snap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1, snap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1
Unique Namesnap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold180_size281610supercontigscaffold180_size281610:45478..50434 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
rho gtpase-activating proteinsnap_masked-scaffold180_size281610-processed-gene-0.4Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1:exon:348snap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1:exon:348Tigriopus kingsejongensisexon
snap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1:exon:349snap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1:exon:349Tigriopus kingsejongensisexon
snap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1:exon:350snap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1:exon:350Tigriopus kingsejongensisexon
snap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1:exon:351snap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1:exon:351Tigriopus kingsejongensisexon
snap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1:exon:352snap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1:exon:352Tigriopus kingsejongensisexon
snap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1:exon:353snap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1:exon:353Tigriopus kingsejongensisexon
snap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1:five_prime_utrsnap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
snap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1:cds-1976635Tigriopus kingsejongensisexon
snap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1:cds-1976636Tigriopus kingsejongensisexon
snap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1:cds-1976637Tigriopus kingsejongensisexon
snap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1:cds-1976638Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1976639auto1976639Tigriopus kingsejongensispolypeptide
Tk11860Tk11860Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk11860

>Tk11860 ID=Tk11860|Name=Tk11860|organism=Tigriopus kingsejongensis|type=polypeptide|length=695bp
LEPQRNYKFCRVKFGVPLDQVCKRDIPGPLLVMLLKLNKEGPFKKDVFRA
PGHQGNMRKLIHFLQQGRLVNIHGFSVNTIASVLKKFLRKIPGGIFGPEN
EAELFSIVKVDNKEERLAKIQSVFMSLPIYSQHLLVLLFGTFREIHRNSE
RAQTGMTAEALGVSVAPSFFQTCVAGGKTAKMEDVERFKLATKVTTFFID
HFGIRELFGRENYEYYAKLSGRILRVEDEWIFFTYPPVAFGSGTRDDMDP
SLDCLGSNGEDRHPTAALEKTGSLEIIPENCTLDPQGRLSISLDDQNVST
PSSCGSPSVMVGISEVHAAGFRSQTLGRAGPQQHRQLLANAAILQQQSET
LPRRPGRDSRSHIAPCLPQVHQKQTERMKHRSEWFLSDASGLVTVKCGLR
SHTPGGEGGSSSSRPSSLLSTSTNTPISNVYPPPSFSSSARASAGRVLSS
NDSLSVTPTPSSSSVAHTPSQSSNRGPKGICDTSKLSASLTPIHSPPSYH
AKVMASSIGTPTTPSAFNVQGILATPTSSPPIQSTPLPQATVSLRRRLSD
KERRLVRRSSSKKKDKENGGSPGGAGVTSALGPGTPDKHMGGSSSALNSS
SESSGTPPSSHGSGHFIVGLEGVAARPPLKRTGSVDGQSTSGPTSSHQHA
MLCRTGSQDTPHQATPSGASSQPPQHPQLRSTGSESPLTRSLPRI
back to top

mRNA from alignment at scaffold180_size281610:45478..50434+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1 ID=snap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1|Name=snap_masked-scaffold180_size281610-processed-gene-0.4-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=4957bp|location=Sequence derived from alignment at scaffold180_size281610:45478..50434+ (Tigriopus kingsejongensis)
ATTGTTGTGGGCTGGAACCTCAACGGAATTACAAATTTTGCAGAGTCAAG
TTCGGTGTGCCTCTCGACCAGGTGTGCAAAAGGGACATCCCGGGACCACT
TTTGGTGAGTTCAACTCGTATTTGTGTTTACATTACATCACAGACTCTTC
CCCCCACTGGCCGTGTTGACCAAGCCGCGCATCCGGCAAGTGTGTAGTGA
TCGGACAATCACTCAACGAGGGTCTGATTTGGTCTCACTGGTGCTCAGTG
CGTGGATGAGTGATGCACTTGGCCATGAGCGAAGTTCATTCATTTTCCCT
AAACAAAGGCCCCTACGTCTTGATTAAAGGTCATGCTACTCAAGCTGAAC
AAGGAGGGGCCGTTCAAGAAGGACGTGTTCCGGGCACCGGGACACCAAGG
CAACATGAGGAAGCTGATTCACTTTCTCCAGCAAGGCAGACTGGTCAATA
TCCACGGGTTTTCTGTCAACACCATAGCCTCTGTCCTCAAGAAGTTCCTC
CGTAAGATCCCTGGAGGAATCTTTGGCCCCGAGAACGAGGCGGAGCTCTT
CAGTATAGTCAAGGTGGATAACAAGGAGGAGCGACTGGCCAAAATTCAAA
GGTACCATCCCCACCAACGCCCTCTAAATGAAGCCAATCTGAATCCCGCC
CATTGAATGCCTGCTCTCTCTCTCTTCTTGCAGTGTGTTCATGTCCCTTC
CGATCTACTCCCAACATCTGCTCGTACTCCTATTCGGCACGTTTCGCGAG
ATTCACCGGAATTCCGAGCGGGCCCAAACTGGAATGACCGCCGAGGCCTT
AGGTGTGTCCGTAGCACCTTCGTTTTTCCAGACATGTGTGGCCGGTGGCA
AGACAGCCAAAATGGAGGATGTGGAGCGGTTCAAGGTGAGAAATTCAAAC
TGCGATATCAAACGAACTAGTGTTTTCCCCCTCTCCGAGTGGTTCTGATG
ACACACGGATAATTTGCATGACTCACTCTGCCATCAGCCCCGATACCACG
ATGTTTGAACTCATAAGTCGATTGAGACGAGGGATTGCGTTATTGACCCC
ATCCCGTGAGAAAAAACTAGGGCCTTAGTCCAGGGATTCAAGCAGTTCGA
GTGAGCTTCCGATGAAAAATATGTCCATCCCCTCGGCTAAAAACCTGACT
TTGTGGGTGTGATAACGCATTAACGACACTATCACGTGTAATCAGAGCAA
GAAAATGGTGGACACAACAACAACTTGTTGGATGACTTGGCACCCCATCC
AGCACTAATTAATGCTTGGTGGGCTGTAATCCTTGTCGGACTCCTGTAAA
CAGTTATTTGGTGTCGTTTTAATTTTCCTGACCGGTTCTTTGTTCTTCCC
CAGTTCCCTGAACTGCTCCTGCCCTTCATCTGTTTGTTTAGAGTCCTGGG
CGCCTTTTTCGATAACACGAGTGTGTTAAATTGGGACTGTGTTGACTTGG
TTGATGCGCAGAGTGATTTGCCTGTTATAAGAACTACTACTACACCCTGG
GATTTCGGAATGCAAAAAAGGTCTCTTATTTAAACTTGGCTCGTCGTCAT
TCTCCTGCATTCACACTGCCCCTGCACCTAGATTGTGTTTTTCGCACATG
ATCATTTGCTTGTCCTATGGAGATTCCACATATGCGCTGACTCAATAAGC
CTAAGCTGCCCGAAGGTTTTTAGAGTTCCTTTAGCTATTTACACCGTTTC
TCCATCGTGTGCTCTCTGACCCATTCTTGTCCTTGACGCCAAGTCTAATC
TCTGTTACTAGGAATGCCTTGAAGATTGTTTAGAGAAATTGTCGGTAAGT
TCCCTTCCAGAATCACCACCCACCTGATCCAAGCCAACCTAAGATGCACG
GACAATGGCCACTGTTTCACAAACATTACCCAACAACACACATGCTTCTC
CTTCTTTGTTTCGAGGACATTTCTCGATTGTAGCTAACTCTTACCATGAC
ACTACCCGATCGTAGTCGATTTTGAACGCTTTTGTACATTCTGAATGTCC
TGTGTCCAACCAAAAAAACACCAAGTGCTCAGATACCACTCGACCACGTT
AGACAGTAATTTCACACTCCAATGTTCACAACGTAGTGTTGAGTGTACAC
TCTTTAACTGGCTTGTGCACCAAGATTGTCGTGTGTTGACACGCGTCATT
GGGGTAAGTGATTAAACACTGACCGTGGTGGACGAATCAAAACCAACATG
CATGATGGTTCGTCCTTCTTAGCGTTTTTCAAAACCGCACACATACATTC
GTATCATTGGCTCTCGACCAATATTCAGATCGTGTTCAGTATCATGAAGT
GTGGCTCCAGACTTGTGACAGAACACTAAATTGTCGACTAATATCTCGAT
TCTCATCTCCTTTCCAGTTGGCCACCAAGGTGACAACCTTCTTCATAGAC
CACTTCGGCATTCGAGAGCTCTTCGGCCGAGAAAACTACGAGTACTACGC
CAAATTGTCGGGTCGAATCCTCCGGGTGGAGGACGAGTGGATCTTCTTCA
CGTACCCACCGGTGGCCTTTGGCTCGGGGACCCGCGACGACATGGATCCC
AGTCTGGATTGTCTGGGCTCCAACGGCGAGGATCGCCATCCCACAGCCGC
TCTAGAAAAGACTGGTTCACTCGAGATCATTCCGGAGAACTGCACCCTGG
ATCCCCAAGGACGGCTCTCGATCTCCTTAGATGACCAGAACGTGTCGACA
CCATCCTCTTGCGGGTCTCCCTCCGTCATGGTTGGTATCTCCGAAGTGCA
CGCCGCTGGATTTCGAAGCCAAACTCTGGGTCGTGCCGGCCCTCAGCAAC
ACCGTCAGCTTTTGGCCAATGCGGCAATCTTGCAGCAGCAAAGTGAAACG
CTTCCACGTCGGCCTGGCCGCGATAGCAGGTCTCATATAGCCCCGTGCCT
ACCCCAGGTGAGCAGCACGAGTCCGAGGATGAACAGACTATCCCACCTGT
ACCCGATACCCCCGAATTTCGGCCATGCCATGAGTGACACTGCCCAAAAG
CGATCCTACAAGAGACACTCTTGCCGCCTCTAGCTAGAAGTGGTGAACGT
AGTGTGTTGATTCGTATCCTTCGACCGTTGTTGACGCCTCGACGGTGCAC
GCCAATCCGTGTGCCGTACGACAGTGGTGGTATCAGGACTTCCAGACCCT
CAATTAACCCGCCCTAGTGATGACACAACGTCGTTTCCTCTAAATTGCAC
GCAACTGATTTTTGATTGTTTGGTCTTTGCTCCCGGGATGAGTCCTGAGG
CCCGATCCTACTTGGGAGCTCACGGTGTGACGACATAACATTAATGCATG
CCGATGTCGATGGCTTACATAGCTCAGAGTTGCTGGATGATCACGTCATG
GGAGCATAGAGTGACACTGAGTAAGCCACATGGTGAAATACCTCAACTAT
ACAGTACTGTACGTAGCTCCATACATTGTTTTGTTGTATCACGAGTTGTC
TGTGTGTGCTTTGGTACTCGGGTGTTGAGGCAGCTCATAACCGCGCTAAC
CCCAGTGTTCCGCAGAGGATAGGTTCCGCGTTCATGTGCTGTCACTTTGG
TTGCTTCTTGTGTTGTCCGTTTCCCCCCCGTCTCGCTCCTGAAGGCTAAC
GAGTAAAAAATCTCCTTTCCAGGTCCACCAAAAGCAAACCGAGCGAATGA
AACACCGCTCGGAGTGGTTCTTATCCGATGCGAGTGGGCTTGTGACTGTG
AAATGCGGACTTCGGTCCCATACCCCGGGAGGAGAAGGAGGCTCTTCCTC
CTCCCGCCCTTCCTCCCTTCTTTCCACAAGTACCAACACGCCCATTTCGA
ATGTGTATCCTCCTCCTTCCTTCTCCTCAAGTGCCCGAGCATCAGCAGGT
CGTGTGCTCTCTTCCAATGATTCTCTCTCGGTCACGCCCACTCCCTCCTC
TTCCTCTGTGGCGCACACTCCCTCCCAATCTTCAAACCGAGGCCCTAAGG
GTATCTGTGATACTTCCAAGCTCTCAGCATCCCTCACCCCCATTCATTCG
CCCCCGTCATACCATGCCAAAGGTAAGTTGATTGCGTTTCTTTCTAATTG
AATAGGAAGGCAAGCACATGTGTAGTACATCATTTGGCAGAGAATGAAAG
TTATTGTAAGATGTCCCCTTTCAGTTATGGCCTCCTCCATCGGCACGCCA
ACGACACCATCTGCATTCAATGTCCAGGGTATCCTGGCCACACCAACGAG
TTCGCCACCCATTCAATCCACACCCTTGCCTCAAGCCACGGTGAGTCTGA
GACGAAGACTCTCGGACAAGGAGCGGCGGCTAGTGAGGAGATCCTCCTCG
AAGAAAAAAGACAAGGAGAACGGGGGCAGTCCAGGCGGTGCGGGAGTCAC
GTCCGCCCTCGGACCTGGCACCCCCGACAAACACATGGGAGGATCGTCAT
CGGCCTTAAATTCATCCTCGGAGAGTAGTGGCACCCCGCCCTCCTCCCAC
GGCTCGGGCCACTTCATTGTGGGCCTCGAGGGCGTGGCGGCCCGGCCGCC
TCTCAAGCGCACCGGCTCAGTGGACGGCCAGAGCACGTCAGGTCCGACCA
GCTCTCACCAGCACGCGATGCTCTGTCGGACTGGATCTCAAGACACACCC
CACCAAGCCACACCCTCAGGAGCGTCCTCCCAGCCCCCACAACACCCACA
GTTGCGATCAACGGGGTCCGAGTCTCCACTCACCCGCTCCTTGCCCAGGA
TTTGACAGTCAATCGACCAACACTGGTTCATGACGTTTTTTCAAACCCAA
TCGATTGCCCCAAGATTTCATCTATCCCCTCTCACTTTAGAGGGTGTGGC
TCCTCCCCACCCGATCCACCGCCACCACGACCTACCAAGAAATCTACACT
TGTCTTCAATCGAAATGATCGTAAACCAAAGCGCTTGACCTTTATATGCC
TTCAAGATACAAGTACTGTACTTCTTTTCATACTACAACTACCTACTACT
ACTACTA
back to top
Add to Basket