60s ribosomal protein l27a, snap_masked-scaffold127_size327531-processed-gene-2.17 (gene) Tigriopus kingsejongensis

Overview
Name60s ribosomal protein l27a
Unique Namesnap_masked-scaffold127_size327531-processed-gene-2.17
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of 60s ribosomal protein l27a vs. L. salmonis genes
Match: EMLSAG00000012539 (supercontig:LSalAtl2s:LSalAtl2s923:150712:153740:1 gene:EMLSAG00000012539 transcript:EMLSAT00000012539 description:"maker-LSalAtl2s923-augustus-gene-0.23")

HSP 1 Score: 261.922 bits (668), Expect = 2.760e-87
Identity = 123/141 (87.23%), Postives = 130/141 (92.20%), Query Frame = 0 
Query:    1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKT 141
            MSTNKKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHA+  NQYCP VNLDKLWSLVSEQTR KY K+ KKAPVIDV++AG+FKVLGKG LP QPVIVKAR FSR+AEEKIK  
Sbjct:    1 MSTNKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHAHTINQYCPSVNLDKLWSLVSEQTREKYAKDKKKAPVIDVTKAGYFKVLGKGLLPNQPVIVKARLFSRKAEEKIKSV 141
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BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|75060399|sp|Q56K03.3|RL27A_BOVIN (RecName: Full=60S ribosomal protein L27a)

HSP 1 Score: 220.705 bits (561), Expect = 2.418e-73
Identity = 107/140 (76.43%), Postives = 122/140 (87.14%), Query Frame = 0 
Query:    1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKN-TKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIK 139
            M +  +KTRKLRGHVSHGHGR+GKHRKHPGGRGNAGG HHHRINFDKYHPGYFGKVGMR++H+  NQ   +CP VNLDKLW+LVSEQTR+   KN T  AP+IDV R+G++KVLGKG LPKQPVIVKA+FFSR+AEEKIK
Sbjct:    1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRHYHLKRNQ--SFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIK 138
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BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|306526288|sp|P14115.5|RL27A_MOUSE (RecName: Full=60S ribosomal protein L27a; AltName: Full=L29)

HSP 1 Score: 219.935 bits (559), Expect = 4.514e-73
Identity = 107/140 (76.43%), Postives = 122/140 (87.14%), Query Frame = 0 
Query:    1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKN-TKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIK 139
            M +  +KTRKLRGHVSHGHGR+GKHRKHPGGRGNAGG HHHRINFDKYHPGYFGKVGMR++H+  NQ   +CP VNLDKLW+LVSEQTR+   KN T  AP+IDV R+G++KVLGKG LPKQPVIVKA+FFSR+AEEKIK
Sbjct:    1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRHYHLKRNQ--SFCPTVNLDKLWTLVSEQTRVNAAKNKTGVAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIK 138
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BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|75076570|sp|Q4R723.1|RL27A_MACFA (RecName: Full=60S ribosomal protein L27a)

HSP 1 Score: 219.935 bits (559), Expect = 4.563e-73
Identity = 107/140 (76.43%), Postives = 122/140 (87.14%), Query Frame = 0 
Query:    1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKN-TKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIK 139
            M +  +KTRKLRGHVSHGHGR+GKHRKHPGGRGNAGG HHHRINFDKYHPGYFGKVGMR++H+  NQ   +CP VNLDKLW+LVSEQTR+   KN T  AP+IDV R+G++KVLGKG LPKQPVIVKA+FFSR+AEEKIK
Sbjct:    1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMRHYHLKRNQ--SFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIK 138
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BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|1173017|sp|P46776.2|RL27A_HUMAN (RecName: Full=60S ribosomal protein L27a; AltName: Full=Large ribosomal subunit protein uL15 >gi|60393659|sp|Q5REY2.3|RL27A_PONAB RecName: Full=60S ribosomal protein L27a)

HSP 1 Score: 219.164 bits (557), Expect = 1.157e-72
Identity = 106/140 (75.71%), Postives = 122/140 (87.14%), Query Frame = 0 
Query:    1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKN-TKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIK 139
            M +  +KTRKLRGHVSHGHGR+GKHRKHPGGRGNAGG HHHRINFDKYHPGYFGKVGM+++H+  NQ   +CP VNLDKLW+LVSEQTR+   KN T  AP+IDV R+G++KVLGKG LPKQPVIVKA+FFSR+AEEKIK
Sbjct:    1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKRNQ--SFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIK 138
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BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|59800187|sp|Q5R1X0.3|RL27A_PANTR (RecName: Full=60S ribosomal protein L27a)

HSP 1 Score: 218.394 bits (555), Expect = 2.022e-72
Identity = 106/140 (75.71%), Postives = 122/140 (87.14%), Query Frame = 0 
Query:    1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKN-TKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIK 139
            M +  +KTRKLRGHVSHGHGR+GKHRKHPGGRGNAGG HHHRINFDKYHPGYFGKVGM+++H+  NQ   +CP VNLDKLW+LVSEQTR+   KN T  AP+IDV R+G++KVLGKG LPKQPVIVKA+FFSR+AEEKIK
Sbjct:    1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKRNQ--SFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIK 138
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BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|1350712|sp|P47830.2|RL27A_XENLA (RecName: Full=60S ribosomal protein L27a; AltName: Full=L22)

HSP 1 Score: 218.394 bits (555), Expect = 2.232e-72
Identity = 105/140 (75.00%), Postives = 121/140 (86.43%), Query Frame = 0 
Query:    1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTK-KAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIK 139
            M +  +KTRKLRGHVSHGHGR+GKHRKHPGGRGNAGG HHHRINFDKYHPGYFGKVGMR++H+  NQ   +CP +NLDKLW+LVSEQTRL + KN +  AP+ID   AG++KVLGKG LPKQPVIVKA+FFSR+AEEKIK
Sbjct:    1 MPSKLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRHYHLKKNQ--SFCPTINLDKLWTLVSEQTRLNHAKNLEGPAPIIDAVHAGYYKVLGKGKLPKQPVIVKAKFFSRKAEEKIK 138
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BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|132846|sp|P18445.3|RL27A_RAT (RecName: Full=60S ribosomal protein L27a)

HSP 1 Score: 218.009 bits (554), Expect = 2.659e-72
Identity = 106/140 (75.71%), Postives = 121/140 (86.43%), Query Frame = 0 
Query:    1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKK-APVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIK 139
            M +  +KTRKLRGHVSHGHGR+GKHRKHPGGRGNAGG HHHRINFDKYHPGYFGKVGMR++H+  NQ   +CP VNLDKLW+LVSEQTR+   KN    AP+IDV R+G++KVLGKG LPKQPVIVKA+FFSR+AEEKIK
Sbjct:    1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRHYHLKRNQ--SFCPTVNLDKLWTLVSEQTRVNAAKNKNGVAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIK 138
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BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|3122699|sp|O01358.1|RL27A_OSCTI (RecName: Full=60S ribosomal protein L27a; AltName: Full=Ribosomal protein RPL-27)

HSP 1 Score: 202.601 bits (514), Expect = 3.083e-66
Identity = 99/139 (71.22%), Postives = 118/139 (84.89%), Query Frame = 0 
Query:    1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIK 139
            M+ + +KTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRIN DKYHPGYFGKVGMR FH+  N+ + YCP VN+D+LW+LV E+ + K   + +KAPVID  +AG+FKVLGKG LPKQP+IVKA+FFS +AE KIK
Sbjct:    1 MAHSLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINRDKYHPGYFGKVGMRVFHL--NKNHHYCPTVNVDRLWALVPEEQKTKV--SAEKAPVIDCVKAGYFKVLGKGLLPKQPLIVKAKFFSHEAENKIK 135
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BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|20455458|sp|P41092.2|RL27A_DROME (RecName: Full=60S ribosomal protein L27a)

HSP 1 Score: 196.438 bits (498), Expect = 9.709e-64
Identity = 98/147 (66.67%), Postives = 123/147 (83.67%), Query Frame = 0 
Query:    2 STNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQ--TRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKTE--CL 144
            +  +KKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGG HHHRINFDKYHPGYFGKVGMRNFH+   + +++ P +NLDKLWSLV  +    L+ EK+T KAPVID+ + G++K+LG+G+LP +PVIVKA++FS++AE+KIKK    CL
Sbjct:    3 NIKRKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHL--RRQHKFRPEINLDKLWSLVGAEKFAELEKEKST-KAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKKAGGVCL 146
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BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|2500273|sp|Q27021.1|RL27A_TENMO (RecName: Full=60S ribosomal protein L27a)

HSP 1 Score: 191.43 bits (485), Expect = 8.138e-62
Identity = 93/140 (66.43%), Postives = 115/140 (82.14%), Query Frame = 0 
Query:    1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTK-KAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIK 139
            MST+KKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGG HHHRINFDKYHPGYFGK+GMRN+H+  N  +++ P +NLDKLW+LVSEQTR KY+ + + KAPVID+ +AG++K+LGKG       ++K  F   + E+KIK
Sbjct:    1 MSTHKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKLGMRNYHLRRN--SKWAPAINLDKLWTLVSEQTRSKYQNHPEGKAPVIDIVKAGYYKLLGKGACLTNLSLLKPSFSLNRLEDKIK 138
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BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|225712762|gb|ACO12227.1| (60S ribosomal protein L27a [Lepeophtheirus salmonis] >gi|225713762|gb|ACO12727.1| 60S ribosomal protein L27a [Lepeophtheirus salmonis] >gi|290462325|gb|ADD24210.1| 60S ribosomal protein L27a [Lepeophtheirus salmonis] >gi|290562277|gb|ADD38535.1| 60S ribosomal protein L27a [Lepeophtheirus salmonis])

HSP 1 Score: 257.299 bits (656), Expect = 2.505e-85
Identity = 123/139 (88.49%), Postives = 130/139 (93.53%), Query Frame = 0 
Query:    1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIK 139
            MSTNKKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHA+  NQYCP VNLDKLWSLVSEQTR KY K+ KKAPVIDV++AG+FKVLGKG LP QPVIVKAR FSR+AEEKIK
Sbjct:    1 MSTNKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHAHTINQYCPSVNLDKLWSLVSEQTREKYAKDKKKAPVIDVTKAGYFKVLGKGLLPNQPVIVKARLFSRKAEEKIK 139
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BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|961374964|gb|ALS04226.1| (60S ribosomal protein L27a [Acartia pacifica])

HSP 1 Score: 251.521 bits (641), Expect = 4.988e-83
Identity = 119/139 (85.61%), Postives = 128/139 (92.09%), Query Frame = 0 
Query:    1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIK 139
            MSTNKKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVH N  NQ+CP +NLDKLW+LV E+TR+K  K+TK APVID S AG+FKVLGKG LPKQPVIVKARFFSR+AEEKIK
Sbjct:    1 MSTNKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHPNVSNQFCPAINLDKLWTLVPEETRVKAAKDTKTAPVIDCSGAGYFKVLGKGILPKQPVIVKARFFSRRAEEKIK 139
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BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|1325300846|ref|XP_023332015.1| (60S ribosomal protein L27a-like [Eurytemora affinis])

HSP 1 Score: 250.751 bits (639), Expect = 1.017e-82
Identity = 121/139 (87.05%), Postives = 124/139 (89.21%), Query Frame = 0 
Query:    1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIK 139
            MST KKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVH N  N YCP +NLDKLWSLVSEQTR KY     KAPVID SRAG+FKVLGKG LPKQPVIVKARFFSR AEEKIK
Sbjct:    1 MSTCKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHPNISNNYCPAINLDKLWSLVSEQTRTKYADVKDKAPVIDCSRAGYFKVLGKGVLPKQPVIVKARFFSRVAEEKIK 139
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BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|961376548|gb|ALS05018.1| (60S ribosomal protein L27a [Centropages dorsispinatus])

HSP 1 Score: 249.21 bits (635), Expect = 4.609e-82
Identity = 118/139 (84.89%), Postives = 125/139 (89.93%), Query Frame = 0 
Query:    1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIK 139
            MST KKKTRKLRGHVSHGHGR+GKHRKHPGGRGN+GGQHHHRINFDKYHPGYFGKVGMRNFHVH N  N +CP +NLDKLW+LVSEQTR KY   T KAPVID +RAG FKVLGKG LPKQPVIVKARFFSR+AEEKIK
Sbjct:    1 MSTCKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNSGGQHHHRINFDKYHPGYFGKVGMRNFHVHPNISNNFCPAINLDKLWTLVSEQTRTKYASVTDKAPVIDCNRAGIFKVLGKGALPKQPVIVKARFFSRRAEEKIK 139
[Close]
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|961375786|gb|ALS04637.1| (60S ribosomal protein L27a [Pseudodiaptomus poplesia] >gi|961376096|gb|ALS04792.1| 60S ribosomal protein L27a [Pseudodiaptomus poplesia] >gi|1148369128|gb|AQS22800.1| 60S ribosomal protein l27a [Pseudodiaptomus poplesia])

HSP 1 Score: 248.44 bits (633), Expect = 9.932e-82
Identity = 119/139 (85.61%), Postives = 125/139 (89.93%), Query Frame = 0 
Query:    1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIK 139
            MST KKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVH N    +CP +NLDKLW+LVSEQTR KY  +  KAPVID SRAGFFKVLGKG LPKQPVIVKARFFSR+AEEKIK
Sbjct:    1 MSTQKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHPNMSIHHCPAINLDKLWTLVSEQTRKKYADSKDKAPVIDCSRAGFFKVLGKGVLPKQPVIVKARFFSRRAEEKIK 139
[Close]
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|961374966|gb|ALS04227.1| (60S ribosomal protein L27a [Acartia pacifica])

HSP 1 Score: 246.514 bits (628), Expect = 5.309e-81
Identity = 118/139 (84.89%), Postives = 127/139 (91.37%), Query Frame = 0 
Query:    1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIK 139
            MSTNKKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVH N  NQ+ P +NLDKLW+LV E+TR+K  K+TK APVID S AG+FKVLGKG LPKQPVIVKARFFSR+AEEKIK
Sbjct:    1 MSTNKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHPNVSNQFRPAINLDKLWTLVPEETRVKAAKDTKTAPVIDCSGAGYFKVLGKGILPKQPVIVKARFFSRRAEEKIK 139
[Close]
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|225718318|gb|ACO15005.1| (60S ribosomal protein L27a [Caligus clemensi])

HSP 1 Score: 243.817 bits (621), Expect = 6.964e-80
Identity = 122/141 (86.52%), Postives = 130/141 (92.20%), Query Frame = 0 
Query:    1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKT 141
            MSTNKKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHA+  NQYCP VNLDKLWSLVS+QTR KY K+ KKAPVIDV++AG+FKVLGKG LP QPVIVKAR FSR+AEEKIK  
Sbjct:    1 MSTNKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHAHTANQYCPSVNLDKLWSLVSDQTRDKYAKDKKKAPVIDVTKAGYFKVLGKGLLPDQPVIVKARLFSRKAEEKIKSV 141
[Close]
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|961375782|gb|ALS04635.1| (60S ribosomal protein L27a [Pseudodiaptomus poplesia] >gi|961375784|gb|ALS04636.1| 60S ribosomal protein L27a [Pseudodiaptomus poplesia])

HSP 1 Score: 240.35 bits (612), Expect = 1.481e-78
Identity = 116/139 (83.45%), Postives = 123/139 (88.49%), Query Frame = 0 
Query:    1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIK 139
            MST KKKTRKLRGHVSHGHGR+GKHRKH GGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFH H+N    Y P +NLDKLW+LVSEQTR KY  +  KAPVID SRAG FKVLGKG+LPKQPVIVKARFFSR+AEEKIK
Sbjct:    1 MSTCKKKTRKLRGHVSHGHGRIGKHRKHSGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHKHSNLAVYYSPTINLDKLWTLVSEQTRKKYADSKDKAPVIDCSRAGIFKVLGKGSLPKQPVIVKARFFSRRAEEKIK 139
[Close]
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|961376440|gb|ALS04964.1| (60S ribosomal protein L27a [Pseudodiaptomus poplesia])

HSP 1 Score: 237.654 bits (605), Expect = 1.494e-77
Identity = 115/139 (82.73%), Postives = 120/139 (86.33%), Query Frame = 0 
Query:    1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIK 139
            MST  KKTRKL GHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVH N    +CP +NLDKLW+LVSEQT  KY     KAPVID S AGFFKVLGKG LPKQPVIVKARFFSR+AEEKIK
Sbjct:    1 MSTQNKKTRKLPGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHPNMSIHHCPAINLDKLWTLVSEQTMKKYADRKDKAPVIDCSIAGFFKVLGKGVLPKQPVIVKARFFSRRAEEKIK 139
[Close]
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|559373032|gb|AHB12474.1| (60S Ribosomal Protein L27A [Pantala flavescens])

HSP 1 Score: 237.654 bits (605), Expect = 1.796e-77
Identity = 113/139 (81.29%), Postives = 128/139 (92.09%), Query Frame = 0 
Query:    1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIK 139
            MST+KKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGG HHHRINFDKYHPGYFGKVGMRNFH+  N+   +CP +NLDKLW+LVSEQTRLKY++N +KAPVIDV +AG++KVLGKG LPKQPVIV+A+FFSR AEEKIK
Sbjct:    1 MSTHKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLRKNK--LWCPSINLDKLWTLVSEQTRLKYKENKEKAPVIDVVKAGYYKVLGKGRLPKQPVIVRAKFFSRSAEEKIK 137
The following BLAST results are available for this feature:
BLAST of 60s ribosomal protein l27a vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000125392.760e-8787.23supercontig:LSalAtl2s:LSalAtl2s923:150712:153740:1... [more]
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BLAST of 60s ribosomal protein l27a vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|75060399|sp|Q56K03.3|RL27A_BOVIN2.418e-7376.43RecName: Full=60S ribosomal protein L27a[more]
gi|306526288|sp|P14115.5|RL27A_MOUSE4.514e-7376.43RecName: Full=60S ribosomal protein L27a; AltName:... [more]
gi|75076570|sp|Q4R723.1|RL27A_MACFA4.563e-7376.43RecName: Full=60S ribosomal protein L27a[more]
gi|1173017|sp|P46776.2|RL27A_HUMAN1.157e-7275.71RecName: Full=60S ribosomal protein L27a; AltName:... [more]
gi|59800187|sp|Q5R1X0.3|RL27A_PANTR2.022e-7275.71RecName: Full=60S ribosomal protein L27a[more]
gi|1350712|sp|P47830.2|RL27A_XENLA2.232e-7275.00RecName: Full=60S ribosomal protein L27a; AltName:... [more]
gi|132846|sp|P18445.3|RL27A_RAT2.659e-7275.71RecName: Full=60S ribosomal protein L27a[more]
gi|3122699|sp|O01358.1|RL27A_OSCTI3.083e-6671.22RecName: Full=60S ribosomal protein L27a; AltName:... [more]
gi|20455458|sp|P41092.2|RL27A_DROME9.709e-6466.67RecName: Full=60S ribosomal protein L27a[more]
gi|2500273|sp|Q27021.1|RL27A_TENMO8.138e-6266.43RecName: Full=60S ribosomal protein L27a[more]

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BLAST of 60s ribosomal protein l27a vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|225712762|gb|ACO12227.1|2.505e-8588.4960S ribosomal protein L27a [Lepeophtheirus salmoni... [more]
gi|961374964|gb|ALS04226.1|4.988e-8385.6160S ribosomal protein L27a [Acartia pacifica][more]
gi|1325300846|ref|XP_023332015.1|1.017e-8287.0560S ribosomal protein L27a-like [Eurytemora affini... [more]
gi|961376548|gb|ALS05018.1|4.609e-8284.8960S ribosomal protein L27a [Centropages dorsispina... [more]
gi|961375786|gb|ALS04637.1|9.932e-8285.6160S ribosomal protein L27a [Pseudodiaptomus poples... [more]
gi|961374966|gb|ALS04227.1|5.309e-8184.8960S ribosomal protein L27a [Acartia pacifica][more]
gi|225718318|gb|ACO15005.1|6.964e-8086.5260S ribosomal protein L27a [Caligus clemensi][more]
gi|961375782|gb|ALS04635.1|1.481e-7883.4560S ribosomal protein L27a [Pseudodiaptomus poples... [more]
gi|961376440|gb|ALS04964.1|1.494e-7782.7360S ribosomal protein L27a [Pseudodiaptomus poples... [more]
gi|559373032|gb|AHB12474.1|1.796e-7781.2960S Ribosomal Protein L27A [Pantala flavescens][more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold127_size327531supercontigscaffold127_size327531:242568..248881 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold127_size327531-processed-gene-2.17-mRNA-1snap_masked-scaffold127_size327531-processed-gene-2.17-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold127_size327531:242568..248881-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold127_size327531-processed-gene-2.17 ID=snap_masked-scaffold127_size327531-processed-gene-2.17|Name=60s ribosomal protein l27a|organism=Tigriopus kingsejongensis|type=gene|length=6314bp|location=Sequence derived from alignment at scaffold127_size327531:242568..248881- (Tigriopus kingsejongensis)
ATGAGTACGAATAAGAAGAAGACCAGGAAGCTCCGTGGGCACGTGTCCCA
TGGACACGGTCGCGTCGGCAAGCACCGCAAGCATCCCGGAGGTCGCGGAA
ACGCTGGTGGACAGCATCATCACCGCATCAATTTCGACAAGTATCATCCG
GGTTACTTCGGCAAGGTGGGCATGAGGAACTTCCACGTCCACGCCAATCA
GCCCAACCAGTACTGCCCCGGAGTGAATCTGGACAAGCTGTGGTCTCTGG
TGAGCGAGCAAACTCGCCTCAAGTACGAGAAGAACACCAAGAAGGCTCCC
GTCATCGACGTGTCCAGGGCCGGTTTCTTCAAGGTGCTCGGCAAGGGCAA
TCTGCCCAAGCAGCCCGTCATTGTGAAGGCTCGATTCTTCTCGCGTCAAG
CCGAAGAGAAGATCAAGAAAGTGGGTGGTGCCTGCGTTCTGACCGCCTAA
GGCGGATTATTAATGAATGAGAATACACGCTTGGACCTTATTGACCTCGA
TAGGGATAACACCTGTGGCTATTTCAGCTACAATTTCACCGCGACAAAGG
TTTAAACTCGTGTTTGAAGAATTAACCGTTCGCCTAAAAGAACGCTCGAG
CATGGGGGTTAAGATCGGATCTTCGTGTGAGAGGCACTCTCATCCATGAT
TAAGTTCACACTTCATTGCTGCTGTCCGCCAATGTTTATCTAGCGAGCAT
AATTGGATTCCCCATTTTTGTGAAAATGAGTGGCTCGCAATCGATCCCAA
GAACAGGGAACTCTGGCAAATAACAGGCATTCACATGGGATGTAGATTCC
GGGTGTTCGTAAGGTTAGAGGATTAAGAAGTACATTATTTTACCTTCTGG
AGACGCTTGCGAAAATCTTGTGTGGACTGGATCGAGTCTTTCATTCTCGG
TGGCCATTGTGACTTCTTGAGAAGCTCCTTCTGACGCAACTCTTGTTGGA
GTAGACGATAATTGGCGGCCTCCTTCTGCTTCTCGTAAGCGTAATTGGTA
AAAATGTGGGCAGGAAACTCCTTGGGCTTCATTTTGACCGTCCGGAGATC
AGGGGTGGATTGGGATTTGCGAAAGAAAAAGCTTTTCCGTGTCCTAGGGA
ACCTGGATCAGGAAGAATACACATAAGAATGTTTAGACAGGGATGAGAGT
GGTTGGCTACGTATTAGAATGTATTGGGATACGGATTACCTTTGTGGGTT
TTCTGCCACCATTTCGCTGAACAATGGACGATTGACATGGTCGGGGACGG
CCCTGGCCTGGAAATGGTGACGCTTCGGCTTATCTCGATGGGCAGCATTG
GGATTAGGTATTAGACCCTCCTTCCTCATCACATCCAGAACAGTAGCCCG
ATCCTTCTGTTTTTGCTCTTCCCTGGTAAACATGTATTCACGAAGAAAAA
AGTCATTGAATCTCAAAAAGAAGACGCGTAAAATATGTCATGCCTCCAGT
GAGAGTCGAACTCACGACCCCTGGTTTACGAGACCAGTGCTCTGCCACTG
AGCTATAGAGGCTTCGTATGAATTAAGGAAAGGAATTTTAATCATAAACG
GTTCTAACCTTGAACAATTTGCGTTGAAAATTGAGCGACAAGAATGCTAA
ATCCGTTTTGGTCTCTGGTTGCAGAAGTAATTTGCCCAATCAGCTCATTA
ACACCTAATCACATTGTTCAACCCCCGAGCGTCTAAGTTACGTCTAACAT
ACTGTACATTGCAAGCCCCAACCTAAGTTTTCGTATTTCCTTCACATGTA
ACTTTCTTTAAGGGCTCGAATCCTTTGGTTATAGACAATCTTCTCTATTT
TATATATGGATATGGGGGTTGGAAAAGAGGTAAAAGCTACTCTGTTCCCG
TCTTTTAATGAGAGCGGAACGAAGTGAGCGCCCTTGTGTATGAAAAAGTG
CAGGTGCAGAAGGTCCTTACGTTGCCGCGCTAATCTGATGCACCACGTTC
AAAGCATTACAAGGCACTTACCAAAAAATCTAAAATTCGCTGAAGCTCCC
AAATTGGTTTCATTGTTTCTCAAAAGGTAAAAGTTCACTTTTTAAGCCTC
CGTGGGGCTCTGATGTAATCCATGTATTCATGATTTACGTAAACCTCTTA
AGGAAATCTGGTCGGACGAAATTTAGGCCCATACTGCTTCCAATGCCTGT
CCATTTGTGTTTTGAAAATGGCGAATGAATTGGATTCGAGGGAAAATAAA
GAGTCTTGAGATGATTTTTTTAAAGTTTGATATAGCACTTGCATTCGTGA
ATGCTTCAGCCAGAGTCCCATTTACGCTCGAAGCCTTACCTCAGGGTCAT
TTGGAAGGGTTGGACGGCTATGGGTTTGACCCTCCTCTCCAGGGTTGAAG
CACTTTGGGCTCTGCGCCTCCTTTGGACCTTCCTCCGTTCATAGTGCATC
TCGAACTCTTCATCTTCAGAATTAGAGTCAACGCAATCAAATAGTTCCAG
TCCACCATTAGGCAGATGTGCTGGAGGAGCATTCGCGGAGTTGTGATAGT
CTGGACAAGTGTAGGACCAATCGGGACCACAGCCCGGCGAACAGCAACAA
CAACAAAGCTCTTGAGCCTGCATGTCCTCTTGGTTAATTCGCTCCAAGCG
TTCCAAGTTGTCCCGTTTGAGCTTTTCCAGGCGCTCCAAGAACCCAAGAC
CCTCGTCGGGACACGAACACTCGCGGTAGAGCCCGGGTTCGTATCCCTCC
ATGTTGGGTGTGAACTCCTCGGGGTATTCGGTCCAGAAATCACACGGCCA
TGAAGGCGCTGCAGGGTCGCTCTCAGAGGTGAGTGATTCATCCTCGGTCT
CGGTGGCGGTTCCAAATCCAGGTATCATCTCCACTGAGGATGAAGATGCT
GGCGGTGGATAGCGAAGAATCTGTGGGTCTTCGTTGAACGTCAAATGCTT
GCTACCTCCAAAGCGCTCCTCGGAAAGTTTGCGCTCATAAAGTGGTTTGG
GCATATGAGTGCGTTTGTCCAGAGGGGTCTTGATGCAGTGATTGGCAAAC
TGGGTAAAGGTGGACGGCATTTTCGTACATAACCGCTCGGGCGGCAATAT
CAACAACATGTATAACGAGGAATGCGTGTAGTGTTGGCCTTATAGAGAGC
CTTTCTCGATATCCTACCTCTTGGACCGCTCGCTTTCCCCTCCAAATTGG
GGGTGGTGGAACAGAAGCCTTCATTTCGGCCCTCGCTAGGGGAAAGTCTA
CTCCTAGAGGTGAGTCCAAGGTATCGTCCACCGAGGTTTGCATGGTTTTG
GGTCCTTTGTAAGTCTTGAACGATAATATCCCCTTTTATCTAATGCCTCT
GATAGAAGCCGAAGCAATCGTCTCCTATCATGGCACATGGAACCAAATCG
AATCCCAACCTTTGAGAAGTCCACTACACATGTTGGTCCTGCGTTAGTAA
CTGTGTCTCACAGTTGAAAAACTTGCCAAATTTAAGGAAAAACATAGGCA
CATAATTGTTCAATCCTGCTGCGTCAACTGTGCCAGTCTTCACTTGACTC
GTTTACACGTCACCTGTTTCAACTATAATATGCCAATTGTAGTAACCCAA
ATCGTTGGAATGTATTGGCAAAAGGGATATTTTTACAGTACCAGCGCGTT
GCATTTTACCTGATTTTGGAGGACACCTTTTTGAAAACACTTTCTTTTAG
GCTGCACTGGTCTTGAGCTAATATTTTTCGTTGCTTGTGACAATGTGAAA
AAGTCAAACGACAGAAAAGAGTGTGGATAGAAAAGCACTTGGGGAATCTA
TGATGTAATCGGCAATCACAGTGTACGTAAATGTAACAATGCGCCTGTTG
ACCAATTCATAATTTGACTGATTGGGTGCAATGTCAATTAATGAGCGATT
CAAAACGTGAAAAAATACTCGTTTATTAAACTATTATTGCTTTAACAAAC
AAGCAAGAACAGTTATGCGAAAGGTTATCCTGCCCGAAACACACTGGGAA
CCAAATCAACGGTTTGAAATCCCAATTTCCCTGTTAATTGTGCTGCATAT
GCATAAAACGGAAGAATAACAATTTAGCATAATAAATTCACATCCCTACT
TATTACATATTGGGGATGGGAAATTTATTTTCTTCCTGTCAAACAGTCAG
GGTGACCGCCGTCAATCACTCTGCCTATTTTAAAGTTAGTGGAAACTCAA
TTTACAATTCTTTCACGCATTGCAAAACTATGAATGTTAGCTTGAACATT
CATAGAATGCAAGGCAACAATTACACTCAGGATTTAAAGACACTCCCAAC
GACTAGAGGGCATTCCAACATTTACAGAAATTGGCTGTCTTTGGTCACCC
ATCTTCACCTGAAAACGAGGCCATGGCTGTTAATGGCTGTGTGTGGACAC
CGAAGTTTAATGCGAAAAAAGATTTCCTCTACCACCCTCGGAAAACGGTT
TAAACTTAAAAACTATTGAGTATCTTGCGAAAGGGGGACTTCGAGTTCGT
TTAGGGCAGATTTTTTTGGGATATAAAAGTAGAGGGAGGCCTGGGTTGAT
GTGAATTGGTGTCCAGTATGATTCATTTTCAGACCTCATTTTCAAGCACT
AATACACTCCTGATGTTCTCGACCACGAAGCACAAATTAATTGGCATTAT
TGCTATCTCGTCATATCTGCACTAAAACATGATAAAACTATAGCCAAATG
TCGTATGAACAAGCATATAACTCAGGAGGGATAACTTTTTGGAGGTGATA
TTGGATTTAGAGTCAGAACCGCTATCTTTTTTCAAGTTACGTTGGTTAGA
AACTTCCGGATACTATCATGGAAGTCAACTCTGGTACTTGTTTTGCGTGT
AATATAGTTACTCCCTCAATTTTTAGCATAGTCGTCCTCAGGTCTGTCCA
CAAGTTCGCTCGAAGCGCCTCCTGTGGCACAAAAGTGAACCACTTATGAC
GTTTCGTTTCACATCAGGAATAGGCCGAACTCATACTCCCAAGGCATTTC
CCTGCTCTTCAATCGATGATGAGATGGGCTAATTGTTTTTAGTCAATACT
CACAAATGGCTTTGAGGGGAGATCTTTTTTTAGACCTGTTATGTTCCCTG
CCACTCTAATACGTATGTATTGTACAGTATGTAGCGTAGACGCATCCTCG
CTCCATCTTATTTTCTTCTTGTGATCTTCCTTTTACCTTGAATAAAGTTC
ATATCTATCCTCGGGACATCCTCGGAACAAAAGAGAACCCTCCATATTGG
TTTCCAAGTGAATATGTTTCATAGTGTACTTCATTTGCACCCACATGCGA
ATTTGTTGGAATTCTTCCATTCCCCAAAAATGTATCACTTTCTGTGGCAT
AATGTTCAGGCTCATTTGTGTGATGTTCAACCTCTGACATCAATAGTATC
TCGAAAAAACACATGTGGAAGAGTATTATCAGGAAAACGAAGCTGAGTGT
GTTTCATTGTGTTGAAAGCAACTCCCCTCAGAGTGGATCTGCCGACAATT
CTAAATTTTGTCGCTGAAAACATTACTATTGGAAGAAGGGCTTTATGGAT
TAGATTGACTCTGACCTGTGAACATAGCAGCGAAATTAGAAGGTAATAAA
GTTTAAAATGATCATTGATTGGGAATTTTTACAGCACCTATGTCTGCTTT
AATCCGAACAATAAAACTCTTGAGTCCACCACACACTCTCTCGTGCAGCG
CAAGTACGTTCAGTACGACGTCTTAATTGCTTATAGACAGTTAAGGATCT
TGGCCAAGGATGAGTGTGAATGGGATTTCGATTAAGAATTCAATTGTATT
CTGAGCACAGTGCACACTTGCAGGAGACAAACAATACTCGATCATCGTAC
CCTTCCTTGACTATTACTTGGCGCGCAAGTGTGTTACTAAGTGATTGGCG
TGAACCATAATAAGCTTTGTAATGTGTATGTGTGTTCAATCTAGCATGTG
TCTTTGTCGCACATGGATTAACACTGAGCCACAAAGTACAAATGCAATAC
CGAGTGCCTGGTATTTTATGACGCTTTTTTGATTGGCAAATGTCAGTCGG
CGAATTGAACGCATTTCCAAATTTTGTGATGATCAGGCTTTAAGCGTCAT
TCTTCTGACTAAACTGGGGGGCTAAATCAAACATTGAGGGCTTTCTCAGC
AACTCTAGAGACAAATCTATAAGTGAATCAAATCGGGTTTAATCTGCAAA
TGCAGACTGAGTGTTTGGATGAATATAAGCAAATTCTTCAAAAAGTGTGG
GTGCCGGCGAGGTTGGGCCAATTGAACCAGCAGAGGTTGTGGCTGAGGAA
CCACTTCGTGACAGGGTTGTCTCAGAGCTACTCGGCCCAGATGGAGTTGT
GTCGGGTACTCTGA
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Synonyms
The feature '60s ribosomal protein l27a' has the following synonyms
Synonym
Tk07886
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