maker-scaffold63_size435493-snap-gene-3.28-mRNA-1, maker-scaffold63_size435493-snap-gene-3.28-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold63_size435493-snap-gene-3.28-mRNA-1
Unique Namemaker-scaffold63_size435493-snap-gene-3.28-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold63_size435493supercontigscaffold63_size435493:341789..344090 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
thap domain-containing protein 4maker-scaffold63_size435493-snap-gene-3.28Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold63_size435493-snap-gene-3.28-mRNA-1:exon:1280maker-scaffold63_size435493-snap-gene-3.28-mRNA-1:exon:1280Tigriopus kingsejongensisexon
maker-scaffold63_size435493-snap-gene-3.28-mRNA-1:exon:1281maker-scaffold63_size435493-snap-gene-3.28-mRNA-1:exon:1281Tigriopus kingsejongensisexon
maker-scaffold63_size435493-snap-gene-3.28-mRNA-1:exon:1282maker-scaffold63_size435493-snap-gene-3.28-mRNA-1:exon:1282Tigriopus kingsejongensisexon
maker-scaffold63_size435493-snap-gene-3.28-mRNA-1:exon:1283maker-scaffold63_size435493-snap-gene-3.28-mRNA-1:exon:1283Tigriopus kingsejongensisexon
maker-scaffold63_size435493-snap-gene-3.28-mRNA-1:three_prime_utrmaker-scaffold63_size435493-snap-gene-3.28-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
maker-scaffold63_size435493-snap-gene-3.28-mRNA-1:cdsmaker-scaffold63_size435493-snap-gene-3.28-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold63_size435493-snap-gene-3.28-mRNA-1:cdsmaker-scaffold63_size435493-snap-gene-3.28-mRNA-1:cds-2017329Tigriopus kingsejongensisexon
maker-scaffold63_size435493-snap-gene-3.28-mRNA-1:cdsmaker-scaffold63_size435493-snap-gene-3.28-mRNA-1:cds-2017330Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2017331auto2017331Tigriopus kingsejongensispolypeptide
Tk00834Tk00834Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk00834

>Tk00834 ID=Tk00834|Name=Tk00834|organism=Tigriopus kingsejongensis|type=polypeptide|length=276bp
MVSCCAFECFNSSPIHLLYRFPRDQARRRLWGVRVGRDKWTPSNHSKICR
VHFEDSMFEWKSDLGQWRLKKDAVPTLFKHKRFKSVRKKPTPRPCKEWEL
AHEAQIRRRMALMGVKLDHCYSTHQSPVLVSTTKKVDVVVKPAECFNDDI
PIAMDIEVDTINILDHPAYQPKPEPNWQQMYLRERQKNVGLMAGLKREKD
KSQKVQNKMGTVMGFFNEDQVLFLTRGSISGFSWTAATIKKALQLRFSCG
IAGYEGLLHQGFPLPSVRTLQRLSAA
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mRNA from alignment at scaffold63_size435493:341789..344090-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold63_size435493-snap-gene-3.28-mRNA-1 ID=maker-scaffold63_size435493-snap-gene-3.28-mRNA-1|Name=maker-scaffold63_size435493-snap-gene-3.28-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2302bp|location=Sequence derived from alignment at scaffold63_size435493:341789..344090- (Tigriopus kingsejongensis)
ATACCACGGAGCCAGAGATCAGCCCAAGATGGTGTCCTGTTGTGCCTTTG
AATGTTTCAATTCATCGCCCATTCATCTTTTGTACCGATTCCCCCGAGAC
CAGGCTCGGCGGCGGCTCTGGGGTGTGAGAGTTGGACGGGACAAATGGAC
TCCCTCAAACCATTCCAAAATATGCAGAGTAAGTGTTTGGATAGGTGTAA
AACTTCATGAATTAATACAATAGAGGTGCCTCCCTGGGATTGAAGCATCC
TGAATTATCCACCTCTCTGGCACACGATGGATGGGCCTGGACGAGCCGAG
AGTGAGACCCGATGATGGGCTATAGTCAAGTTTGGGACTCAATTGGTGCT
TGTCGACCAGGGTGTGACAGCGCGTGTTGGCCATGAGTGGGCATGTTAGT
CGAAGGTGAGACTCGGTTTTGAGAGTGGATGTTGCGCGGAGGGGCTTCCT
CAGATGTTCCCCATAGTGTTCAGCCGAGAGGACGGTGAGCAGGTGGTTAA
GAAATCCTTGCTGCTAATGAATCGTCCGGCTATCTCAATCTCCGTGTTAA
AACCTAGTATATTTCGCATACTAAGCATGAATCAGTCAAATATAAATGAA
CAGAAATTAACCTGGCATGGCGGTTCGAGGGTTGGGATGGGTATGGGGTT
CGGTTGTGGAAAGTGAATGATACGAGTCGGGTGGCTTTTTGGACAGAAGG
GATACAGCTCAAAAGTGGCGTTCGGGGAAGGAGATGCCCGTACAAGAGTT
CAGGGGATCACGACATCTCGAATTTATTTTGAAAGTAAGACCTTTCCATA
ATGAGCACACATTTATTTTCCAATAACAAGTGTTACGCTAAAACTTGTTT
CTCATTCTTTTTAGATTCTTAATCTTCTTGCAATATTTTTTTTTTTTTAA
CTTTTTAGGTTCACTTTGAAGATTCTATGTTTGAATGGAAATCCGATCTA
GGCCAATGGCGGCTCAAAAAGGATGCGGTTCCAACCCTGTTCAAGCATAA
ACGATTCAAAAGTGTGAGGAAGAAACCTACCCCCCGGCCATGCAAGGAGT
GGGAGTTGGCTCATGAGGCTCAGATAAGACGCCGGATGGCTCTGATGGGA
GTCAAATTGGATCACTGCTATTCCACTCACCAGTCACCTGTACTTGTCTC
AACCACGAAAAAAGTCGATGTAGTGGTCAAGCCGGCCGAATGCTTCAATG
ATGACATTCCGATTGCCATGGACATTGAAGTGGACACCATCAACATTTTA
GACCACCCAGCCTACCAGCCCAAGCCAGAGCCAAATTGGCAACAAATGTA
TCTACGAGAACGTCAAAAGAATGTTGGCTTAATGGCTGGTCTTAAACGTG
AAAAGGATAAATCACAGGTAAGACATTACTTGATGACGCTCTTCTACCAT
TCTCATTTTTCCCGTTACGTTCACTTACAGAAAGTGCAAAACAAAATGGG
GACCGTCATGGGATTTTTCAACGAAGACCAAGTTCTGTTTTTGACCCGTG
GAAGTATCTCAGGATTTTCATGGACAGCTGCCACCATTAAAAAGGCACTC
CAACTCAGGTAGGTTTGATCTTGACACATGAAATTGAGGCGGTTAATTAC
GTAGGTATGATCTTGGCTGGCTACCTAAACCGAGGACAGTGAAATAAATA
TGTATTCATTATGCAGCCTTACTGTTAAACATTTAGCGCTGCGAATGGCT
GATTCAGACGTGACCAACTAACAGTACTATTTTATAGATTCATTATACAT
TCCCAATCGACGAGTTATGCATTTAATTTTGCCCCTTGTGATCCAACCGT
CTTCTCTGCATACTGTATGTTACAACTACAACCTACAACGAAATATGACA
TCATTGAAAATAAATGTGGTATATATTGACAAAATAATTATTTCAGATTT
TCGTGCGGAATTGCTGGATACGAGGGACTCTAGCACCAAGGATTTCCGTT
ACCATCTGTCAGATCATTGAAAAGAAATGTGGTATATATTGACAAAATAA
TTGTTTCAGATTTTCGTGCGGAATTGCTGGATACGAGGGACTCTTGCACC
AAGGATTTCCGTTACCATCTGTCAGAACACTTCAGCGCCTCAGCGCAGCA
TAAATGAGCGAACATGCGGCCATACCTCAAGTGTAAGGTAACAATTCAGG
CTGAAAAAAATATCTCAAAATGGGTGTCTTCGCAAGACAAAAATGATCTG
GAGCCAATTAACCAAAGAAACTTATTATAACAGCAACGCAGATCAAATCG
GATTATTATTGCTTTGTCCCTGATTTCTTTGATATGATCAATACTTGTTC
TG
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