nuclear hormone receptor, snap_masked-scaffold58_size443543-processed-gene-3.1 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000008902 (supercontig:LSalAtl2s:LSalAtl2s554:572309:581835:1 gene:EMLSAG00000008902 transcript:EMLSAT00000008902 description:"maker-LSalAtl2s554-snap-gene-5.6") HSP 1 Score: 76.6406 bits (187), Expect = 1.773e-18 Identity = 28/56 (50.00%), Postives = 39/56 (69.64%), Query Frame = 0 Query: 18 HYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMR 73 HYG ++CE CKGFFKR+++ + Y C ++ C + K R RC YCR QKCL +GM+ Sbjct: 197 HYGLLTCESCKGFFKRTVQNKKVYTCVADRSCVIDKTQRKRCPYCRFQKCLDVGMK 252
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000007894 (supercontig:LSalAtl2s:LSalAtl2s466:351370:353021:1 gene:EMLSAG00000007894 transcript:EMLSAT00000007894 description:"maker-LSalAtl2s466-augustus-gene-2.7") HSP 1 Score: 74.7146 bits (182), Expect = 6.707e-18 Identity = 30/61 (49.18%), Postives = 42/61 (68.85%), Query Frame = 0 Query: 17 RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKD--CEVTKHHRNRCQYCRLQKCLAMGMRSD 75 +HYG +C+GC GFFKRSIR+ Y C+ + C V K HRN+C+ CRL++C+ +GM D Sbjct: 44 KHYGIFACDGCAGFFKRSIRRNRLYVCKAKSEGSCLVDKTHRNQCRACRLKRCVDVGMNKD 104
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000007741 (supercontig:LSalAtl2s:LSalAtl2s450:172104:174744:-1 gene:EMLSAG00000007741 transcript:EMLSAT00000007741 description:"maker-LSalAtl2s450-snap-gene-2.9") HSP 1 Score: 72.4034 bits (176), Expect = 4.604e-17 Identity = 33/69 (47.83%), Postives = 42/69 (60.87%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKD----CEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GDR +HYG SC+GC GFFKRSI +Q Y C+ + C + K HRN+C+ CRL+KC M D Sbjct: 112 GDRSSGKHYGIYSCDGCSGFFKRSIHRQRIYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDCSMNKD 180
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000008071 (supercontig:LSalAtl2s:LSalAtl2s47:304551:317770:1 gene:EMLSAG00000008071 transcript:EMLSAT00000008071 description:"snap_masked-LSalAtl2s47-processed-gene-3.10") HSP 1 Score: 72.4034 bits (176), Expect = 5.046e-17 Identity = 29/55 (52.73%), Postives = 35/55 (63.64%), Query Frame = 0 Query: 18 HYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGM 72 HYG SCE CK FFKR+I+ + Y + +CE+ K R CQ CR QKCL MGM Sbjct: 282 HYGVSSCEACKAFFKRTIQGNIEYTXPASNECEINKRRRKACQACRFQKCLRMGM 336
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000008261 (supercontig:LSalAtl2s:LSalAtl2s49:858199:860758:1 gene:EMLSAG00000008261 transcript:EMLSAT00000008261 description:"maker-LSalAtl2s49-augustus-gene-8.3") HSP 1 Score: 69.707 bits (169), Expect = 3.884e-16 Identity = 29/65 (44.62%), Postives = 39/65 (60.00%), Query Frame = 0 Query: 10 SLTRGDRRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRS 74 S T D HYGAI+C C+ FF+R++ Y C +K C +TK R CQ+CR KCL GM++ Sbjct: 67 SDTANDHIHYGAIACXSCRAFFRRAVICNAEYHCSRDKTCFITKETRKHCQFCRFNKCLEAGMKN 131
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000012651 (supercontig:LSalAtl2s:LSalAtl2s959:3535:5114:-1 gene:EMLSAG00000012651 transcript:EMLSAT00000012651 description:"maker-LSalAtl2s959-snap-gene-0.24") HSP 1 Score: 66.2402 bits (160), Expect = 7.866e-15 Identity = 26/59 (44.07%), Postives = 36/59 (61.02%), Query Frame = 0 Query: 15 DRRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMR 73 D HYG I+C C+ FF+RS+ K Y C ++ C +T R CQ+CR +KCL GM+ Sbjct: 100 DHIHYGGIACFSCRAFFRRSVPKHTTYFCSTDQACMITITTRKNCQFCRYKKCLESGMK 158
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000005619 (supercontig:LSalAtl2s:LSalAtl2s301:354064:356113:1 gene:EMLSAG00000005619 transcript:EMLSAT00000005619 description:"maker-LSalAtl2s301-augustus-gene-3.7") HSP 1 Score: 65.4698 bits (158), Expect = 1.374e-14 Identity = 29/63 (46.03%), Postives = 40/63 (63.49%), Query Frame = 0 Query: 18 HYGAISCEGCKGFFKRSIRKQLGYQ-CRGNKDCEVTKHHRNRCQYCRLQKCLAMGM-RSDCKY 78 H+GA +CEGCK FF R+ Q Q C+ N C V K +R C+ CRL+KC+ +GM +S +Y Sbjct: 68 HFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCVVDKKNRTACKACRLRKCIMVGMSKSGSRY 130
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000004451 (supercontig:LSalAtl2s:LSalAtl2s231:945915:949068:1 gene:EMLSAG00000004451 transcript:EMLSAT00000004451 description:"snap_masked-LSalAtl2s231-processed-gene-9.18") HSP 1 Score: 65.0846 bits (157), Expect = 1.646e-14 Identity = 27/56 (48.21%), Postives = 34/56 (60.71%), Query Frame = 0 Query: 18 HYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMR 73 HYG SCE CKGFFKR+++ + Y C C VT R +C CR KCL +GM+ Sbjct: 166 HYGIFSCESCKGFFKRTVQNKKNYVCLRGSQCPVTISTRKKCPACRFDKCLNIGMK 221
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000003771 (supercontig:LSalAtl2s:LSalAtl2s2039:3647:12796:1 gene:EMLSAG00000003771 transcript:EMLSAT00000003771 description:"maker-LSalAtl2s2039-snap-gene-0.4") HSP 1 Score: 62.3882 bits (150), Expect = 1.566e-13 Identity = 25/49 (51.02%), Postives = 38/49 (77.55%), Query Frame = 0 Query: 28 KGFFKRSIRKQLGYQ-CRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 +GFF+RSI++++ Y+ C N+ C + + +RNRCQYCRL+KC+A GM D Sbjct: 17 QGFFRRSIQQKIQYRPCTKNQQCNIQRINRNRCQYCRLKKCIASGMSRD 65
BLAST of nuclear hormone receptor vs. L. salmonis genes
Match: EMLSAG00000004174 (supercontig:LSalAtl2s:LSalAtl2s220:369739:371271:-1 gene:EMLSAG00000004174 transcript:EMLSAT00000004174 description:"augustus_masked-LSalAtl2s220-processed-gene-3.5") HSP 1 Score: 62.3882 bits (150), Expect = 1.813e-13 Identity = 29/62 (46.77%), Postives = 39/62 (62.90%), Query Frame = 0 Query: 18 HYGAISCEGCKGFFKRSIRK--QLGYQC-RGNKD----CEVTKHHRNRCQYCRLQKCLAMGM 72 HYGAI+C C+ FF R++ K Q ++C RGN D C +TK R CQ+CR + CL+ GM Sbjct: 149 HYGAIACFSCRAFFGRTVHKGTQERFRCVRGNPDESGQCMITKATRTHCQFCRYRGCLSAGM 210
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|73620966|sp|Q24142.2|HR78_DROME (RecName: Full=Nuclear hormone receptor HR78; Short=dHR78; AltName: Full=Nuclear receptor XR78E/F; AltName: Full=Nuclear receptor subfamily 2 group D member 1) HSP 1 Score: 132.88 bits (333), Expect = 5.719e-37 Identity = 59/70 (84.29%), Postives = 61/70 (87.14%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L L GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRG +CEVTKHHRNRCQ+CRLQKCLA GMRSD Sbjct: 51 LCLVCGDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGAMNCEVTKHHRNRCQFCRLQKCLASGMRSD 120
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|68566021|sp|Q26622.1|SHR2_STRPU (RecName: Full=Orphan steroid hormone receptor 2; AltName: Full=SpSHR2) HSP 1 Score: 127.102 bits (318), Expect = 6.446e-35 Identity = 53/65 (81.54%), Postives = 58/65 (89.23%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GD+ RHYGAISCEGCKGFFKRSIRK LGY CRGNKDC++ KH+RNRCQYCRLQKCL MGM+SD Sbjct: 91 GDKASGRHYGAISCEGCKGFFKRSIRKHLGYTCRGNKDCQIIKHNRNRCQYCRLQKCLDMGMKSD 155
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|57015416|sp|Q9N4B8.4|NHR41_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-41) HSP 1 Score: 121.709 bits (304), Expect = 6.539e-33 Identity = 51/70 (72.86%), Postives = 59/70 (84.29%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GD+ RHYGA+SCEGCKGFFKRSIRK++GY CR KDC VTK HRNRCQYCRL+KCL+MGMRS+ Sbjct: 151 LCVVCGDKASGRHYGAVSCEGCKGFFKRSIRKRIGYVCRSQKDCPVTKFHRNRCQYCRLRKCLSMGMRSE 220
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|341942228|sp|Q505F1.3|NR2C1_MOUSE (RecName: Full=Nuclear receptor subfamily 2 group C member 1; AltName: Full=Orphan nuclear receptor TR2; AltName: Full=Testicular receptor 2; Short=mTR2) HSP 1 Score: 117.472 bits (293), Expect = 1.921e-31 Identity = 49/70 (70.00%), Postives = 57/70 (81.43%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GD+ RHYGAI+CEGCKGFFKRSIRK L Y CRG+KDC + KHHRNRCQYCRLQ+C+A GM+ D Sbjct: 100 LCVVCGDKASGRHYGAITCEGCKGFFKRSIRKNLVYSCRGSKDCVINKHHRNRCQYCRLQRCIAFGMKQD 169
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|75066579|sp|Q95K90.1|NR2C1_MACFA (RecName: Full=Nuclear receptor subfamily 2 group C member 1) HSP 1 Score: 116.701 bits (291), Expect = 3.103e-31 Identity = 48/70 (68.57%), Postives = 57/70 (81.43%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GD+ RHYGA++CEGCKGFFKRSIRK L Y CRG+KDC + KHHRNRCQYCRLQ+C+A GM+ D Sbjct: 112 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQD 181
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|81902145|sp|Q8VIJ4.1|NR2C1_RAT (RecName: Full=Nuclear receptor subfamily 2 group C member 1; AltName: Full=Orphan nuclear receptor TR2; AltName: Full=Testicular receptor 2) HSP 1 Score: 116.701 bits (291), Expect = 3.286e-31 Identity = 49/70 (70.00%), Postives = 57/70 (81.43%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GD+ RHYGAI+CEGCKGFFKRSIRK L Y CRG+KDC + KHHRNRCQYCRLQ+C+A GM+ D Sbjct: 100 LCVVCGDKASGRHYGAITCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQD 169
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|226693548|sp|P13056.2|NR2C1_HUMAN (RecName: Full=Nuclear receptor subfamily 2 group C member 1; AltName: Full=Orphan nuclear receptor TR2; AltName: Full=Testicular receptor 2) HSP 1 Score: 116.701 bits (291), Expect = 3.392e-31 Identity = 48/70 (68.57%), Postives = 57/70 (81.43%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GD+ RHYGA++CEGCKGFFKRSIRK L Y CRG+KDC + KHHRNRCQYCRLQ+C+A GM+ D Sbjct: 112 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQD 181
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|75061946|sp|Q5RCZ5.1|NR2C1_PONAB (RecName: Full=Nuclear receptor subfamily 2 group C member 1) HSP 1 Score: 116.316 bits (290), Expect = 4.193e-31 Identity = 48/70 (68.57%), Postives = 57/70 (81.43%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GD+ RHYGA++CEGCKGFFKRSIRK L Y CRG+KDC + KHHRNRCQYCRLQ+C+A GM+ D Sbjct: 113 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQD 182
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|123892381|sp|Q28CK1.1|NR2C1_XENTR (RecName: Full=Nuclear receptor subfamily 2 group C member 1; AltName: Full=Developmental orphan receptor 2; Short=DOR2; AltName: Full=Orphan nuclear receptor TR2; AltName: Full=Testicular receptor 2) HSP 1 Score: 115.931 bits (289), Expect = 7.556e-31 Identity = 47/70 (67.14%), Postives = 58/70 (82.86%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GD+ RHYGA++CEGCKGFFKRSIRK L Y CRG+KDC + KH+RNRCQYCRLQ+C+A+GM+ D Sbjct: 151 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYTCRGSKDCVINKHYRNRCQYCRLQRCIALGMKQD 220
BLAST of nuclear hormone receptor vs. SwissProt
Match: gi|82201033|sp|Q6GN21.1|N2C1A_XENLA (RecName: Full=Nuclear receptor subfamily 2 group C member 1-A; AltName: Full=Developmental orphan receptor 2-A; Short=DOR2-A; Short=xDOR2-A; AltName: Full=Orphan nuclear receptor TR2-A; AltName: Full=Testicular receptor 2-A) HSP 1 Score: 115.546 bits (288), Expect = 8.949e-31 Identity = 46/70 (65.71%), Postives = 58/70 (82.86%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 L + GD+ RHYGA++CEGCKGFFKRSIRK L Y CRG+KDC + KH+RNRCQYCRLQ+C+++GM+ D Sbjct: 151 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYTCRGSKDCVINKHYRNRCQYCRLQRCMSLGMKQD 220
BLAST of nuclear hormone receptor vs. nr
Match: gi|657600370|gb|AID52846.1| (hormone receptor 78 [Tigriopus japonicus]) HSP 1 Score: 145.206 bits (365), Expect = 8.935e-39 Identity = 62/65 (95.38%), Postives = 62/65 (95.38%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD Sbjct: 231 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 295
BLAST of nuclear hormone receptor vs. nr
Match: gi|1238856880|ref|XP_022245333.1| (nuclear receptor subfamily 2 group C member 2-like isoform X3 [Limulus polyphemus]) HSP 1 Score: 141.354 bits (355), Expect = 1.402e-37 Identity = 60/76 (78.95%), Postives = 65/76 (85.53%), Query Frame = 0 Query: 2 PAWILSCLSLTRGDRRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSDCK 77 P + L + + RHYGAISCEGCKGFFKRSIRKQLGY CRGN+DCEVTKHHRNRCQYCRLQKCLAMGMR+DCK Sbjct: 140 PPFELCVVCGDKASGRHYGAISCEGCKGFFKRSIRKQLGYACRGNRDCEVTKHHRNRCQYCRLQKCLAMGMRADCK 215
BLAST of nuclear hormone receptor vs. nr
Match: gi|1238856870|ref|XP_022245327.1| (nuclear receptor subfamily 2 group C member 2-like isoform X1 [Limulus polyphemus] >gi|1238856872|ref|XP_022245329.1| nuclear receptor subfamily 2 group C member 2-like isoform X1 [Limulus polyphemus] >gi|1238856874|ref|XP_022245330.1| nuclear receptor subfamily 2 group C member 2-like isoform X1 [Limulus polyphemus] >gi|1238856876|ref|XP_022245331.1| nuclear receptor subfamily 2 group C member 2-like isoform X1 [Limulus polyphemus]) HSP 1 Score: 140.584 bits (353), Expect = 2.578e-37 Identity = 60/76 (78.95%), Postives = 65/76 (85.53%), Query Frame = 0 Query: 2 PAWILSCLSLTRGDRRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSDCK 77 P + L + + RHYGAISCEGCKGFFKRSIRKQLGY CRGN+DCEVTKHHRNRCQYCRLQKCLAMGMR+DCK Sbjct: 140 PPFELCVVCGDKASGRHYGAISCEGCKGFFKRSIRKQLGYACRGNRDCEVTKHHRNRCQYCRLQKCLAMGMRADCK 215
BLAST of nuclear hormone receptor vs. nr
Match: gi|668462065|gb|KFB49569.1| (hypothetical protein ZHAS_00017577 [Anopheles sinensis]) HSP 1 Score: 140.584 bits (353), Expect = 4.808e-37 Identity = 62/72 (86.11%), Postives = 64/72 (88.89%), Query Frame = 0 Query: 9 LSLTRGDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSDCK 77 L L GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRG+ +CEVTKHHRNRCQYCRLQKCLA GMRSDCK Sbjct: 49 LCLVCGDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGSMNCEVTKHHRNRCQYCRLQKCLACGMRSDCK 120
BLAST of nuclear hormone receptor vs. nr
Match: gi|805816150|ref|XP_012148686.1| (PREDICTED: orphan steroid hormone receptor 2 isoform X1 [Megachile rotundata]) HSP 1 Score: 138.658 bits (348), Expect = 9.705e-37 Identity = 61/66 (92.42%), Postives = 62/66 (93.94%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSDC 76 GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRG+K CEVTKHHRNRCQYCRLQKCLAMGMRSDC Sbjct: 192 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGSKSCEVTKHHRNRCQYCRLQKCLAMGMRSDC 257
BLAST of nuclear hormone receptor vs. nr
Match: gi|646712422|gb|KDR17183.1| (Nuclear receptor subfamily 2 group C member 2, partial [Zootermopsis nevadensis]) HSP 1 Score: 137.117 bits (344), Expect = 1.370e-36 Identity = 58/59 (98.31%), Postives = 58/59 (98.31%), Query Frame = 0 Query: 17 RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 RHYGAISCEGCKGFFKRSIRKQLGYQCRGNK CEVTKHHRNRCQYCRLQKCLAMGMRSD Sbjct: 3 RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKSCEVTKHHRNRCQYCRLQKCLAMGMRSD 61
BLAST of nuclear hormone receptor vs. nr
Match: gi|805816166|ref|XP_012148692.1| (PREDICTED: orphan steroid hormone receptor 2 isoform X4 [Megachile rotundata]) HSP 1 Score: 137.887 bits (346), Expect = 1.454e-36 Identity = 61/66 (92.42%), Postives = 62/66 (93.94%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSDC 76 GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRG+K CEVTKHHRNRCQYCRLQKCLAMGMRSDC Sbjct: 133 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGSKSCEVTKHHRNRCQYCRLQKCLAMGMRSDC 198
BLAST of nuclear hormone receptor vs. nr
Match: gi|805816156|ref|XP_012148689.1| (PREDICTED: orphan steroid hormone receptor 2 isoform X3 [Megachile rotundata] >gi|805816160|ref|XP_012148690.1| PREDICTED: orphan steroid hormone receptor 2 isoform X3 [Megachile rotundata] >gi|805816163|ref|XP_012148691.1| PREDICTED: orphan steroid hormone receptor 2 isoform X3 [Megachile rotundata]) HSP 1 Score: 137.887 bits (346), Expect = 1.734e-36 Identity = 61/66 (92.42%), Postives = 62/66 (93.94%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSDC 76 GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRG+K CEVTKHHRNRCQYCRLQKCLAMGMRSDC Sbjct: 156 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGSKSCEVTKHHRNRCQYCRLQKCLAMGMRSDC 221
BLAST of nuclear hormone receptor vs. nr
Match: gi|1061483032|gb|ODN00279.1| (Nuclear receptor subfamily 2 group C member 2 [Orchesella cincta]) HSP 1 Score: 135.961 bits (341), Expect = 2.437e-36 Identity = 58/65 (89.23%), Postives = 60/65 (92.31%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSD 75 GDR RHYGAISCEGCKGFFKRSIRK+LGY CRGNK+CEVTKHHRNRCQYCRLQKCL MGMRSD Sbjct: 39 GDRASGRHYGAISCEGCKGFFKRSIRKKLGYSCRGNKNCEVTKHHRNRCQYCRLQKCLQMGMRSD 103
BLAST of nuclear hormone receptor vs. nr
Match: gi|805816169|ref|XP_012148693.1| (PREDICTED: orphan steroid hormone receptor 2 isoform X5 [Megachile rotundata] >gi|805816172|ref|XP_012148694.1| PREDICTED: orphan steroid hormone receptor 2 isoform X5 [Megachile rotundata]) HSP 1 Score: 136.346 bits (342), Expect = 2.778e-36 Identity = 61/66 (92.42%), Postives = 62/66 (93.94%), Query Frame = 0 Query: 14 GDR---RHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRSDC 76 GDR RHYGAISCEGCKGFFKRSIRKQLGYQCRG+K CEVTKHHRNRCQYCRLQKCLAMGMRSDC Sbjct: 97 GDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGSKSCEVTKHHRNRCQYCRLQKCLAMGMRSDC 162 The following BLAST results are available for this feature:
BLAST of nuclear hormone receptor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of nuclear hormone receptor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of nuclear hormone receptor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold58_size443543:330609..331203+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold58_size443543-processed-gene-3.1 ID=snap_masked-scaffold58_size443543-processed-gene-3.1|Name=nuclear hormone receptor|organism=Tigriopus kingsejongensis|type=gene|length=595bp|location=Sequence derived from alignment at scaffold58_size443543:330609..331203+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'nuclear hormone receptor' has the following synonyms
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