snap_masked-scaffold1_size3401120-processed-gene-14.18-mRNA-1, snap_masked-scaffold1_size3401120-processed-gene-14.18-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold1_size3401120-processed-gene-14.18-mRNA-1
Unique Namesnap_masked-scaffold1_size3401120-processed-gene-14.18-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1_size3401120supercontigscaffold1_size3401120:1461872..1465884 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
cytidine deaminasesnap_masked-scaffold1_size3401120-processed-gene-14.18Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold1_size3401120-processed-gene-14.18-mRNA-1:exon:1073snap_masked-scaffold1_size3401120-processed-gene-14.18-mRNA-1:exon:1073Tigriopus kingsejongensisexon
snap_masked-scaffold1_size3401120-processed-gene-14.18-mRNA-1:exon:1074snap_masked-scaffold1_size3401120-processed-gene-14.18-mRNA-1:exon:1074Tigriopus kingsejongensisexon
snap_masked-scaffold1_size3401120-processed-gene-14.18-mRNA-1:exon:1075snap_masked-scaffold1_size3401120-processed-gene-14.18-mRNA-1:exon:1075Tigriopus kingsejongensisexon
snap_masked-scaffold1_size3401120-processed-gene-14.18-mRNA-1:cdssnap_masked-scaffold1_size3401120-processed-gene-14.18-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold1_size3401120-processed-gene-14.18-mRNA-1:cdssnap_masked-scaffold1_size3401120-processed-gene-14.18-mRNA-1:cds-2021775Tigriopus kingsejongensisexon
snap_masked-scaffold1_size3401120-processed-gene-14.18-mRNA-1:cdssnap_masked-scaffold1_size3401120-processed-gene-14.18-mRNA-1:cds-2021776Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2021777auto2021777Tigriopus kingsejongensispolypeptide
Tk04891Tk04891Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk04891

>Tk04891 ID=Tk04891|Name=Tk04891|organism=Tigriopus kingsejongensis|type=polypeptide|length=296bp
MSDVTVDQREELVEAAKAVRLKAYAPYSQFLVGAALLADDGAIYSGCNVE
NAAYPEAPLAQAGSSLTGSIRYGLNYSDDGTNDAQINIENFGSRIKMAGD
SDLGNGMTGYGKLELRLNADRNSNVVNRMYAVGVKGNFGDLSFGLQDTAF
DIANPDRTWWNGGTGLVGKRNEKNGAVVYKKSFGDIEMRAGAQMINNAVD
AEETADIFDFGVKYAANNITLAAAMQNDAASDGTATAISGGYNFGAGDFT
VTYGVEDEDFSGAGADKTGIDIQAGFGNFYGWYKALQCLYGDAQED
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mRNA from alignment at scaffold1_size3401120:1461872..1465884+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold1_size3401120-processed-gene-14.18-mRNA-1 ID=snap_masked-scaffold1_size3401120-processed-gene-14.18-mRNA-1|Name=snap_masked-scaffold1_size3401120-processed-gene-14.18-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=4013bp|location=Sequence derived from alignment at scaffold1_size3401120:1461872..1465884+ (Tigriopus kingsejongensis)
ATGAGCGATGTAACAGTTGATCAGCGGGAGGAGCTGGTAGAGGCCGCAAA
GGCCGTGCGGTTAAAAGCTTATGCGCCGTATTCCCAGTTTCTGGTCGGTG
CGGCTCTGCTGGCTGATGATGGTGCGATTTACAGTGGCTGCAATGTGGAA
AATGCGGCTTACCCCGAAGGTACCTGCGCAGAAGCGGGTGCCATAGCCGC
GATGATTGCGGGAGGAGGGCGGTCAATACAGGCGGTTGTTGTAATTGGCT
CGGGTGAATCGTTGATTAGCCCCTGTGGTGGTTGCCGGCAAAAGCTTGCC
GAGTTCTCTGAGGCAGGTGTGCCTGTTTATCTTGTGAGTGTTAGCTCAGG
TGAGACAGCCACTTATTCTGTTGCAGATTTGTTGCCGGCGAGTTTTAGCC
TGTAAATTAAAATGCCTCAAGTTAGGCCGCTCGTGCGGCTTTTGAGCCTC
CCTTCCTCGTCTATCCCTTCAATTTCCTCTTTTGTTGTGCTTTTGACAGA
AAAACAACAACCCGCGAAGCGACTCCTTGGCGTGAAGGTGTTGTTTTTTT
GCCGATTCAGGCATTTGTTGTGACTCGGTAGAAAAAAACCACATTTCATT
TTGCCTCTAAGTCATTGATATTTGTCGAATGCAGTAAAAAAACAACAAAA
TGTTGTAAAAAAGTTGCACAAACAAAAATGCGGGTCTAAAGTCTTATTAC
GTTGGGCAACACAAGACCTCTAAGGGGCTGCCCACCAGCACAGCTTAGAA
CTATCATCATTACTGGGATATATTCAAAATGAAAAAATTACTTCTTTCAG
TCGCTGTTGCAACTATCGTTGCAGCTCCTTTGGCCCAAGCGGGCTCTTCA
CTGACTGGTTCTATCCGTTATGGTCTGAACTACTCTGACGATGGCACCAA
CGACGCACAGATCAATATTGAGAACTTTGGTTCACGTATTAAGATGGCTG
GCGACAGCGACCTTGGCAACGGCATGACTGGCTACGGCAAATTGGAACTG
CGTTTGAACGCAGACCGTAACTCTAACGTCGTTAATCGTATGTACGCTGT
TGGTGTTAAAGGCAACTTCGGTGATTTGTCTTTTGGTCTGCAAGATACAG
CTTTCGACATTGCTAACCCTGACCGCACTTGGTGGAATGGTGGTACTGGT
TTGGTGGGTAAGCGCAACGAGAAAAACGGCGCTGTTGTTTACAAGAAGAG
CTTTGGTGACATTGAAATGCGCGCTGGCGCTCAGATGATCAACAACGCTG
TTGATGCTGAAGAAACAGCCGATATCTTTGATTTTGGTGTTAAGTACGCT
GCTAACAACATCACTCTTGCTGCTGCTATGCAAAACGATGCGGCGTCTGA
CGGAACTGCTACTGCCATTTCTGGTGGCTACAACTTCGGTGCTGGTGACT
TCACTGTTACTTATGGCGTAGAAGATGAAGACTTCTCAGGTGCAGGCGCA
GACAAGACTGGTATCGATATCCAGGCTGGCTTCGGTAACTTCTACGGCTG
GTACAGCCAGACTGAACTAGACGTTGATGGTGCAGCTACTCCTAACCGTA
TCGGTGTTGGCTACACTCACAAGATGAGCGATCAAATGTTGATCTGGACT
GAATTGTTCCAAACTGATCCAGACACTGCTGGTTCTGACTCTTCAATGGC
GCTTAACACCGTATTGAAAATCGACTTCTAAGTCGCCTTTTCTAATACCA
CGCACAGCTCTGCTGTGAGTGATTGAAGATAAAAAAGCCTTCATCTGATT
CAGATGGGGGCTTTTTTTTGAGAAAAAATTTTTAGTTTGCACAAAACCGC
TAGGAATAAAATAAGCGCTGAATGGCGAAAAGAGTTTTGTTCTGCCGGCA
AGCCTAAGAACTTTTGTTCCCGCTTCTCTTTCGAATAGAGGGAGTGGTGG
CAGACTGAAACAGCGTCTTCATGACCTATTCAGGCTTGTTAGAGCTGCTT
TTCTGGCTCCAACGGATAAACAAAAGAATGGGGTAAGAGCCCATCATCAA
CAAACCTAATCCAATGAGTGTGGCGTAAAGCATCATCGAGCGGGTTTCAG
GGGCGTTGTTTGTCCAGAGGGAATAGATTCCAAAGATGAACATTGCCAAT
CCGAGCCAATGCATGGCGGAGAGAAACCGCAGTAAACGTTCTGTGTTCAT
GAGCTGAGCCGAGAGTTCGAAGTCAAGTCAAGTCATCATAGCAATTCGAA
TCAAGAGCGCGAAGTGCGGATGAGTTTGTCGTGCGCATAAAAAAACCTCT
GAGAAAATCTGAGAGGTTTAAGGATCAGGCCGAACCTAAAAGGGCCTAAA
TATTATGGCTCGCCTTAGATTTCCAACTGTCGTATTCGGCGACTATCCCG
TCGACGGCTTCTTGATCAAAAGGGCGTAGCCCGCTCAACAGCATGTTCTT
CATGCCGGAGCCGATGGTTTCATCGCCCGATTTAATATCAAACATCAAAG
AGGCTTCGCCTTTTTTGCCGTCTGCTTTGAACTCTGCCCCTGTGTACGCG
AGAGAGATGTCCTCGCCATTACAGGTTTCTAGTGTGAGAGACATTTGACG
ATACATGACGATGGGGCGTGCGGGATTAATCATCGCATCATTTTCTTTCA
TCAGCGGCACAAGAATGTGCGGAAAGGTTTGCCCTGAAAAGGTGACATAT
GCGCGCGTAAGGGCATCGATGAATTTGGCATCGCCGCAACTTTGTTGATT
GTGTTGAGCGATGATGAAATCAGAGCCGCTTTCGCTGGAAAATTTTATCT
GCCCGGACGTTTTTTCGGTGTGCACTTCAGACTTCTCGGTCACCATGCCG
GCAAACTCAATCTGCATGTGGCGAAAAAGCCCTTGTTGGTGCAGTAACAC
GGCAAATAGCAGATCACCTGGTACGCAAAAGCGTCTCGCCTCTATGTCGT
GAATGGGGTTGAAGTCACCTGCCACTTGCTTGGCAAATTCGCTCGCTTGT
TCACGGCTAAAGCGCAAGGTAGCGCCTTTTACTTGAAAATAGTCTTGTAG
GTTCATTGCTCGATTTACTTTCTGCTTTGGGCGGTTGTTGTTTTTTCTCT
AGAAACGGTGCCGCTCACTTAGCTGGACAGCGAGGAAGGCAAAGCGACAC
TGTGGTTTTTTGTAAAAACGAGTGACTAGAGATCAGGTGTTGGCGTTGAG
ATGTCGTAGTACTGTAAGAATTTAAGACACAGTCTACCAGCCTATCAGCC
GACGAGCTCAATAGAGATAAGGGATTTTGGAAGCGTGGGGAGTGAGGGAA
AAGTGTAAAAAGCCCAAGTTCAGAACGAACTTGGGTCAATTGCTCATCTG
AACTTACTTTGCCGCGTCAAGAGAGGCGTAGTAAGCAGAGATATCTGCCA
TGTCTTGCTCAGAGAGAGCGGCGACCATGCCAACCATTTGGGCTGCGTTT
CCGCCCTTGCGGCTGCCGTCTTTGAAGGCTTTCAACTGAAGAACCATATA
GTCGGCTTTTTGGCCGGCTAAGTTGGGGAAGGTAGGACCGATGCCTACAC
CGTTAGCGCCGTGGCAAGCTGAGCACATAGCTATCTTGCCTTTGCCGGCA
TCGGCACTGCCAGCAGCCATTGTGGTGCCACAAATTGCTGCAAGGCTCAC
TGCCATAAGGATTTTTTTCATCGATTGCTTCTCCGCGATAGAGCATAAAA
GAGTCTGGTTTCGAAAGTGTAGGTGAGTTGCAGGACTGTATGCCCTCACC
TTTAAAATATTGTCGCTAAGCCATCAACAGACATCGGCAAGTATTACCAA
AAATCAATGGTGTATGCCGCTGATGCTTGAGTGATATTACACTGAAACGT
TTTAATATTCAAAAAGCTTCATGCGTTATTGTTGTTTCTGCGAAAACTAA
AATATTAGTAAATCAGTCGCTTAAGCTGTTTTGTAGGCTTTCCACTCACT
AATATATAGGCGAGTAAAGCTCCGCTAATATTAGCGACTAGATCCCAGAT
ATCCGGCATTCTTCCAGGTACAAAGCCTTGCAGTGTCTCTATGGCGACGC
CCAAGAGGATTGA
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