rho gtpase-activating protein, snap_masked-scaffold180_size281610-processed-gene-0.4 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of rho gtpase-activating protein vs. L. salmonis genes
Match: EMLSAG00000004287 (supercontig:LSalAtl2s:LSalAtl2s224:572617:599340:-1 gene:EMLSAG00000004287 transcript:EMLSAT00000004287 description:"maker-LSalAtl2s224-snap-gene-6.18") HSP 1 Score: 438.728 bits (1127), Expect = 1.023e-146 Identity = 218/300 (72.67%), Postives = 244/300 (81.33%), Query Frame = 0 Query: 11 RVKFGVPLDQVCKRDIPGPLLVMLLKLNKEGPFKKDVFRAPGHQGNMRKLIHFLQQGRLVNIHGFSVNTIASVLKKFLRKIPGGIFGPENEAELFSIVKVDNKEERLAKIQSVFMSLPIYSQHLLVLLFGTFREIHRNSERAQTGMTAEALGVSVAPSFFQTCVAGGKTAKMEDVERFKLATKVTTFFIDHFGIRELFGRENYEYYAKLSGRILRVEDEWIFFTYPPVAFGSGTRDDMDPSLDCLGSNGED-RHPTAALEKTGSLEIIPENCTLDPQGRLSISLDD--QNVSTPSSCGSP 307 +VKFGVPLDQVCK+DIPGPLLVMLLKLNKEGPFK+DVFRAPGHQGNMRKL+HFLQQGRLVNIH FSVNTIASVLKKFLRKIPGGIFGPENE ELF+I++++N E +L ++ + + LPIYSQHLLVLLFGTFR IH NS +AQTGM+AEALG S LATKVTTFFI+HFGIR LFGR+NYEYYAKL+GRIL+VEDEWIFFT PPV G G+RDDM PSL+ + S+ E T +LEKTGSLEIIPENC LDPQGRLSISLDD QNVS+PSSCGSP Sbjct: 29 KVKFGVPLDQVCKKDIPGPLLVMLLKLNKEGPFKRDVFRAPGHQGNMRKLVHFLQQGRLVNIHTFSVNTIASVLKKFLRKIPGGIFGPENEKELFTIIRMENTEAKLERVHQLLLDLPIYSQHLLVLLFGTFRVIHSNSVKAQTGMSAEALGXS-------------------------LATKVTTFFIEHFGIRNLFGRDNYEYYAKLTGRILKVEDEWIFFTXPPVILG-GSRDDMXPSLNRIPSDDEGCGGGTRSLEKTGSLEIIPENCPLDPQGRLSISLDDHQQNVSSPSSCGSP 302 HSP 2 Score: 63.5438 bits (153), Expect = 1.177e-10 Identity = 37/69 (53.62%), Postives = 42/69 (60.87%), Query Frame = 0 Query: 369 QVHQKQTERMKHRSEWFLSDASGLVTVKC-----GLRSHTPGGEGGS--SSSRPSSLLSTSTNTPISNV 430 QVH++QTERMKHRSEWFLSD SGLVTVKC L T G + RPSSL N ++NV Sbjct: 408 QVHERQTERMKHRSEWFLSDPSGLVTVKCRPGPLALPLQTVSATTGWRICNERPSSLPGQVKNPQVTNV 476 HSP 3 Score: 58.5362 bits (140), Expect = 3.823e-9 Identity = 28/44 (63.64%), Postives = 35/44 (79.55%), Query Frame = 0 Query: 529 SPPIQSTPLPQATVSLRRRLSDKERRLVRRSSSKKKDKENGGSP 572 +P + + ++ +LRRRLSDKERRLVRRSSSK+KDKENGG P Sbjct: 470 NPQVTNVSTGSSSCNLRRRLSDKERRLVRRSSSKRKDKENGGGP 513
BLAST of rho gtpase-activating protein vs. SwissProt
Match: gi|143458429|sp|Q9P2F6.2|RHG20_HUMAN (RecName: Full=Rho GTPase-activating protein 20; AltName: Full=Rho-type GTPase-activating protein 20) HSP 1 Score: 107.071 bits (266), Expect = 1.340e-22 Identity = 70/210 (33.33%), Postives = 105/210 (50.00%), Query Frame = 0 Query: 14 FGVPLDQVCKRD-IPGPLLVMLLKLNKEGPFKKDVFRAPGHQGNMRKLIHFLQQGRLVNIHGFSVNTIASVLKKFLRKIPGGIFGPENEAELFSIVKVDNKEERLAKIQSVFMSLPIYSQHLLVLLFGTFREIHRNSERAQTGMTAEALGVSVAPSFFQTCVAGGKTAKMEDVERFKLATKVTTFFIDHFGIRELFGRENYEYYAKLSGR 222 FG+ L +C+ D +P P+L ML LN++GP K +FR + + R+L L G V++ S+ IASVLK FLR IPG IF + S++ N EE++ +Q + LP + LL LFG I ++S Q MTA L V VAPS + + E ++ L + F I++ +FG E + ++S R Sbjct: 363 FGISLPNICENDNLPKPVLDMLFFLNQKGPLTKGIFRQSANVKSCRELKEKLNSGVEVHLDCESIFVIASVLKDFLRNIPGSIFSSDLYDHWVSVMDQGNDEEKINTVQRLLDQLPRANVVLLRYLFGVLHNIEQHSSSNQ--MTAFNLAVCVAPSILWPPASSSPELENEFTKKVSL---LIQFLIEN--CLRIFGEEITSLFREVSVR 565
BLAST of rho gtpase-activating protein vs. SwissProt
Match: gi|143458599|sp|Q6REY9.2|RHG20_RAT (RecName: Full=Rho GTPase-activating protein 20; AltName: Full=RA and RhoGAP domain-containing protein; Short=RARhoGAP; AltName: Full=Rho-type GTPase-activating protein 20) HSP 1 Score: 100.908 bits (250), Expect = 1.367e-20 Identity = 69/210 (32.86%), Postives = 101/210 (48.10%), Query Frame = 0 Query: 14 FGVPLDQVCKRD-IPGPLLVMLLKLNKEGPFKKDVFRAPGHQGNMRKLIHFLQQGRLVNIHGFSVNTIASVLKKFLRKIPGGIFGPENEAELFSIVKVDNKEERLAKIQSVFMSLPIYSQHLLVLLFGTFREIHRNSERAQTGMTAEALGVSVAPSFFQTCVAGGKTAKMEDVERFKLATKVTTFFIDHFGIRELFGRENYEYYAKLSGR 222 FGV L +C+ D +P P+L ML LN++GP K +FR + + R+L L G V++ S+ IASVLK FLR IP IF + ++ N EE++ IQ + LP + L LFG I ++S Q MTA L V +APS + + E ++ L + F I++ +FG E +LS R Sbjct: 363 FGVSLPDICENDNLPKPILDMLSFLNQKGPLTKGIFRQSANMKSCRELKEKLNSGIEVHLDCESIFVIASVLKDFLRNIPESIFSSDLYDHWVCVMDQGNDEEKINTIQRLLDQLPRANVVFLRYLFGVLHNIEQHSLSNQ--MTAFNLAVCIAPSILWPPASSSPELENEFTKKVSL---LIQFLIENCC--RIFGEEITSLLGELSER 565
BLAST of rho gtpase-activating protein vs. SwissProt
Match: gi|81911027|sp|Q6IFT4.1|RHG20_MOUSE (RecName: Full=Rho GTPase-activating protein 20; AltName: Full=RA and RhoGAP domain-containing protein; Short=RARhoGAP; AltName: Full=Rho-type GTPase-activating protein 20) HSP 1 Score: 98.5969 bits (244), Expect = 5.636e-20 Identity = 69/210 (32.86%), Postives = 101/210 (48.10%), Query Frame = 0 Query: 14 FGVPLDQVCKRD-IPGPLLVMLLKLNKEGPFKKDVFRAPGHQGNMRKLIHFLQQGRLVNIHGFSVNTIASVLKKFLRKIPGGIFGPENEAELFSIVKVDNKEERLAKIQSVFMSLPIYSQHLLVLLFGTFREIHRNSERAQTGMTAEALGVSVAPSFFQTCVAGGKTAKMEDVERFKLATKVTTFFIDHFGIRELFGRENYEYYAKLSGR 222 FGV L +C+ D +P P+L ML LN++GP K +FR + + R+L L G V++ S+ IASVLK FLR IP IF + ++ N EE++ IQ + LP + L LFG I ++S Q MTA L V +APS + + E ++ L + F I++ +FG E +LS R Sbjct: 363 FGVSLPDLCENDNLPKPILDMLSFLNQKGPLTKGIFRQSANMKSCRELKEKLNSGIEVHLDCESIFVIASVLKDFLRNIPESIFSSDLYDHWVCVMDQGNDEEKINIIQRLLDQLPRANVVFLRYLFGVLHNIEQHSLSNQ--MTAFNLAVCIAPSILWPPASSSPELENEFTKKVSL---LIQFLIENCC--RVFGEEIASLLGELSER 565
BLAST of rho gtpase-activating protein vs. SwissProt
Match: gi|74750874|sp|Q8N103.1|TAGAP_HUMAN (RecName: Full=T-cell activation Rho GTPase-activating protein; AltName: Full=T-cell activation GTPase-activating protein) HSP 1 Score: 62.3882 bits (150), Expect = 9.259e-9 Identity = 54/212 (25.47%), Postives = 97/212 (45.75%), Query Frame = 0 Query: 14 FGVPLDQVC--KRDIPGPLLVMLLKLNKEGPFKKDVFRAPGHQGNMRKLIHFLQQGRLVNIHGFSVNTIASVLKKFLRKIPGGIFGPENEAELFSIVKVDNKEERLAKIQSVFMSLPIYSQHLLVLLFGTFREIHRNSERAQTGMTAEALGVSVAPSFFQTCVAGGKTAKMEDVERFKLATKVTT---FFIDHFGIRELFGRENYEYYAKLS 220 F PL +C +P P+ +L L +GP + +FR ++ ++L L G V++ V+ +A V K FLR IP + + E +++ ++E+R+ ++ V LP + LL L I +NSE + M + L + + P+ + ++ E + L KV T F ID+ E+FG EN ++ ++ Sbjct: 86 FDQPLSIICGDSDTLPRPIQDILTILCLKGPSTEGIFRRAANEKARKELKEELNSGDAVDLERLPVHLLAVVFKDFLRSIPRKLLSSDLFEEWMGALEMQDEEDRIEALKQVADKLPRPNLLLLKHLVYVLHLISKNSEVNR--MDSSNLAICIGPNML--TLENDQSLSFE--AQKDLNNKVKTLVEFLIDN--CFEIFG-ENIPVHSSIT 288
BLAST of rho gtpase-activating protein vs. nr
Match: gi|936703116|ref|XP_014229523.1| (uncharacterized protein LOC106654251 isoform X2 [Trichogramma pretiosum]) HSP 1 Score: 392.889 bits (1008), Expect = 1.173e-125 Identity = 214/416 (51.44%), Postives = 271/416 (65.14%), Query Frame = 0 Query: 11 RVKFGVPLDQVCKRDIPGPLLVMLLKLNKEGPFKKDVFRAPGHQGNMRKLIHFLQQGRLVNIHGFSVNTIASVLKKFLRKIPGGIFGPENEAELFSIVKVDNKEERLAKIQSVFMSLPIYSQHLLVLLFGTFREIHRNSERAQTGMTAEALGVSVAPSFFQTCVAGGKTAKMEDVERFKLATKVTTFFIDHFGIRELFGRENYEYYAKLSGRILRVEDEWIF-FTYPPVAFGS-GTRDDMDPSLDCLGSNGEDRHPTAALEKTGSLEIIPENCTLDPQGRLSISLDDQNVSTPSSCGSPSVMVGISEVHAAGFRSQTLGRAGPQQHRQLLANAAILQQQSETLPRRPGRDSRSHIAPCLPQVHQKQTERMKHRSEWFLSDASGLVTVKCGLRS--HTPGGEGGSSSSRPSSLLSTS 422 +VKFGVPLD+VCK DIPGPLLV++LKLNKE P +KDVFRAPGHQGNM+KLIHFLQ GRLVN+ FSV TIASVLKKFLRKIPGGIFG E E +LFS++++++ E + +I + SLP+Y+Q LLVLLFGTFR + NSERA+TGMT+EALGVSVAPSFFQ+CV+ GKTAKMEDV RFK+AT+V F ID+FG+ LFGRENYE+YA+++GRIL+VE++WIF F YPP S + + S L H ALE T SL +IPEN L+ RLS+SL++ GF + + H A + + ++ R ++S LPQVH++QT RM+ RSEWFL+ ++V S H G SSS +S LS S Sbjct: 37 KVKFGVPLDEVCKNDIPGPLLVLILKLNKEAPLRKDVFRAPGHQGNMKKLIHFLQTGRLVNMDNFSVYTIASVLKKFLRKIPGGIFGKEGEQQLFSVIQLESIEHQRDQIHKLITSLPLYTQRLLVLLFGTFRVVAVNSERARTGMTSEALGVSVAPSFFQSCVSDGKTAKMEDVLRFKVATRVMKFMIDNFGVSNLFGRENYEFYARITGRILKVEEDWIFSFRYPPDTLVSPMSHQEESQSTPALI------HVPEALELTSSLGMIPENTLLESYTRLSVSLEEN-----------------------GFFQASSRSSSNGSHHSRHAEMTLDELRA---VNRYAESTKS--LSYLPQVHERQTARMRTRSEWFLTPVGERISVTDSDSSALHVLRGSNRSSSGNIASGLSAS 418
BLAST of rho gtpase-activating protein vs. nr
Match: gi|607356965|gb|EZA51448.1| (Rho GTPase-activating protein [Ooceraea biroi]) HSP 1 Score: 391.349 bits (1004), Expect = 9.282e-125 Identity = 203/403 (50.37%), Postives = 262/403 (65.01%), Query Frame = 0 Query: 7 YKFCRVKFGVPLDQVCKRDIPGPLLVMLLKLNKEGPFKKDVFRAPGHQGNMRKLIHFLQQGRLVNIHGFSVNTIASVLKKFLRKIPGGIFGPENEAELFSIVKVDNKEERLAKIQSVFMSLPIYSQHLLVLLFGTFREIHRNSERAQTGMTAEALGVSVAPSFFQTCVAGGKTAKMEDVERFKLATKVTTFFIDHFGIRELFGRENYEYYAKLSGRILRVEDEWIF-FTYPPVAFGS---------------GTRDDMDPSLDCLGSNGEDR------HPTAALEKTGSLEIIPENCTLDPQGRLSISLDDQNVSTPSSCGSPSVMVGISEVHAAGFRSQTLGRAGPQQHRQLLANAAILQQQSETLPRRPGRDSRSHIAPCLPQVHQKQTERMKHRSEWFLS 387 + F RVKFGVPLD+VCK DIPGPLLV++LKLNKE P KKD+FRAPGHQGNM+KLIHFLQ G LVN+ FSV TIASVLKKFL KIPGG+FG ENE +LF+++++D+ E++ +I + SLPIY+Q LLVLLFGTFR + NSERA TGMT+EALGVSVAPSFFQ+CV+ GKTAKMEDV RFK+AT+VT F ID+FG+ LFGR NYE+YA+++GRIL+VE++WIF F YPP S + + +L+C+ E + H ++ T SL +IPEN L+ RLS+SL++ + SS S + HA ++ R + R ++S LPQVH++Q RM+ RSEWFL+ Sbjct: 7 FLFRRVKFGVPLDEVCKNDIPGPLLVLILKLNKEAPLKKDIFRAPGHQGNMKKLIHFLQTGHLVNMDNFSVYTIASVLKKFLCKIPGGVFGKENEMQLFTVIQLDSIEQQRDQIHKLITSLPIYTQRLLVLLFGTFRVVAVNSERAHTGMTSEALGVSVAPSFFQSCVSDGKTAKMEDVLRFKVATRVTKFMIDNFGVSNLFGRHNYEFYARITGRILKVEEDWIFSFRYPPATLVSRQLSLEAEKTWLQFECQKLGLKLNLECMSQQEESQSTPALIHMPETVDLTSSLGMIPENTLLESCTRLSVSLEENGLFQVSSRSSSNGSHHSKRSHAVTL----------EELRAM---------------NRYAESTKS--LSYLPQVHERQAARMRTRSEWFLT 382
BLAST of rho gtpase-activating protein vs. nr
Match: gi|936703114|ref|XP_014229520.1| (uncharacterized protein LOC106654251 isoform X1 [Trichogramma pretiosum]) HSP 1 Score: 391.349 bits (1004), Expect = 1.152e-124 Identity = 215/436 (49.31%), Postives = 275/436 (63.07%), Query Frame = 0 Query: 11 RVKFGVPLDQVCKRDIPGPLLVMLLKLNKEGPFKKDVFRAPGHQGNMRKLIHFLQQGRLVNIHGFSVNTIASVLKKFLRKIPGGIFGPENEAELFSIVKVDNKEERLAKIQSVFMSLPIYSQHLLVLLFGTFREIHRNSERAQTGMTAEALGVSVAPSFFQTCVAGGKTAKMEDVERFKLATKVTTFFIDHFGIRELFGRENYEYYAKLSGRILRVEDEWIF-FTYPPVAFGS---------------GTRDDMDPSLDCLGSNGEDR------HPTAALEKTGSLEIIPENCTLDPQGRLSISLDDQNVSTPSSCGSPSVMVGISEVHAAGFRSQTLGRAGPQQHRQLLANAAILQQQSETLPRRPGRDSRSHIAPCLPQVHQKQTERMKHRSEWFLSDASGLVTVKCGLRS--HTPGGEGGSSSSRPSSLLSTS 422 +VKFGVPLD+VCK DIPGPLLV++LKLNKE P +KDVFRAPGHQGNM+KLIHFLQ GRLVN+ FSV TIASVLKKFLRKIPGGIFG E E +LFS++++++ E + +I + SLP+Y+Q LLVLLFGTFR + NSERA+TGMT+EALGVSVAPSFFQ+CV+ GKTAKMEDV RFK+AT+V F ID+FG+ LFGRENYE+YA+++GRIL+VE++WIF F YPP S R + +L+ + E + H ALE T SL +IPEN L+ RLS+SL++ GF + + H A + + ++ R ++S LPQVH++QT RM+ RSEWFL+ ++V S H G SSS +S LS S Sbjct: 37 KVKFGVPLDEVCKNDIPGPLLVLILKLNKEAPLRKDVFRAPGHQGNMKKLIHFLQTGRLVNMDNFSVYTIASVLKKFLRKIPGGIFGKEGEQQLFSVIQLESIEHQRDQIHKLITSLPLYTQRLLVLLFGTFRVVAVNSERARTGMTSEALGVSVAPSFFQSCVSDGKTAKMEDVLRFKVATRVMKFMIDNFGVSNLFGRENYEFYARITGRILKVEEDWIFSFRYPPDTLVSRQLSLEAEKTWLQYECERWGLKFNLESMSHQEESQSTPALIHVPEALELTSSLGMIPENTLLESYTRLSVSLEEN-----------------------GFFQASSRSSSNGSHHSRHAEMTLDELRA---VNRYAESTKS--LSYLPQVHERQTARMRTRSEWFLTPVGERISVTDSDSSALHVLRGSNRSSSGNIASGLSAS 444
BLAST of rho gtpase-activating protein vs. nr
Match: gi|766936559|ref|XP_011500695.1| (PREDICTED: uncharacterized protein LOC105364468 isoform X2 [Ceratosolen solmsi marchali]) HSP 1 Score: 388.652 bits (997), Expect = 1.176e-123 Identity = 204/402 (50.75%), Postives = 263/402 (65.42%), Query Frame = 0 Query: 11 RVKFGVPLDQVCKRDIPGPLLVMLLKLNKEGPFKKDVFRAPGHQGNMRKLIHFLQQGRLVNIHGFSVNTIASVLKKFLRKIPGGIFGPENEAELFSIVKVDNKEERLAKIQSVFMSLPIYSQHLLVLLFGTFREIHRNSERAQTGMTAEALGVSVAPSFFQTCVAGGKTAKMEDVERFKLATKVTTFFIDHFGIRELFGRENYEYYAKLSGRILRVEDEWIF-FTYPPVAFGS---------------GTRDDMDPSLDCLGSNGEDR------HPTAALEKTGSLEIIPENCTLDPQGRLSISLDDQNVSTPSSCGSPSVMVGISEVHAAGFRSQTLGRAGPQQHRQLLANAAILQQQSETLPRRPGRDSRSHIAPCLPQVHQKQTERMKHRSEWFLSDAS 390 +VKFGVPLD+VCK DIPGPLLV++LKLNKE P +KDVFRAPGHQGNM+KLIHFLQ GRLVN+ FSV TIASVLKKFLRKIPGG+FG E E +LFS++++D+ E++ +I + SLP+Y+Q LLVLLFGTFR + NSERA+TGMT+EALGVSVAPSFFQ+CV+ GKTAKMEDV RFK+AT+V F ID+FG+ LFGRENYE+YA+++GRIL+VE++WIF F YPP S R + +L+ + E + H +LE T SL +IPEN L+ RLS+SL++ GF + + H A + + ++ R ++S LPQVH++QT RM+ RSEWFL+ S Sbjct: 37 KVKFGVPLDEVCKNDIPGPLLVLILKLNKEAPLRKDVFRAPGHQGNMKKLIHFLQTGRLVNMDNFSVYTIASVLKKFLRKIPGGVFGREGEQQLFSVIQLDSIEQQRDQIHKLITSLPVYTQRLLVLLFGTFRVVAVNSERARTGMTSEALGVSVAPSFFQSCVSDGKTAKMEDVLRFKVATRVMKFMIDNFGVSNLFGRENYEFYARITGRILKVEEDWIFSFRYPPDTLVSRQLSLEAEKTWLQYECERWGLKFNLESMSHQEESQSTPALIHVPESLELTSSLGMIPENTLLESYTRLSVSLEEN-----------------------GFFQASSRSSSNGSHHSRHAGMTLDELRA---VNRYAESTKS--LSYLPQVHERQTARMRTRSEWFLTPVS 410
BLAST of rho gtpase-activating protein vs. nr
Match: gi|1325317592|ref|XP_023340540.1| (uncharacterized protein LOC111710655 [Eurytemora affinis]) HSP 1 Score: 387.111 bits (993), Expect = 4.829e-123 Identity = 233/407 (57.25%), Postives = 282/407 (69.29%), Query Frame = 0 Query: 11 RVKFGVPLDQVCKRDIPGPLLVMLLKLNKEGPFKKDVFRAPGHQGNMRKLIHFL-------QQGRLVNIHGFSVNTIASVLKKFLRKIPGGIFGPENEAELFSIVKVDNKEERLAKIQSVFMSLPIYSQHLLVLLFGTFREIHRNSERAQTGMTAEALGVSVAPSFFQTCVAGGKTAKMEDVERFKL------------ATKVTTFFIDHFGIRELFGRENYEYYAKLSGRILRVEDEWIFFTYPPVAFGSGTRDDMDPSLDCLGSNGEDRHPTAALEKTGSLEIIPENCTLDPQGRLSISLDDQ-NVSTPSSCGSPSVMVGISEVHAAGFRSQTLGRAGPQQHRQLLANAAILQQQSETLPRRPGRDSRSHIAPCLPQVHQKQTERMKHRSEWFLSDASGLVTVKC 397 +VKFG L VCK+ IPGPLL++LLKLNKEGPFK+DVFRAPGHQGNMRKLIHFL QQGR++NI FSVNTIASVLKKFLRKIPGGIFGPENE LF +++ N+EER ++Q++ SLP++SQ LLVLLFGTFR I SE+ TGMTAEALGVSVAPSFF TC + GK AKMEDVERFK ATKVT++FI+HFG+ LF ++ YEYYA+L+GRILR+ED++IFFTYP GTRDDM SL+ H + + +TGSLE IPEN TL+ QGRLSISLD + STP S G+++ RS TLGR +QL +N +LQ+ S + + CLPQVH +Q ERMK RS+WFLS+ SGLVTV+ Sbjct: 40 KVKFGGELSMVCKKGIPGPLLLILLKLNKEGPFKRDVFRAPGHQGNMRKLIHFLGGVLNFLQQGRMINIQNFSVNTIASVLKKFLRKIPGGIFGPENERILFQVMRSGNEEERKRRVQNIMNSLPLHSQQLLVLLFGTFRVISTKSEK--TGMTAEALGVSVAPSFFHTC-STGKAAKMEDVERFKEKLIDECVSNIANATKVTSYFIEHFGMTWLFSKDIYEYYARLTGRILRIEDKFIFFTYPLEML--GTRDDMHTSLN---------HRLSDVPETGSLECIPENLTLE-QGRLSISLDQTLSPSTPVS--------GLNQG-----RSATLGRP-----KQLTSN--VLQKTSSE----------TKSSSCLPQVHMRQAERMKARSDWFLSEPSGLVTVRV 401
BLAST of rho gtpase-activating protein vs. nr
Match: gi|759067969|ref|XP_011343473.1| (PREDICTED: uncharacterized protein LOC105282874 isoform X1 [Ooceraea biroi] >gi|759067971|ref|XP_011343474.1| PREDICTED: uncharacterized protein LOC105282874 isoform X1 [Ooceraea biroi]) HSP 1 Score: 387.497 bits (994), Expect = 7.884e-123 Identity = 201/399 (50.38%), Postives = 262/399 (65.66%), Query Frame = 0 Query: 11 RVKFGVPLDQVCKRDIPGPLLVMLLKLNKEGPFKKDVFRAPGHQGNMRKLIHFLQQGRLVNIHGFSVNTIASVLKKFLRKIPGGIFGPENEAELFSIVKVDNKEERLAKIQSVFMSLPIYSQHLLVLLFGTFREIHRNSERAQTGMTAEALGVSVAPSFFQTCVAGGKTAKMEDVERFKLATKVTTFFIDHFGIRELFGRENYEYYAKLSGRILRVEDEWIF-FTYPPVAFGS---------------GTRDDMDPSLDCLGSNGEDR------HPTAALEKTGSLEIIPENCTLDPQGRLSISLDDQNVSTPSSCGSPSVMVGISEVHAAGFRSQTLGRAGPQQHRQLLANAAILQQQSETLPRRPGRDSRSHIAPCLPQVHQKQTERMKHRSEWFLS 387 +VKFGVPLD+VCK DIPGPLLV++LKLNKE P KKD+FRAPGHQGNM+KLIHFLQ G LVN+ FSV TIASVLKKFL KIPGG+FG ENE +LF+++++D+ E++ +I + SLPIY+Q LLVLLFGTFR + NSERA TGMT+EALGVSVAPSFFQ+CV+ GKTAKMEDV RFK+AT+VT F ID+FG+ LFGR NYE+YA+++GRIL+VE++WIF F YPP S + + +L+C+ E + H ++ T SL +IPEN L+ RLS+SL++ G+ +V + S + H L + + +E+ S S+ LPQVH++Q RM+ RSEWFL+ Sbjct: 49 KVKFGVPLDEVCKNDIPGPLLVLILKLNKEAPLKKDIFRAPGHQGNMKKLIHFLQTGHLVNMDNFSVYTIASVLKKFLCKIPGGVFGKENEMQLFTVIQLDSIEQQRDQIHKLITSLPIYTQRLLVLLFGTFRVVAVNSERAHTGMTSEALGVSVAPSFFQSCVSDGKTAKMEDVLRFKVATRVTKFMIDNFGVSNLFGRHNYEFYARITGRILKVEEDWIFSFRYPPATLVSRQLSLEAEKTWLQFECQKLGLKLNLECMSQQEESQSTPALIHMPETVDLTSSLGMIPENTLLESCTRLSVSLEEN---------------GLFQVSSRS--SSNGSHHSKRSHAVTLEELRAMNRYAEST------KSLSY----LPQVHERQAARMRTRSEWFLT 420
BLAST of rho gtpase-activating protein vs. nr
Match: gi|1032757661|ref|XP_016839137.1| (PREDICTED: uncharacterized protein LOC100118685 isoform X2 [Nasonia vitripennis]) HSP 1 Score: 385.571 bits (989), Expect = 2.291e-122 Identity = 202/402 (50.25%), Postives = 261/402 (64.93%), Query Frame = 0 Query: 8 KFCRVKFGVPLDQVCKRDIPGPLLVMLLKLNKEGPFKKDVFRAPGHQGNMRKLIHFLQQGRLVNIHGFSVNTIASVLKKFLRKIPGGIFGPENEAELFSIVKVDNKEERLAKIQSVFMSLPIYSQHLLVLLFGTFREIHRNSERAQTGMTAEALGVSVAPSFFQTCVAGGKTAKMEDVERFKLATKVTTFFIDHFGIRELFGRENYEYYAKLSGRILRVEDEWIF-FTYPPVAFGS---------------GTRDDMDPSLDCLGSNGEDR------HPTAALEKTGSLEIIPENCTLDPQGRLSISLDDQNVSTPSSCGSPSVMVGISEVHAAGFRSQTLGRAGPQQHRQLLANAAILQQQSETLPRRPGRDSRSHIAPCLPQVHQKQTERMKHRSEWFLS 387 + +VKFGVPLD+VCK DIPGPLLV++LKLNKE P +KDVFRAPGHQGNM+KLIHFLQ GRLVN+ FSV TIASVLKKFLRKIPGG+FG E E +LF ++++D+ E++ +I + SLPIY+Q LLVLLFGTFR + NSERA+TGMT+EALGVSVAPSFFQ+CV+ GKTAKMEDV RFK+AT+V F ID+FG+ LFGRENYE+YA+++GRIL+VE+ WIF F YPP S R + +L+ + E + H +L+ T SL +IPEN L+ RLS+SL++ GF + + H A + + ++ R ++S LPQVH++QT RM+ RSEWFL+ Sbjct: 34 RLDKVKFGVPLDEVCKNDIPGPLLVLILKLNKEAPLRKDVFRAPGHQGNMKKLIHFLQTGRLVNMDNFSVYTIASVLKKFLRKIPGGVFGREGEQQLFDVIQLDSIEQQRDQIHKLITSLPIYTQRLLVLLFGTFRVVAVNSERARTGMTSEALGVSVAPSFFQSCVSDGKTAKMEDVLRFKVATRVMKFMIDNFGVSNLFGRENYEFYARITGRILKVEENWIFSFRYPPDTLVSRQLSLEAEKTWLQYECERWGLKFNLESMSHQEESQSTPALIHVPESLDLTSSLGMIPENTLLESYTRLSVSLEEN-----------------------GFFQASSRSSSNGSHHSRHAGMTLDELRA---VNRYAESTKS--LSYLPQVHERQTARMRTRSEWFLT 407
BLAST of rho gtpase-activating protein vs. nr
Match: gi|1227096298|gb|OXU21102.1| (hypothetical protein TSAR_012223 [Trichomalopsis sarcophagae]) HSP 1 Score: 385.571 bits (989), Expect = 2.578e-122 Identity = 202/402 (50.25%), Postives = 261/402 (64.93%), Query Frame = 0 Query: 8 KFCRVKFGVPLDQVCKRDIPGPLLVMLLKLNKEGPFKKDVFRAPGHQGNMRKLIHFLQQGRLVNIHGFSVNTIASVLKKFLRKIPGGIFGPENEAELFSIVKVDNKEERLAKIQSVFMSLPIYSQHLLVLLFGTFREIHRNSERAQTGMTAEALGVSVAPSFFQTCVAGGKTAKMEDVERFKLATKVTTFFIDHFGIRELFGRENYEYYAKLSGRILRVEDEWIF-FTYPPVAFGS---------------GTRDDMDPSLDCLGSNGEDR------HPTAALEKTGSLEIIPENCTLDPQGRLSISLDDQNVSTPSSCGSPSVMVGISEVHAAGFRSQTLGRAGPQQHRQLLANAAILQQQSETLPRRPGRDSRSHIAPCLPQVHQKQTERMKHRSEWFLS 387 + +VKFGVPLD+VCK DIPGPLLV++LKLNKE P +KDVFRAPGHQGNM+KLIHFLQ GRLVN+ FSV TIASVLKKFLRKIPGG+FG E E +LF ++++D+ E++ +I + SLPIY+Q LLVLLFGTFR + NSERA+TGMT+EALGVSVAPSFFQ+CV+ GKTAKMEDV RFK+AT+V F ID+FG+ LFGRENYE+YA+++GRIL+VE+ WIF F YPP S R + +L+ + E + H +L+ T SL +IPEN L+ RLS+SL++ GF + + H A + + ++ R ++S LPQVH++QT RM+ RSEWFL+ Sbjct: 34 RLDKVKFGVPLDEVCKNDIPGPLLVLILKLNKEAPLRKDVFRAPGHQGNMKKLIHFLQTGRLVNMDNFSVYTIASVLKKFLRKIPGGVFGREGEQQLFDVIQLDSIEQQRDQIHKLITSLPIYTQRLLVLLFGTFRVVAVNSERARTGMTSEALGVSVAPSFFQSCVSDGKTAKMEDVLRFKVATRVMKFMIDNFGVSNLFGRENYEFYARITGRILKVEENWIFSFRYPPDTLVSRQLSLEAEKTWLQYECERWGLKFNLESMSHQEESQSTPALIHVPESLDLTSSLGMIPENTLLESYTRLSVSLEEN-----------------------GFFQASSRSSSNGSHHSRHAGMTLDELRA---VNRYAESTKS--LSYLPQVHERQTARMRTRSEWFLT 407
BLAST of rho gtpase-activating protein vs. nr
Match: gi|665796166|ref|XP_008545858.1| (PREDICTED: uncharacterized protein LOC103570037 isoform X1 [Microplitis demolitor]) HSP 1 Score: 385.185 bits (988), Expect = 3.371e-122 Identity = 201/399 (50.38%), Postives = 263/399 (65.91%), Query Frame = 0 Query: 11 RVKFGVPLDQVCKRDIPGPLLVMLLKLNKEGPFKKDVFRAPGHQGNMRKLIHFLQQGRLVNIHGFSVNTIASVLKKFLRKIPGGIFGPENEAELFSIVKVDNKEERLAKIQSVFMSLPIYSQHLLVLLFGTFREIHRNSERAQTGMTAEALGVSVAPSFFQTCVAGGKTAKMEDVERFKLATKVTTFFIDHFGIRELFGRENYEYYAKLSGRILRVEDEWIF-FTYPPVAFGS---------------GTRDDMDPSLDCLGSNGEDR------HPTAALEKTGSLEIIPENCTLDPQGRLSISLDDQNVSTPSSCGSPSVMVGISEVHAAGFRSQTLGRAGPQQHRQLLANAAILQQQSETLPRRPGRDSRSHIAPCLPQVHQKQTERMKHRSEWFLS 387 +VKFGVPLD+VCK DIPGPLLV++LKLNKE P +KDVFRAPGHQGNM+KLIHFLQ GRLVN+ FSV TIASVLKKFLRKIPGG+FG E E +LF+++++D+ E++ +I + SLPIY+Q LLVLLFGTFR + NSERA+TGM++EALGVSVAPSFFQ+CV+ GKTAKMEDV RFK+AT+V F ID+FG+ LFGRENYE+YA+++GRIL+VE++WIF F YPP S R + +L+ + E + H +L+ T SL +IPEN L+ RLS+SL++ G + + H+ +AA+ + + R ++S LPQVH++QT RM+ RSEWFL+ Sbjct: 38 KVKFGVPLDEVCKNDIPGPLLVLILKLNKEAPLRKDVFRAPGHQGNMKKLIHFLQSGRLVNMDNFSVYTIASVLKKFLRKIPGGVFGREGEQQLFTVIQLDSMEQQRDQIHKLITSLPIYTQRLLVLLFGTFRVVAVNSERARTGMSSEALGVSVAPSFFQSCVSDGKTAKMEDVLRFKVATRVMKFMIDNFGVSNLFGRENYEFYARITGRILKVEEDWIFSFRYPPNTLVSRQLSLEAEKTWLQYECERWGLKFNLESMSHQEESQSTPALIHVPESLDLTSSLGMIPENTLLESYTRLSVSLEEN-----------------------GLFHASSRSSSNASHQS--RHAAMTLDELRAV-NRYAESTKS--LSYLPQVHERQTARMRTRSEWFLT 408
BLAST of rho gtpase-activating protein vs. nr
Match: gi|665796168|ref|XP_008545859.1| (PREDICTED: uncharacterized protein LOC103570037 isoform X2 [Microplitis demolitor]) HSP 1 Score: 384.415 bits (986), Expect = 4.424e-122 Identity = 201/399 (50.38%), Postives = 263/399 (65.91%), Query Frame = 0 Query: 11 RVKFGVPLDQVCKRDIPGPLLVMLLKLNKEGPFKKDVFRAPGHQGNMRKLIHFLQQGRLVNIHGFSVNTIASVLKKFLRKIPGGIFGPENEAELFSIVKVDNKEERLAKIQSVFMSLPIYSQHLLVLLFGTFREIHRNSERAQTGMTAEALGVSVAPSFFQTCVAGGKTAKMEDVERFKLATKVTTFFIDHFGIRELFGRENYEYYAKLSGRILRVEDEWIF-FTYPPVAFGS---------------GTRDDMDPSLDCLGSNGEDR------HPTAALEKTGSLEIIPENCTLDPQGRLSISLDDQNVSTPSSCGSPSVMVGISEVHAAGFRSQTLGRAGPQQHRQLLANAAILQQQSETLPRRPGRDSRSHIAPCLPQVHQKQTERMKHRSEWFLS 387 +VKFGVPLD+VCK DIPGPLLV++LKLNKE P +KDVFRAPGHQGNM+KLIHFLQ GRLVN+ FSV TIASVLKKFLRKIPGG+FG E E +LF+++++D+ E++ +I + SLPIY+Q LLVLLFGTFR + NSERA+TGM++EALGVSVAPSFFQ+CV+ GKTAKMEDV RFK+AT+V F ID+FG+ LFGRENYE+YA+++GRIL+VE++WIF F YPP S R + +L+ + E + H +L+ T SL +IPEN L+ RLS+SL++ G + + H+ +AA+ + + R ++S LPQVH++QT RM+ RSEWFL+ Sbjct: 30 KVKFGVPLDEVCKNDIPGPLLVLILKLNKEAPLRKDVFRAPGHQGNMKKLIHFLQSGRLVNMDNFSVYTIASVLKKFLRKIPGGVFGREGEQQLFTVIQLDSMEQQRDQIHKLITSLPIYTQRLLVLLFGTFRVVAVNSERARTGMSSEALGVSVAPSFFQSCVSDGKTAKMEDVLRFKVATRVMKFMIDNFGVSNLFGRENYEFYARITGRILKVEEDWIFSFRYPPNTLVSRQLSLEAEKTWLQYECERWGLKFNLESMSHQEESQSTPALIHVPESLDLTSSLGMIPENTLLESYTRLSVSLEEN-----------------------GLFHASSRSSSNASHQS--RHAAMTLDELRAV-NRYAESTKS--LSYLPQVHERQTARMRTRSEWFLT 400 The following BLAST results are available for this feature:
BLAST of rho gtpase-activating protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of rho gtpase-activating protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 4
BLAST of rho gtpase-activating protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold180_size281610:45478..50434+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold180_size281610-processed-gene-0.4 ID=snap_masked-scaffold180_size281610-processed-gene-0.4|Name=rho gtpase-activating protein|organism=Tigriopus kingsejongensis|type=gene|length=4957bp|location=Sequence derived from alignment at scaffold180_size281610:45478..50434+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'rho gtpase-activating protein' has the following synonyms
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