maker-scaffold188_size271682-snap-gene-1.28-mRNA-1, maker-scaffold188_size271682-snap-gene-1.28-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold188_size271682-snap-gene-1.28-mRNA-1
Unique Namemaker-scaffold188_size271682-snap-gene-1.28-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold188_size271682supercontigscaffold188_size271682:187993..190711 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
lissencephaly-1-like proteinmaker-scaffold188_size271682-snap-gene-1.28Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold188_size271682-snap-gene-1.28-mRNA-1:exon:1166maker-scaffold188_size271682-snap-gene-1.28-mRNA-1:exon:1166Tigriopus kingsejongensisexon
maker-scaffold188_size271682-snap-gene-1.28-mRNA-1:exon:1167maker-scaffold188_size271682-snap-gene-1.28-mRNA-1:exon:1167Tigriopus kingsejongensisexon
maker-scaffold188_size271682-snap-gene-1.28-mRNA-1:exon:1168maker-scaffold188_size271682-snap-gene-1.28-mRNA-1:exon:1168Tigriopus kingsejongensisexon
maker-scaffold188_size271682-snap-gene-1.28-mRNA-1:five_prime_utrmaker-scaffold188_size271682-snap-gene-1.28-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold188_size271682-snap-gene-1.28-mRNA-1:five_prime_utrmaker-scaffold188_size271682-snap-gene-1.28-mRNA-1:five_prime_utr-2007829Tigriopus kingsejongensisexon
maker-scaffold188_size271682-snap-gene-1.28-mRNA-1:cdsmaker-scaffold188_size271682-snap-gene-1.28-mRNA-1:cdsTigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2007831auto2007831Tigriopus kingsejongensispolypeptide
Tk00137Tk00137Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk00137

>Tk00137 ID=Tk00137|Name=Tk00137|organism=Tigriopus kingsejongensis|type=polypeptide|length=424bp
LPSGWAQWTWGSAMKMVLSQRQREELNKAIAEYMQSNGYTDALENFKRET
DMPGDIDKKFAGLLEKKWTSVIRLQKKVNELEAKLAEAEKEFISGAPTRE
KRTPGEWIPRPPEKYTLSGHRAPVTKVLFHPIFSLVISASEDSTVKVWDF
ETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKT
LQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWV
RMVRVYGDQYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPES
ATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVG
HDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCTSL
DFHRSGPFVVTGSVDQTVKIWECR
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mRNA from alignment at scaffold188_size271682:187993..190711+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold188_size271682-snap-gene-1.28-mRNA-1 ID=maker-scaffold188_size271682-snap-gene-1.28-mRNA-1|Name=maker-scaffold188_size271682-snap-gene-1.28-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2719bp|location=Sequence derived from alignment at scaffold188_size271682:187993..190711+ (Tigriopus kingsejongensis)
GGCGCAGTCGGCTGATGAATGGCCACGATGATGATCGAGTCGGGCTTGAA GTGGGTGACGGACGCACGCAGCAACTCGGGGCCAGACCACACACCAGACT CCGTTCCCAGGGCTAGTCGCTAGGTCGCCGCGGTCCGAGGATTGGGCCCA CACCTTGGGTGAGGCGGGTGGCCTTCGAGGCCCGAGTGTCCCACGGAGGC TCACAGCTCAGGCCTGGTCAGCTGGCCCGGCCAGAACGCCTGCCGGCCCA CGGGTAAGAGGACCACGCCCGACCGACTGGACGGGTCCGGGCCAGTGGCT GGCGGGCTGACAGTACGGCTCCGCCTTCAGATTTCAGCTCTTCAGCTCTG CCGAGCCATGCGTGCACCCGTCGAGCGGTCGCTGCGGAGGCCTTGAGACT CCGGATTGCCGAGTGGTTGGGCTCAGTGGACGTGGGGATCGGCCATGAAA ATGGTGCTCTCGCAGCGACAGCGCGAAGAGCTGAACAAGGCCATCGCCGA GTACATGCAGAGCAATGGCTACACGGACGCGTTGGAGAACTTCAAGCGCG AGACCGACATGCCCGGCGACATTGACAAGAAGTTTGCCGGACTCCTCGAA AAGAAATGGACGTCCGTGATTCGCTTACAGAAAAAGGTAGGGGGCGGCCT CCCGGCTGGCTCGGGGCTCCGTTTGGGGGCGGGCTGATTCGGGTCCCTGT TTTCCAGGTCAACGAGTTGGAGGCCAAGCTGGCCGAGGCCGAAAAGGAGT TCATATCGGGTGCGCCCACCCGGGAGAAGCGCACGCCGGGCGAGTGGATC CCGCGACCGCCCGAAAAGTACACCCTCTCCGGGCATCGGGCGCCCGTCAC CAAAGTACTCTTCCACCCCATCTTCAGCCTCGTGATATCCGCCTCGGAGG ACTCCACCGTCAAAGTGTGGGATTTTGAGACCGGCGACTTTGAACGGACG CTCAAAGGTCATACCGACTCGGTTCAGGACATTGCCTTCGATGGCCAGGG CAAACTGCTCGTCTCCTGCTCGGCCGACATGTCCATCAAGATCTGGGACT TTCAGTCCTACGACTGCATTAAGACCCTTCAGGGTCACGATCACAATGTG AGCAGTGTGTGCTTCGTGCCTTCCGGCGACCACATCATCTCCTGTAGTCG CGACAAGTCCATCAAGATGTGGGAGGTGGCCACGGGCTACTGCGTCAAGA CCTACAAGGGCCACCGAGAGTGGGTCCGCATGGTCCGGGTCTATGGCGAC CAATACATAGCCACGTGTTCCAACGACCAGACGGTGCGTGTCTGGGCGCT CCAAACCAAAGATTGCAAACTAGAACTGAGAGAGCACGATCATGTGGTGG AGTGCGTGGCCTGGGCTCCCGAGTCGGCCACGCCCGCCATCAACGAAGCG GCCAGCGAAGACAATAAAGCCGACGGCGGCAAGTTCATGGGCCCATTCTT GGCCTCGGGCTCGAGGGACAAGACCATCAAGATCTGGGATGTCACATCCG GCTCCTGTCTTTTCACCCTGGTGGGCCACGACAATTGGATCCGCGGACTG GTGTTCCACCCGGGGGGCAAGTACTTGCTCTCGGCCAGCGACGACAAGAC ACTTCGAATATGGGATCTGGCCCATAAACGCTGTCAGAAGCGACTGGATG CGCACACGCACTTCTGTACTTCGCTGGATTTCCACCGGTCCGGCCCTTTC GTGGTCACGGGCAGTGTGGATCAGACCGTGAAGATCTGGGAATGCCGATA AGATCACCAGGCTCTAAGACTTTTGTGGGTGGTTTTACTCCTCCAGCGCC ACGCCCTCCACACAGTAGCCTGGGTGGCCATCGAGGTCGTTACTCTTTCC GTCGCCGACTCGAAACGTGGATCTGAATGACTCCAGATATCCCCGGACAC CCCCCCCCCCAGCAAAATTTGCCCCTTTACCTCTACGTCCTTGATTCGCA TCATGAACTCAAATATATCAGAATTCAGAGCTCTTCCAAACTGAACTATT CCCACGGACGCAGTTTGGGTCATTTATTCGTTGATTTTGTTCGATCTGCC CGGACACAACAGTTCGGCGGTCCTCCCACTCTAAACTTCCACCAGTCACC CCGACCAATCAGTCTGTAATTCACGATGCTTTGCACTTCTACCCTTCGAA CTAGTCGTTCTCTGCCTGCCTGCCTTCCTTCAATGCCAATTCCTGTCTTC GTTTCCCCAAGGATTTCGCCACCCCCGATGCCTCCGCTCCCTCATCAATA TTTTTCAAGTCGTGATCGACATACATTGACCTTAGCAGAACAGCCCCTTC AGCCACACGCCCCCACCATTCCAATTATCCAGTCTGGTACACTTACTTCT CTATCTGCTTGGAAAGCAGTCATGAAAACAAAACCATTCGCGATGAGTTT GTCCAGCTACAGCAAACGCAATGAATGACCTTTCGCAGAGACATTTTCCA AGTATATGTTGAATTGATTGTAAATATGCTTTCCACGCCAAGTCCGAGGT GATCAGTCCCCCTCCCTCCCCTCAGCCAATTCGGAGCCAACGATACAAAT ACAACCAGCACCACAAGGACCATCCTACTAGTGACCCAGCCTTTATCATT CGGCTTGATTATTTTCACCCGTAACACCGTGCGGCGAGCAGGCCAATGAT GACATCGTGTATAATCTTGTTAGTTTAGAATTGTGAAATTATTAGTTTTA TTTCTCGCCGATATTAAAA
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