nuclear hormone receptor, snap_masked-scaffold58_size443543-processed-gene-3.1 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000012486 (supercontig:LSalAtl2s:LSalAtl2s91:348479:353390:-1 gene:EMLSAG00000012486 transcript:EMLSAT00000012486 description:"maker-LSalAtl2s91-snap-gene-4.8") HSP 1 Score: 141.354 bits (355), Expect = 3.318e-41 Identity = 60/63 (95.24%), Postives = 60/63 (95.24%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMR 73 GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMR Sbjct: 224 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMR 286
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000009941 (supercontig:LSalAtl2s:LSalAtl2s649:484085:485655:-1 gene:EMLSAG00000009941 transcript:EMLSAT00000009941 description:"maker-LSalAtl2s649-snap-gene-4.11") HSP 1 Score: 100.138 bits (248), Expect = 2.960e-27 Identity = 38/59 (64.41%), Postives = 49/59 (83.05%), Query Frame = 0 Query: 17 RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 +HYG +CEGCK FFKRS+R+ L YQCRG+K+C V +HHRN+CQ+CRL+KC MGMR + Sbjct: 93 KHYGQFTCEGCKSFFKRSVRRNLTYQCRGSKNCPVDQHHRNQCQHCRLKKCFKMGMRRE 151
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000009940 (supercontig:LSalAtl2s:LSalAtl2s649:353131:422335:-1 gene:EMLSAG00000009940 transcript:EMLSAT00000009940 description:"maker-LSalAtl2s649-augustus-gene-4.7") HSP 1 Score: 100.138 bits (248), Expect = 8.013e-27 Identity = 38/65 (58.46%), Postives = 52/65 (80.00%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GD+ +HYG +CEGCK FFKRS+R+ L YQCRG++ C + +HHRN+CQ+CRL+KC+ MGMR + Sbjct: 438 GDKSSGKHYGQFTCEGCKSFFKRSVRRALTYQCRGSRSCPIDQHHRNQCQHCRLKKCIKMGMRKE 502
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000001919 (supercontig:LSalAtl2s:LSalAtl2s132:616435:622808:1 gene:EMLSAG00000001919 transcript:EMLSAT00000001919 description:"augustus_masked-LSalAtl2s132-processed-gene-6.5") HSP 1 Score: 96.2857 bits (238), Expect = 1.525e-25 Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GDR +HYG SCEGCKGFFKR++RK+L Y CR N+DC + K RNRCQYCR KCL GM+ + Sbjct: 95 GDRASGKHYGVYSCEGCKGFFKRTVRKELTYACRENRDCVIDKRQRNRCQYCRYMKCLDTGMKRE 159
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000009969 (supercontig:LSalAtl2s:LSalAtl2s651:302705:304416:-1 gene:EMLSAG00000009969 transcript:EMLSAT00000009969 description:"maker-LSalAtl2s651-augustus-gene-2.5") HSP 1 Score: 93.5893 bits (231), Expect = 1.360e-24 Identity = 36/71 (50.70%), Postives = 49/71 (69.01%), Query Frame = 0 Query: 5 ILSCLSLTRGDRRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 IL + + +HYG +CEGCK FFKR +R+ L +QCR K C V +HHRN+CQ+CR +KCL MGM+ + Sbjct: 73 ILCVVCGDKSSGKHYGQFTCEGCKSFFKRCVRRSLTFQCRSKKSCPVDQHHRNQCQHCRFKKCLNMGMKKE 143
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000000733 (supercontig:LSalAtl2s:LSalAtl2s1117:84476:96586:1 gene:EMLSAG00000000733 transcript:EMLSAT00000000733 description:"maker-LSalAtl2s1117-snap-gene-1.23") HSP 1 Score: 88.9669 bits (219), Expect = 8.636e-23 Identity = 36/58 (62.07%), Postives = 44/58 (75.86%), Query Frame = 0 Query: 18 HYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 HYG I+CEGCKGFF+RS + YQC K+C V + +RNRCQ+CRLQKCLA+GM D Sbjct: 58 HYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRD 115
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000005090 (supercontig:LSalAtl2s:LSalAtl2s269:306853:308464:-1 gene:EMLSAG00000005090 transcript:EMLSAT00000005090 description:"augustus_masked-LSalAtl2s269-processed-gene-3.0") HSP 1 Score: 88.1965 bits (217), Expect = 1.253e-22 Identity = 39/71 (54.93%), Postives = 49/71 (69.01%), Query Frame = 0 Query: 9 LSLTRGDRR---HYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSDC 76 L L GDR HY A++CEGCKGFF+RSI K Y C+ N DCE+ + R +CQ CRL+KC A GMR++C Sbjct: 172 LCLVCGDRASGYHYNALACEGCKGFFRRSITKNSNYTCKWNGDCEIDMYMRRKCQACRLKKCYATGMRAEC 242
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000013004 (supercontig:LSalAtl2s:LSalAtl2s98:942409:953748:1 gene:EMLSAG00000013004 transcript:EMLSAT00000013004 description:"augustus_masked-LSalAtl2s98-processed-gene-9.1") HSP 1 Score: 88.1965 bits (217), Expect = 1.397e-22 Identity = 34/56 (60.71%), Postives = 43/56 (76.79%), Query Frame = 0 Query: 17 RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGM 72 +HYG +CEGCKGFFKR+++K Y C +K+C V K RNRCQ+CR QKCLA+GM Sbjct: 419 QHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGM 474
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000007361 (supercontig:LSalAtl2s:LSalAtl2s418:374353:376789:1 gene:EMLSAG00000007361 transcript:EMLSAT00000007361 description:"maker-LSalAtl2s418-augustus-gene-3.13") HSP 1 Score: 87.4261 bits (215), Expect = 2.489e-22 Identity = 36/63 (57.14%), Postives = 46/63 (73.02%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMR 73 GDR +HYGA SC+GCKGFF+RS+RK+ Y CR N+ C V K RN C+YCRL+ C+ GM+ Sbjct: 155 GDRATGKHYGAASCDGCKGFFRRSVRKERVYGCRQNRACIVNKDKRNNCRYCRLKMCIKAGMK 217
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000008543 (supercontig:LSalAtl2s:LSalAtl2s527:163002:172818:1 gene:EMLSAG00000008543 transcript:EMLSAT00000008543 description:"maker-LSalAtl2s527-augustus-gene-1.53") HSP 1 Score: 87.4261 bits (215), Expect = 2.662e-22 Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = 0 Query: 13 RGDRRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGM 72 R HYG I+CEGCKGFFKR+++ + Y C + +CE+ K RNRCQYCR QKCL GM Sbjct: 289 RATGLHYGIITCEGCKGFFKRTVQNKRIYTCVADGECEINKAQRNRCQYCRFQKCLQKGM 348
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|73620966|sp|Q24142.2|HR78_DROME (RecName: Full=Nuclear hormone receptor HR78; Short=dHR78; AltName: Full=Nuclear receptor XR78E/F; AltName: Full=Nuclear receptor subfamily 2 group D member 1) HSP 1 Score: 132.88 bits (333), Expect = 5.719e-37 Identity = 59/70 (84.29%), Postives = 61/70 (87.14%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L L GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRG +CEVTKHHRNRCQ+CRLQKCLA GMRSD Sbjct: 51 LCLVCGDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGAMNCEVTKHHRNRCQFCRLQKCLASGMRSD 120
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|68566021|sp|Q26622.1|SHR2_STRPU (RecName: Full=Orphan steroid hormone receptor 2; AltName: Full=SpSHR2) HSP 1 Score: 127.102 bits (318), Expect = 6.446e-35 Identity = 53/65 (81.54%), Postives = 58/65 (89.23%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GD+ RHYGAISCEGCKGFFKRSIRK LGY CRGNKDC++ KH+RNRCQYCRLQKCL MGM+SD Sbjct: 91 GDKASGRHYGAISCEGCKGFFKRSIRKHLGYTCRGNKDCQIIKHNRNRCQYCRLQKCLDMGMKSD 155
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|57015416|sp|Q9N4B8.4|NHR41_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-41) HSP 1 Score: 121.709 bits (304), Expect = 6.539e-33 Identity = 51/70 (72.86%), Postives = 59/70 (84.29%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GD+ RHYGA+SCEGCKGFFKRSIRK++GY CR KDC VTK HRNRCQYCRL+KCL+MGMRS+ Sbjct: 151 LCVVCGDKASGRHYGAVSCEGCKGFFKRSIRKRIGYVCRSQKDCPVTKFHRNRCQYCRLRKCLSMGMRSE 220
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|341942228|sp|Q505F1.3|NR2C1_MOUSE (RecName: Full=Nuclear receptor subfamily 2 group C member 1; AltName: Full=Orphan nuclear receptor TR2; AltName: Full=Testicular receptor 2; Short=mTR2) HSP 1 Score: 117.472 bits (293), Expect = 1.921e-31 Identity = 49/70 (70.00%), Postives = 57/70 (81.43%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GD+ RHYGAI+CEGCKGFFKRSIRK L Y CRG+KDC + KHHRNRCQYCRLQ+C+A GM+ D Sbjct: 100 LCVVCGDKASGRHYGAITCEGCKGFFKRSIRKNLVYSCRGSKDCVINKHHRNRCQYCRLQRCIAFGMKQD 169
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|75066579|sp|Q95K90.1|NR2C1_MACFA (RecName: Full=Nuclear receptor subfamily 2 group C member 1) HSP 1 Score: 116.701 bits (291), Expect = 3.103e-31 Identity = 48/70 (68.57%), Postives = 57/70 (81.43%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GD+ RHYGA++CEGCKGFFKRSIRK L Y CRG+KDC + KHHRNRCQYCRLQ+C+A GM+ D Sbjct: 112 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQD 181
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|81902145|sp|Q8VIJ4.1|NR2C1_RAT (RecName: Full=Nuclear receptor subfamily 2 group C member 1; AltName: Full=Orphan nuclear receptor TR2; AltName: Full=Testicular receptor 2) HSP 1 Score: 116.701 bits (291), Expect = 3.286e-31 Identity = 49/70 (70.00%), Postives = 57/70 (81.43%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GD+ RHYGAI+CEGCKGFFKRSIRK L Y CRG+KDC + KHHRNRCQYCRLQ+C+A GM+ D Sbjct: 100 LCVVCGDKASGRHYGAITCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQD 169
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|226693548|sp|P13056.2|NR2C1_HUMAN (RecName: Full=Nuclear receptor subfamily 2 group C member 1; AltName: Full=Orphan nuclear receptor TR2; AltName: Full=Testicular receptor 2) HSP 1 Score: 116.701 bits (291), Expect = 3.392e-31 Identity = 48/70 (68.57%), Postives = 57/70 (81.43%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GD+ RHYGA++CEGCKGFFKRSIRK L Y CRG+KDC + KHHRNRCQYCRLQ+C+A GM+ D Sbjct: 112 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQD 181
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|75061946|sp|Q5RCZ5.1|NR2C1_PONAB (RecName: Full=Nuclear receptor subfamily 2 group C member 1) HSP 1 Score: 116.316 bits (290), Expect = 4.193e-31 Identity = 48/70 (68.57%), Postives = 57/70 (81.43%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GD+ RHYGA++CEGCKGFFKRSIRK L Y CRG+KDC + KHHRNRCQYCRLQ+C+A GM+ D Sbjct: 113 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQD 182
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|123892381|sp|Q28CK1.1|NR2C1_XENTR (RecName: Full=Nuclear receptor subfamily 2 group C member 1; AltName: Full=Developmental orphan receptor 2; Short=DOR2; AltName: Full=Orphan nuclear receptor TR2; AltName: Full=Testicular receptor 2) HSP 1 Score: 115.931 bits (289), Expect = 7.556e-31 Identity = 47/70 (67.14%), Postives = 58/70 (82.86%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GD+ RHYGA++CEGCKGFFKRSIRK L Y CRG+KDC + KH+RNRCQYCRLQ+C+A+GM+ D Sbjct: 151 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYTCRGSKDCVINKHYRNRCQYCRLQRCIALGMKQD 220
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|82201033|sp|Q6GN21.1|N2C1A_XENLA (RecName: Full=Nuclear receptor subfamily 2 group C member 1-A; AltName: Full=Developmental orphan receptor 2-A; Short=DOR2-A; Short=xDOR2-A; AltName: Full=Orphan nuclear receptor TR2-A; AltName: Full=Testicular receptor 2-A) HSP 1 Score: 115.546 bits (288), Expect = 8.949e-31 Identity = 46/70 (65.71%), Postives = 58/70 (82.86%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GD+ RHYGA++CEGCKGFFKRSIRK L Y CRG+KDC + KH+RNRCQYCRLQ+C+++GM+ D Sbjct: 151 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYTCRGSKDCVINKHYRNRCQYCRLQRCMSLGMKQD 220
BLAST of nuclear hormone receptor vs. nr
Match: gi|1339062313|ref|XP_023719796.1| (nuclear receptor subfamily 2 group C member 2 [Cryptotermes secundus] >gi|1330887827|gb|PNF21106.1| hypothetical protein B7P43_G05079 [Cryptotermes secundus]) HSP 1 Score: 136.732 bits (343), Expect = 2.962e-36 Identity = 62/70 (88.57%), Postives = 63/70 (90.00%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRGNK CEVTKHHRNRCQYCRLQKCLAMGMRSD Sbjct: 28 LCVVCGDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKKCEVTKHHRNRCQYCRLQKCLAMGMRSD 97
BLAST of nuclear hormone receptor vs. nr
Match: gi|1069708268|ref|XP_018312022.1| (PREDICTED: orphan steroid hormone receptor 2-like isoform X4 [Trachymyrmex zeteki] >gi|1069708271|ref|XP_018312023.1| PREDICTED: orphan steroid hormone receptor 2-like isoform X4 [Trachymyrmex zeteki]) HSP 1 Score: 135.961 bits (341), Expect = 4.469e-36 Identity = 60/65 (92.31%), Postives = 61/65 (93.85%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRG+K CEVTKHHRNRCQYCRLQKCLAMGMRSD Sbjct: 106 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGSKSCEVTKHHRNRCQYCRLQKCLAMGMRSD 170
BLAST of nuclear hormone receptor vs. nr
Match: gi|1068400225|ref|XP_018048039.1| (PREDICTED: orphan steroid hormone receptor 2-like isoform X6 [Atta colombica] >gi|1068400229|ref|XP_018048040.1| PREDICTED: orphan steroid hormone receptor 2-like isoform X6 [Atta colombica]) HSP 1 Score: 135.961 bits (341), Expect = 5.626e-36 Identity = 60/65 (92.31%), Postives = 61/65 (93.85%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRG+K CEVTKHHRNRCQYCRLQKCLAMGMRSD Sbjct: 108 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGSKSCEVTKHHRNRCQYCRLQKCLAMGMRSD 172
BLAST of nuclear hormone receptor vs. nr
Match: gi|1070607020|ref|XP_018401164.1| (PREDICTED: nuclear receptor subfamily 2 group C member 2-like isoform X2 [Cyphomyrmex costatus] >gi|1070607022|ref|XP_018401166.1| PREDICTED: nuclear receptor subfamily 2 group C member 2-like isoform X2 [Cyphomyrmex costatus]) HSP 1 Score: 135.961 bits (341), Expect = 5.743e-36 Identity = 60/65 (92.31%), Postives = 61/65 (93.85%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRG+K CEVTKHHRNRCQYCRLQKCLAMGMRSD Sbjct: 108 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGSKSCEVTKHHRNRCQYCRLQKCLAMGMRSD 172
BLAST of nuclear hormone receptor vs. nr
Match: gi|1067107221|ref|XP_018013896.1| (PREDICTED: nuclear receptor subfamily 2 group C member 2-like isoform X1 [Hyalella azteca]) HSP 1 Score: 137.887 bits (346), Expect = 5.863e-36 Identity = 60/72 (83.33%), Postives = 61/72 (84.72%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSDCK 77 L + GDR RHYGAISCEGCKGFFKRSIRKQLGY CR K CEVTKHHRNRCQYCRLQKCL MGMRSDCK Sbjct: 329 LCVVCGDRASGRHYGAISCEGCKGFFKRSIRKQLGYTCRNAKACEVTKHHRNRCQYCRLQKCLKMGMRSDCK 400
BLAST of nuclear hormone receptor vs. nr
Match: gi|749747363|ref|XP_011135802.1| (PREDICTED: orphan steroid hormone receptor 2 isoform X7 [Harpegnathos saltator]) HSP 1 Score: 135.961 bits (341), Expect = 6.923e-36 Identity = 60/65 (92.31%), Postives = 62/65 (95.38%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRG+K+CEVTKHHRNRCQYCRLQKCLAMGMRSD Sbjct: 145 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGSKNCEVTKHHRNRCQYCRLQKCLAMGMRSD 209
BLAST of nuclear hormone receptor vs. nr
Match: gi|1153703339|ref|XP_020284947.1| (orphan steroid hormone receptor 2 isoform X5 [Pseudomyrmex gracilis]) HSP 1 Score: 136.346 bits (342), Expect = 7.334e-36 Identity = 60/65 (92.31%), Postives = 62/65 (95.38%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRG+K+CEVTKHHRNRCQYCRLQKCLAMGMRSD Sbjct: 171 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGSKNCEVTKHHRNRCQYCRLQKCLAMGMRSD 235
BLAST of nuclear hormone receptor vs. nr
Match: gi|1227984908|ref|XP_021924110.1| (LOW QUALITY PROTEIN: orphan steroid hormone receptor 2 [Zootermopsis nevadensis]) HSP 1 Score: 135.576 bits (340), Expect = 7.343e-36 Identity = 62/70 (88.57%), Postives = 63/70 (90.00%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRGNK CEVTKHHRNRCQYCRLQKCLAMGMRSD Sbjct: 28 LCVVCGDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKSCEVTKHHRNRCQYCRLQKCLAMGMRSD 97
BLAST of nuclear hormone receptor vs. nr
Match: gi|1068400205|ref|XP_018048033.1| (PREDICTED: orphan steroid hormone receptor 2-like isoform X2 [Atta colombica]) HSP 1 Score: 136.346 bits (342), Expect = 8.808e-36 Identity = 60/65 (92.31%), Postives = 61/65 (93.85%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRG+K CEVTKHHRNRCQYCRLQKCLAMGMRSD Sbjct: 190 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGSKSCEVTKHHRNRCQYCRLQKCLAMGMRSD 254
BLAST of nuclear hormone receptor vs. nr
Match: gi|749747365|ref|XP_011135803.1| (PREDICTED: orphan steroid hormone receptor 2 isoform X8 [Harpegnathos saltator] >gi|749747367|ref|XP_011135804.1| PREDICTED: orphan steroid hormone receptor 2 isoform X8 [Harpegnathos saltator] >gi|749747371|ref|XP_011135806.1| PREDICTED: orphan steroid hormone receptor 2 isoform X8 [Harpegnathos saltator]) HSP 1 Score: 135.191 bits (339), Expect = 9.937e-36 Identity = 60/65 (92.31%), Postives = 62/65 (95.38%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRG+K+CEVTKHHRNRCQYCRLQKCLAMGMRSD Sbjct: 125 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGSKNCEVTKHHRNRCQYCRLQKCLAMGMRSD 189 The following BLAST results are available for this feature:
BLAST of nuclear hormone receptor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of nuclear hormone receptor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of nuclear hormone receptor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold58_size443543:330609..331203+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold58_size443543-processed-gene-3.1 ID=snap_masked-scaffold58_size443543-processed-gene-3.1|Name=nuclear hormone receptor|organism=Tigriopus kingsejongensis|type=gene|length=595bp|location=Sequence derived from alignment at scaffold58_size443543:330609..331203+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'nuclear hormone receptor' has the following synonyms
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