snap_masked-scaffold370_size193435-processed-gene-0.29-mRNA-1, snap_masked-scaffold370_size193435-processed-gene-0.29-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold370_size193435-processed-gene-0.29-mRNA-1
Unique Namesnap_masked-scaffold370_size193435-processed-gene-0.29-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold370_size193435supercontigscaffold370_size193435:186852..189766 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
short stature homeoboxsnap_masked-scaffold370_size193435-processed-gene-0.29Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold370_size193435-processed-gene-0.29-mRNA-1:exon:1166snap_masked-scaffold370_size193435-processed-gene-0.29-mRNA-1:exon:1166Tigriopus kingsejongensisexon
snap_masked-scaffold370_size193435-processed-gene-0.29-mRNA-1:exon:1167snap_masked-scaffold370_size193435-processed-gene-0.29-mRNA-1:exon:1167Tigriopus kingsejongensisexon
snap_masked-scaffold370_size193435-processed-gene-0.29-mRNA-1:exon:1168snap_masked-scaffold370_size193435-processed-gene-0.29-mRNA-1:exon:1168Tigriopus kingsejongensisexon
snap_masked-scaffold370_size193435-processed-gene-0.29-mRNA-1:exon:1169snap_masked-scaffold370_size193435-processed-gene-0.29-mRNA-1:exon:1169Tigriopus kingsejongensisexon
snap_masked-scaffold370_size193435-processed-gene-0.29-mRNA-1:cdssnap_masked-scaffold370_size193435-processed-gene-0.29-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold370_size193435-processed-gene-0.29-mRNA-1:cdssnap_masked-scaffold370_size193435-processed-gene-0.29-mRNA-1:cds-2007709Tigriopus kingsejongensisexon
snap_masked-scaffold370_size193435-processed-gene-0.29-mRNA-1:cdssnap_masked-scaffold370_size193435-processed-gene-0.29-mRNA-1:cds-2007710Tigriopus kingsejongensisexon
snap_masked-scaffold370_size193435-processed-gene-0.29-mRNA-1:cdssnap_masked-scaffold370_size193435-processed-gene-0.29-mRNA-1:cds-2007711Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2007712auto2007712Tigriopus kingsejongensispolypeptide
Tk07800Tk07800Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk07800

>Tk07800 ID=Tk07800|Name=Tk07800|organism=Tigriopus kingsejongensis|type=polypeptide|length=348bp
MISIGLSTEDDSPTSTLHQESNELENPGKTPGDSSMDLTSQNNNKPRRSR
TNFTLEQLNELERLFDETHYPDAFMREELSDRLGLSEARVQVWFQNRRAK
CRKHESQHFKSVTATPTPIGNNPGCGAGQNLSSIGTPISAVPGSRLAGLL
RSSNGPIPPMQSGMGGIKKPPSPSSSPMNASGPHAMDLSRGTPLPKASFT
DRLKEHALRSFDTHSRALISAQQYAAVAVAALKGSNNPSPFLSGLSNSLL
VSTLLQNSKLPHSTSSDTPIFPPFPSALFSNSHSSLAPLPFPSSMPTLRL
GHRSGGGSNGLSHDLASMDPFKSKSSSIADLRLKAKRHQEALGISESD
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mRNA from alignment at scaffold370_size193435:186852..189766-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold370_size193435-processed-gene-0.29-mRNA-1 ID=snap_masked-scaffold370_size193435-processed-gene-0.29-mRNA-1|Name=snap_masked-scaffold370_size193435-processed-gene-0.29-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2915bp|location=Sequence derived from alignment at scaffold370_size193435:186852..189766- (Tigriopus kingsejongensis)
ATGATCTCCATAGGTGTTGGTTTTGCACTCATGAATGAGTGCCAAAGCAG
TCATGCGTGAGGACCAACTATCTGCCTCCTGTGAATGAGCCCATGACCAG
ACCGTGAACTGGTGATAATATCACTCGTGTGTGTGAGGGGGAGTTTGAAA
TCATTTACCGTCAGACTTGCATCTCTTCATTTCTCAATTCTAGGTCTTTC
AACTGAGGACGATTCACCCACCAGCACTTTGCATCAGGAGAGCAATGAGC
TGGAGAACCCAGGCAAAACTCCAGGGGACTCTTCGATGGACTTGACCTCT
CAGAACAACAATAAACCCAGACGGAGCAGAACCAATTTCACTCTAGAGCA
ATTGAACGAATTGGAGAGACTCTTTGACGAGACCCATTACCCTGATGCAT
TCATGAGAGAGGAGCTAAGCGACAGATTGGGTCTGAGTGAAGCGAGAGTA
CAGGTAAAGTAATGACAATAGTCCCGTAATTAATTTCATAGCAAAGTCGC
AGTGATCATTGGTACACTGGTCGCACTGTCGAGGACGAAACAGACACAAC
TCCAAAGTGTCAATCATTGACCAAACCAATCAGTTATGAGCCATTAAAGT
CGATTATTTCACTGATTTATGGATGGAAAAACGATTATTTATCTCTTACA
TCGATTTGTCGAAAAACAAAAAAGAATTATTGTTTTTTTCTGAAATTAAA
TCGATTATCTCGTACATAGCGAAGCGACCTGCGAGGGACCAATCAGAGTA
ATCAGTTCGCAGGCCACTACGAGTAGAGGCTTGATGTGTGTACATTCTGT
CTTTTGCAGCGATCAGTACCAGCAGTCTCACATTGCATACTTCCGACGAT
CTAGTGTGCTTTTGGATTGTTGGATGGATATAAGGATAGCCTATTGTAAC
CTATATAGTATATATATAAGCCAACTAGCGTGTGAATACAGAAAAGTGAA
ATTCCAGGTTCCTTTATTTCACCGTATCAGGTCCCTTTCAGAGTGCACAA
AGGCTAATATTAGGCATGGGTAAACGAGTTAGTGATAGATTTGACACGCA
AACATGTTTTAGTGGTGGTGGAGTTGATCGCTCATCAGTTTCAATTACAA
GTTTGGATACACAACATTAGACCATCAGGGCACGCCCCGAGGGATGACCA
TTACTGGCAATCAATCAGTAGGGATGATCCTCTCTCATCAGATTCCCATT
TTCTCAATCATCATCATTGGCGATGGATTCGTAACAGCGCCTCTCAATCC
ACTGAAAACAATCCTTTTCGCGCACCAAGGTCCCCTTCAAGTGATCCACT
GAAGAAAATATCCTCTCCAGTAATTGCTGGGAGTTTGAATGGAACACCTT
GTAATACTGTATATTCGATGCAATTTGAATAGCAAGTTTCCACCCTGCAG
GTGGGGGAGAAAATCCTTGTGTGATACAATCAAAAGTTGCCTAGGGGACC
ATTTTAAGCAGTGGTGAACAATTCTGGCACTCAAACTTGGACGATGCTGT
TCCCTCTTCGCTTTAAGAGCATCATCCATTTTCGTTTGGTGGGATCGATG
TCCTGGATGGCAGATGCCCAAGCATCTCCGATTGTCGCCAATGGTTCCTC
CCAGGGAGTCCGAGCTGGTAGGCTGGCAGTATCCACCACAAAATGGCATC
ATCATTATCGCTGACTCGTGTCATTTGGTGGCCCAATCATCGCTCATCAG
AAAATGAGGACAGATTTTGGGTCCATATCTTGGGGCAGGGGGTCACGGAA
GCTGAGCTCAAGCGTAAACACGGCGATCCGATCTTCTAGGTTTGGTTCCA
AAACCGGCGAGCCAAGTGTCGGAAGCACGAGAGCCAGCATTTCAAGTCGG
TGACAGCCACGCCCACTCCGATTGGGAACAATCCGGGGTGTGGGGCGGGG
CAGAATCTGTCCAGCATTGGAACACCCATCTCGGCCGTGCCTGGGAGTCG
GCTGGCTGGGCTTTTGCGATCGTCCAACGGCCCTATTCCACCCATGCAGT
CCGGGATGGGCGGGATCAAGAAGCCACCGTCGCCCTCGTCATCCCCAATG
AACGCCAGCGGGCCCCATGCCATGGACTTGTCTAGAGGAACGCCCCTTCC
CAAAGCCTCATTCACCGACCGACTCAAAGAGCACGCACTCAGAAGCTTTG
ATACCCACTCGAGGGCCCTCATTAGTGCTCAGCAGGTAACCATACCGACT
TTAATTTAATTTACTATGCAAGCAATCTAACCCAGACTTTATATGTACAT
TGAATCCAATTCGTATCTCGGTCTAAGTACTTAGTACTTCAAGTACTTCG
TGTACGAAGTAGTTCATGTTAACACCGAATAAGTTTGATGCTGTCAGCTG
TTGCAATTTGTTAGGAGTCAAGGAAGGCGCCAATTTTAAAATACAGTGGT
ACAAATTAAACCTTGCAACTTAGTTTAATAGAGGGTTGCAATGGAGTTAA
AACTTTGTTAAGCAATAGACAAGCTGTACAGGTATGACATATTGCAGAGA
TACCTGATAATTTGTAATGCCTATTCTCTAATTTCAGTACGCGGCAGTAG
CTGTGGCGGCTCTCAAAGGGTCAAATAATCCCTCTCCTTTCTTATCAGGG
CTGAGCAATTCTCTCCTTGTCAGTACTTTACTTCAAAATTCCAAGTTACC
CCATTCCACCAGCTCAGACACGCCCATTTTCCCACCATTTCCCTCGGCTC
TGTTCTCCAACTCCCACTCAAGTCTCGCCCCTCTGCCATTCCCATCCTCC
ATGCCAACCTTGAGGTTGGGACACCGAAGTGGGGGTGGTTCCAACGGGTT
GTCCCACGATCTGGCCTCCATGGACCCGTTCAAGTCGAAATCTTCAAGCA
TTGCAGACCTGCGGCTGAAAGCCAAACGCCACCAAGAAGCCTTGGGCATC
AGTGAGAGTGATTGA
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