AGAP009045-PA, maker-scaffold671_size114370-snap-gene-0.30 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of AGAP009045-PA vs. SwissProt
Match: gi|74949008|sp|Q9W3T5.1|SMIM4_DROME (RecName: Full=Small integral membrane protein 4) HSP 1 Score: 77.7962 bits (190), Expect = 1.488e-19 Identity = 38/68 (55.88%), Postives = 50/68 (73.53%), Query Frame = 0 Query: 12 LLQRLPGR-RFGVYRILPLFFFMGAALEYTMIHWHVGEVNFYRTYKKKMALDIVLKEERLVQSGQARA 78 LL PG+ RFGVYR LPLFF +GA LE++MI+W VGE NFYRT+K++ A + V +++ L QARA Sbjct: 11 LLDSWPGKKRFGVYRFLPLFFLLGAGLEFSMINWTVGETNFYRTFKRRQAKNYVEEQQHL----QARA 74
BLAST of AGAP009045-PA vs. SwissProt
Match: gi|205830728|sp|Q8C1Q6.2|SMIM4_MOUSE (RecName: Full=Small integral membrane protein 4; AltName: Full=Small nucleolar RNA host gene 8) HSP 1 Score: 57.3806 bits (137), Expect = 1.705e-11 Identity = 25/49 (51.02%), Postives = 35/49 (71.43%), Query Frame = 0 Query: 13 LQRLPGR-RFGVYRILPLFFFMGAALEYTMIHWHVGEVNFYRTYKKKMA 60 LQR+PG+ RFG+YR LP FF +G A+E+ MI VG+ FY Y++K + Sbjct: 11 LQRVPGKQRFGIYRFLPFFFVLGGAMEWIMIKVRVGQETFYDVYRRKAS 59
BLAST of AGAP009045-PA vs. SwissProt
Match: gi|205830727|sp|Q8WVI0.2|SMIM4_HUMAN (RecName: Full=Small integral membrane protein 4) HSP 1 Score: 56.225 bits (134), Expect = 3.458e-11 Identity = 24/51 (47.06%), Postives = 35/51 (68.63%), Query Frame = 0 Query: 11 NLLQRLPGR-RFGVYRILPLFFFMGAALEYTMIHWHVGEVNFYRTYKKKMA 60 +LQR+PG+ RFG+YR LP FF +G +E+ MI VG+ FY Y++K + Sbjct: 9 RILQRVPGKQRFGIYRFLPFFFVLGGTMEWIMIKVRVGQETFYDVYRRKAS 59
BLAST of AGAP009045-PA vs. nr
Match: gi|826437081|ref|XP_012529535.1| (PREDICTED: small integral membrane protein 4 [Monomorium pharaonis]) HSP 1 Score: 92.4337 bits (228), Expect = 7.053e-23 Identity = 43/65 (66.15%), Postives = 53/65 (81.54%), Query Frame = 0 Query: 6 NERLANLLQRLPGRRFGVYRILPLFFFMGAALEYTMIHWHVGEVNFYRTYKKKMALDIVLKEERL 70 + RL LL +LPG+RFG YR+LPLFFF GAALEY+MIHW+VGEVNFY+ YK+K ++V EERL Sbjct: 5 SRRLKKLLHKLPGKRFGEYRLLPLFFFFGAALEYSMIHWYVGEVNFYKIYKRKRVEELV--EERL 67
BLAST of AGAP009045-PA vs. nr
Match: gi|118791522|ref|XP_319797.3| (AGAP009045-PA [Anopheles gambiae str. PEST] >gi|116117642|gb|EAA15012.4| AGAP009045-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 87.4261 bits (215), Expect = 7.698e-21 Identity = 41/73 (56.16%), Postives = 56/73 (76.71%), Query Frame = 0 Query: 1 MIVRRNERLANLLQRLPGRR-FGVYRILPLFFFMGAALEYTMIHWHVGEVNFYRTYKKKMALDIVLKEERLVQ 72 MI+R+++ L LL R PG+R G+YR LP+FF +GAALE++MIHW VGE NFY T+KK+ A +IV ++ RL Q Sbjct: 1 MIIRKSKTLKELLDRWPGKRTLGIYRFLPIFFGLGAALEFSMIHWRVGETNFYNTFKKRQAKEIVEEKLRLHQ 73
BLAST of AGAP009045-PA vs. nr
Match: gi|568259434|gb|ETN67355.1| (hypothetical protein AND_000840 [Anopheles darlingi]) HSP 1 Score: 86.6557 bits (213), Expect = 1.339e-20 Identity = 41/71 (57.75%), Postives = 53/71 (74.65%), Query Frame = 0 Query: 1 MIVRRNERLANLLQRLPGRR-FGVYRILPLFFFMGAALEYTMIHWHVGEVNFYRTYKKKMALDIVLKEERL 70 MI+R++ R+ LL PG+R GVYR LP+FF +GAALE++MIHW VGE NFY T+KK+ A DIV + RL Sbjct: 1 MIIRKSARVKKLLDLWPGKRALGVYRFLPIFFGLGAALEFSMIHWRVGETNFYNTFKKRQAKDIVAERLRL 71
BLAST of AGAP009045-PA vs. nr
Match: gi|322788544|gb|EFZ14172.1| (hypothetical protein SINV_02837, partial [Solenopsis invicta]) HSP 1 Score: 85.1149 bits (209), Expect = 5.338e-20 Identity = 39/66 (59.09%), Postives = 51/66 (77.27%), Query Frame = 0 Query: 8 RLANLLQRLPGRRFGVYRILPLFFFMGAALEYTMIHWHVGEVNFYRTYKKKMALDIVLKEERLVQS 73 RL L+ +LPG+RFG YR+LPLFF +GA LE++MI+W VGEVNFY+TYK + ++V EERL Q Sbjct: 4 RLKRLINKLPGKRFGEYRLLPLFFVLGAVLEFSMINWQVGEVNFYKTYKHRKVEELV--EERLKQE 67
BLAST of AGAP009045-PA vs. nr
Match: gi|1173904534|gb|OQR72836.1| (small integral membrane protein-like [Tropilaelaps mercedesae]) HSP 1 Score: 83.1889 bits (204), Expect = 8.506e-19 Identity = 35/68 (51.47%), Postives = 52/68 (76.47%), Query Frame = 0 Query: 1 MIVRRNERLANLLQRLPGRR-FGVYRILPLFFFMGAALEYTMIHWHVGEVNFYRTYKKKMALDIVLKE 67 M+ +RN ++ LL ++PG++ FG YR +P+FFF GAALE++MIHW VGE NFY+TYKK++ + +E Sbjct: 34 MLRQRNSPISRLLDKIPGKQLFGPYRFMPIFFFAGAALEFSMIHWAVGETNFYKTYKKRVVRETAERE 101
BLAST of AGAP009045-PA vs. nr
Match: gi|157116410|ref|XP_001658463.1| (small integral membrane protein 4 [Aedes aegypti] >gi|1218210966|ref|XP_021712289.1| small integral membrane protein 4 [Aedes aegypti] >gi|108876487|gb|EAT40712.1| AAEL007576-PA [Aedes aegypti]) HSP 1 Score: 82.0333 bits (201), Expect = 1.103e-18 Identity = 40/71 (56.34%), Postives = 53/71 (74.65%), Query Frame = 0 Query: 1 MIVRRNERLANLLQRLPGRRF-GVYRILPLFFFMGAALEYTMIHWHVGEVNFYRTYKKKMALDIVLKEERL 70 M RR++ L +LL PG+++ G+YR LPLFF +GA LE++MIHW VG+ NFY T+KK+ A DIV EERL Sbjct: 1 MRFRRSQTLKHLLDLWPGKKYLGIYRFLPLFFGLGATLEFSMIHWRVGDTNFYNTFKKRQAKDIV--EERL 69
BLAST of AGAP009045-PA vs. nr
Match: gi|815770592|ref|XP_012235448.1| (PREDICTED: small integral membrane protein 4 [Linepithema humile]) HSP 1 Score: 81.6481 bits (200), Expect = 1.311e-18 Identity = 39/64 (60.94%), Postives = 48/64 (75.00%), Query Frame = 0 Query: 8 RLANLLQRLPGRR-FGVYRILPLFFFMGAALEYTMIHWHVGEVNFYRTYKKKMALDIVLKEERL 70 + + +LPG+R FG YR LP+FF GAALEYTMIHWHVGEVNFY+TYK++ + L EERL Sbjct: 6 KFKRFIDKLPGKRIFGNYRFLPIFFVFGAALEYTMIHWHVGEVNFYKTYKRRRVEE--LAEERL 67
BLAST of AGAP009045-PA vs. nr
Match: gi|1121097602|ref|XP_019539278.1| (PREDICTED: small integral membrane protein 4-like [Aedes albopictus] >gi|1121115247|ref|XP_019547142.1| PREDICTED: small integral membrane protein 4 [Aedes albopictus]) HSP 1 Score: 81.6481 bits (200), Expect = 1.672e-18 Identity = 40/71 (56.34%), Postives = 52/71 (73.24%), Query Frame = 0 Query: 1 MIVRRNERLANLLQRLPGRRF-GVYRILPLFFFMGAALEYTMIHWHVGEVNFYRTYKKKMALDIVLKEERL 70 M RR++ L LL PG+++ G+YR LPLFF +GA LE++MIHW VG+ NFY T+KK+ A DIV EERL Sbjct: 1 MRFRRSQTLKQLLDLWPGKKYLGIYRFLPLFFGLGATLEFSMIHWRVGDTNFYNTFKKRQAKDIV--EERL 69
BLAST of AGAP009045-PA vs. nr
Match: gi|1000208899|gb|KXJ79223.1| (hypothetical protein RP20_CCG001956 [Aedes albopictus]) HSP 1 Score: 81.6481 bits (200), Expect = 1.709e-18 Identity = 40/71 (56.34%), Postives = 52/71 (73.24%), Query Frame = 0 Query: 1 MIVRRNERLANLLQRLPGRRF-GVYRILPLFFFMGAALEYTMIHWHVGEVNFYRTYKKKMALDIVLKEERL 70 M RR++ L LL PG+++ G+YR LPLFF +GA LE++MIHW VG+ NFY T+KK+ A DIV EERL Sbjct: 1 MRFRRSQTLKQLLDLWPGKKYLGIYRFLPLFFGLGATLEFSMIHWRVGDTNFYNTFKKRQAKDIV--EERL 69
BLAST of AGAP009045-PA vs. nr
Match: gi|675881176|ref|XP_009026090.1| (hypothetical protein HELRODRAFT_114577 [Helobdella robusta] >gi|555692556|gb|ESN95788.1| hypothetical protein HELRODRAFT_114577 [Helobdella robusta]) HSP 1 Score: 81.2629 bits (199), Expect = 1.915e-18 Identity = 38/63 (60.32%), Postives = 47/63 (74.60%), Query Frame = 0 Query: 6 NERLANLLQRLPGR-RFGVYRILPLFFFMGAALEYTMIHWHVGEVNFYRTYKKKMALDIVLKE 67 + +LA LL R PG+ RFG+YR LP+FF +GA LE++MI W VGEVNFY YKKK A I+L E Sbjct: 4 SNKLAVLLNRWPGKERFGMYRFLPVFFVLGAVLEFSMIKWQVGEVNFYSIYKKKQAQKIILAE 66 The following BLAST results are available for this feature:
BLAST of AGAP009045-PA vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 0
BLAST of AGAP009045-PA vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 3
BLAST of AGAP009045-PA vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold671_size114370:28126..29154+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold671_size114370-snap-gene-0.30 ID=maker-scaffold671_size114370-snap-gene-0.30|Name=AGAP009045-PA|organism=Tigriopus kingsejongensis|type=gene|length=1029bp|location=Sequence derived from alignment at scaffold671_size114370:28126..29154+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'AGAP009045-PA' has the following synonyms
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