nuclear hormone receptor, snap_masked-scaffold58_size443543-processed-gene-3.1 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000012486 (supercontig:LSalAtl2s:LSalAtl2s91:348479:353390:-1 gene:EMLSAG00000012486 transcript:EMLSAT00000012486 description:"maker-LSalAtl2s91-snap-gene-4.8") HSP 1 Score: 141.354 bits (355), Expect = 3.318e-41 Identity = 60/63 (95.24%), Postives = 60/63 (95.24%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMR 73 GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMR Sbjct: 224 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMR 286
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000009941 (supercontig:LSalAtl2s:LSalAtl2s649:484085:485655:-1 gene:EMLSAG00000009941 transcript:EMLSAT00000009941 description:"maker-LSalAtl2s649-snap-gene-4.11") HSP 1 Score: 100.138 bits (248), Expect = 2.960e-27 Identity = 38/59 (64.41%), Postives = 49/59 (83.05%), Query Frame = 0 Query: 17 RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 +HYG +CEGCK FFKRS+R+ L YQCRG+K+C V +HHRN+CQ+CRL+KC MGMR + Sbjct: 93 KHYGQFTCEGCKSFFKRSVRRNLTYQCRGSKNCPVDQHHRNQCQHCRLKKCFKMGMRRE 151
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000009940 (supercontig:LSalAtl2s:LSalAtl2s649:353131:422335:-1 gene:EMLSAG00000009940 transcript:EMLSAT00000009940 description:"maker-LSalAtl2s649-augustus-gene-4.7") HSP 1 Score: 100.138 bits (248), Expect = 8.013e-27 Identity = 38/65 (58.46%), Postives = 52/65 (80.00%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GD+ +HYG +CEGCK FFKRS+R+ L YQCRG++ C + +HHRN+CQ+CRL+KC+ MGMR + Sbjct: 438 GDKSSGKHYGQFTCEGCKSFFKRSVRRALTYQCRGSRSCPIDQHHRNQCQHCRLKKCIKMGMRKE 502
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000001919 (supercontig:LSalAtl2s:LSalAtl2s132:616435:622808:1 gene:EMLSAG00000001919 transcript:EMLSAT00000001919 description:"augustus_masked-LSalAtl2s132-processed-gene-6.5") HSP 1 Score: 96.2857 bits (238), Expect = 1.525e-25 Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GDR +HYG SCEGCKGFFKR++RK+L Y CR N+DC + K RNRCQYCR KCL GM+ + Sbjct: 95 GDRASGKHYGVYSCEGCKGFFKRTVRKELTYACRENRDCVIDKRQRNRCQYCRYMKCLDTGMKRE 159
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000009969 (supercontig:LSalAtl2s:LSalAtl2s651:302705:304416:-1 gene:EMLSAG00000009969 transcript:EMLSAT00000009969 description:"maker-LSalAtl2s651-augustus-gene-2.5") HSP 1 Score: 93.5893 bits (231), Expect = 1.360e-24 Identity = 36/71 (50.70%), Postives = 49/71 (69.01%), Query Frame = 0 Query: 5 ILSCLSLTRGDRRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 IL + + +HYG +CEGCK FFKR +R+ L +QCR K C V +HHRN+CQ+CR +KCL MGM+ + Sbjct: 73 ILCVVCGDKSSGKHYGQFTCEGCKSFFKRCVRRSLTFQCRSKKSCPVDQHHRNQCQHCRFKKCLNMGMKKE 143
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000000733 (supercontig:LSalAtl2s:LSalAtl2s1117:84476:96586:1 gene:EMLSAG00000000733 transcript:EMLSAT00000000733 description:"maker-LSalAtl2s1117-snap-gene-1.23") HSP 1 Score: 88.9669 bits (219), Expect = 8.636e-23 Identity = 36/58 (62.07%), Postives = 44/58 (75.86%), Query Frame = 0 Query: 18 HYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 HYG I+CEGCKGFF+RS + YQC K+C V + +RNRCQ+CRLQKCLA+GM D Sbjct: 58 HYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRD 115
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000005090 (supercontig:LSalAtl2s:LSalAtl2s269:306853:308464:-1 gene:EMLSAG00000005090 transcript:EMLSAT00000005090 description:"augustus_masked-LSalAtl2s269-processed-gene-3.0") HSP 1 Score: 88.1965 bits (217), Expect = 1.253e-22 Identity = 39/71 (54.93%), Postives = 49/71 (69.01%), Query Frame = 0 Query: 9 LSLTRGDRR---HYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSDC 76 L L GDR HY A++CEGCKGFF+RSI K Y C+ N DCE+ + R +CQ CRL+KC A GMR++C Sbjct: 172 LCLVCGDRASGYHYNALACEGCKGFFRRSITKNSNYTCKWNGDCEIDMYMRRKCQACRLKKCYATGMRAEC 242
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000013004 (supercontig:LSalAtl2s:LSalAtl2s98:942409:953748:1 gene:EMLSAG00000013004 transcript:EMLSAT00000013004 description:"augustus_masked-LSalAtl2s98-processed-gene-9.1") HSP 1 Score: 88.1965 bits (217), Expect = 1.397e-22 Identity = 34/56 (60.71%), Postives = 43/56 (76.79%), Query Frame = 0 Query: 17 RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGM 72 +HYG +CEGCKGFFKR+++K Y C +K+C V K RNRCQ+CR QKCLA+GM Sbjct: 419 QHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGM 474
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000007361 (supercontig:LSalAtl2s:LSalAtl2s418:374353:376789:1 gene:EMLSAG00000007361 transcript:EMLSAT00000007361 description:"maker-LSalAtl2s418-augustus-gene-3.13") HSP 1 Score: 87.4261 bits (215), Expect = 2.489e-22 Identity = 36/63 (57.14%), Postives = 46/63 (73.02%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMR 73 GDR +HYGA SC+GCKGFF+RS+RK+ Y CR N+ C V K RN C+YCRL+ C+ GM+ Sbjct: 155 GDRATGKHYGAASCDGCKGFFRRSVRKERVYGCRQNRACIVNKDKRNNCRYCRLKMCIKAGMK 217
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000008543 (supercontig:LSalAtl2s:LSalAtl2s527:163002:172818:1 gene:EMLSAG00000008543 transcript:EMLSAT00000008543 description:"maker-LSalAtl2s527-augustus-gene-1.53") HSP 1 Score: 87.4261 bits (215), Expect = 2.662e-22 Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = 0 Query: 13 RGDRRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGM 72 R HYG I+CEGCKGFFKR+++ + Y C + +CE+ K RNRCQYCR QKCL GM Sbjct: 289 RATGLHYGIITCEGCKGFFKRTVQNKRIYTCVADGECEINKAQRNRCQYCRFQKCLQKGM 348
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|226733406|sp|A0JNE3.1|NR2C1_BOVIN (RecName: Full=Nuclear receptor subfamily 2 group C member 1) HSP 1 Score: 115.161 bits (287), Expect = 1.348e-30 Identity = 47/70 (67.14%), Postives = 56/70 (80.00%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GD+ RHYG ++CEGCKGFFKRSIRK L Y CRG+KDC + KHHRNRCQYCRLQ+C+A GM+ D Sbjct: 113 LCVVCGDKASGRHYGEVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQD 182
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|1351190|sp|P49116.1|NR2C2_HUMAN (RecName: Full=Nuclear receptor subfamily 2 group C member 2; AltName: Full=Orphan nuclear receptor TAK1; AltName: Full=Orphan nuclear receptor TR4; AltName: Full=Testicular receptor 4) HSP 1 Score: 114.775 bits (286), Expect = 1.755e-30 Identity = 45/65 (69.23%), Postives = 54/65 (83.08%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GD+ RHYGA+SCEGCKGFFKRS+RK L Y CR N+DC + KHHRNRCQ+CRL+KCL MGM+ + Sbjct: 121 GDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFCRLKKCLEMGMKME 185
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|82198455|sp|Q66J63.1|N2C1B_XENLA (RecName: Full=Nuclear receptor subfamily 2 group C member 1-B; AltName: Full=Developmental orphan receptor 2-B; Short=DOR2-B; Short=xDOR2-B; AltName: Full=Orphan nuclear receptor TR2-B; AltName: Full=Testicular receptor 2-B) HSP 1 Score: 114.39 bits (285), Expect = 2.393e-30 Identity = 46/70 (65.71%), Postives = 58/70 (82.86%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GD+ RHYGA++CEGCKGFFKRSIRK L Y CRG+KDC + KH+RNRCQYCRLQ+C+++GM+ D Sbjct: 151 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLIYTCRGSKDCVINKHYRNRCQYCRLQRCISLGMKQD 220
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|1351191|sp|P49117.1|NR2C2_MOUSE (RecName: Full=Nuclear receptor subfamily 2 group C member 2; AltName: Full=Orphan nuclear receptor TAK1; AltName: Full=Orphan nuclear receptor TR4; AltName: Full=Testicular receptor 4) HSP 1 Score: 112.464 bits (280), Expect = 1.001e-29 Identity = 44/65 (67.69%), Postives = 54/65 (83.08%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GD+ RHYGA+SCEGCKGFFKRS+RK L Y CR ++DC + KHHRNRCQ+CRL+KCL MGM+ + Sbjct: 121 GDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQDCIINKHHRNRCQFCRLKKCLEMGMKME 185
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|1730013|sp|P55094.1|NR2C2_RAT (RecName: Full=Nuclear receptor subfamily 2 group C member 2; AltName: Full=Orphan nuclear receptor TR4; AltName: Full=Testicular receptor 4) HSP 1 Score: 112.464 bits (280), Expect = 1.150e-29 Identity = 44/65 (67.69%), Postives = 54/65 (83.08%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GD+ RHYGA+SCEGCKGFFKRS+RK L Y CR ++DC + KHHRNRCQ+CRL+KCL MGM+ + Sbjct: 121 GDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQDCIINKHHRNRCQFCRLKKCLEMGMKME 185
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|147732610|sp|A2T929.2|RXRAA_DANRE (RecName: Full=Retinoic acid receptor RXR-alpha-A; AltName: Full=Nuclear receptor subfamily 2 group B member 1-A; AltName: Full=RXRalpha-B; AltName: Full=Retinoid X receptor alpha-A) HSP 1 Score: 106.686 bits (265), Expect = 6.492e-28 Identity = 48/76 (63.16%), Postives = 55/76 (72.37%), Query Frame = 0 Query: 9 LSLTR------GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 LSLT+ GDR +HYG SCEGCKGFFKR++RK L Y CR NKDC + K RNRCQYCR QKCLAMGM+ + Sbjct: 96 LSLTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCVIDKRQRNRCQYCRYQKCLAMGMKRE 171
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|133702|sp|P28700.1|RXRA_MOUSE (RecName: Full=Retinoic acid receptor RXR-alpha; AltName: Full=Nuclear receptor subfamily 2 group B member 1; AltName: Full=Retinoid X receptor alpha) HSP 1 Score: 106.686 bits (265), Expect = 6.498e-28 Identity = 44/65 (67.69%), Postives = 50/65 (76.92%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GDR +HYG SCEGCKGFFKR++RK L Y CR NKDC + K RNRCQYCR QKCLAMGM+ + Sbjct: 144 GDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE 208
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|464702|sp|Q05343.1|RXRA_RAT (RecName: Full=Retinoic acid receptor RXR-alpha; AltName: Full=Nuclear receptor subfamily 2 group B member 1; AltName: Full=Retinoid X receptor alpha) HSP 1 Score: 106.686 bits (265), Expect = 7.565e-28 Identity = 44/65 (67.69%), Postives = 50/65 (76.92%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GDR +HYG SCEGCKGFFKR++RK L Y CR NKDC + K RNRCQYCR QKCLAMGM+ + Sbjct: 144 GDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE 208
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|133701|sp|P19793.1|RXRA_HUMAN (RecName: Full=Retinoic acid receptor RXR-alpha; AltName: Full=Nuclear receptor subfamily 2 group B member 1; AltName: Full=Retinoid X receptor alpha) HSP 1 Score: 106.686 bits (265), Expect = 8.417e-28 Identity = 44/65 (67.69%), Postives = 50/65 (76.92%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GDR +HYG SCEGCKGFFKR++RK L Y CR NKDC + K RNRCQYCR QKCLAMGM+ + Sbjct: 139 GDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE 203
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|133700|sp|P28701.1|RXRG_CHICK (RecName: Full=Retinoic acid receptor RXR-gamma; AltName: Full=Nuclear receptor subfamily 2 group B member 3; AltName: Full=Retinoid X receptor gamma) HSP 1 Score: 105.916 bits (263), Expect = 1.389e-27 Identity = 45/65 (69.23%), Postives = 50/65 (76.92%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GDR +HYG SCEGCKGFFKR+IRK L Y CR NKDC + K RNRCQYCR QKCLAMGM+ + Sbjct: 147 GDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE 211
BLAST of nuclear hormone receptor vs. nr
Match: gi|657600370|gb|AID52846.1| (hormone receptor 78 [Tigriopus japonicus]) HSP 1 Score: 145.206 bits (365), Expect = 8.935e-39 Identity = 62/65 (95.38%), Postives = 62/65 (95.38%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD Sbjct: 231 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 295
BLAST of nuclear hormone receptor vs. nr
Match: gi|1238856880|ref|XP_022245333.1| (nuclear receptor subfamily 2 group C member 2-like isoform X3 [Limulus polyphemus]) HSP 1 Score: 141.354 bits (355), Expect = 1.402e-37 Identity = 60/76 (78.95%), Postives = 65/76 (85.53%), Query Frame = 0 Query: 2 PAWILSCLSLTRGDRRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSDCK 77 P + L + + RHYGAISCEGCKGFFKRSIRKQLGY CRGN+DCEVTKHHRNRCQYCRLQKCLAMGMR+DCK Sbjct: 140 PPFELCVVCGDKASGRHYGAISCEGCKGFFKRSIRKQLGYACRGNRDCEVTKHHRNRCQYCRLQKCLAMGMRADCK 215
BLAST of nuclear hormone receptor vs. nr
Match: gi|1238856870|ref|XP_022245327.1| (nuclear receptor subfamily 2 group C member 2-like isoform X1 [Limulus polyphemus] >gi|1238856872|ref|XP_022245329.1| nuclear receptor subfamily 2 group C member 2-like isoform X1 [Limulus polyphemus] >gi|1238856874|ref|XP_022245330.1| nuclear receptor subfamily 2 group C member 2-like isoform X1 [Limulus polyphemus] >gi|1238856876|ref|XP_022245331.1| nuclear receptor subfamily 2 group C member 2-like isoform X1 [Limulus polyphemus]) HSP 1 Score: 140.584 bits (353), Expect = 2.578e-37 Identity = 60/76 (78.95%), Postives = 65/76 (85.53%), Query Frame = 0 Query: 2 PAWILSCLSLTRGDRRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSDCK 77 P + L + + RHYGAISCEGCKGFFKRSIRKQLGY CRGN+DCEVTKHHRNRCQYCRLQKCLAMGMR+DCK Sbjct: 140 PPFELCVVCGDKASGRHYGAISCEGCKGFFKRSIRKQLGYACRGNRDCEVTKHHRNRCQYCRLQKCLAMGMRADCK 215
BLAST of nuclear hormone receptor vs. nr
Match: gi|668462065|gb|KFB49569.1| (hypothetical protein ZHAS_00017577 [Anopheles sinensis]) HSP 1 Score: 140.584 bits (353), Expect = 4.808e-37 Identity = 62/72 (86.11%), Postives = 64/72 (88.89%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSDCK 77 L L GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRG+ +CEVTKHHRNRCQYCRLQKCLA GMRSDCK Sbjct: 49 LCLVCGDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGSMNCEVTKHHRNRCQYCRLQKCLACGMRSDCK 120
BLAST of nuclear hormone receptor vs. nr
Match: gi|805816150|ref|XP_012148686.1| (PREDICTED: orphan steroid hormone receptor 2 isoform X1 [Megachile rotundata]) HSP 1 Score: 138.658 bits (348), Expect = 9.705e-37 Identity = 61/66 (92.42%), Postives = 62/66 (93.94%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSDC 76 GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRG+K CEVTKHHRNRCQYCRLQKCLAMGMRSDC Sbjct: 192 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGSKSCEVTKHHRNRCQYCRLQKCLAMGMRSDC 257
BLAST of nuclear hormone receptor vs. nr
Match: gi|646712422|gb|KDR17183.1| (Nuclear receptor subfamily 2 group C member 2, partial [Zootermopsis nevadensis]) HSP 1 Score: 137.117 bits (344), Expect = 1.370e-36 Identity = 58/59 (98.31%), Postives = 58/59 (98.31%), Query Frame = 0 Query: 17 RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 RHYGAISCEGCKGFFKRSIRKQLGYQCRGNK CEVTKHHRNRCQYCRLQKCLAMGMRSD Sbjct: 3 RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKSCEVTKHHRNRCQYCRLQKCLAMGMRSD 61
BLAST of nuclear hormone receptor vs. nr
Match: gi|805816166|ref|XP_012148692.1| (PREDICTED: orphan steroid hormone receptor 2 isoform X4 [Megachile rotundata]) HSP 1 Score: 137.887 bits (346), Expect = 1.454e-36 Identity = 61/66 (92.42%), Postives = 62/66 (93.94%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSDC 76 GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRG+K CEVTKHHRNRCQYCRLQKCLAMGMRSDC Sbjct: 133 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGSKSCEVTKHHRNRCQYCRLQKCLAMGMRSDC 198
BLAST of nuclear hormone receptor vs. nr
Match: gi|805816156|ref|XP_012148689.1| (PREDICTED: orphan steroid hormone receptor 2 isoform X3 [Megachile rotundata] >gi|805816160|ref|XP_012148690.1| PREDICTED: orphan steroid hormone receptor 2 isoform X3 [Megachile rotundata] >gi|805816163|ref|XP_012148691.1| PREDICTED: orphan steroid hormone receptor 2 isoform X3 [Megachile rotundata]) HSP 1 Score: 137.887 bits (346), Expect = 1.734e-36 Identity = 61/66 (92.42%), Postives = 62/66 (93.94%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSDC 76 GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRG+K CEVTKHHRNRCQYCRLQKCLAMGMRSDC Sbjct: 156 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGSKSCEVTKHHRNRCQYCRLQKCLAMGMRSDC 221
BLAST of nuclear hormone receptor vs. nr
Match: gi|1061483032|gb|ODN00279.1| (Nuclear receptor subfamily 2 group C member 2 [Orchesella cincta]) HSP 1 Score: 135.961 bits (341), Expect = 2.437e-36 Identity = 58/65 (89.23%), Postives = 60/65 (92.31%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GDR RHYGAISCEGCKGFFKRSIRK+LGY CRGNK+CEVTKHHRNRCQYCRLQKCL MGMRSD Sbjct: 39 GDRASGRHYGAISCEGCKGFFKRSIRKKLGYSCRGNKNCEVTKHHRNRCQYCRLQKCLQMGMRSD 103
BLAST of nuclear hormone receptor vs. nr
Match: gi|805816169|ref|XP_012148693.1| (PREDICTED: orphan steroid hormone receptor 2 isoform X5 [Megachile rotundata] >gi|805816172|ref|XP_012148694.1| PREDICTED: orphan steroid hormone receptor 2 isoform X5 [Megachile rotundata]) HSP 1 Score: 136.346 bits (342), Expect = 2.778e-36 Identity = 61/66 (92.42%), Postives = 62/66 (93.94%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSDC 76 GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRG+K CEVTKHHRNRCQYCRLQKCLAMGMRSDC Sbjct: 97 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGSKSCEVTKHHRNRCQYCRLQKCLAMGMRSDC 162 The following BLAST results are available for this feature:
BLAST of nuclear hormone receptor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of nuclear hormone receptor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of nuclear hormone receptor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold58_size443543:330609..331203+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold58_size443543-processed-gene-3.1 ID=snap_masked-scaffold58_size443543-processed-gene-3.1|Name=nuclear hormone receptor|organism=Tigriopus kingsejongensis|type=gene|length=595bp|location=Sequence derived from alignment at scaffold58_size443543:330609..331203+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'nuclear hormone receptor' has the following synonyms
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