HSP 1 Score: 211.075 bits (536), Expect = 1.668e-67 Identity = 101/150 (67.33%), Postives = 128/150 (85.33%), Query Frame = 0 Query: 177 STNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQ--TRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 + +KKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGG HHHRINFDKYHPGYFGKVGMRNFH+ + +++ P +NLDKLWSLV + L+ EK+T KAPVID+ + G++K+LG+G+LP +PVIVKA++FS++AE+KIKK GG C+L+A Sbjct: 3 NIKRKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHL--RRQHKFRPEINLDKLWSLVGAEKFAELEKEKST-KAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKKAGGVCLLSA 149
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|2500273|sp|Q27021.1|RL27A_TENMO (RecName: Full=60S ribosomal protein L27a) HSP 1 Score: 210.305 bits (534), Expect = 3.766e-67 Identity = 101/150 (67.33%), Postives = 124/150 (82.67%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTK-KAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 MST+KKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGG HHHRINFDKYHPGYFGK+GMRN+H+ N +++ P +NLDKLW+LVSEQTR KY+ + + KAPVID+ +AG++K+LGKG ++K F + E+KIK VGGACVL+A Sbjct: 1 MSTHKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKLGMRNYHLRRN--SKWAPAINLDKLWTLVSEQTRSKYQNHPEGKAPVIDIVKAGYYKLLGKGACLTNLSLLKPSFSLNRLEDKIKAVGGACVLSA 148
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|225712762|gb|ACO12227.1| (60S ribosomal protein L27a [Lepeophtheirus salmonis] >gi|225713762|gb|ACO12727.1| 60S ribosomal protein L27a [Lepeophtheirus salmonis] >gi|290462325|gb|ADD24210.1| 60S ribosomal protein L27a [Lepeophtheirus salmonis] >gi|290562277|gb|ADD38535.1| 60S ribosomal protein L27a [Lepeophtheirus salmonis]) HSP 1 Score: 276.559 bits (706), Expect = 9.197e-91 Identity = 130/149 (87.25%), Postives = 139/149 (93.29%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 MSTNKKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHA+ NQYCP VNLDKLWSLVSEQTR KY K+ KKAPVIDV++AG+FKVLGKG LP QPVIVKAR FSR+AEEKIK VGGAC+L+A Sbjct: 1 MSTNKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHAHTINQYCPSVNLDKLWSLVSEQTREKYAKDKKKAPVIDVTKAGYFKVLGKGLLPNQPVIVKARLFSRKAEEKIKSVGGACILSA 149
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|961374964|gb|ALS04226.1| (60S ribosomal protein L27a [Acartia pacifica]) HSP 1 Score: 270.781 bits (691), Expect = 1.611e-88 Identity = 128/149 (85.91%), Postives = 137/149 (91.95%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 MSTNKKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVH N NQ+CP +NLDKLW+LV E+TR+K K+TK APVID S AG+FKVLGKG LPKQPVIVKARFFSR+AEEKIK VGGACVLTA Sbjct: 1 MSTNKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHPNVSNQFCPAINLDKLWTLVPEETRVKAAKDTKTAPVIDCSGAGYFKVLGKGILPKQPVIVKARFFSRRAEEKIKAVGGACVLTA 149
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|1325300846|ref|XP_023332015.1| (60S ribosomal protein L27a-like [Eurytemora affinis]) HSP 1 Score: 270.011 bits (689), Expect = 4.164e-88 Identity = 130/149 (87.25%), Postives = 133/149 (89.26%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 MST KKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVH N N YCP +NLDKLWSLVSEQTR KY KAPVID SRAG+FKVLGKG LPKQPVIVKARFFSR AEEKIK VGGACVLTA Sbjct: 1 MSTCKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHPNISNNYCPAINLDKLWSLVSEQTRTKYADVKDKAPVIDCSRAGYFKVLGKGVLPKQPVIVKARFFSRVAEEKIKAVGGACVLTA 149
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|961375786|gb|ALS04637.1| (60S ribosomal protein L27a [Pseudodiaptomus poplesia] >gi|961376096|gb|ALS04792.1| 60S ribosomal protein L27a [Pseudodiaptomus poplesia] >gi|1148369128|gb|AQS22800.1| 60S ribosomal protein l27a [Pseudodiaptomus poplesia]) HSP 1 Score: 268.085 bits (684), Expect = 1.962e-87 Identity = 128/149 (85.91%), Postives = 134/149 (89.93%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 MST KKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVH N +CP +NLDKLW+LVSEQTR KY + KAPVID SRAGFFKVLGKG LPKQPVIVKARFFSR+AEEKIK VGGACVLTA Sbjct: 1 MSTQKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHPNMSIHHCPAINLDKLWTLVSEQTRKKYADSKDKAPVIDCSRAGFFKVLGKGVLPKQPVIVKARFFSRRAEEKIKAVGGACVLTA 149
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|961376548|gb|ALS05018.1| (60S ribosomal protein L27a [Centropages dorsispinatus]) HSP 1 Score: 267.7 bits (683), Expect = 2.385e-87 Identity = 127/149 (85.23%), Postives = 134/149 (89.93%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 MST KKKTRKLRGHVSHGHGR+GKHRKHPGGRGN+GGQHHHRINFDKYHPGYFGKVGMRNFHVH N N +CP +NLDKLW+LVSEQTR KY T KAPVID +RAG FKVLGKG LPKQPVIVKARFFSR+AEEKIK VGGACVLTA Sbjct: 1 MSTCKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNSGGQHHHRINFDKYHPGYFGKVGMRNFHVHPNISNNFCPAINLDKLWTLVSEQTRTKYASVTDKAPVIDCNRAGIFKVLGKGALPKQPVIVKARFFSRRAEEKIKAVGGACVLTA 149
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|961374966|gb|ALS04227.1| (60S ribosomal protein L27a [Acartia pacifica]) HSP 1 Score: 265.774 bits (678), Expect = 1.779e-86 Identity = 127/149 (85.23%), Postives = 136/149 (91.28%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 MSTNKKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVH N NQ+ P +NLDKLW+LV E+TR+K K+TK APVID S AG+FKVLGKG LPKQPVIVKARFFSR+AEEKIK VGGACVLTA Sbjct: 1 MSTNKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHPNVSNQFRPAINLDKLWTLVPEETRVKAAKDTKTAPVIDCSGAGYFKVLGKGILPKQPVIVKARFFSRRAEEKIKAVGGACVLTA 149
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|225718318|gb|ACO15005.1| (60S ribosomal protein L27a [Caligus clemensi]) HSP 1 Score: 261.922 bits (668), Expect = 5.408e-85 Identity = 129/149 (86.58%), Postives = 139/149 (93.29%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 MSTNKKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHA+ NQYCP VNLDKLWSLVS+QTR KY K+ KKAPVIDV++AG+FKVLGKG LP QPVIVKAR FSR+AEEKIK VGGAC+L+A Sbjct: 1 MSTNKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHAHTANQYCPSVNLDKLWSLVSDQTRDKYAKDKKKAPVIDVTKAGYFKVLGKGLLPDQPVIVKARLFSRKAEEKIKSVGGACILSA 149
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|961375782|gb|ALS04635.1| (60S ribosomal protein L27a [Pseudodiaptomus poplesia] >gi|961375784|gb|ALS04636.1| 60S ribosomal protein L27a [Pseudodiaptomus poplesia]) HSP 1 Score: 259.61 bits (662), Expect = 4.257e-84 Identity = 125/149 (83.89%), Postives = 132/149 (88.59%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 MST KKKTRKLRGHVSHGHGR+GKHRKH GGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFH H+N Y P +NLDKLW+LVSEQTR KY + KAPVID SRAG FKVLGKG+LPKQPVIVKARFFSR+AEEKIK VGGACVLTA Sbjct: 1 MSTCKKKTRKLRGHVSHGHGRIGKHRKHSGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHKHSNLAVYYSPTINLDKLWTLVSEQTRKKYADSKDKAPVIDCSRAGIFKVLGKGSLPKQPVIVKARFFSRRAEEKIKAVGGACVLTA 149
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|961376440|gb|ALS04964.1| (60S ribosomal protein L27a [Pseudodiaptomus poplesia]) HSP 1 Score: 256.529 bits (654), Expect = 7.836e-83 Identity = 124/149 (83.22%), Postives = 129/149 (86.58%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 MST KKTRKL GHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVH N +CP +NLDKLW+LVSEQT KY KAPVID S AGFFKVLGKG LPKQPVIVKARFFSR+AEEKIK VGGACVLTA Sbjct: 1 MSTQNKKTRKLPGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHPNMSIHHCPAINLDKLWTLVSEQTMKKYADRKDKAPVIDCSIAGFFKVLGKGVLPKQPVIVKARFFSRRAEEKIKAVGGACVLTA 149
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|559373032|gb|AHB12474.1| (60S Ribosomal Protein L27A [Pantala flavescens]) HSP 1 Score: 254.603 bits (649), Expect = 3.840e-82 Identity = 120/149 (80.54%), Postives = 135/149 (90.60%), Query Frame = 0 Query: 176 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKVGGACVLTA 324 MST+KKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGG HHHRINFDKYHPGYFGKVGMRNFH+ N+ +CP +NLDKLW+LVSEQTRLKY++N +KAPVIDV +AG++KVLGKG LPKQPVIV+A+FFSR AEEKIK VGG CVL A Sbjct: 1 MSTHKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLRKNK--LWCPSINLDKLWTLVSEQTRLKYKENKEKAPVIDVVKAGYYKVLGKGRLPKQPVIVRAKFFSRSAEEKIKAVGGCCVLQA 147 The following BLAST results are available for this feature:
BLAST of 60s ribosomal protein l27a vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of 60s ribosomal protein l27a vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of 60s ribosomal protein l27a vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold646_size120253:54957..65514+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold646_size120253-snap-gene-0.18 ID=maker-scaffold646_size120253-snap-gene-0.18|Name=60s ribosomal protein l27a|organism=Tigriopus kingsejongensis|type=gene|length=10558bp|location=Sequence derived from alignment at scaffold646_size120253:54957..65514+ (Tigriopus kingsejongensis)back to top Synonyms
The feature '60s ribosomal protein l27a' has the following synonyms
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