probable nuclear hormone receptor hr38-like, maker-scaffold743_size103610-snap-gene-0.17 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of probable nuclear hormone receptor hr38-like vs. L. salmonis genes
Match: EMLSAG00000013004 (supercontig:LSalAtl2s:LSalAtl2s98:942409:953748:1 gene:EMLSAG00000013004 transcript:EMLSAT00000013004 description:"augustus_masked-LSalAtl2s98-processed-gene-9.1") HSP 1 Score: 540.421 bits (1391), Expect = 0.000e+0 Identity = 267/350 (76.29%), Postives = 311/350 (88.86%), Query Frame = 0 Query: 28 SLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVE-ELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVT---DRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 SLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKP+SP E PPSPPVSLITALVRAHIDTSPD N+LD+SQ++E S+E E ++KE ++ NEA KI QFYH+LTSSIEVIR FC+RIPGI+++ +DR+LLFQ++CLELF LRLAYR PDSD++TFC+G+VLH +QC+ +FGDWL I EF+R LH+M+LDI AF+CLC L LV +RHGLSDPK+VE++++K+INSLKDHVTYNP+AQKK+ Y +RIL+RL LRSLS+QGLQRIF+LK ED VP P +IEKMFASSIPF Sbjct: 406 SLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPTESPPSPPVSLITALVRAHIDTSPDM--NNLDYSQFVETSIEDERDSKENMLANEAIKIGQFYHVLTSSIEVIRNFCERIPGISELSLNDRDLLFQTSCLELFVLRLAYRSNPDSDRYTFCNGVVLHVSQCEQTFGDWLNGINEFARGLHSMELDISAFSCLCGLILVNGKDERHGLSDPKKVESIENKIINSLKDHVTYNPEAQKKEHYMTRILDRLPALRSLSMQGLQRIFFLKWEDLVPAPPLIEKMFASSIPF 753
BLAST of probable nuclear hormone receptor hr38-like vs. L. salmonis genes
Match: EMLSAG00000001919 (supercontig:LSalAtl2s:LSalAtl2s132:616435:622808:1 gene:EMLSAG00000001919 transcript:EMLSAT00000001919 description:"augustus_masked-LSalAtl2s132-processed-gene-6.5") HSP 1 Score: 153.295 bits (386), Expect = 9.982e-43 Identity = 104/377 (27.59%), Postives = 183/377 (48.54%), Query Frame = 0 Query: 13 PPLTRSPASGDLKATSLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEAS-VEEL--ETKEGLVVNEAT-----------KIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHR-NQCQHSFGDWLGSIM-EFSRTLHAMDLDIQAFACLCALTLVT-DRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLK-----MEDTVPVPAVIEKMF 367 PP P + L + C++CGD A+ +HYGV +CEGCKGFFKRTV+K Y C +++C +DKR+RNRCQ+CR+ KCL GM +E V+ + +G G + + + + +++S + + +EA V E+ +T E L+++ + +IQ+F I + ++ +P +++ D+ L + EL LA+ +D +G ++ R N + G ++ E + M +D CL A+ L D GLSD +VENL+ KV +L+++ + + + F+++L RL LRS+ ++ L+ +F+ K + D P+ I+ + Sbjct: 73 PPNNTYPPNHPLSGSKHFCSICGDRASGKHYGVYSCEGCKGFFKRTVRKELTYACRENRDCVIDKRQRNRCQYCRYMKCLDTGMKREAVQEERHRGSNGPNHNNNNN---------NNNNNSRNSEEVESSTSGGGGDMPIERIIEAEDVGEMKQDTSEFLLLDNNSSMSGGGSIGDMEIQRFGLAKKRIIHQLIEWAKLVPHFSELKVEDQVTLIRGGWNELLVAGLAFXSIKLNDGILLGNGTIVTRENAHEAGVGHIFDRVLVELIAKMKEMQMDKAELGCLRAIILFNPDAKGLSDVTKVENLREKVYATLEEYTRSVHENEPSR--FAKLLLRLPALRSIGLKCLEHLFFYKLVGDYLNDGNPLEKFIQSLL 438
BLAST of probable nuclear hormone receptor hr38-like vs. L. salmonis genes
Match: EMLSAG00000009969 (supercontig:LSalAtl2s:LSalAtl2s651:302705:304416:-1 gene:EMLSAG00000009969 transcript:EMLSAT00000009969 description:"maker-LSalAtl2s651-augustus-gene-2.5") HSP 1 Score: 144.436 bits (363), Expect = 4.891e-39 Identity = 115/366 (31.42%), Postives = 176/366 (48.09%), Query Frame = 0 Query: 18 SPASGDLKATSLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRL--PSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQF-YHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQP-DSDQFTFCHGLVLHRNQCQH----SFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLV-TDRHGLSDPKRVENLQSKVINSLKDHV-TYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 SP+SG +T +LC VCGD ++ +HYG TCEGCK FFKR V+++ + C + K+CPVD+ RN+CQ CRF+KCL +GM KE V+ KGR P S P+ S ++ + + P ++ SQY + + G+ I +F LL S+IE R IPG ++ +D+ L + ELF L + P G LH + +F D + E L A+ +D ACL A+ L TD GL+D +E LQ K +L D+ ++P K F ++L RL LR++S ++++F++++ P+ +I M F Sbjct: 62 SPSSGTNSSTEILCVVCGDKSSGKHYGQFTCEGCKSFFKRCVRRSLTFQCRSKKSCPVDQHHRNQCQHCRFKKCLNMGMKKEAVQ----KGRTTTTSAPIFNYSNDLFSPNTGSSYLSTYISLLLRAEPYTT------SQYGQLQMAASNNIIGI-----DNICEFAARLLFSAIEWARN----IPGFPELQITDQVGLLRMVWSELFVLNASQCHMPLHVAPLLVAXG--LHASPLAADRXVAFMDHIRVFQEQVEKLKALQVDAAEXACLKAIVLFSTDPPGLTDITLIEQLQEKSQCALDDYCKIHHP---TKPSRFGKLLLRLPSLRTVSSAVIEQLFFIRLVGKTPIETLIRDMLLCGTAF 403
BLAST of probable nuclear hormone receptor hr38-like vs. L. salmonis genes
Match: EMLSAG00000009941 (supercontig:LSalAtl2s:LSalAtl2s649:484085:485655:-1 gene:EMLSAG00000009941 transcript:EMLSAT00000009941 description:"maker-LSalAtl2s649-snap-gene-4.11") HSP 1 Score: 126.716 bits (317), Expect = 2.530e-33 Identity = 96/351 (27.35%), Postives = 157/351 (44.73%), Query Frame = 0 Query: 25 KATSLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQP-PSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTL-VTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 +++ + C VCGD ++ +HYG TCEGCK FFKR+V++N Y C KNCPVD+ RN+CQ CR +KC +GM +E V +RGR+P P+ S P+S T L ++I + P Y + ++ ++ + LL S++E R IPG ++ +D+ L + ELF E L + +D + C+ A+ L TD GL D + +E LQ K +L+++ Q + F ++L RL LR++S ++++F++++ P+ +I M S F Sbjct: 77 ESSDINCVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYQCRGSKNCPVDQHHRNQCQHCRLKKCFKMGMRREAV-------QRGRVPPTPQGVFGLGFSSDPLSGTTYL-SSYISMLLRAEP-------YPTSRYGQMPMPTNGMIGIENICEFAARLLFSAVEWTRS----IPGFPELQVTDQVALLRLVWSELF----------------------------------------EQVEKLKGLHVDSAEYVCMKAIVLFTTDAPGLCDMQVIEQLQEKSQCALEEYCRSQYPNQPTR--FGKLLLRLPSLRTVSSTVIEQLFFVRLVGKTPIETLIRDMILSGNNF 366
BLAST of probable nuclear hormone receptor hr38-like vs. L. salmonis genes
Match: EMLSAG00000008071 (supercontig:LSalAtl2s:LSalAtl2s47:304551:317770:1 gene:EMLSAG00000008071 transcript:EMLSAT00000008071 description:"snap_masked-LSalAtl2s47-processed-gene-3.10") HSP 1 Score: 124.405 bits (311), Expect = 8.292e-32 Identity = 75/223 (33.63%), Postives = 112/223 (50.22%), Query Frame = 0 Query: 31 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSK-PRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHL-LTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQ 251 C VCGD A+ HYGV +CE CK FFKRT+Q N +Y A C ++KRRR CQ CRFQKCL +GM+KE VR D ++G R + SP QPP L++ P++ ++D T + + + FY+ L +IE + +IPG +++ +D+ L QS+ E+ L L YR P + + + + L +Q + Sbjct: 271 CLVCGDIASGFHYGVSSCEACKAFFKRTIQGNIEYTXPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESSPYIQPPPKKTLEDNKLLQVLRHCEPEAFLVNMDM------------TLPNYKIRTISTLSDFYNRELIGTIE----WAKQIPGFSNLTINDQMKLLQSSWSEILVLSLVYRSLPYNGKISLTNNFSLDESQAR 477
BLAST of probable nuclear hormone receptor hr38-like vs. L. salmonis genes
Match: EMLSAG00000008543 (supercontig:LSalAtl2s:LSalAtl2s527:163002:172818:1 gene:EMLSAG00000008543 transcript:EMLSAT00000008543 description:"maker-LSalAtl2s527-augustus-gene-1.53") HSP 1 Score: 120.168 bits (300), Expect = 7.650e-30 Identity = 55/105 (52.38%), Postives = 66/105 (62.86%), Query Frame = 0 Query: 12 PPPLTRSPASGDLK------ATSLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRR 110 PPP+ +S GD SL+C +C D A HYG+ TCEGCKGFFKRTVQ Y C+AD C ++K +RNRCQ+CRFQKCL GMV VR D + G R Sbjct: 258 PPPIHQSGGPGDNNNPSSQPQQSLVCMICEDRATGLHYGIITCEGCKGFFKRTVQNKRIYTCVADGECEINKAQRNRCQYCRFQKCLQKGMVLAAVREDRMPGGR 362
BLAST of probable nuclear hormone receptor hr38-like vs. L. salmonis genes
Match: EMLSAG00000007361 (supercontig:LSalAtl2s:LSalAtl2s418:374353:376789:1 gene:EMLSAG00000007361 transcript:EMLSAT00000007361 description:"maker-LSalAtl2s418-augustus-gene-3.13") HSP 1 Score: 117.472 bits (293), Expect = 3.403e-29 Identity = 91/371 (24.53%), Postives = 177/371 (47.71%), Query Frame = 0 Query: 8 LGPPPPPLTRSPASGDLKATSLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVN-EATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRN------QCQHSFGDWLG--SIMEFSRTLHAMDLDIQAFACLCALTLVTDRH--GLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMF 367 +G PPPL + CAVCGD A +HYG +C+GCKGFF+R+V+K Y C ++ C V+K +RN C++CR + C+ GM K V+ + R R+ + ++ + S +TAL+ A S NS+ + T+E ++ N + I+ H + + V+ ++ I ++ D+ L ++ E + +A R + + +++ ++ + Q + +G + E T +++D ACL A+ D H GL D ++++ L+S++ +L+D++ N + + F IL + L++++ Q +++I + K V V +++++M Sbjct: 136 IGVLPPPLAPNNIQN--------CAVCGDRATGKHYGAASCDGCKGFFRRSVRKERVYGCRQNRACIVNKDKRNNCRYCRLKMCIKAGMKKSAVQNE-----RDRISCRKKTSAKDMNSANELTVTALLNAD-KVGQKSLLNSIVGGNI---NTNNFITEENVLANKQLASIEDIGHSMKEQLIVLVEWAKHIKAFCELSVDDQVRLLRAHSGEHLLMGVAKRSMNLNGILLLGNDMIIVKDERKWNSESQDAAVRSIGVRVMNELVDTFKRINIDDAELACLKAIVFF-DPHVRGLHDVEQIKKLRSQIHTNLEDYI--NDRLYESRGRFGEILLSIQSLQAITWQMIEQISFAK-NFGVGVDSLLQEML 485
BLAST of probable nuclear hormone receptor hr38-like vs. L. salmonis genes
Match: EMLSAG00000005090 (supercontig:LSalAtl2s:LSalAtl2s269:306853:308464:-1 gene:EMLSAG00000005090 transcript:EMLSAT00000005090 description:"augustus_masked-LSalAtl2s269-processed-gene-3.0") HSP 1 Score: 115.161 bits (287), Expect = 1.678e-28 Identity = 101/380 (26.58%), Postives = 160/380 (42.11%), Query Frame = 0 Query: 30 LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVV---RT------------------------DSLKGRRG-----------RLPS-KPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSI---EVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHR-NQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQY--FSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIE 364 LC VCGD A+ HY CEGCKGFF+R++ KN+ Y C + +C +D R +CQ CR +KC A GM E V RT + G+ G RL S KP P+E+ LI LV + P+ D ++ + + E E+ ++ F H+ +I ++I +F +PG ++ D+ L + E+ LR A R +SD + + N + G+ + F R + M +PKRVE +Q +++L+ +V N +KK Q F+++L LT LRSL + + F LK+++ P ++E Sbjct: 172 LCLVCGDRASGYHYNALACEGCKGFFRRSITKNSNYTCKWNGDCEIDMYMRRKCQACRLKKCYATGMRAECVVPERTCIQKRQAKAAAAAAAXXDTTVDPKSNNNGKNGSISIDMASFPKRLSSTKPLKPEEE------ELINRLVYFQEEY---EHPSEADLNRVYHVPMHSTNSSES----ESDRL--FRHMTEMTILTVQLIVEFSKHLPGFQNLCRDDQINLLKGCSSEVMMLRGARRYDAESDSIVYATNYPFTKENYAKAGLGN--DELFRFCRAMSRM----------------------KEPKRVEKIQEIYVDALQAYVMAN---RKKNQMVTFAKLLYVLTELRSLGINNSELCFSLKLKNRKLPPFLME 509
BLAST of probable nuclear hormone receptor hr38-like vs. L. salmonis genes
Match: EMLSAG00000008902 (supercontig:LSalAtl2s:LSalAtl2s554:572309:581835:1 gene:EMLSAG00000008902 transcript:EMLSAT00000008902 description:"maker-LSalAtl2s554-snap-gene-5.6") HSP 1 Score: 114.005 bits (284), Expect = 4.920e-28 Identity = 48/84 (57.14%), Postives = 59/84 (70.24%), Query Frame = 0 Query: 30 LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRL 113 LC VCGD + HYG+ TCE CKGFFKRTVQ Y C+AD++C +DK +R RC +CRFQKCL VGM E VR D ++G R + Sbjct: 185 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVADRSCVIDKTQRKRCPYCRFQKCLDVGMKLEAVRHDRMRGGRNKF 268
BLAST of probable nuclear hormone receptor hr38-like vs. L. salmonis genes
Match: EMLSAG00000004451 (supercontig:LSalAtl2s:LSalAtl2s231:945915:949068:1 gene:EMLSAG00000004451 transcript:EMLSAT00000004451 description:"snap_masked-LSalAtl2s231-processed-gene-9.18") HSP 1 Score: 103.605 bits (257), Expect = 1.864e-24 Identity = 88/344 (25.58%), Postives = 140/344 (40.70%), Query Frame = 0 Query: 31 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRA------HIDTSPDSSPN---------SLDFSQYMEASVEELETKEGLVVNEATK------IQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYR-------IQPDSDQ-FTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVT------DRHGLSDPKRVENLQSKVINSLKDHVTYN-PDAQKKQQYFSRILERLTPLR 338 C VCGD + HYG+ +CE CKGFFKRTVQ YVCL CPV R +C CRF KCL +GM E +R D +G R P S + I + R + +T + S S++ + S+ L + ++ +Q L + + ++C +P +IL D+ L +A EL Y+ I+ D+ L N+C + ++ FS L + +D + L + L+T D GL + +V Q +V+ +L+ + ++ P K F +L R+ L+ Sbjct: 155 CPVCGDKISGFHYGIFSCESCKGFFKRTVQNKKNYVCLRGSQCPVTISTRKKCPACRFDKCLNIGMKLEAIREDRTRGGRSTYQCSYNLPTTGVCSTNSTTIPTIKRESRGDDHNTETKVNQSSGIPVLLHEIMSVEHLWFWSTSMPSLSLNNSSSNTDTSQESPSNPVQTLTLLADKRLYKLVRWCKSLPLFKNILVDDQITLLINAWCELLVFSCCYKSVDSPGFIRLSQDKSLNLESAKSLGVNEC-------IEKMLNFSDQLRRLKVDHYEYVSLKVILLLTSAPLYVDATGLKEVDQVRESQEQVVQALQSYTNFHYPSMPNK---FGELLLRMPELQ 488
BLAST of probable nuclear hormone receptor hr38-like vs. SwissProt
Match: gi|17380507|sp|P10826.2|RARB_HUMAN (RecName: Full=Retinoic acid receptor beta; Short=RAR-beta; AltName: Full=HBV-activated protein; AltName: Full=Nuclear receptor subfamily 1 group B member 2; AltName: Full=RAR-epsilon) HSP 1 Score: 200.29 bits (508), Expect = 8.238e-59 Identity = 118/343 (34.40%), Postives = 185/343 (53.94%), Query Frame = 0 Query: 31 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVR-AHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHS-FGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLV-TDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASS 370 C VC D ++ HYGV CEGCKGFF+R++QKN Y C DKNC ++K RNRCQ+CR QKC VGM KE VR D + ++ + SK + + + +T +R AH +T P+ +Y S + + L + + +F L T I I +F R+PG + +D+ L ++ACL++ LR+ R P+ D TF GL L+R Q ++ FG + F+ L +++D L A+ L+ DR L +P +V+ LQ ++ +LK ++ + K F +IL ++T LRS+S +G +R+ LKME +P +I++M +S Sbjct: 88 CFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRND--RNKKKKETSKQECTESYEMTAELDDLTEKIRKAHQET----FPSLCQLGKYTTNSSADHRVRLDLGLWD-----KFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRPS--KPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENS 417
BLAST of probable nuclear hormone receptor hr38-like vs. SwissProt
Match: gi|1173170|sp|P18516.2|RARG_NOTVI (RecName: Full=Retinoic acid receptor gamma; Short=RAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group B member 3; AltName: Full=Retinoic acid receptor delta; Short=RAR-delta) HSP 1 Score: 199.904 bits (507), Expect = 2.989e-58 Identity = 120/345 (34.78%), Postives = 180/345 (52.17%), Query Frame = 0 Query: 31 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHS-FGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLV-TDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 C VC D ++ HYGV +CEGCKGFF+R++QKN Y C DKNC ++K RNRCQ+CR QKC VGM KE VR D K ++ E PP +LI + +AH +T P+ +Y S + + L + +F L T I I +F R+PG + +D+ L ++ACL++ LR+ R P+ D TF GL L+R Q ++ FG + F+ L +++D L A+ L+ DR L +P++V+ LQ ++ +LK + K F R+L ++T LR +S +G +R LKME P+P +I +M + F Sbjct: 143 CFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKEIKEEVVTDSYEMPPEME-ALIQKVSKAHQET----FPSLCQLGKYTTNSSADHRVQLDLGL-----WHKFSELATKCIIKIVEFAKRLPGFATLTIADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFAEQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALKIYARRR--RPNKPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEAF 475
BLAST of probable nuclear hormone receptor hr38-like vs. SwissProt
Match: gi|28558767|sp|P28699.2|RARG_XENLA (RecName: Full=Retinoic acid receptor gamma; Short=RAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group B member 3) HSP 1 Score: 199.134 bits (505), Expect = 3.314e-58 Identity = 125/351 (35.61%), Postives = 183/351 (52.14%), Query Frame = 0 Query: 31 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGR-----LPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHS-FGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLV-TDRHGLSDPKRVENLQSKVINSLKDHV-TYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 C VC D ++ HYGV +CEGCKGFF+R++QKN Y C DKNC ++K RNRCQFCR QKC VGM KE VR D K ++ LP P E LI + +AH +T P+ +Y S + + L + + +F L T I I +F R+PG + +D+ L +SACL++ LR+ R P+ D TF GL L+R Q ++ FG + F+ L +++D L A+ L+ DR L +P++VE LQ ++ +LK + PD K F R+L ++T LR +S +G +R LK+E P+P +I +M + F Sbjct: 110 CFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCQINKVTRNRCQFCRLQKCFQVGMSKEAVRNDRNKKKKEIKEEVVLPDSYEMPPEME-----ELIQKVSKAHQET----FPSLCQLGKYTTNSSADQRVQLDLGLWD-----KFSELSTKCIIKIVEFAKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFSFADQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVEKLQEPLLEALKFYARRRRPD---KPYMFPRMLMKITDLRGISTKGAERAITLKLEIPGPMPPLIREMLENPEAF 443
BLAST of probable nuclear hormone receptor hr38-like vs. SwissProt
Match: gi|133498|sp|P13631.1|RARG_HUMAN (RecName: Full=Retinoic acid receptor gamma; Short=RAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group B member 3) HSP 1 Score: 196.052 bits (497), Expect = 2.867e-57 Identity = 119/340 (35.00%), Postives = 184/340 (54.12%), Query Frame = 0 Query: 31 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPV-SLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHS-FGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLV-TDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMF 367 C VC D ++ HYGV +CEGCKGFF+R++QKN Y C DKNC ++K RNRCQ+CR QKC VGM KE VR D + ++ + + SP SP + LIT + +AH +T P+ +Y S + + L + + +F L T I I +F R+PG + +D+ L ++ACL++ LR+ R P+ D TF GL L+R Q ++ FG + F+ L +++D L A+ L+ DR L +P++V+ LQ ++ +L+ + +Q F R+L ++T LR +S +G +R LKME P+P +I +M Sbjct: 90 CFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKEAVRND--RNKKKKEVKEEGSPDSYELSPQLEELITKVSKAHQET----FPSLCQLGKYTTNSSADHRVQLDLGLWD-----KFSELATKCIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQP--YMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREML 416
BLAST of probable nuclear hormone receptor hr38-like vs. SwissProt
Match: gi|166899090|sp|P18911.3|RARG_MOUSE (RecName: Full=Retinoic acid receptor gamma; Short=RAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group B member 3) HSP 1 Score: 196.052 bits (497), Expect = 3.600e-57 Identity = 119/340 (35.00%), Postives = 184/340 (54.12%), Query Frame = 0 Query: 31 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPV-SLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHS-FGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLV-TDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMF 367 C VC D ++ HYGV +CEGCKGFF+R++QKN Y C DKNC ++K RNRCQ+CR QKC VGM KE VR D + ++ + + SP SP + LIT + +AH +T P+ +Y S + + L + + +F L T I I +F R+PG + +D+ L ++ACL++ LR+ R P+ D TF GL L+R Q ++ FG + F+ L +++D L A+ L+ DR L +P++V+ LQ ++ +L+ + +Q F R+L ++T LR +S +G +R LKME P+P +I +M Sbjct: 90 CFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKEAVRND--RNKKKKEVKEEGSPDSYELSPQLEELITKVSKAHQET----FPSLCQLGKYTTNSSADHRVQLDLGLWD-----KFSELATKCIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQP--YMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREML 416
BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|657600386|gb|AID52854.1| (hormone receptor 38 [Tigriopus japonicus]) HSP 1 Score: 663.685 bits (1711), Expect = 0.000e+0 Identity = 340/373 (91.15%), Postives = 360/373 (96.51%), Query Frame = 0 Query: 1 LSKMRLPLGPPPPPLTRSPASGDLKATSLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 LSKMRLPLGPPPPPLTRSP GD K+ SLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLD+SQY++ASVEELETKEGLV NEA KIQQFYHLLTSSIEVIRKFCDRIPGIN+++ SDRE LFQS CLELF LRLAYRIQPDSDQFTFC+G+VLHRNQCQHSFG+WLG+I+EFSRTLHAM+LDIQAF+CLCALTLV +RHG+SDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRIL+RL+PLRSLSVQGLQRIFYLKMED VPVP +IEK+FASSIPF Sbjct: 218 LSKMRLPLGPPPPPLTRSPG-GDPKSGSLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDYSQYVDASVEELETKEGLVANEAAKIQQFYHLLTSSIEVIRKFCDRIPGINELVPSDREHLFQSTCLELFVLRLAYRIQPDSDQFTFCNGMVLHRNQCQHSFGEWLGTIVEFSRTLHAMELDIQAFSCLCALTLVNERHGVSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILDRLSPLRSLSVQGLQRIFYLKMEDQVPVPDLIEKLFASSIPF 589
BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|1042761287|gb|ANQ45198.1| (hormone receptor 38 [Lepeophtheirus salmonis salmonis]) HSP 1 Score: 546.199 bits (1406), Expect = 0.000e+0 Identity = 267/347 (76.95%), Postives = 311/347 (89.63%), Query Frame = 0 Query: 28 SLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVE-ELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 SLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKP+SP E PPSPPVSLITALVRAHIDTSPD N+LD+SQ++E S+E E ++KE ++ NEA KI QFYH+LTSSIEVIR FC+RIPGI+++ +DR+LLFQ++CLELF LRLAYR PDSD++TFC+G+VLH +QC+ +FGDWL I EF+R LH+M+LDI AF+CLC L LV +RHGLSDPK+VE++++K+INSLKDHVTYNP+AQKK+ Y +RIL+RL LRSLS+QGLQRIF+LK ED VP P +IEKMFASSIPF Sbjct: 406 SLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPTESPPSPPVSLITALVRAHIDTSPDM--NNLDYSQFVETSIEDERDSKENMLANEAIKIGQFYHVLTSSIEVIRNFCERIPGISELSLNDRDLLFQTSCLELFVLRLAYRSNPDSDRYTFCNGVVLHVSQCEQTFGDWLNGINEFARGLHSMELDISAFSCLCGLILVNERHGLSDPKKVESIENKIINSLKDHVTYNPEAQKKEHYMTRILDRLPALRSLSMQGLQRIFFLKWEDLVPAPPLIEKMFASSIPF 750
BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|1036837|gb|AAC46926.1| (DHR38, partial [Drosophila melanogaster]) HSP 1 Score: 494.967 bits (1273), Expect = 3.807e-170 Identity = 249/350 (71.14%), Postives = 291/350 (83.14%), Query Frame = 0 Query: 24 LKATSLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 L+A S LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLADKNCPVDKRRRNRCQFCRFQKCL VGMVKEVVRTDSLKGRRGRLPSKP+SPQE PPSPP+SLITALVR+H+DT+PD P+ LD+S Y E S+ +EA K+QQFY LLTSS++VI++F ++IPG D+L D+ELLFQSA LELF LRLAYR + D + FC+G VLHR QC SFG+WL IMEFSR+LH +++DI AFACLCALTL+T+RHGL +PK+VE LQ K+I SL+DHVTYN +AQKKQ YFSR+L +L LRSLSVQGLQRIFYLK+ED VP PA+IE MF +++PF Sbjct: 210 LQAPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRFQKCLVVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPISLITALVRSHVDTTPD--PSCLDYSHYEEQSM-----------SEADKVQQFYQLLTSSVDVIKQFAEKIPGYFDLLPEDQELLFQSASLELFVLRLAYRARIDDTKLIFCNGTVLHRTQCLRSFGEWLNDIMEFSRSLHNLEIDISAFACLCALTLITERHGLREPKKVEQLQMKIIGSLRDHVTYNAEAQKKQHYFSRLLGKLPELRSLSVQGLQRIFYLKLEDLVPAPALIENMFVTTLPF 546
BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|158296777|ref|XP_317123.4| (AGAP008334-PA, partial [Anopheles gambiae str. PEST] >gi|157014874|gb|EAA12420.4| AGAP008334-PA, partial [Anopheles gambiae str. PEST]) HSP 1 Score: 501.516 bits (1290), Expect = 4.875e-170 Identity = 249/346 (71.97%), Postives = 293/346 (84.68%), Query Frame = 0 Query: 28 SLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 S LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLADK CPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKP+SPQE PPSPPVS+ITALVRAH+DT+PD + SLD+SQY E E ++ EA K+QQFY+LLT+S++VI+ F D++PG ND+ D+ELLFQSA LELF LRL+YR + D + TFC+G+VLHR+QCQ SFGDWL +I+EFS++LHAM +DI AFACLCALTLVT+RHGL +PK+VE LQ K+I+SL+DHVTYN +AQ+K YFSR+L +L LRSLSVQGLQRIFYLK+ED VP P +IE MF +S+PF Sbjct: 395 SQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSMITALVRAHVDTTPDLA--SLDYSQYREPGQNEP------IITEAEKVQQFYNLLTTSVDVIKHFADKLPGYNDLSVEDQELLFQSASLELFVLRLSYRARSDDTKMTFCNGVVLHRHQCQRSFGDWLNAILEFSKSLHAMQIDISAFACLCALTLVTERHGLREPKKVEQLQMKIISSLRDHVTYNSEAQRKPHYFSRLLGKLPELRSLSVQGLQRIFYLKLEDLVPAPPLIENMFLASLPF 732
BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|2133651|pir||S58238 (DHR38 protein - fruit fly (Drosophila melanogaster) >gi|929562|emb|CAA61534.1| DHR38 [Drosophila melanogaster]) HSP 1 Score: 494.582 bits (1272), Expect = 6.304e-170 Identity = 249/350 (71.14%), Postives = 291/350 (83.14%), Query Frame = 0 Query: 24 LKATSLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 L+A S LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLADKNCPVDKRRRNRCQFCRFQKCL VGMVKEVVRTDSLKGRRGRLPSKP+SPQE PPSPP+SLITALVR+H+DT+PD P+ LD+S Y E S+ +EA K+QQFY LLTSS++VI++F ++IPG D+L D+ELLFQSA LELF LRLAYR + D + FC+G VLHR QC SFG+WL IMEFSR+LH +++DI AFACLCALTL+T+RHGL +PK+VE LQ K+I SL+DHVTYN +AQKKQ YFSR+L +L LRSLSVQGLQRIFYLK+ED VP PA+IE MF +++PF Sbjct: 215 LQAPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRFQKCLVVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPISLITALVRSHVDTTPD--PSCLDYSHYEEQSM-----------SEADKVQQFYQLLTSSVDVIKQFAEKIPGYFDLLPEDQELLFQSASLELFVLRLAYRARIDDTKLIFCNGTVLHRTQCLRSFGEWLNDIMEFSRSLHNLEIDISAFACLCALTLITERHGLREPKKVEQLQMKIIGSLRDHVTYNAEAQKKQHYFSRLLGKLPELRSLSVQGLQRIFYLKLEDLVPAPALIENMFVTTLPF 551
BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|194192070|gb|EDX05646.1| (GD21688 [Drosophila simulans]) HSP 1 Score: 494.582 bits (1272), Expect = 7.203e-170 Identity = 249/350 (71.14%), Postives = 291/350 (83.14%), Query Frame = 0 Query: 24 LKATSLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 L+A S LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLADKNCPVDKRRRNRCQFCRFQKCL VGMVKEVVRTDSLKGRRGRLPSKP+SPQE PPSPP+SLITALVR+H+DT+PD P+ LD+S Y E S+ +EA K+QQFY LLTSS++VI++F ++IPG D+L D+ELLFQSA LELF LRLAYR + D + FC+G VLHR QC SFG+WL IMEFSR+LH +++DI AFACLCALTL+T+RHGL +PK+VE LQ K+I SL+DHVTYN +AQKKQ YFSR+L +L LRSLSVQGLQRIFYLK+ED VP PA+IE MF +++PF Sbjct: 220 LQAPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRFQKCLVVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPISLITALVRSHVDTTPD--PSCLDYSHYEEQSM-----------SEADKVQQFYQLLTSSVDVIKQFAEKIPGYFDLLPEDQELLFQSASLELFVLRLAYRARIDDTKLIFCNGTVLHRTQCLRSFGEWLNDIMEFSRSLHNLEIDISAFACLCALTLITERHGLREPKKVEQLQMKIIGSLRDHVTYNAEAQKKQHYFSRLLGKLPELRSLSVQGLQRIFYLKLEDLVPAPALIENMFVTTLPF 556
BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|1135078485|ref|XP_019892054.1| (PREDICTED: probable nuclear hormone receptor HR38 [Musca domestica]) HSP 1 Score: 507.294 bits (1305), Expect = 8.056e-170 Identity = 250/346 (72.25%), Postives = 297/346 (85.84%), Query Frame = 0 Query: 28 SLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 S LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKP+SPQE PPSPPVSLITALVR+H+DT+PD P+ LD+SQY E +L LV++EA K+QQFY+LLT+S++VI++F ++IPG +D+ D+ELL QSA LELF LRL+YR + D + TFC+G+VLHR+QCQ SFGDWL I+EFS++LH++++DI AFACLCALTL+TDRHGL +PK+VE LQ K+I SL+DHVTYN +AQKK YFSR+L +L LRSLSVQGLQRIFYLK+ED VP PA+IE MF +S+PF Sbjct: 598 SQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALVRSHVDTTPD--PSCLDYSQYREPGQADLP----LVMSEAEKVQQFYNLLTTSVDVIKQFAEKIPGYSDLTQEDQELLLQSASLELFVLRLSYRARVDDTKMTFCNGIVLHRSQCQRSFGDWLNGILEFSKSLHSLEIDISAFACLCALTLITDRHGLREPKKVEQLQMKIIGSLRDHVTYNAEAQKKPHYFSRLLGKLPELRSLSVQGLQRIFYLKLEDLVPAPALIENMFVASLPF 937
BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|1279748360|ref|XP_022919139.1| (probable nuclear hormone receptor HR38 isoform X1 [Onthophagus taurus]) HSP 1 Score: 496.508 bits (1277), Expect = 8.804e-170 Identity = 255/367 (69.48%), Postives = 297/367 (80.93%), Query Frame = 0 Query: 7 PLGPPPPPLTRSPASGDLKATSLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 P GP PP + S LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLADK CPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKP+SPQE PPSPPVSLITALVRAH+DT+PD + +LD+SQY E S E +++EA KIQQFY LLT+S++VIR F ++IPG D+ D+ELLFQSA LELF LRLAYR P+ + TFC+G+VL + QCQ SFGDWL +IMEF +LH+M++DI AFACLCAL LVTDRHGL +P RVE LQ K+I+SLKDHVTYN +AQ+KQ YFSR+L +L LRSLS+QGLQRIFYLK+ED VP P +IE+MFA+++PF Sbjct: 261 PKGPTPP------------SPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALVRAHVDTTPDLA--NLDYSQYCEPSPIEP------MISEAEKIQQFYTLLTTSVDVIRNFAEKIPGFQDLCPEDKELLFQSASLELFVLRLAYRTHPNDTKLTFCNGVVLDKQQCQRSFGDWLHTIMEFCNSLHSMEIDISAFACLCALDLVTDRHGLKEPSRVEQLQMKIISSLKDHVTYNAEAQRKQHYFSRLLGKLPELRSLSIQGLQRIFYLKLEDLVPAPPLIERMFAATLPF 607
BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|1279748362|ref|XP_022919140.1| (probable nuclear hormone receptor HR38 isoform X2 [Onthophagus taurus]) HSP 1 Score: 496.123 bits (1276), Expect = 8.907e-170 Identity = 255/367 (69.48%), Postives = 297/367 (80.93%), Query Frame = 0 Query: 7 PLGPPPPPLTRSPASGDLKATSLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 P GP PP + S LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLADK CPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKP+SPQE PPSPPVSLITALVRAH+DT+PD + +LD+SQY E S E +++EA KIQQFY LLT+S++VIR F ++IPG D+ D+ELLFQSA LELF LRLAYR P+ + TFC+G+VL + QCQ SFGDWL +IMEF +LH+M++DI AFACLCAL LVTDRHGL +P RVE LQ K+I+SLKDHVTYN +AQ+KQ YFSR+L +L LRSLS+QGLQRIFYLK+ED VP P +IE+MFA+++PF Sbjct: 258 PKGPTPP------------SPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALVRAHVDTTPDLA--NLDYSQYCEPSPIEP------MISEAEKIQQFYTLLTTSVDVIRNFAEKIPGFQDLCPEDKELLFQSASLELFVLRLAYRTHPNDTKLTFCNGVVLDKQQCQRSFGDWLHTIMEFCNSLHSMEIDISAFACLCALDLVTDRHGLKEPSRVEQLQMKIISSLKDHVTYNAEAQRKQHYFSRLLGKLPELRSLSIQGLQRIFYLKLEDLVPAPPLIERMFAATLPF 604
BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|1321295962|ref|XP_023308563.1| (probable nuclear hormone receptor HR38 [Lucilia cuprina]) HSP 1 Score: 504.597 bits (1298), Expect = 3.183e-169 Identity = 250/346 (72.25%), Postives = 296/346 (85.55%), Query Frame = 0 Query: 28 SLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 S LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKP+SPQE PPSPPVSLITALVR+H+DT+PD P+ LD+SQY E S + +V++EA K+QQFY+LLT+S++VI++F ++IPG D+ A D+ELL QSA LELF LRL+YR + D + TFC+G+VLHR+QCQ SFGDWL I+EFS++LH +++DI AFACLCALTLVT+RHGL +PK+VE LQ K+I SL+DHVTYN +AQKK YFSR+L +L LRSLSVQGLQRIFYLK+ED VP PA+IE MF +S+PF Sbjct: 557 SQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALVRSHVDTTPD--PSCLDYSQYREPS----QAASPVVMSEAEKVQQFYNLLTTSVDVIKQFAEKIPGYLDLTAEDQELLLQSASLELFVLRLSYRARVDDTKMTFCNGIVLHRSQCQRSFGDWLNGILEFSKSLHNLEIDISAFACLCALTLVTERHGLREPKKVEQLQMKIIGSLRDHVTYNAEAQKKPHYFSRLLGKLPELRSLSVQGLQRIFYLKLEDLVPAPALIENMFVASLPF 896 The following BLAST results are available for this feature:
BLAST of probable nuclear hormone receptor hr38-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of probable nuclear hormone receptor hr38-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of probable nuclear hormone receptor hr38-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold743_size103610:125..6045- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold743_size103610-snap-gene-0.17 ID=maker-scaffold743_size103610-snap-gene-0.17|Name=probable nuclear hormone receptor hr38-like|organism=Tigriopus kingsejongensis|type=gene|length=5921bp|location=Sequence derived from alignment at scaffold743_size103610:125..6045- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'probable nuclear hormone receptor hr38-like' has the following synonyms
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