abc subfamily abcd, maker-scaffold96_size378025-snap-gene-0.23 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of abc subfamily abcd vs. L. salmonis genes
Match: EMLSAG00000005996 (supercontig:LSalAtl2s:LSalAtl2s324:163173:165128:-1 gene:EMLSAG00000005996 transcript:EMLSAT00000005996 description:"maker-LSalAtl2s324-augustus-gene-1.35") HSP 1 Score: 430.639 bits (1106), Expect = 1.239e-144 Identity = 242/601 (40.27%), Postives = 361/601 (60.07%), Query Frame = 0 Query: 4 TAHYGFNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIR--AGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAF--HQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPK-SELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARN-IRLVSVGHRESLKRYHRQILAIGLSDGHWTLEDI 598 + YGFN +L RF+ L +++F A+ +++ + +LEQ + +G++ G++ + L D + F A + ++ + M + R+ + +L+V WRRSLT LH +YF FY L LDNPDQR+ +D LV YG+I++++++ PF I+YY Y +Y +GP GP +F FFL T +NK L++PVV VE +EGDFRF+H IR+ +ESLAF + E+ + D L LC Q+ L L+LAT F Y SI S+L++ IP+++G Y G + EL+ ++SE AFV + L+ +F++LV +A VSRLA VTHR+ E +E L+Q K N + S + S V+ + ++S+ P S L+ +LNL L + +LLI G SS GK+SLLRV+ GLW+ ++GS F V F+ Q PFFT+G+LR Q+ YPL+V+ + Q I+ L + GLGDLI R G+LD +P SW + LSPGE QR+A IR FH P++ LDEATSALS+D+E+L Y++ N I L+SVGHR+SLK++H + L I LS+G ++L +I Sbjct: 9 SKSYGFNLQFLHRFWHLQSLIFTDRINIGLAI--IILLICSLEQLVMYKIGMIPGQFIRALVSEDESKFVRAIVLSLIIVCFMTLVLSARILTSELLSVSWRRSLTRCLHSLYFFNTGFYTLK-----LDNPDQRIASDAECLVSIYGQILSEILLSPFVISYYIYDSYRGRGSGPYGPLIIFGFFLFGTFINKTLLTPVVNSGVEVRSKEGDFRFKHAEIRSQSESLAFLGQMGSFAEASRVDHLLEILCEAQRKLVLATYRLNLATNFFDYGASIISYLIVGIPVYNGFYKGLNVEELSGIISETAFVNIMLISKFSRLVDLAGKVSRLASVTHRVAEFVEKLSQEKIKDL--KDFDNHAESSPLLMNDSDDSSVSDETVLTLSNLSIGLPDISRKTLVSNLNLELKIGDNLLITGSSSCGKTSLLRVLRGLWNEKSGSYK--FGRKTVIFISQKPFFTNGSLRRQVTYPLEVVSSVSHDQFDIWIKMKLIKFGLGDLIDRVNGNLDAEPDKSWSEILSPGETQRMAIIRSLFHSPEILILDEATSALSLDMEELCYREVSYNNLITLISVGHRDSLKKFHSKHLQI-LSEGQYSLHEI 597
BLAST of abc subfamily abcd vs. L. salmonis genes
Match: EMLSAG00000005788 (supercontig:LSalAtl2s:LSalAtl2s3118:3124:4893:1 gene:EMLSAG00000005788 transcript:EMLSAT00000005788 description:"augustus_masked-LSalAtl2s3118-processed-gene-0.0") HSP 1 Score: 417.927 bits (1073), Expect = 7.515e-140 Identity = 233/602 (38.70%), Postives = 353/602 (58.64%), Query Frame = 0 Query: 4 TAHYGFNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVL--DTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSV--SVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDL-DPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCL--ARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLEDI 598 T +Y N R +LHAI+ V L+G+ LEQ++ GLV+G + +VL +D GF+T + + I + V K R+YV ++L+V WRR+LT LH +YF +Y++NVL + GLDNPDQRMT+DV YGE+IA LI+ PFTI +YT+ AY R+G GP G+F++F++ +N LMSPV + E+ EGDFRF+H+ +R AE +AF SA +ES+K ++ L L +Q S++ ++ LDL F Y G+I S+L+IA+P+F+G YD +L +S+N+FVCM L++ +QLV +A+ + +AGVTHR+ EL+E L K N D D +I+++++ + +P + VLI +LNL + +LI G SS+GK+SLLR+I GLW GS+S F + FL Q P TDG+L + ++YP + + P T + LT L L + DL + W D LSPGEMQR+ FIR+F+H+P++ LDE+T++L ++E +LY+ + I ++SVGHR+SL++YH + L + +G W L+ I Sbjct: 10 TGNYRINWKLFVRIGKLHAII--SRNLINIFVTICLLGVCILEQYVGYKTGLVAGAFXEVLLNKDTEGFKTTAIHSFGVILGIAVVKTVRMYVAKILSVFWRRTLTTNLHNLYFDADSYYKVNVLIKELGLDNPDQRMTSDVDTFCLVYGEMIARLIISPFTIGFYTWDAYTRSGWIGPVGVFIYFILGCFVNLFLMSPVSQRVFFMEKNEGDFRFKHMFLREKAEEIAFSNSAIIESIKTNKLLKSLIKSQLSVYTWEILLDLWINIFDYVGAIISYLIIAVPVFTGFYDSLDQAKLGNQISQNSFVCMTLIYNLSQLVDLASKFANMAGVTHRMIELVEILE---------KHNSNPCFFKDNAICTNDKDPHMFETMINLENIILKIPSPTTPRVLIDNLNLNIKTGDRILITGASSSGKTSLLRLIRGLWPTVEGSIS--FFTDSIEFLSQRPLMTDGSLLQNMIYPSE---XPISPDLTW-FKDQLTRFNLDHLYKQ----YDLFQYQNRWEDILSPGEMQRICFIRVFYHRPQVVLLDESTASLPTNIEAMLYEYLIITCPKITILSVGHRDSLRKYHMKELQLQ-CNGEWELKQI 589
BLAST of abc subfamily abcd vs. L. salmonis genes
Match: EMLSAG00000002016 (supercontig:LSalAtl2s:LSalAtl2s1361:43077:48755:-1 gene:EMLSAG00000002016 transcript:EMLSAT00000002016 description:"augustus_masked-LSalAtl2s1361-processed-gene-0.2") HSP 1 Score: 51.2174 bits (121), Expect = 9.001e-7 Identity = 55/222 (24.77%), Postives = 91/222 (40.99%), Query Frame = 0 Query: 392 PKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDK--------LSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQ----KCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLEDIPQD 601 PK E ++Q +NL + + +++G S +GK++L+ + TGSV + P V L Q P+ + T+++ I+ + R E +IA C D+D D LS G+ QRLA R + + F+D S+L + +++ K L + R V + E L HR + L DG + QD Sbjct: 738 PKCETNVLQSINLEIKTGSLTIVIGPSGSGKTALISSLIEEMDRITGSVKWNV-PDTVALLGQRPWLLNTTIKDNIL-----------------LGRPFKEKRYKKVIAACDLQTDIDLLPHGDDTEIGERGVLLSGGQRQRLAIARCLYSKSYCTFMDAPFSSLDSKITSHVFEEGVLKILLKRRRTVFLT-TERLDFLHRADHIVALKDGMIKAQGTIQD 940
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|338817849|sp|O89016.2|ABCD4_MOUSE (RecName: Full=ATP-binding cassette sub-family D member 4; AltName: Full=PMP70-related protein; Short=P70R; AltName: Full=Peroxisomal membrane protein 1-like; Short=PXMP1-L; AltName: Full=Peroxisomal membrane protein 69; Short=PMP69) HSP 1 Score: 482.256 bits (1240), Expect = 3.171e-163 Identity = 262/589 (44.48%), Postives = 356/589 (60.44%), Query Frame = 0 Query: 14 LRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPN--VIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVS--NHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLEDI 598 ++RF R+ + FP W++ +F L+ + LEQ + VGL+ +YY VLG +D GF+ TL AV I K + +L V WR+ LT LH +YF +Y LNVL +DNPDQR++ DV + + + LI+ PFT+ YYTY + G GP +F +F+V T++NK LM P+V V+QE+ EGDFRF+H+ IR +AE AF+++ VE ++ D RL RL TQ+ L R+L L + TF Y GSI S++VIAIPIFSG+Y SP EL+ +VS+NAFVC+YL+ FTQL+ ++ T+S +AG THRIGEL EAL M +A+ D+ PG + P+ + VS++AP S+ LI+DL+L + SLLI G + GK+SLLRV+ GLW GSV F P V FLPQ PFFTDGTLREQ++YPL+ I + + I R L GL L+AR GG LD W+W D LSPGEMQRL+F RLF+ QPK A LDEATSAL+ + E LY+ + +SVGHR SL+++H +L + G W L I Sbjct: 21 VQRFVRIQKVFFPSWSSQNVLMFMTLLCVTLLEQLVIYQVGLIPSQYYGVLGNKDLDGFKALTLLAVTLIVLNSTLKSFDQFTCNLLYVSWRKDLTEHLHHLYFRARVYYTLNVLRDDIDNPDQRISQDVERFCRQLSSVTSKLIISPFTLTYYTYQCFQSTGWLGPVSIFGYFIVGTMVNKTLMGPIVTKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGLVEHMRTDRRLQRLLQTQRELMSRELWLYIGINTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKNAFVCIYLISCFTQLIDLSTTLSDVAGYTHRIGELQEALLDMSRKSQDCEALGESEWDLDKT----PGCPTTEPSDTAFLLDRVSILAPSSDKPLIKDLSLKICEGQSLLITGNTGTGKTSLLRVLGGLWEGMKGSVQMLADFGPHGVLFLPQKPFFTDGTLREQVIYPLKEIYPDSGSADDERIVRFLELAGLSSLVARTGG-LDQQVDWNWYDVLSPGEMQRLSFARLFYLQPKYAVLDEATSALTEEAESELYRIGQQLGMTFISVGHRPSLEKFHSWVLRLH-GGGSWELTRI 603
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|6831464|sp|O14678.1|ABCD4_HUMAN (RecName: Full=ATP-binding cassette sub-family D member 4; AltName: Full=PMP70-related protein; Short=P70R; AltName: Full=Peroxisomal membrane protein 1-like; Short=PXMP1-L; AltName: Full=Peroxisomal membrane protein 69; Short=PMP69) HSP 1 Score: 478.019 bits (1229), Expect = 1.864e-161 Identity = 259/590 (43.90%), Postives = 360/590 (61.02%), Query Frame = 0 Query: 13 YLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTP--NVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVS--NHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLEDI 598 +L+RF ++ +LFP W++ + +F L+ L LEQ++ VGL+ +YY VLG +D GF+T T AV I K + +L V WR+ LT LHR+YF +Y LNVL +DNPDQR++ DV + + + LI+ PFT+ YYTY + G GP +F +F++ T++NK LM P+V V QE+ EGDFRF+H+ IR +AE AF+++ VE ++ D RL RL TQ+ L ++L L + TF Y GSI S++VIAIPIFSG+Y SP EL+ +VS+NAFVC+YL+ FTQL+ ++ T+S +AG THRIG+L E L M + + D PPG + P ++ VS+ AP S+ LI+DL+L + SLLI G + GK+SLLRV+ GLW+ GSV F P V FLPQ PFFTDGTLREQ++YPL+ + + + I R L GL +L+AR G LD W+W D LSPGEMQRL+F RLF+ QPK A LDEATSAL+ ++E LY+ + +SVGHR+SL+++H +L + G W L I Sbjct: 20 FLQRFLQILKVLFPSWSSQNALMFLTLLCLTLLEQFVIYQVGLIPSQYYGVLGNKDLEGFKTLTFLAVMLIVLNSTLKSFDQFTCNLLYVSWRKDLTEHLHRLYFRGRAYYTLNVLRDDIDNPDQRISQDVERFCRQLSSMASKLIISPFTLVYYTYQCFQSTGWLGPVSIFGYFILGTVVNKTLMGPIVMKLVHQEKLEGDFRFKHMQIRVNAEPAAFYRAGHVEHMRTDRRLQRLLQTQRELMSKELWLYIGINTFDYLGSILSYVVIAIPIFSGVYGDLSPAELSTLVSKNAFVCIYLISCFTQLIDLSTTLSDVAGYTHRIGQLRETLLDMSLKSQDCEILGESEWGLDT----PPGWPAAEPADTAFLLERVSISAPSSDKPLIKDLSLKISEGQSLLITGNTGTGKTSLLRVLGGLWTSTRGSVQMLTDFGPHGVLFLPQKPFFTDGTLREQVIYPLKEVYPDSGSADDERILRFLELAGLSNLVARTEG-LDQQVDWNWYDVLSPGEMQRLSFARLFYLQPKYAVLDEATSALTEEVESELYRIGQQLGMTFISVGHRQSLEKFHSLVLKL-CGGGRWELMRI 603
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|2492597|sp|Q55774.1|Y182_SYNY3 (RecName: Full=Uncharacterized ABC transporter ATP-binding protein sll0182) HSP 1 Score: 218.009 bits (554), Expect = 2.546e-61 Identity = 165/518 (31.85%), Postives = 253/518 (48.84%), Query Frame = 0 Query: 95 YVTRMLTVGWRRSLTMALHRMYFARIKFYRL--NVLDTGLDNPDQRMTADVAALVQTYGEIIADLI-----VVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDE----MRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLL---TEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLEDI 598 Y+ + L V WR+ LT YF +Y L N T +DNPDQR+T D+ + + + D++ ++ FT YT S + G G + + T++ + + ++R+ EQ R E +FR+ V +R +AES+AF++ +E + +RLL L Q + L ++YF + +++IA +G D G +AQ V L Q+ ++ A +R+GE E+L +G + + S D R+G + +++V++ P S +L++DL+L + LLIMG S +GKSSLLR IAGLW G++ D+ FLPQ P+ GTLREQ++YP Q AD + LL +V L DL R GG LD +W LS GE QR+A R+F +QP+ A LDEATSAL ++ E LY +SVGHR +L+ +HRQ L + ++G W + I Sbjct: 182 YLRQKLGVLWRQWLTEHFLGRYFKGRSYYHLDSNSAYTLIDNPDQRITQDIQSFTGVTLDFLLDILDSILTLISFTAILYTISQTLMWGLIG------YAVFGTVVAIAIGTRLIRINYEQLRLEANFRYGLVRVRDNAESIAFYRGEGLERKQVTDRLLGAIRNFNLLIIWQALISLFQLGYNYFTRLIPYIIIAPLYLAGDLDF---GAIAQASLAFGMVLSALSLVTNQI----QNITEFAASINRLGEFYESL-----NGPSNELERPESTGFDHNVITTRIGA---------TVALENVTLSPPNSSRILVRDLSLAVAPGNHLLIMGPSGSGKSSLLRAIAGLWDSGQGTIERP-ELADLLFLPQRPYMILGTLREQLIYP--------SAQSIADDDFLLETLNKVNLPDLAERFGG---LDSLENWSSVLSLGEQQRIALARVFINQPRYAILDEATSALDVNNEAELYHALTDLGTTFISVGHRPTLRNFHRQCLEVQ-AEGRWQISPI 659
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|75018090|sp|Q8T8P3.1|ABCD2_DICDI (RecName: Full=ABC transporter D family member 2; AltName: Full=ABC transporter ABCD.2) HSP 1 Score: 219.55 bits (558), Expect = 2.652e-61 Identity = 170/655 (25.95%), Postives = 292/655 (44.58%), Query Frame = 0 Query: 10 NGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLD-AVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTG--LDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLC------ATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLY--DGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTP---------------------------------------------NVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERL-LTEVGLGDLIARCGGSLDLDPKWSWPDK------LSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLEDIPQD 601 + ++ RR ++ I+ P + L L L++ + ++G+ + L R W L A+ I A V + Y T ML + +R+ L+ +H+ Y + FY+ + L +DN DQR+T+D+ + + L + +T + G P MF +F+VS L K++M P RLT +Q EG++R H + T+AE +AF+ +R E +++ L T + + L Y SI + + +PI++G+ G EL + N + + L QLV + V+ +AG T R+ EL+E + + G + I + + + + P D+ T + I ++VS+++P+ +L L+++L+ + N +++I G + +GKSSL R++ LW G+V D+ F+PQ P+ GTLR+QI+YP D+++L +T+ L L+A +L + +W+W D LS G+ QR+A RLF+H+P+ A LDE TSA+S ++E +Y+ C I L +V HR L+ YH +L G W I D Sbjct: 96 DAVFFRRLAKIIRIVIPSLKSKEFLSLLYLTALLFARTMLSVSIAEIAGKNAQNLVARKWKEMRNGVLKFALVSIPASFVNASLK-YETDMLALRFRKRLSEYVHKEYLEGVNFYKASHLGGADRIDNADQRVTSDIEQFCNSMSSLYTTLFKPFLDLVLFTRKLVVVMGWGSPLLMFSYFIVSGFLKKLIMPPFGRLTAKQSELEGNYRTVHQRLITNAEEIAFYDGSRKE-----RQIINLSFGDIYNHTGYVSYLKCLVGIFDGFLVKYCASIVGYGCMVLPIYTGIRGSSGKDSTELTKDYIRNTQLMVALSQAIGQLVLLGNKVTLMAGYTSRVSELLEMIKSIKERGTSQFTIVHEDDVPNPLTNSPVNDKYDTSVDMSSWLEDWRKRSDQTRIVKRQQSNRSSASGATTVYGGGTFVEGDFIKFENVSIVSPEGKL-LVENLDFQVMPNQNVMITGPNGSGKSSLFRILGELWPLHCGTVIKPRKE-DILFVPQKPYLVLGTLRDQIIYP----------HSHDDMKKLGVTDDDLQHLLATVDPNLTIIRQWNWDDTKDWFTALSGGQKQRIAMARLFYHRPQYAILDECTSAVSDEVEGKIYETCKKLGITLFTVSHRPQLRAYHDYVLLFN-GRGGWEWSKIDHD 731
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|338817848|sp|P55096.2|ABCD3_MOUSE (RecName: Full=ATP-binding cassette sub-family D member 3; AltName: Full=68 kDa peroxisomal membrane protein; Short=PMP68; AltName: Full=70 kDa peroxisomal membrane protein; Short=PMP70) HSP 1 Score: 217.238 bits (552), Expect = 4.862e-61 Identity = 144/511 (28.18%), Postives = 249/511 (48.73%), Query Frame = 0 Query: 100 LTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFS-YFGSIASFLVIAIPIFSGLYDGY---SPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPP-----GDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLEDIPQD 601 L + +R LT L+ Y +Y++ LD + NPDQ +T DV + ++ ++L I Y + G GP+ M + LVS L L P+ ++T+ +++ EG++R+ + + T++E +AF+ + E +L + + ++ + Y ++ +LV++ P + + + EL + ++ + + + ++V ++RLAG T RI EL++ L + G + + ++ E P G+ +T N+I V + P + +LIQDL+ + ++LI G + GKSSL RV+ LW P G +F++PQ P+ T GTLR+Q++YP + R ++ L V LG ++ R GG D W D LS GE QR+A RLF+H+P+ A LDE TSA+S+D+ED +Y C I L +V HR+SL ++H L + G++ + I +D Sbjct: 150 LKLCFRVRLTRYLYEEYLQAFTYYKMGNLDNRIANPDQLLTQDVEKFCNSVVDLYSNLSKPFLDIVLYIFKLTSAIGAQGPASMMAYLLVSGLFLTRLRRPIGKMTIMEQKYEGEYRYVNSRLITNSEEIAFYNGNKREKQTIHSVFRKLVEHLHNFIFFRFSMGFIDSIIAKYVATVVGYLVVSRPFLDLAHPRHLHSTHSELLEDYYQSGRMLLRMSQALGRIVLAGREMTRLAGFTARITELMQVLKDL-NHGRYERTMVSQQEKGIEGAQASPLVPGAGEIINTDNIIKFDHVPLATPNGD-ILIQDLSFEVRSGANVLICGPNGCGKSSLFRVLGELW-PLFGGRLTKPERGKLFYVPQRPYMTLGTLRDQVIYPDGKEDQKKRGISDQVLKEYLDNVQLGHILEREGG---WDSVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEDYIYSHCRKVGITLFTVSHRKSLWKHHEYYLHMD-GRGNYEFKKITED 653
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|130359|sp|P16970.3|ABCD3_RAT (RecName: Full=ATP-binding cassette sub-family D member 3; AltName: Full=70 kDa peroxisomal membrane protein; Short=PMP70) HSP 1 Score: 214.542 bits (545), Expect = 5.331e-60 Identity = 142/515 (27.57%), Postives = 247/515 (47.96%), Query Frame = 0 Query: 95 YVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFS-YFGSIASFLVIAIPIFSGLYDGY---SPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGP----PGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLEDIPQD 601 Y L + +R LT L+ Y +Y++ LD + NPDQ +T DV + ++ ++L I Y + G GP+ M + LVS L L P+ ++T+ +++ EG++RF + + T++E +AF+ + E +L + + ++ + Y ++ +LV++ P + + + EL + ++ + + + ++V ++RLAG T RI EL++ L + + + + + P G+ + N+I V + P + +LIQDL+ + ++LI G + GKSSL RV+ LW P G +F++PQ P+ T GTLR+Q++YP + + ++ L V LG ++ R GG D W D LS GE QR+A RLF+H+P+ A LDE TSA+S+D+ED +Y C I L +V HR+SL ++H L + G++ + I +D Sbjct: 145 YGLNELKLCFRVRLTRYLYEEYLQAFTYYKMGNLDNRIANPDQLLTQDVEKFCNSVVDLYSNLSKPFLDIVLYIFKLTSAIGAQGPASMMAYLLVSGLFLTRLRRPIGKMTIMEQKYEGEYRFVNSRLITNSEEIAFYNGNKREKQTIHSVFRKLVEHLHNFIFFRFSMGFIDSIIAKYIATVVGYLVVSRPFLDLAHPRHLHSTHSELLEDYYQSGRMLLRMSQALGRIVLAGREMTRLAGFTARITELMQVLKDLNHGKYERTMVSQQDKGIEGAQASPLIPGAGEIINADNIIKFDHVPLATPNGD-ILIQDLSFEVRSGANVLICGPNGCGKSSLFRVLGELW-PLFGGHLTKPERGKLFYVPQRPYMTLGTLRDQVIYPDGKEDQKKKGISDQVLKGYLDNVQLGHILEREGG---WDSVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEDYIYSHCRKVGITLFTVSHRKSLWKHHEYYLHMD-GRGNYEFKKITED 653
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|67476960|sp|P33897.2|ABCD1_HUMAN (RecName: Full=ATP-binding cassette sub-family D member 1; AltName: Full=Adrenoleukodystrophy protein; Short=ALDP) HSP 1 Score: 214.927 bits (546), Expect = 1.616e-59 Identity = 182/637 (28.57%), Postives = 296/637 (46.47%), Query Frame = 0 Query: 4 TAHYGFNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVW---KISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYS----AYIR-AGPAGPSGM--FVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSL--FHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMY--LVFQFTQLVQMAAT------------------VSRLAGVTHRIGELIEALAQMP----------GDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLEDI 598 A G N ++L+R L +LFP + + L +L++YV + GR + + +D F L W + A V R Y+ L + +R L +R+YF++ +YR++ +D L NPDQ +T DV A + + ++L +A +Y+ A R AG A PS + V FL + +L + L E+ RR+G+ R+ H + ++E +AF+ VE + +R + A+Q +L R + L Y S + L++A+PI + GYS + A+ V + A LV + T+ +A V+ LAG T R+ E+ + + D AG RS + E + G I +++ ++ P E+V + LN+ ++ LLI G + GKSSL R++ GLW P G V P +F++PQ P+ + G+LR+Q++YP V + + D+E +L V L ++ R GG + W D LS GE QR+ R+F+H+PK A LDE TSA+S+D+E ++Q I L+S+ HR SL +YH +L +G W E + Sbjct: 62 AAKAGMNRVFLQRLLWLLRLLFPRVLCRETGLLALHSAALVSRTFLSVYVARLDGRLARCIVRKDPRAFGWQLLQ--WLLIALPATFVNSAIR-YLEGQLALSFRSRLVAHAYRLYFSQQTYYRVSNMDGRLRNPDQSLTEDVVAFAASVAHLYSNLTKPLLDVAVTSYTLLRAARSRGAGTAWPSAIAGLVVFLTANVL-RAFSPKFGELVAEEARRKGELRYMHSRVVANSEEIAFYGGHEVE-LALLQRSYQDLASQINLILLERLWYVMLEQFLMKYVWSASGLLMVAVPIITA--TGYSESD-AEAVKKAALEKKEEELVSERTEAFTIARNLLTAAADAIERIMSSYKEVTELAGYTARVHEMFQVFEDVQRCHFKRPRELEDAQAGSGTIGRSGVRVEGPLKIRGQVVDVEQGIICENIPIVTPSGEVV-VASLNIRVEEGMHLLITGPNGCGKSSLFRILGGLW-PTYGGVLYKPPPQRMFYIPQRPYMSVGSLRDQVIYPDSVEDMQRKGYSEQDLEAILDVVHLHHILQREGG---WEAMCDWKDVLSGGEKQRIGMARMFYHRPKYALLDECTSAVSIDVEGKIFQAAKDAGIALLSITHRPSLWKYHTHLLQFD-GEGGWKFEKL 684
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|130358|sp|P28288.1|ABCD3_HUMAN (RecName: Full=ATP-binding cassette sub-family D member 3; AltName: Full=70 kDa peroxisomal membrane protein; Short=PMP70) HSP 1 Score: 210.305 bits (534), Expect = 1.787e-58 Identity = 144/514 (28.02%), Postives = 246/514 (47.86%), Query Frame = 0 Query: 100 LTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFS-YFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSE---NAFVCMYLVFQFTQ----LVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGP----PGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLEDIPQD 601 L + +R LT L+ Y +Y++ LD + NPDQ +T DV + ++ ++L I Y + G GP+ M + +VS L L P+ ++T+ +++ EG++R+ + + T++E +AF+ + E +L + + ++ + Y ++ +LV++ P D P L SE + + ++ + +Q +V ++RLAG T RI EL++ L + + + + ++V P G+ N+I V + P + VLI+DLN + ++LI G + GKSSL RV+ LW P G +F++PQ P+ T GTLR+Q++YP + + ++ L V LG ++ R GG D W D LS GE QR+A RLF+H+P+ A LDE TSA+S+D+E +Y C I L +V HR+SL ++H L + G++ + I +D Sbjct: 150 LKLCFRVRLTKYLYEEYLQAFTYYKMGNLDNRIANPDQLLTQDVEKFCNSVVDLYSNLSKPFLDIVLYIFKLTSAIGAQGPASMMAYLVVSGLFLTRLRRPIGKMTITEQKYEGEYRYVNSRLITNSEEIAFYNGNKREKQTVHSVFRKLVEHLHNFILFRFSMGFIDSIIAKYLATVVGYLVVSRPFL----DLSHPRHLKSTHSELLEDYYQSGRMLLRMSQALGRIVLAGREMTRLAGFTARITELMQVLKDLNHGKYERTMVSQQEKGIEGVQVIPLIPGAGEIIIADNIIKFDHVPLATPNGD-VLIRDLNFEVRSGANVLICGPNGCGKSSLFRVLGELW-PLFGGRLTKPERGKLFYVPQRPYMTLGTLRDQVIYPDGREDQKRKGISDLVLKEYLDNVQLGHILEREGG---WDSVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEGYIYSHCRKVGITLFTVSHRKSLWKHHEYYLHMD-GRGNYEFKQITED 653
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|12643305|sp|Q9UBJ2.1|ABCD2_HUMAN (RecName: Full=ATP-binding cassette sub-family D member 2; AltName: Full=Adrenoleukodystrophy-like 1; AltName: Full=Adrenoleukodystrophy-related protein; Short=hALDR) HSP 1 Score: 205.682 bits (522), Expect = 2.462e-56 Identity = 175/630 (27.78%), Postives = 287/630 (45.56%), Query Frame = 0 Query: 8 GFNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVW---KISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLI--VVPFTIAYYTY--SAYIR-AGPAGPS---GMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTF--SYFGSIASFLVIAIPIFSGLYDGYSPGELAQ---VVSE--NAFVCMYLVFQ-----FTQLVQMAATVSRLAGVTHRIGELIEALAQMP----------------GDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLEDI 598 G N + ++ L ILFP + L +L++YV + G+ K + E+ F + W I A V R Y+ L + +R L + YF +Y++ +D L NPDQ +T D+ Q+ + ++L ++ + YT +A R A P GP+ G+ V+ L K +L E+ R+G R+ H I + E +AF++ +VE +K ++ + A Q +L + + + F Y S + +++AIPI + G++ GE Q +VSE AF + +++ V+ LAG T R+ + ++ GA +P LSD + + G + I ++V ++ P E+V + LN ++ LLI G + GKSSL R+++GLW P V P +F++PQ P+ + G+LR+Q++YP V + D+ER+L V L ++ R GG D W D LS GE QR+ R+F+H+PK A LDE TSA+S+D+E ++Q I L+S+ HR SL +YH +L +G W E + Sbjct: 79 GVNADFFKQLLELRKILFPKLVTTETGWLCLHSVALISRTFLSIYVAGLDGKIVKSIVEKKPRTFIIKLIK--WLMIAIPATFVNSAIR-YLECKLALAFRTRLVDHAYETYFTNQTYYKVINMDGRLANPDQSLTEDIMMFSQSVAHLYSNLTKPILDVMLTSYTLIQTATSRGASPIGPTLLAGLVVYATAKVL--KACSPKFGKLVAEEAHRKGYLRYVHSRIIANVEEIAFYRGHKVE-MKQLQKSYKALADQMNLILSKRLWYIMIEQFLMKYVWSSSGLIMVAIPIITA--TGFADGEDGQKQVMVSERTEAFTTARNLLASGADAIERIMSSYKEVTELAGYTARVYNMFWVFDEVKRGIYKRTAVIQESESHSKNGAKVELP----LSDTLAI--KGKVIDVDHGIICENVPIITPAGEVVASR-LNFKVEEGMHLLITGPNGCGKSSLFRILSGLW-PVYEGVLYKPPPQHMFYIPQRPYMSLGSLRDQVIYPDSVDDMHDKGYTDQDLERILHNVHLYHIVQREGG---WDAVMDWKDVLSGGEKQRMGMARMFYHKPKYALLDECTSAVSIDVEGKIFQAAKGAGISLLSITHRPSLWKYHTHLLQFD-GEGGWRFEQL 688
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|75324320|sp|Q6NLC1.1|AB2D_ARATH (RecName: Full=ABC transporter D family member 2, chloroplastic; Short=ABC transporter ABCD.2; Short=AtABCD2; Flags: Precursor) HSP 1 Score: 204.527 bits (519), Expect = 4.282e-56 Identity = 170/595 (28.57%), Postives = 264/595 (44.37%), Query Frame = 0 Query: 58 GR-YYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVS---TLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQM----PGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNV--IHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPL------------------DVFFLPQSPFFTDGTLREQIVYPL-QVIVAEVRP--------------------QETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDG-----HWTLEDI 598 GR +Y L +D F + + + R Y L++ WR +T + Y FY++ + +DNPDQR+ D+++ T + L +V TI ++S + P V L S T ++ L +V L QE++E DFR+ V +R +AES+AF+ + E +R L L+ T + Y I V+A FSG + V++++ +++ F+ +V +S + V R+GE + L P D + +S ++ + + G KS PN + I+ +++ P + L+ +L+ + LLIMG S +GK+SLLR +AGLW G ++ + P DV FLPQ P+ G+LR+Q++YP V E P T D+ R L +V LG + R GG LD W LS GE QRLAF RL QPKLA LDE+TSAL E LYQ+ + I +S+GHR +L ++H +IL I +D +W +ED+ Sbjct: 109 GRDFYNSLANKDQEQFTKQLFYYLCAFAGGIPFFVLRDYTKETLSLRWRSWMTKYYLQRYLKDQTFYKIQS-QSIIDNPDQRLVDDLSSFTGT--ALSFSLTLVNATIDLISFSNILFT--IYPPLFLVLLLYSFGGTAISVFLGKGLVNLNFLQEKKEADFRYSLVRVRENAESIAFYGGEQNEMQLLLQRFRSAFDNLTELLIASRNLEFFTDGYRYLIQILPVAVVAPMYFSGKIE-------FGVINQSVSAFNHILGDFSLVVYQFQAISSFSAVIDRLGEFDDLLDNNIFRDPSDTVDEIELTYQSEMNSSL-LDTNGSIKSQPNQKRLEIEELTLQTPTNGTTLVHNLSADVYDKDHLLIMGPSGSGKTSLLRAMAGLWRSGKGKITFYLDPEVDFTQEKSDTQENSGKRGDVLFLPQRPYMVLGSLRQQLLYPTWSATVEETTPGGSNIDGSPPLLIREDGNEKPTTDDLMRTLEKVCLGHIADRFGG---LDSIHEWSSVLSLGEQQRLAFARLLLSQPKLALLDESTSALDEANEAFLYQQIQSAGITYISIGHRRTLTKFHNKILQISTADPKSNERNWRIEDV 687
BLAST of abc subfamily abcd vs. nr
Match: gi|586962540|gb|AHK05658.1| (ATP-binding cassette transporter sub-family D member 4 isoform X2 [Tigriopus japonicus]) HSP 1 Score: 875.544 bits (2261), Expect = 0.000e+0 Identity = 427/608 (70.23%), Postives = 502/608 (82.57%), Query Frame = 0 Query: 1 MSDTAHYGFNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLD-TGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGD-GGAGKAIPNRSALSDEMR---VGPPGDQKSTPNVIH---IQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLEDIPQ 600 M+D HYGFN LYLRRFYRLH +LFPGW + +A+ LLV L+ LEQWLALYVGL+SG YYKVLG++DW+GF+T TLDA KI AMV+TK RVYVT ++TVGWRRSLTMALH+MYFARI++YRLNVLD +GLDNPDQR+TADV+ L Q+YG IIADLIVVPFTI+YYTYSAY RAGPAGP+GMF+FFL ST++NK+LMSPVVRLTVEQERREGDFRF+HV++RTHAESLAFH+SARVES+K+DE+LL LC TQQSLF+RQLALDLAT FSY GSIASFLVIAIPIFSG+YD SP +LAQ VSENAFVCMYLVFQFT+LVQMA+TVSRLAGVTHRI E+ E L M G+ N S D+ + V P +P H +++V ++ PKS LI++LNL LDL ++LLI+G+SSAGKSSLLRVIAGLW G + + S LDVFFLPQ PFFTDGTLREQIVYPLQV+ +++ PQE+ D+ +L EVGLGDL RCGGSLD DPKWSW DKLSPGEMQRLAFIRLF+H PK+AFLDE+TSALS+DLEDLLY+KCL +NI LVSVGHRE+L++YH Q+L IGLSDG WTL I + Sbjct: 1 MADN-HYGFNTLYLRRFYRLHGLLFPGWRSLNAALMVLLVILSGLEQWLALYVGLISGGYYKVLGDQDWSGFKTTTLDATLKIMAMVITKSVRVYVTNVMTVGWRRSLTMALHQMYFARIRYYRLNVLDESGLDNPDQRITADVSLLCQSYGSIIADLIVVPFTISYYTYSAYTRAGPAGPTGMFLFFLASTIINKLLMSPVVRLTVEQERREGDFRFKHVTVRTHAESLAFHKSARVESIKSDEKLLSLCQTQQSLFNRQLALDLATNVFSYMGSIASFLVIAIPIFSGVYDNLSPSQLAQAVSENAFVCMYLVFQFTKLVQMASTVSRLAGVTHRIAEMTEVLINMNRSFHCQGRKSSNNSEDEDQDKLVAVVPDPKPSESPLKNHSLILENVDLITPKSRKKLIRNLNLALDLGSNLLIVGQSSAGKSSLLRVIAGLWPLDRGVIQRNLSDLDVFFLPQQPFFTDGTLREQIVYPLQVLTSQIDPQESVDLLNILEEVGLGDLPKRCGGSLDTDPKWSWYDKLSPGEMQRLAFIRLFYHCPKMAFLDESTSALSLDLEDLLYKKCLEKNIALVSVGHRETLRQYHDQLLTIGLSDGQWTLTPISR 607
BLAST of abc subfamily abcd vs. nr
Match: gi|586962538|gb|AHK05657.1| (ATP-binding cassette transporter sub-family D member 4 isoform X1 [Tigriopus japonicus]) HSP 1 Score: 552.362 bits (1422), Expect = 0.000e+0 Identity = 279/609 (45.81%), Postives = 392/609 (64.37%), Query Frame = 0 Query: 2 SDTAHYGFNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTG-LDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGH-----------WTLEDI 598 S +YGFN +L R +LH LFP WT+ P +F ++ + LE+++ YVGL+S YY+VLG++D+ F TL ++ I + K R++ M+ V WR ++T L++ YF FY +N+L G L N DQR+TADV++ TYG IIAD++V P TI YYTY AY RAG GP GMF+FF++ST++NK+LMSPVV + EQ+++EG+FRFQHVS R H+ESLAF + V K L RLC +Q+ +F+ Q L+LAT F Y SIASFLVIA+P+FSG YD + EL+ ++SENAFVC+ L++QF++LV ++ VS + G HRI ELIE + D A NR D + + P D K + +V V +P + LI+DL+L ++L +LL+MG SS GKSSLLRVI GLW G++ + L +LPQ P+ G+L+E +++P+ + + ++ I+ L+TE GL ++ RCGG+LD DP+W+W D +SPGE+QRLAFIRLF+H+P LAFLDE+TSALS+ +E+ LY+KC I VSVGHRE+LK+YH +IL I H WTL D+ Sbjct: 7 SVVKYYGFNWQFLVRVTKLHKFLFPSWTSIPVFLFVFILLVRCLEEYVGYYVGLISSDYYQVLGDKDFDAFVQVTLKSLGMIVLIAFIKTTRIWFQEMIVVSWRLAMTTTLNQKYFQHHSFYHINILGRGFLGNADQRITADVSSFCSTYGFIIADILVSPLTIGYYTYDAYTRAGWIGPLGMFLFFVISTVINKLLMSPVVNASAEQDKQEGEFRFQHVSTRIHSESLAFQDGSEVNLEKIQGSLRRLCRSQRRVFNLQFFLNLATNLFQYVSSIASFLVIAVPLFSGAYDDLTGSELSSLISENAFVCINLIYQFSKLVNISPYVSEMGGAAHRIAELIETFQSLEMD----HANKNR----DGIGMSPYLDPKVA---FRLTNVDVRSPGMDRPLIKDLSLDIELGQNLLVMGPSSCGKSSLLRVIKGLWPISNGAIEVN-PDLKAIYLPQRPYMMSGSLKELVLHPIDTLQCSLTIEDEQRIKDLVTEFGLDHILERCGGNLDYDPQWNWSDVMSPGELQRLAFIRLFYHKPALAFLDESTSALSLSVEEKLYEKCSKMGITCVSVGHRETLKKYHTKILEIKEESDHNASTHVNTNALWTLRDL 603
BLAST of abc subfamily abcd vs. nr
Match: gi|1022773295|gb|KZS17405.1| (ABC protein, subfamily ABCD [Daphnia magna]) HSP 1 Score: 529.25 bits (1362), Expect = 5.530e-179 Identity = 282/604 (46.69%), Postives = 393/604 (65.07%), Query Frame = 0 Query: 3 DTAHYGFNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQM--------PGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFS--PLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLE 596 D +GFN + RRF+RL +LFPG + P +F LL+ +A L++++ VGL+ +Y+VLGE+D GF TL +V I A+ V K + Y++++L + WR+ LT A+HR+YF I +Y+LNVLD +DNPDQR+TAD+ L + + ++V PFTIAYY+Y AY+ G GP+ F+FF+V T +NK+LMSP+V V ERREGDFR++H+ IR++AESLAF AR+E K + +L L TQ SL+ RQ L+LA F Y GSI S+L +A+PIFSG YDG S EL+ ++S+NAFVC+YL+ F+ LV ++++V++LAGVTHR+ ELIE L Q+ PGD S VG D K + ++ V+ AP L+++L L L SLLI G SSAGK+SLLR++ GLW G+++ H + P V FLPQ P+ TDGTLREQI +PL V + + ET ++ L ++ L L+ R GG LD +W+W D LSPGEMQRL+FIRL +H+P +AFLDEATSAL M++E LLY + + I L+SVGHRESL+ +H+ +L + DG WTLE Sbjct: 9 DGKDHGFNVNFFRRFWRLQHLLFPGVFSLPLGLFSLLLLVALLDEFIIYGVGLIPSGFYQVLGEKDLPGFINQTLRSVGIILAVAVNKAIKTYISQVLNLTWRQLLTRAVHRLYFTDINYYQLNVLDKFVDNPDQRITADINILCLVFSSVAIKVVVSPFTIAYYSYKAYVGTGWVGPTSCFLFFIVGTFVNKLLMSPIVAWVVRNERREGDFRYKHMQIRSNAESLAFLTGARLEESKTNNKLDLLLTTQHSLYGRQFFLNLAVNMFDYLGSIISYLALAVPIFSGRYDGLSSAELSALISQNAFVCIYLISTFSTLVDLSSSVTQLAGVTHRVSELIERLQQLYDRSDAETPGDLKVVSVCKKNS-------VGTMDDMKQEGYL--MEGVAFKAPGRSEDLVKELYLHLRPGESLLITGSSSAGKTSLLRLLRGLWKLNRGTLTAHCTPGPCGVLFLPQKPYLTDGTLREQITFPLSVDLDLIPNDETEELLSYLHKMKLDGLMTRIGG-LDRPAEWNWYDVLSPGEMQRLSFIRLLYHKPAMAFLDEATSALDMEMEQLLYSAAVDKGITLISVGHRESLRAFHKNLLHLK-GDGSWTLE 601
BLAST of abc subfamily abcd vs. nr
Match: gi|321453858|gb|EFX65057.1| (ABC protein, subfamily ABCD [Daphnia pulex]) HSP 1 Score: 516.538 bits (1329), Expect = 3.295e-174 Identity = 277/600 (46.17%), Postives = 395/600 (65.83%), Query Frame = 0 Query: 3 DTAHYGFNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVSNHFS--PLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTLEDIPQ 600 D +GFN + RRF+RL +LFPG + P +F LL+ +A L++++ VGL+ +Y+VLGE+D+ GF TL +V I A+ V K + Y++++L + WR+ LT A+HR+YF I +Y+LNVLD +DNPDQR+TAD+ L + + ++V PFTI+YY+Y AY+ G GP+ F+FF+V T++NK+LMSP+V V+ ERREGDFR++H+ IR++AESLAF AR+E K + +L L TQ SL+ RQ L+LA F Y GSI S+L +A+PIFSG YD SP EL+ ++S+NAFVC+YL+ F+ LV ++++V++LAGVTHR+ ELIE + N + + DE+ G ++ V+ AP L++DL L L SLLI G SSAGK+SLLR++ GLW G+++ H++ P V FLPQ P+ TDGTLREQI +PL V + + ET ++ L ++ L L++R GG LD +W+W D LSPGEMQRL+FIRL +H+P +AFLDEATSAL M++E LLY + + I LVSVGHR SL+ +H+++L + DG WTLE I Sbjct: 9 DARDHGFNVSFFRRFWRLQHLLFPGIFSLPLGLFALLLLVALLDEFIIYGVGLIPSGFYQVLGEKDFPGFINQTLKSVGIILAVAVNKAVKTYISQILNLTWRQLLTRAVHRLYFTGINYYQLNVLDKFVDNPDQRITADINILCLVFSSVAIKVVVSPFTISYYSYKAYVGTGWVGPTSCFLFFIVGTVVNKLLMSPIVAWVVKNERREGDFRYKHMQIRSNAESLAFLTGARLEESKTNNKLDVLLKTQHSLYGRQFFLNLAVNMFDYLGSIISYLALAVPIFSGRYDDISPAELSSLISQNAFVCIYLISTFSTLVDLSSSVTQLAGVTHRVSELIEL---------SISTTKNTTGMFDEVNTEDDG--------YFMEGVAFKAPGRTDELVKDLCLHLKPGESLLITGSSSAGKTSLLRLLRGLWRLSRGNLTAHYTPGPCGVLFLPQKPYLTDGTLREQITFPLSVDLELITNDETEELLNYLQKMKLDGLMSRIGG-LDRPVEWNWYDVLSPGEMQRLSFIRLLYHRPAMAFLDEATSALDMEMEQLLYSAAVDKGITLVSVGHRASLRAFHKKVLHLK-GDGSWTLESISN 589
BLAST of abc subfamily abcd vs. nr
Match: gi|677547160|gb|KFR08121.1| (ATP-binding cassette sub-family D member 4, partial [Nipponia nippon]) HSP 1 Score: 497.278 bits (1279), Expect = 8.023e-167 Identity = 262/587 (44.63%), Postives = 371/587 (63.20%), Query Frame = 0 Query: 11 GLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVS--NHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTL 595 GL+LRRF RL A+LFPGW + + +F L+ +A LEQ + VG++ +YY+VLG +D++GF+T T A+ I K ++ M+ V WR+SLT LH YF +Y L+VL +DNPDQR++ DV + + + LI+ PFT+AYYTY + G GP G+F +F++ T++NKVLMSP+V V+QE+ EGDFRF+H+ IR +AE AF+++ RVE ++ + RL L TQ+ L ++L L + TF Y GSI S++VIAIPIFSG+Y SP EL+ +VS+NAFV +YL+ F+QL+ +++T++ +AG THRIGEL E L + + S D G + T + ++ V++ P S +LI+DL+L + S++I+G + GK+SLLRV+ GLW GS+ F P V FLPQ PFFTDG+LREQ++YPL+ I + I R L GL DL+AR GG LD W+W D LSPGEMQRL+F RLF+ QPK A LDEATSAL+ ++E LY+ CL + L+SVGHR SL+++H IL + +G W L Sbjct: 4 GLFLRRFLRLQAVLFPGWPSPGALMFLTLLCVALLEQLVIYQVGVIPSQYYEVLGNKDFSGFQTLTAVALTLIVVNSTLKSFDQFICNMMYVSWRKSLTEYLHSCYFQGQVYYSLHVLREDIDNPDQRISQDVERFCRQLSSMASKLIISPFTLAYYTYQCFHSTGWLGPVGIFGYFIIGTIVNKVLMSPIVSKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGRVEHMRTNRRLQSLLQTQRELIGKELWLYIGINTFDYLGSILSYVVIAIPIFSGVYSDLSPTELSALVSKNAFVSIYLISCFSQLIDLSSTMTDIAGYTHRIGELQETLLSLGRKKNGNYSEAKASWDLDGSHTGEDSVPRDTAFL--MERVTLSVPSSGKLLIKDLSLRISQGNSVMIVGNTGTGKTSLLRVLGGLWESTQGSIKMLTCFGPRGVVFLPQRPFFTDGSLREQVIYPLKDIYPVSGSADDERIVRFLEVAGLTDLLARAGG-LDEQVDWNWYDILSPGEMQRLSFARLFYLQPKYAVLDEATSALTEEVEQELYRVCLQLGMTLISVGHRASLEKFHSWILKLH-GEGRWEL 586
BLAST of abc subfamily abcd vs. nr
Match: gi|768348572|ref|XP_011571114.1| (PREDICTED: ATP-binding cassette sub-family D member 4 isoform X1 [Aquila chrysaetos canadensis]) HSP 1 Score: 497.664 bits (1280), Expect = 1.766e-166 Identity = 265/589 (44.99%), Postives = 372/589 (63.16%), Query Frame = 0 Query: 9 FNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVS--NHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTL 595 +GL+LRRF RL A+LFPGW + + +F L+ +A LEQ + VG++ RYY+VLG +D++GF+T T A+ I A K ++ M+ V WR+SLT LH YF +Y L+VL +DNPDQR++ DV + + + LI+ PFT+AYYTY + G GP +F +F++ T++NKVLMSP+V V+QE+ EGDFRF+H+ IR +AE AF+++ RVE ++ D RL L TQ+ L ++L L + TF Y GSI S+++IAIPIFSG+Y SP EL+ +VS+NAFV +YL+ F+QL+ +++TV+ +AG THRIGEL E L + + S D G + T ++ ++SV P S +LI+DL+L + S++I+G + GK+SLLRV+ GLW GS+ F P V FLPQ PFFTDG+LREQ++YPL+ I + I R L GL DL+AR GG LD W+W D LSPGEMQRL+F RLF+ QPK A LDEATSAL+ ++E LY+ CL + L+SVGHR SL+++H IL + +G W L Sbjct: 21 LDGLFLRRFLRLQAVLFPGWPSPSALMFLTLLCVALLEQLVIYQVGVIPSRYYEVLGNKDFSGFKTLTAVALTLIVANSTLKSFDQFICNMMYVSWRKSLTEYLHSCYFQGQVYYSLHVLREDIDNPDQRISQDVERFCRQLSSMASKLIISPFTLAYYTYQCFHSTGWLGPVSIFGYFIIGTIVNKVLMSPIVSKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGRVEHMRTDRRLQSLLQTQRELIGKELWLYIGINTFDYLGSILSYVIIAIPIFSGVYGDLSPTELSALVSKNAFVSIYLISCFSQLIDLSSTVTDVAGYTHRIGELQETLLSLGRKKNNSYSEAKASWDLDCSHSGEDPVPRDTAFLLERMTLSV--PSSGKLLIKDLSLRISQGNSVMIVGNTGTGKTSLLRVLGGLWESTQGSIKMLTCFGPRGVVFLPQRPFFTDGSLREQVIYPLKEIYPVSGSADDERIVRFLELAGLTDLLARAGG-LDEHVDWNWYDILSPGEMQRLSFARLFYLQPKYAVLDEATSALTEEVEHELYRVCLQLGMTLISVGHRASLEKFHSWILKLH-GEGRWEL 605
BLAST of abc subfamily abcd vs. nr
Match: gi|1315505048|gb|PKU40184.1| (hypothetical protein llap_9520 [Limosa lapponica baueri]) HSP 1 Score: 495.738 bits (1275), Expect = 9.679e-166 Identity = 265/589 (44.99%), Postives = 370/589 (62.82%), Query Frame = 0 Query: 9 FNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVS--NHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTL 595 +GL+LRRF RL A+LFPGW + +F L+ +A LEQ + VG++ +YY+VLG +D+AGF+T T A+ I K ++ M+ V WR+SLT LH YF +Y L+VL +DNPDQR++ DV + + + +I+ PFT+AYYTY + G GP +F +F++ T++NKVLMSP+V V+QE+ EGDFRF+H+ IR +AE AF+++ RVE ++ D RL RL TQ+ L ++L L + TF Y GSI S++VIAIPIFSG+Y SP EL+ +VS+NAFV +YL+ F+QL+ +++TV+ +AG THRIGEL E L + + S D R K T + ++ V++ P S +LI+DL+L + S++IMG + GK+SLLRV+ GLW GS F P V FLPQ PFFTDG+LREQ++YPL+ I + I R L GL DL+AR GG LD W+W D LSPGEMQRL+F RLF+ QPK A LDEATSAL+ ++E +Y+ CL + L+SVGHR SL+++H IL + +G W L Sbjct: 7 LDGLFLRRFLRLQAVLFPGWPSPGVLMFLTLLCVALLEQLVIYQVGVIPSQYYEVLGNKDFAGFKTLTAVALTLIVVNSTLKSFDQFICNMMYVSWRKSLTEYLHTCYFQGQVYYSLHVLREDIDNPDQRISQDVERFCRQLSSMASKIIISPFTLAYYTYQCFHSTGWLGPVSIFGYFIIGTIVNKVLMSPIVSKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGRVEHMRTDRRLQRLLQTQRELIGKELWLYIGINTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSALVSKNAFVSIYLIGCFSQLIDLSSTVTDVAGYTHRIGELQETLLSLGRKKNDNYSEAKASWDLDGSRSREDPVPKDTAFL--LERVTLSVPSSGKLLIKDLSLRISQGNSVMIMGNTGTGKTSLLRVLGGLWESTRGSTKMLTCFGPRGVVFLPQKPFFTDGSLREQVIYPLKEIYPVSGSADDERIVRFLELAGLTDLLARAGG-LDEQVDWNWYDILSPGEMQRLSFARLFYLQPKYAVLDEATSALTEEVEHEMYRVCLQLGMTLISVGHRASLEKFHSWILKLH-GEGRWEL 591
BLAST of abc subfamily abcd vs. nr
Match: gi|677198329|gb|KFP46920.1| (ATP-binding cassette sub-family D member 4, partial [Cathartes aura]) HSP 1 Score: 494.197 bits (1271), Expect = 1.107e-165 Identity = 264/587 (44.97%), Postives = 373/587 (63.54%), Query Frame = 0 Query: 13 YLRRFYRLHAILFPGWTAYPSAVFYL-LVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPG-DQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVS--NHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTL 595 +LRRF RL A+LFPGW + PSA+ +L L+ +A LEQ + VG++ +YY+VLG +D++GF+T T A+ I K ++ M+ V WR+SLT LH YF +Y L+VL +DNPDQR++ DV + + + LI+ PFT+AYYTY + G GP +F +F++ T++NKVLMSP+V V+QE+ EGDFRF+H+ IR +AE AF+++ RVE ++ D RL L TQ+ L ++L L + TF Y GSI S++VIA+PIFSG+Y SP EL+ +VS+NAFV +YL+ F+QL+ +++TV+ +AG THRIGEL E L + G K + + S ++ G D ++ V++ P S +LI+DL+L + S++I+G + GK+SLLRV+ GLW GS+ F P V FLPQ PFFTDG+LREQ++YPL+ I + I R L GL DL+AR GG LD W+W D LSPGEMQRL+F RLF+ QPK A LDEATSAL+ ++E LY+ CL + L+SVGHR SL+++H IL + +G W L Sbjct: 1 FLRRFLRLQAVLFPGWPS-PSALMFLTLLCVALLEQLVIYQVGVIPSQYYEVLGNKDFSGFKTLTATALTLIVVNSTLKSFNQFICNMMYVSWRKSLTEYLHSCYFQGQVYYSLHVLREDIDNPDQRISQDVERFCRQLSSMASKLIISPFTLAYYTYQCFHSTGWLGPVSIFGYFIIGTIVNKVLMSPIVSKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGRVEHMRTDRRLQSLLQTQRELIGKELWLYIGINTFGYMGSILSYVVIAVPIFSGVYSDLSPTELSALVSKNAFVSIYLIGCFSQLIDLSSTVTDVAGYTHRIGELQETLLSL----GRKKKTYSEAKASWDLDSSHSGEDPVPLDTAFLLERVTLSVPSSGKLLIKDLSLRISQGNSVMIVGNTGTGKTSLLRVLGGLWESTQGSIKMLTCFGPRGVVFLPQRPFFTDGSLREQVIYPLKEIYPVSGSADDERIVRFLELAGLTDLLARAGG-LDEQVDWNWYDILSPGEMQRLSFARLFYLQPKYAVLDEATSALTEEVEHELYRVCLQLGMTLISVGHRASLEKFHSWILKLH-GEGRWEL 580
BLAST of abc subfamily abcd vs. nr
Match: gi|224051485|ref|XP_002199934.1| (PREDICTED: ATP-binding cassette sub-family D member 4 [Taeniopygia guttata]) HSP 1 Score: 496.508 bits (1277), Expect = 1.381e-165 Identity = 260/589 (44.14%), Postives = 372/589 (63.16%), Query Frame = 0 Query: 9 FNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPNVIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVS--NHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTL 595 +GL+LRRF R+ A+LFPGW + + +F L+G+A LEQ + VG++ +YY+VLG++D++GF+T T +V I K ++ M+ V WR+SLT LH YF +Y L VL +DNPDQR++ DV + +++ L++ PFT+AYYTY + G GP +F +F++ T++NKVLMSP+V V+QE+ EGDFRF+H+ IR +AE AF+++ RVE ++ + RL L TQ+ L ++L L + TF Y GSI S++VIAIPIFSG+Y SP EL+ +VS+NAFV +YL+ F+QL+ +++TV+ +AG THRIGEL E L + + S D G D + ++ V++ P S+ +LI+DL+L + S++I+G + GK+S LRV+ GLW GS+ F P V FLPQ PFFTDG+LREQ++YPL+ I + I R L GL DL+AR GG LD W+W D LSPGEMQRL+F RLF+ QPK A LDEATSAL+ ++E LY+ CL + L+SVGHR SL+++H IL + +G W L Sbjct: 61 LDGLFLRRFLRILAVLFPGWPSPSALMFLTLLGVALLEQLVIYQVGVIPSQYYEVLGKKDFSGFKTLTAVSVTLIIVNSTLKSFDQFICNMMYVNWRKSLTEYLHSCYFQGQVYYNLLVLREDIDNPDQRISQDVERFCRQLSSMVSKLVISPFTLAYYTYQCFHSTGWLGPVSIFGYFVIGTMINKVLMSPIVSKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGRVEHMRTNRRLQSLLKTQRELIGKELWLSIGINTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSSLVSKNAFVSIYLIGCFSQLIDLSSTVTDVAGYTHRIGELQETLLSLGRKKNGNYSEAKTSWDLDGSHSGE--DPVPSDTAFLLERVTLSVPSSDKLLIKDLSLRISQGNSVMIVGNTGTGKTSFLRVLGGLWESTRGSIRMLTCFGPRGVVFLPQRPFFTDGSLREQVIYPLKEIYPLSGSADDERIVRFLELAGLTDLLARTGG-LDEQVDWNWYDILSPGEMQRLSFARLFYLQPKYAVLDEATSALTEEVEHELYRMCLQLGMTLISVGHRPSLEKFHSWILKLH-GEGRWEL 645
BLAST of abc subfamily abcd vs. nr
Match: gi|960965372|ref|XP_014797466.1| (PREDICTED: ATP-binding cassette sub-family D member 4 isoform X2 [Calidris pugnax]) HSP 1 Score: 494.967 bits (1273), Expect = 2.752e-165 Identity = 262/591 (44.33%), Postives = 369/591 (62.44%), Query Frame = 0 Query: 9 FNGLYLRRFYRLHAILFPGWTAYPSAVFYLLVGLAALEQWLALYVGLVSGRYYKVLGERDWAGFETATLDAVWKISAMVVTKCCRVYVTRMLTVGWRRSLTMALHRMYFARIKFYRLNVLDTGLDNPDQRMTADVAALVQTYGEIIADLIVVPFTIAYYTYSAYIRAGPAGPSGMFVFFLVSTLLNKVLMSPVVRLTVEQERREGDFRFQHVSIRTHAESLAFHQSARVESVKADERLLRLCATQQSLFHRQLALDLATQTFSYFGSIASFLVIAIPIFSGLYDGYSPGELAQVVSENAFVCMYLVFQFTQLVQMAATVSRLAGVTHRIGELIEALAQMPGDGGAGKAIPNRSALSDEMRVGPPGDQKSTPN--VIHIQSVSVMAPKSELVLIQDLNLTLDLNTSLLIMGRSSAGKSSLLRVIAGLWSPQTGSVS--NHFSPLDVFFLPQSPFFTDGTLREQIVYPLQVIVAEVRPQETADIERLLTEVGLGDLIARCGGSLDLDPKWSWPDKLSPGEMQRLAFIRLFFHQPKLAFLDEATSALSMDLEDLLYQKCLARNIRLVSVGHRESLKRYHRQILAIGLSDGHWTL 595 +GL+LRRF RL A+LFPGW + +F L+ +A LEQ + VG++ +YY+VLG +D+AGF+T T A+ I K ++ M+ V WR+SLT LH YF +Y L+VL +DNPDQR++ DV + + + +++ PFT+AYYTY + G GP +F +F++ T++NKVLMSP+V V+QE+ EGDFRF+H+ IR +AE AF+++ RVE ++ D RL RL TQ+ L ++L L + TF Y GSI S++VIAIPIFSG+Y SP EL+ +VS+NAFV +YL+ F+QL+ +++TV+ +AG THRIGEL E L + K N S + + P ++ V++ P S +LI+DLNL + S++I+G + GK+SLLRV+ GLW GS+ F P V FLPQ PFFTDG+LREQ++YPL+ I + I R L GL DL+ R GG LD W+W D LSPGEMQRL+F RLF+ QPK A LDEATSAL+ ++E +Y+ CL + L+SVGHR SL+++H IL + +G W L Sbjct: 21 LDGLFLRRFLRLQAVLFPGWPSSGVLMFLTLLCVALLEQLVIYQVGVIPSQYYEVLGNKDFAGFKTLTAVALTLIVVNSTLKSFDQFICNMMYVSWRKSLTEYLHGCYFQGQVYYSLHVLREDIDNPDQRISQDVERFCRQLSSMASKIVISPFTLAYYTYQCFHSTGWLGPVSIFGYFIIGTIVNKVLMSPIVSKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGRVEHMRTDRRLQRLLQTQRELIGKELWLYIGINTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSALVSKNAFVSIYLIGCFSQLIDLSSTVTDVAGYTHRIGELQETLLSL-----GRKKNDNYSEAKASWDLDGHSREDPVPKDTAFLLERVTLSVPSSGKLLIKDLNLRISQGNSVMIVGNTGTGKTSLLRVLGGLWESTRGSIKMLTCFGPRGVVFLPQRPFFTDGSLREQVIYPLKEIYPVSGSVDDERIVRFLELAGLTDLLERAGG-LDEQVDWNWYDILSPGEMQRLSFARLFYLQPKYAVLDEATSALTEEVEHEMYRVCLQLGMTLISVGHRASLEKFHNWILKLH-GEGRWEL 604 The following BLAST results are available for this feature:
BLAST of abc subfamily abcd vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 3
BLAST of abc subfamily abcd vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of abc subfamily abcd vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold96_size378025:54002..58604- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold96_size378025-snap-gene-0.23 ID=maker-scaffold96_size378025-snap-gene-0.23|Name=abc subfamily abcd|organism=Tigriopus kingsejongensis|type=gene|length=4603bp|location=Sequence derived from alignment at scaffold96_size378025:54002..58604- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'abc subfamily abcd' has the following synonyms
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