maker-scaffold192_size271026-snap-gene-1.22-mRNA-1, maker-scaffold192_size271026-snap-gene-1.22-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	maker-scaffold192_size271026-snap-gene-1.22-mRNA-1
Unique Name	maker-scaffold192_size271026-snap-gene-1.22-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold192_size271026	supercontig	scaffold192_size271026:116203..123255 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
retinoid x receptor	maker-scaffold192_size271026-snap-gene-1.22	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
maker-scaffold192_size271026-snap-gene-1.22-mRNA-1:exon:747	maker-scaffold192_size271026-snap-gene-1.22-mRNA-1:exon:747	Tigriopus kingsejongensis	exon
maker-scaffold192_size271026-snap-gene-1.22-mRNA-1:exon:748	maker-scaffold192_size271026-snap-gene-1.22-mRNA-1:exon:748	Tigriopus kingsejongensis	exon
maker-scaffold192_size271026-snap-gene-1.22-mRNA-1:exon:749	maker-scaffold192_size271026-snap-gene-1.22-mRNA-1:exon:749	Tigriopus kingsejongensis	exon
maker-scaffold192_size271026-snap-gene-1.22-mRNA-1:three_prime_utr	maker-scaffold192_size271026-snap-gene-1.22-mRNA-1:three_prime_utr	Tigriopus kingsejongensis	exon
maker-scaffold192_size271026-snap-gene-1.22-mRNA-1:cds	maker-scaffold192_size271026-snap-gene-1.22-mRNA-1:cds	Tigriopus kingsejongensis	exon
maker-scaffold192_size271026-snap-gene-1.22-mRNA-1:cds	maker-scaffold192_size271026-snap-gene-1.22-mRNA-1:cds-1996952	Tigriopus kingsejongensis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto1996953	auto1996953	Tigriopus kingsejongensis	polypeptide
Tk07205	Tk07205	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold192_size271026:116203..123255-

protein sequence of Tk07205

>Tk07205 ID=Tk07205|Name=Tk07205|organism=Tigriopus kingsejongensis|type=polypeptide|length=412bp
MAMDPAHSLMEGGVPPTPPLAGLAHPPQSPLELKPDVSLLLNAHSPALPR
PTSPAVHYPPLSGSKHFCSICGDRASGKHYGVYSCEGCKGFFKRTVRKEL
VYACRENKACIIDKRQRNRCQYCRYMKCLATGMRREAVQEERNRGGHKGA
EAAEPVESSTGAGGLGGEMAIDRIVAAEHISEQGGAFSRQESDDLQAHMP
GGFDGDQPNKRKMLQQLVEWAKHIPHFTDLKIEDRIKLIRAGWNELLIAG
CAFRSMNQEDGILWADSQFIKRENAHLAGVGDIFDRVLVELVGKMKEMKM
DKAELGCLRAIILFNPDAKGLEQDPALQVESFREKVYATLEEYCRTNHEN
EPSRFAKLLLRLPALRSIGLKCVEHLFFYKLIKDDGPNGNGADVNDVAAQ
SLELFIKEILEE

mRNA from alignment at scaffold192_size271026:116203..123255-

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold192_size271026-snap-gene-1.22-mRNA-1 ID=maker-scaffold192_size271026-snap-gene-1.22-mRNA-1|Name=maker-scaffold192_size271026-snap-gene-1.22-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=7053bp|location=Sequence derived from alignment at scaffold192_size271026:116203..123255- (Tigriopus kingsejongensis)
GCCCGGGCCAGCCTGTGGCCTCCAGCGCCATCGATGGAGTCATCCCGATT
TGGCTCTTTATCCGACGCCCGATTTGGCCAAACTGTCGAGCTCAGTCCGA
GATCCTCACCCATTGCCTACACACATCGCCTGTGGGTTGTGAGCCTAGAC
ACTAGGTTGTGAGTGCGCCCGTGAATTGGTAGTGCCCGTGTCCGGCTGGC
TGGCCCGCACCTCCCAGCTCCCCTCCGCCCGTGCGAGTCCCGGGTCATGA
GCCTGGCGTCTTGAGTCGCGCCCCATGGCCATGGATCCCGCCCACAGCCT
CATGGAGGGCGGTGTCCCGCCCACCCCGCCCCTGGCTGGCCTAGCCCACC
CGCCTCAGTCGCCGCTCGAGCTCAAGCCCGACGTGTCCCTGCTGCTCAAC
GCCCATTCACCCGCACTCCCGCGCCCCACCTCGCCCGCAGTCCACTATCC
GCCGCTGAGCGGGTCCAAGCACTTCTGCAGCATCTGCGGCGACCGCGCCT
CCGGCAAGCACTACGGCGTGTACTCGTGCGAGGGCTGCAAGGGCTTCTTC
AAGCGCACCGTCCGCAAAGAGCTGGTCTACGCCTGCCGCGAGAACAAGGC
TTGCATCATCGACAAGCGCCAGCGCAACCGCTGCCAGTATTGCCGCTACA
TGAAGTGCCTGGCCACGGGCATGCGGCGCGAGGCCGTGCAGGAGGAGCGC
AATCGCGGCGGGCACAAGGGGGCCGAGGCGGCTGAGCCGGTCGAGAGCTC
GACGGGGGCCGGTGGGCTGGGGGGCGAGATGGCTATCGACCGCATCGTGG
CCGCCGAGCACATCTCGGAGCAGGGCGGCGCCTTCAGCCGGCAGGAGAGC
GACGATCTCCAGGCTCACATGCCCGGTGGCTTCGACGGGGACCAGCCCAA
CAAGCGCAAGATGCTCCAGCAACTGGTCGAGTGGGCCAAGCACATTCCCC
ACTTCACCGACCTCAAGATCGAAGATCGGGTAAGGCTCCTACCATGGTCT
CGGAGACCCTTTTTGGATAGGGTAGGGGCTGGCGGTCGTGAGCCGAAGGG
GTTTCGGAGGCTAGCGCTGCGGCTAGGGTCACTCGAGCGTAATTGACTTC
GATGAGCGCTGAGGCTAGCTTAATTCGAGCGTAGTTGACCTAGATTGGCG
CTGCGGCTAGCTCAATTCGAGCGTAGTTGACCTAGATTGGCGCTGCGGCT
AGCTTAATTCGAGCGTAATTGACTTCGATGAGCGCTGCGGCTAGCTCAAT
TCGAGCGTAATTGACTTCGATGAGCGCTGCGGCTAGCTCAATTCGAGCGT
AGTTGACTTCGATGAGCGCTGCGGCTAGCTCAATTTGAGGGTAGTTGACC
TAGATTGGCGCTGCGGCTAGCTCAATTCGAGCGTAGTTGACCTAGATTGG
CGCTGCGGCTAGCTCAATTCGAGCGTAGTTGACTTCGATGAGCGCTGCGG
CTAGCTCAATTCGAGCGTAGTTGACCTAGATTGGCGCTGCGGCTAGCTTA
ATTCGAGCGTAATTGACTTCGATGAGCGCTGCGGCTAGCTCAATTCGAGC
GTAGTTGACCTAGATTGGCGCTGCGGCTAGCTCAATTCGAGCGTAGTTGA
CCTAGATTGGCGCTGCGGCTAGCTCAATTCGAGCGTAATTGACTTCGATG
AGCGCTGCGGCTAGCTCAATTCGAGCGTAGTTGACCTAGATTGGCGCTGC
GGCTAGCTCAATTCGAGCGTAGTTGACCTAGATTGGCGCTGCGGCTAGCT
TAATTCGAGCGTAGTTGACCTAGATTGGCGCTGCGGCTAGCTTAAATTGA
CATACTGTTAGGGTTTGGTTACGTCGGGTCAGGTTAGGTCAGGTTGGATG
TTAGAACTGTTTGGGCGCAGGACCGCCAGCCCCTACCTTTACCCCAATTT
TCCGTGGGCCACGGACTTGCCCGGCCCCATGGGCGTTGGACTGGCGCATA
GGGTCACATTGGCCCCCGTCAGCCTGGGCCCACGGTATTGAGACGTCCCA
AGCTGGAATTGAGATAGATGCGGGGGTCTGGTGGCTGGAAATAACCCGCT
CGCCAAGGATGAAAATGATTTTCCGGATGTCAGTTCATCCATAATCAGTC
TGTTTCGAGCCATTCGGCTACTGCTTAACCCACCTCCAGGTCTTCGCTGG
CGTAAATTATGAGAGTCAGCTGTTAGCCAACACATAAATGTGTTTCAGAA
AAACATCGGATACAGTTAGGCTGTACTACACTTACGTGCCACCTCTCGTC
TACTGAGACACACGACCACACCAACCCCTTGAGATCTTGACCATGGCGTG
GCATTACAGCCCAAGGTCCATTCGAAAATCCTAAGGTGCTTCAGCCTAGA
GCAGCGACCTGGGTCGTCACCAATGAAAAAGAGATTTTTTTCACTCGTCA
TGACCACATCTGTTGGTCAAAGCCTCCCAAGTTTCTCTGTACGAACTCGT
TGAGCATGAGCAACACCTAGCTCATCCAGACTTGGGCTCCTGAAGTGTGG
GGCTGCCCATGATGAGGGCAGACTTACGTCTGCATCCTCCCACCTCGATC
CAGTTACATTGTTTAGCCCTTTTGGGTTTCCACTCGGGTTAAGTGGCCAT
GAGGTGAGAAAGTGTTGGCTCGGATCTTTGGCATCGCTGCTTTCATGACG
TGCGCGAGCCTCTGAGGAATTTGGGAAACCCACGAAACGGTGACGTCATT
CCTGGGATGAAAGTAGTCATTGGATCTCCTGGTATACTCTTCCGACTAAT
TGAACCTTCGGCACTAGAGGCTATAATGTGTCTCCCTTTCCAGATTAAGC
TGATTCGGGCTGGCTGGAACGAACTCTTGATCGCTGGCTGTGCCTTCAGG
TCCATGAATCAAGAAGATGGCATCCTCTGGGCGGACTCTCAGTTCATCAA
GCGCGAAAACGCCCATCTGGCCGGAGTTGGCGACATCTTTGACCGAGTTC
TCGTCGAGTTGGTGGGCAAGATGAAAGAAATGAAGATGGTATGGCCCTTT
TGACTTGACTACAACCTTAAAAACCTTATGTGGTATGACTCCTTTCAAGC
CGGCTTTTGTTTTTTTTGTCGAAATCAATACCAACGAGATCGATCTGAGA
CTGAATCCGATACGGAGCATTCAGTCCGAAAAAAGCGGTTTGGCTCAATT
CGAATGGCATTAATCAAGACGGCCTTCGCCCTGTCAATCATTTGCAAATA
TCGAGAGAAGTGTCAGCGGGAACCACATGCTACACCCGACCAGGATACTG
GGCCCAATTACTAAATGCAGGTGGAAATAACTCGGAAAGTATTCCGCCAA
ATGAACGCCCTCCCAGGTTGAAACAAATGGCGGCCTAACTAAAAGCGACG
ACTAGAAAGGCAAGACATCATTGGCATGGTCATTCAAAACGAGGCGTATT
TGTTGCCAATACTTGAAACAGCTATCGATCTTTGGAACTTCCGGGTTTGC
AAACTAGATTTATACTATATACTGTTGTTTAGCGAGGTTTGAGAGACGGC
CAGTGTCCCAAGGTATGGATTTCCGCACACCAGGATGACTAACTGACTTC
GAGGTTGCGTGTTTGGAGGGTCAAGTTGGACCTCCAAATCACAAATAAAT
CCCAGATAAAGCGAGAGACGGGTCTAGTTTATTTGGTTGGTTAAGTACGG
ATGACAACAGAACCCCGTTCTCCGCCTTACCCCACCAACCTCGCCAGGGT
CAATATCCTGTCCACTAAACCGGATCTGGAAAGGACGAGCAGCGGGAAAT
ACAAATCCCCGGTCGCCACACGTGAATGTCACTCCATTGGTAAGCTCCCA
AACCAAAGAGACTTTGTAGCCTATTTAGTTGCCAGAGGAGTAGCATGGCA
AGTATGTGTCTACTTCGAGTAAGTACGCGTACCAGTCTCGTTGGTTTGGG
CGTTGACTAGTGAAGGGACACAAAATCAGTGATTCATCCTGGTGTCGTGA
AATCCATGCCCAAGGTCGCAAATTGATATTTTAGCCTATCACTTTTCCTA
TGGTATTCTACAATGTCTTTTAGGACGGTCGAATTGCCAGAGGTGTGGGC
TCTTTTGTAATAAATCTGACCTGGAGAAAGTCGAACTTTGGAGGAAAGTA
AATTCATAAATAGTATTCACATGATGAGGCAAGCAGCGTAGCTTAATGGT
AGAGTGGCACAATCGGTCATCTATCATTGCGTTATCCGAGGGTCGTTCGT
TCGATCCCCGGGCTGGCCAAGCTCCGGCATCTAGTGGTGTTCACTCACAG
CTATTGTTGGCTTCCCTGGTGGGATTAAAGTGGGCGGACCTGTGGTCATT
CCTCGAGGGTAAGATAATAATTCATGATAAATTTGACCGCCAGGCTGACT
ATGTCTCCTCGGAGATTTCCCTAGCTGGGCAGAAATGCCCATTAGTATTC
ACATAGTACAAAACAGCCTGCATATTGCATTGCTACCAAACTTTAGAGAA
TGCAATGATCGACAATGTTCCCTACGTATATCGTAGATCTACTTGTGAAT
TTGTAATTCAACATTTTGCCTTGTTGGGATCCTACAATTTCATTCATCTG
TGTAAGAAATTCACTTTTTGCCTAGTGTCCACCTCGACTAGAAAGCCGCT
TGTCTCATTGCTTGTGGCTCTGTATACGTACACTGTACAAGTTCCATTAG
GTCCAGCAACGCTTACTGCATCTACGATGTTTGCAAAGATTCATATGTCA
AGGGAGTCGACATACATGGTAAAGTGACATACTGGAGCGACACTCTTGAA
CCTGGTTCTGGTTTTAGTCAAACAAGCCCGAGAGCATAACCTCTGGAATT
GATAGAATTGCCTACAAAACAGCCTGCATCTGGCAGTTTGCCATTCTACC
ATGTGTATATTTTGGTTCACATTTCATCCGGATTCCATGCTTCATAGTTG
CGAACAAATATTCTCATCATATGTAGATTTTCACAATACCAAAATGCTCG
AAGCCTGCGCTTGGTTTGGGGAAGGATGGTTTGATTGATCACATCAAGCA
TTAGTTGGATTCAAAAGGTTTTGCGCCAGTAATCTCCTCAGGAGCCAATC
AGCCCTAGCGGTATGGTAGCGTGGCTTTTTTTGTTTCTTTGTTTGGAACG
CCCCGGCCATTTCTGCCCAACTAAGGAAATCTCCGAGGAGACATAGTCAG
CCTGGTGGACAAATTTATCATGAATTATCACCTTACCCTCGAGGAATGAC
CACAGGTACGCCCACTTTAATCCCGACAGGGAAGCCAACAATAGCTGTGA
TTTAACACCACTACAGGATGTAGTTGCCGGAATTTGGCCAGCCCGGGGAT
CGAACGAACGACCCTCGGATAATGCAATGATAGATGACTGATTGACAATC
AGTCATGGAATGATCTGGGAGGTTGCCCTCTTTACTAAGTAATCGTTCCG
CTGATATCGAGTGAGCAGATTATTCCTCCCACGTCGACACTCTGTTCTTG
CTTGCGCTTCCATGATGAAGCATCTTGTTGCCCGTTGGCAGATACCTTTT
AAGTGATAAATACATCTGGAATAACCCAATCGAACACGACGGAATACACT
TATTCCAAATCTATCATCGAAGGTCGTGGGTTCGATCCACGTGCTGGCTG
AGTTTCAGCCGCGGGTGGTGATAAATCGAAGCTTTTAAAGGACTTAAGTG
GGCGAATTGAATTAGTGAAGGAGGCGTTTCTGTGGTCATGTCTGGAGGTT
AAGGTAATAATTCATGATCAATTTGTTTTGCAAGGCTGGGCTGCATTTCA
ACTATTATTAGCCAAAATGTGGAGAAAAAGCCGTGGGCCTTTCGGGATAA
CTCTCGCCCAAATTGTATTTGGATACGACCAATTAGAAAAGGCATTCTGA
GCAAAAACTGTTGGCCTTAATTGGTTCTCTGAGTGAAATTTGTAGGCATG
GAGCATAATTTATTCTGTGTCAAGGCAATCAAGATGAACTGACTTTTGCT
CAAAATTGTCCGACATTTCGTTAAAGGGATCAGTGTCATAGTGGATATGT
CATACAGTTGTAGATATGTCATAGTGGAAGGGATAGCGTCTCAGTGGACC
AGTTACAGGAATTAATCATTTTTCACAACCGACCAAATATTGCAATGCAT
CTGAGAATCAGTCACCAAATATCGTTGGGTCTAAATCTCGGAGGCGGATG
CTTCGGCCACCACCGAGTTCTTGGGTGCACCACTCCTCATTTGACCGACA
GTCCCTGAACCGAGCTTATTCTGAAGTTTCGTGTTTTCTTTCCAGGATAA
GGCCGAGTTGGGATGTCTGCGTGCAATCATTCTCTTTAATCCCGACGCCA
AGGGCTTGGAGCAGGATCCGGCTCTTCAAGTGGAGTCGTTCCGCGAGAAG
GTCTACGCCACTCTGGAAGAGTACTGCCGCACCAACCACGAGAACGAGCC
CAGTCGCTTCGCCAAGCTCCTGCTCCGATTGCCGGCCTTGCGGTCCATCG
GCTTGAAGTGTGTGGAGCACTTGTTCTTCTACAAGCTCATCAAGGACGAT
GGACCCAATGGCAACGGGGCGGACGTGAACGACGTGGCCGCTCAGAGTCT
GGAACTGTTCATCAAAGAGATCCTCGAGGAGTGAAGTCACAGTGAGCGCG
CAAGTGCCGAAACTTTCATCGCGCAACCTCGAAAGATAGCGAGCGCCTTC
CCGACTTGAGTGCGAGATCAAAGTGAGTGGTGAGAGGGGATGAGCCCAGA
CTCACTTGTGAGCGTGGCAAAGTGCATTTATGAAATGTAAGGGGGTTGTT
TTGTGATCTCTGCCGACTGTACAATACTGATTTACGACACAGTGAGTGGT
GTCCTTGGATGCTCTCACCATCATTACTTAACCACCTTGATTGGGTTGTA
GATGGATCACATTTGCGTGGGCGCTTGGAGTATATATTTTCAAAATGTAA
GCCAATATCAGAGTATATAATTGATGCGATGGAAGATTTATATCCCGTAG
TACCGTCCGAAGGTACCCCTCCGTCACTCTAATTGTTATAACAAATGAAT
ACATACACGCAAGAGATGGATTAATACATAAGATGTGTTTTAATTTATTT
TTT

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